CaUC11G207830 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC11G207830
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	DUF4228 domain-containing protein
Location	Ciama_Chr11: 8614415 .. 8614906 (+)
RNA-Seq Expression	CaUC11G207830
Synteny	CaUC11G207830

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTGGCTGTATTTCCCGCCGATCATCTTCCGCCGTCGCCGCCGCCGACAGAATCCAAGTTGTCCACCTCAGTGGCCAAGTACAACACTTCCACATCCCCATCACCGCCTGCCAGGTCGTCGGAAAGCCGTCCCCCTCGGCGGAGTACTTCATCTGCACGGCGGCACAGTTGGTCTCCCCCGCCGCCAGCCCAGCGCTGAGCCCCGACGCCATCCTGCAGCCGGGCAAAGTGTATTTTATTCTGCCGTTCTCCACTCTTCATCCCGACGTTTCTCCCGCCGACTTGGCCTGCATAGCCAGAAGGCTCACCGCCGCCGCCAAGTCCGCCGCGAAGACCGGCGCTCCGCCTCCGTGTGAGGCCACCGGTGGTGGCGACGATTTGAAGTGTCCGGCAGCGGCGAAGTCGAGGCAGTGGAGACCGTTGTTGGATACAATAACGGAAAAGCCGGCGAATAATTACCAGAGGATCGAATCAGATTCGGAAGATTAG

mRNA sequence

ATGGGTGGCTGTATTTCCCGCCGATCATCTTCCGCCGTCGCCGCCGCCGACAGAATCCAAGTTGTCCACCTCAGTGGCCAAGTACAACACTTCCACATCCCCATCACCGCCTGCCAGGTCGTCGGAAAGCCGTCCCCCTCGGCGGAGTACTTCATCTGCACGGCGGCACAGTTGGTCTCCCCCGCCGCCAGCCCAGCGCTGAGCCCCGACGCCATCCTGCAGCCGGGCAAAGTGTATTTTATTCTGCCGTTCTCCACTCTTCATCCCGACGTTTCTCCCGCCGACTTGGCCTGCATAGCCAGAAGGCTCACCGCCGCCGCCAAGTCCGCCGCGAAGACCGGCGCTCCGCCTCCGTGTGAGGCCACCGGTGGTGGCGACGATTTGAAGTGTCCGGCAGCGGCGAAGTCGAGGCAGTGGAGACCGTTGTTGGATACAATAACGGAAAAGCCGGCGAATAATTACCAGAGGATCGAATCAGATTCGGAAGATTAG

Coding sequence (CDS)

ATGGGTGGCTGTATTTCCCGCCGATCATCTTCCGCCGTCGCCGCCGCCGACAGAATCCAAGTTGTCCACCTCAGTGGCCAAGTACAACACTTCCACATCCCCATCACCGCCTGCCAGGTCGTCGGAAAGCCGTCCCCCTCGGCGGAGTACTTCATCTGCACGGCGGCACAGTTGGTCTCCCCCGCCGCCAGCCCAGCGCTGAGCCCCGACGCCATCCTGCAGCCGGGCAAAGTGTATTTTATTCTGCCGTTCTCCACTCTTCATCCCGACGTTTCTCCCGCCGACTTGGCCTGCATAGCCAGAAGGCTCACCGCCGCCGCCAAGTCCGCCGCGAAGACCGGCGCTCCGCCTCCGTGTGAGGCCACCGGTGGTGGCGACGATTTGAAGTGTCCGGCAGCGGCGAAGTCGAGGCAGTGGAGACCGTTGTTGGATACAATAACGGAAAAGCCGGCGAATAATTACCAGAGGATCGAATCAGATTCGGAAGATTAG

Protein sequence

MGGCISRRSSSAVAAADRIQVVHLSGQVQHFHIPITACQVVGKPSPSAEYFICTAAQLVSPAASPALSPDAILQPGKVYFILPFSTLHPDVSPADLACIARRLTAAAKSAAKTGAPPPCEATGGGDDLKCPAAAKSRQWRPLLDTITEKPANNYQRIESDSED

Homology

[Close]

BLAST of CaUC11G207830 vs. NCBI nr
Match: XP_011650123.1 (uncharacterized protein LOC105434722 [Cucumis sativus])

HSP 1 Score: 243.4 bits (620), Expect = 1.3e-60
Identity = 127/163 (77.91%), Postives = 137/163 (84.05%), Query Frame = 0


Query: 1   MGGCISRRSSS-AVAAADRIQVVHLSGQVQHFHIPITACQVVGKPSPSAEYFICTAAQLV 60
           MGGCIS RSSS A AAADR+QVVHL+G VQHFH PITA QV G+P P AEYFICTAAQLV
Sbjct: 1   MGGCISHRSSSTAAAAADRVQVVHLNGHVQHFHSPITARQVAGRPPPPAEYFICTAAQLV 60

Query: 61  SPAASPALSPDAILQPGKVYFILPFSTLHPDVSPADLACIARRLTAAAKSAAKTGAPPPC 120
           S AASPAL+PD +LQPGKVYFILP STLHPDVS ADLA IARRLTAAAKSAAK+G+ PPC
Sbjct: 61  STAASPALNPDVVLQPGKVYFILPLSTLHPDVSLADLASIARRLTAAAKSAAKSGSLPPC 120

Query: 121 EATGGGDDLKCPAAAKSRQWRPLLDTITEKPANNYQRIESDSE 163
           EA  GG+D +C  A KSRQWRPLLDTI EKP NN  RI+SD E
Sbjct: 121 EAADGGEDWRCTTAGKSRQWRPLLDTIREKPGNNCGRIDSDLE 163

[Close]

BLAST of CaUC11G207830 vs. NCBI nr
Match: XP_008460258.1 (PREDICTED: uncharacterized protein LOC103499134 [Cucumis melo] >KAA0031747.1 DUF4228 domain-containing protein [Cucumis melo var. makuwa] >TYK08883.1 DUF4228 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 241.5 bits (615), Expect = 5.0e-60
Identity = 127/162 (78.40%), Postives = 137/162 (84.57%), Query Frame = 0


Query: 1   MGGCISRRSSSAVAAADRIQVVHLSGQVQHFHIPITACQVVGKPSPSAEYFICTAAQLVS 60
           MGGC+S RSSS  AAADR+QVVHL+G VQHFH PITA QV  KP P  EYFICTAAQLVS
Sbjct: 1   MGGCVSLRSSSD-AAADRVQVVHLNGHVQHFHSPITARQVARKPPPPTEYFICTAAQLVS 60

Query: 61  PAASPALSPDAILQPGKVYFILPFSTLHPDVSPADLACIARRLTAAAKSAAKTGAPPPCE 120
            AASPAL PDA+LQPGKVYFILPFSTLHPDVS ADLA IARRLTAAAKSAAK+G+ PPCE
Sbjct: 61  TAASPALDPDAVLQPGKVYFILPFSTLHPDVSLADLASIARRLTAAAKSAAKSGSLPPCE 120

Query: 121 ATGGGDDLKCPAAAKSRQWRPLLDTITEKPANNYQRIESDSE 163
              GG++ KC AA KSRQWRPLLDTI EKPAN+ +RIESD E
Sbjct: 121 TAEGGEEWKCTAAGKSRQWRPLLDTIKEKPANSCERIESDLE 161

[Close]

BLAST of CaUC11G207830 vs. NCBI nr
Match: XP_022996489.1 (uncharacterized protein LOC111491721 [Cucurbita maxima])

HSP 1 Score: 220.7 bits (561), Expect = 9.2e-54
Identity = 119/163 (73.01%), Postives = 131/163 (80.37%), Query Frame = 0


Query: 1   MGGCISRRSSSAVAAADRIQVVHLSGQVQHFHIPITACQVVGKPSPSAEYFICTAAQLVS 60
           MG CISRRSSSAVAAAD IQ+VHL+G VQHFH PITA QV G   P AEYFI TAAQLVS
Sbjct: 1   MGVCISRRSSSAVAAADTIQLVHLNGHVQHFHSPITASQVTGNSPPPAEYFISTAAQLVS 60

Query: 61  PAASPALSPDAILQPGKVYFILPFSTLHPDVSPADLACIARRLTAAAKSAAKTGAPPPCE 120
            A SPAL+PDAILQPGKVYF+LPFSTLHPDVSP+DL+ IAR+LTAAAKSA +   PPPC 
Sbjct: 61  LAVSPALNPDAILQPGKVYFLLPFSTLHPDVSPSDLSSIARKLTAAAKSAPR---PPPCV 120

Query: 121 ATGGGDDLKCPAAAKSRQWRPLLDTITEKPANNYQRIESDSED 164
           A GGG+D K P AAKSRQW+P LDTI EK  N   + ESD +D
Sbjct: 121 AVGGGNDWKAPVAAKSRQWKPFLDTIQEKAVN---KSESDLQD 157

[Close]

BLAST of CaUC11G207830 vs. NCBI nr
Match: KAG7029841.1 (hypothetical protein SDJN02_08184, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 218.4 bits (555), Expect = 4.6e-53
Identity = 118/163 (72.39%), Postives = 129/163 (79.14%), Query Frame = 0


Query: 1   MGGCISRRSSSAVAAADRIQVVHLSGQVQHFHIPITACQVVGKPSPSAEYFICTAAQLVS 60
           MGGCISRRSSSAVAAAD IQ+VHL+G VQHFH PITA QV G   P AEYFI TAAQLVS
Sbjct: 1   MGGCISRRSSSAVAAADTIQLVHLNGHVQHFHSPITARQVTGSSPPPAEYFISTAAQLVS 60

Query: 61  PAASPALSPDAILQPGKVYFILPFSTLHPDVSPADLACIARRLTAAAKSAAKTGAPPPCE 120
            A SPAL+PDAILQPGKVYF+LPFSTLHPDVSP+DL+ IAR+LTAAAKSA +    PPC 
Sbjct: 61  LAVSPALNPDAILQPGKVYFLLPFSTLHPDVSPSDLSSIARKLTAAAKSAPR----PPCV 120

Query: 121 ATGGGDDLKCPAAAKSRQWRPLLDTITEKPANNYQRIESDSED 164
           A GGGD  K P  AKSRQW+P LDTI EK  N   + ESD +D
Sbjct: 121 AVGGGDGWKAPTTAKSRQWKPFLDTIQEKAVN---KSESDLQD 156

[Close]

BLAST of CaUC11G207830 vs. NCBI nr
Match: KAE8651677.1 (hypothetical protein Csa_021330 [Cucumis sativus])

HSP 1 Score: 215.7 bits (548), Expect = 3.0e-52
Identity = 110/142 (77.46%), Postives = 119/142 (83.80%), Query Frame = 0


Query: 21  VVHLSGQVQHFHIPITACQVVGKPSPSAEYFICTAAQLVSPAASPALSPDAILQPGKVYF 80
           VVHL+G VQHFH PITA QV G+P P AEYFICTAAQLVS AASPAL+PD +LQPGKVYF
Sbjct: 3   VVHLNGHVQHFHSPITARQVAGRPPPPAEYFICTAAQLVSTAASPALNPDVVLQPGKVYF 62

Query: 81  ILPFSTLHPDVSPADLACIARRLTAAAKSAAKTGAPPPCEATGGGDDLKCPAAAKSRQWR 140
           ILP STLHPDVS ADLA IARRLTAAAKSAAK+G+ PPCEA  GG+D +C  A KSRQWR
Sbjct: 63  ILPLSTLHPDVSLADLASIARRLTAAAKSAAKSGSLPPCEAADGGEDWRCTTAGKSRQWR 122

Query: 141 PLLDTITEKPANNYQRIESDSE 163
           PLLDTI EKP NN  RI+SD E
Sbjct: 123 PLLDTIREKPGNNCGRIDSDLE 144

[Close]

BLAST of CaUC11G207830 vs. ExPASy TrEMBL
Match: A0A0A0LHC0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G060490 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 6.4e-61
Identity = 127/163 (77.91%), Postives = 137/163 (84.05%), Query Frame = 0


Query: 1   MGGCISRRSSS-AVAAADRIQVVHLSGQVQHFHIPITACQVVGKPSPSAEYFICTAAQLV 60
           MGGCIS RSSS A AAADR+QVVHL+G VQHFH PITA QV G+P P AEYFICTAAQLV
Sbjct: 1   MGGCISHRSSSTAAAAADRVQVVHLNGHVQHFHSPITARQVAGRPPPPAEYFICTAAQLV 60

Query: 61  SPAASPALSPDAILQPGKVYFILPFSTLHPDVSPADLACIARRLTAAAKSAAKTGAPPPC 120
           S AASPAL+PD +LQPGKVYFILP STLHPDVS ADLA IARRLTAAAKSAAK+G+ PPC
Sbjct: 61  STAASPALNPDVVLQPGKVYFILPLSTLHPDVSLADLASIARRLTAAAKSAAKSGSLPPC 120

Query: 121 EATGGGDDLKCPAAAKSRQWRPLLDTITEKPANNYQRIESDSE 163
           EA  GG+D +C  A KSRQWRPLLDTI EKP NN  RI+SD E
Sbjct: 121 EAADGGEDWRCTTAGKSRQWRPLLDTIREKPGNNCGRIDSDLE 163

[Close]

BLAST of CaUC11G207830 vs. ExPASy TrEMBL
Match: A0A5D3CAJ8 (DUF4228 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1411G00050 PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 2.4e-60
Identity = 127/162 (78.40%), Postives = 137/162 (84.57%), Query Frame = 0


Query: 1   MGGCISRRSSSAVAAADRIQVVHLSGQVQHFHIPITACQVVGKPSPSAEYFICTAAQLVS 60
           MGGC+S RSSS  AAADR+QVVHL+G VQHFH PITA QV  KP P  EYFICTAAQLVS
Sbjct: 1   MGGCVSLRSSSD-AAADRVQVVHLNGHVQHFHSPITARQVARKPPPPTEYFICTAAQLVS 60

Query: 61  PAASPALSPDAILQPGKVYFILPFSTLHPDVSPADLACIARRLTAAAKSAAKTGAPPPCE 120
            AASPAL PDA+LQPGKVYFILPFSTLHPDVS ADLA IARRLTAAAKSAAK+G+ PPCE
Sbjct: 61  TAASPALDPDAVLQPGKVYFILPFSTLHPDVSLADLASIARRLTAAAKSAAKSGSLPPCE 120

Query: 121 ATGGGDDLKCPAAAKSRQWRPLLDTITEKPANNYQRIESDSE 163
              GG++ KC AA KSRQWRPLLDTI EKPAN+ +RIESD E
Sbjct: 121 TAEGGEEWKCTAAGKSRQWRPLLDTIKEKPANSCERIESDLE 161

[Close]

BLAST of CaUC11G207830 vs. ExPASy TrEMBL
Match: A0A1S3CC70 (uncharacterized protein LOC103499134 OS=Cucumis melo OX=3656 GN=LOC103499134 PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 2.4e-60
Identity = 127/162 (78.40%), Postives = 137/162 (84.57%), Query Frame = 0


Query: 1   MGGCISRRSSSAVAAADRIQVVHLSGQVQHFHIPITACQVVGKPSPSAEYFICTAAQLVS 60
           MGGC+S RSSS  AAADR+QVVHL+G VQHFH PITA QV  KP P  EYFICTAAQLVS
Sbjct: 1   MGGCVSLRSSSD-AAADRVQVVHLNGHVQHFHSPITARQVARKPPPPTEYFICTAAQLVS 60

Query: 61  PAASPALSPDAILQPGKVYFILPFSTLHPDVSPADLACIARRLTAAAKSAAKTGAPPPCE 120
            AASPAL PDA+LQPGKVYFILPFSTLHPDVS ADLA IARRLTAAAKSAAK+G+ PPCE
Sbjct: 61  TAASPALDPDAVLQPGKVYFILPFSTLHPDVSLADLASIARRLTAAAKSAAKSGSLPPCE 120

Query: 121 ATGGGDDLKCPAAAKSRQWRPLLDTITEKPANNYQRIESDSE 163
              GG++ KC AA KSRQWRPLLDTI EKPAN+ +RIESD E
Sbjct: 121 TAEGGEEWKCTAAGKSRQWRPLLDTIKEKPANSCERIESDLE 161

[Close]

BLAST of CaUC11G207830 vs. ExPASy TrEMBL
Match: A0A6J1K8V3 (uncharacterized protein LOC111491721 OS=Cucurbita maxima OX=3661 GN=LOC111491721 PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 4.5e-54
Identity = 119/163 (73.01%), Postives = 131/163 (80.37%), Query Frame = 0


Query: 1   MGGCISRRSSSAVAAADRIQVVHLSGQVQHFHIPITACQVVGKPSPSAEYFICTAAQLVS 60
           MG CISRRSSSAVAAAD IQ+VHL+G VQHFH PITA QV G   P AEYFI TAAQLVS
Sbjct: 1   MGVCISRRSSSAVAAADTIQLVHLNGHVQHFHSPITASQVTGNSPPPAEYFISTAAQLVS 60

Query: 61  PAASPALSPDAILQPGKVYFILPFSTLHPDVSPADLACIARRLTAAAKSAAKTGAPPPCE 120
            A SPAL+PDAILQPGKVYF+LPFSTLHPDVSP+DL+ IAR+LTAAAKSA +   PPPC 
Sbjct: 61  LAVSPALNPDAILQPGKVYFLLPFSTLHPDVSPSDLSSIARKLTAAAKSAPR---PPPCV 120

Query: 121 ATGGGDDLKCPAAAKSRQWRPLLDTITEKPANNYQRIESDSED 164
           A GGG+D K P AAKSRQW+P LDTI EK  N   + ESD +D
Sbjct: 121 AVGGGNDWKAPVAAKSRQWKPFLDTIQEKAVN---KSESDLQD 157

[Close]

BLAST of CaUC11G207830 vs. ExPASy TrEMBL
Match: W9QLQ9 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_016842 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 1.5e-22
Identity = 68/161 (42.24%), Postives = 96/161 (59.63%), Query Frame = 0


Query: 1   MGGCISRRSSSAVAAADRIQVVHLSGQVQHFHIPITACQVVGKPSPSAEYFICTAAQLVS 60
           MG C+S RSSS+      ++VVHL+G V+ F  P++   V GKP+   +YF+CT AQL+S
Sbjct: 1   MGSCLSCRSSSSELEFKAVRVVHLNGYVEDFEHPVSVSYVTGKPT---KYFVCTPAQLLS 60

Query: 61  PAASPALSPDAILQPGKVYFILPFSTLHPDVSPADLACIARRLTAAAKSAAKTG------ 120
               P + P+ +L+ GK+YF+LP+S L  DVSP DLA IAR+LTA AK+  +        
Sbjct: 61  CGTKP-MRPETLLERGKLYFLLPYSALQADVSPLDLASIARKLTALAKTVRRKPNKSPGR 120

Query: 121 -APPPCEATGGGDDLKCPA-----AAKSRQWRPLLDTITEK 150
            +P P +  G       PA     A + R W+P+LDTI E+
Sbjct: 121 FSPSPAQYGGSSPVWSSPARSPNRAVRERPWKPILDTIRER 157

[Close]

BLAST of CaUC11G207830 vs. TAIR 10
Match: AT1G76600.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G21010.1); Has 220 Blast hits to 220 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 220; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 61.6 bits (148), Expect = 6.7e-10
Identity = 35/118 (29.66%), Postives = 64/118 (54.24%), Query Frame = 0


Query: 1   MGGCISRRSSSAVAAADRIQVVHLSGQVQHFHIPITACQVV-------GKPSPSAEYFIC 60
           MG C+S   +  V+++   ++V ++G ++ + +P+ A QV+          S S+ YF+C
Sbjct: 1   MGLCVSVNRNEYVSSSTTAKIVTINGDLREYDVPVLASQVLESESTSSSSSSSSSSYFLC 60

Query: 61  TAAQLVSPAASPALSPDAILQPGKVYFILPFSTLHPDVSPADLACIARRLTAAAKSAA 112
            +  L      PA+  D ILQ  ++YF+LP S     +S +D+A +A + + A + AA
Sbjct: 61  NSDSLYYDDFIPAIESDEILQANQIYFVLPISKRQYRLSASDMAALAVKASVAIEKAA 118

The following BLAST results are available for this feature:

BLAST of CaUC11G207830 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011650123.1	1.3e-60	77.91	uncharacterized protein LOC105434722 [Cucumis sativus]	[more]
XP_008460258.1	5.0e-60	78.40	PREDICTED: uncharacterized protein LOC103499134 [Cucumis melo] >KAA0031747.1 DUF...	[more]
XP_022996489.1	9.2e-54	73.01	uncharacterized protein LOC111491721 [Cucurbita maxima]	[more]
KAG7029841.1	4.6e-53	72.39	hypothetical protein SDJN02_08184, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAE8651677.1	3.0e-52	77.46	hypothetical protein Csa_021330 [Cucumis sativus]	[more]

BLAST of CaUC11G207830 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CaUC11G207830 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LHC0	6.4e-61	77.91	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G060490 PE=4 SV=1	[more]
A0A5D3CAJ8	2.4e-60	78.40	DUF4228 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3CC70	2.4e-60	78.40	uncharacterized protein LOC103499134 OS=Cucumis melo OX=3656 GN=LOC103499134 PE=...	[more]
A0A6J1K8V3	4.5e-54	73.01	uncharacterized protein LOC111491721 OS=Cucurbita maxima OX=3661 GN=LOC111491721...	[more]
W9QLQ9	1.5e-22	42.24	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_016842 PE=4 SV=1	[more]

BLAST of CaUC11G207830 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G76600.1	6.7e-10	29.66	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 1..148 e-value: 7.8E-22 score: 78.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 141..163
None	No IPR available	PANTHER	PTHR33052	DUF4228 DOMAIN PROTEIN-RELATED	coord: 1..159
None	No IPR available	PANTHER	PTHR33052:SF2	OS06G0700300 PROTEIN	coord: 1..159

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC11G207830.1	CaUC11G207830.1	mRNA