CaUC11G204920 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGAAAGCAGAGAAACAGAAAAGCCGGGAAGAAATAATGTCCTGTTGGGAGCGTTTGAAGATGAAGATTTTGTCAAAAAATGGAGAGGGCAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATCTTTGTATGGGAGAGAGAAGCAGATTGAATAATAATAATAGGAGTGGGGGATTATTCAGATACGATCCATTAAGCTACGCTCAGAATTTCGACGAGGGATTGGCTAATGCAGATGAAGAAGGACCCTATCGAAGTTTTTCTGCAAGATATGCTGTTCCTTCCAAACCGCCAGCAAAGAAGTTAGAATAG ATGGAGAAAGCAGAGAAACAGAAAAGCCGGGAAGAAATAATGTCCTGTTGGGAGCGTTTGAAGATGAAGATTTTATACGATCCATTAAGCTACGCTCAGAATTTCGACGAGGGATTGGCTAATGCAGATGAAGAAGGACCCTATCGAAGTTTTTCTGCAAGATATGCTGTTCCTTCCAAACCGCCAGCAAAGAAGTTAGAATAG ATGGAGAAAGCAGAGAAACAGAAAAGCCGGGAAGAAATAATGTCCTGTTGGGAGCGTTTGAAGATGAAGATTTTATACGATCCATTAAGCTACGCTCAGAATTTCGACGAGGGATTGGCTAATGCAGATGAAGAAGGACCCTATCGAAGTTTTTCTGCAAGATATGCTGTTCCTTCCAAACCGCCAGCAAAGAAGTTAGAATAG MEKAEKQKSREEIMSCWERLKMKILYDPLSYAQNFDEGLANADEEGPYRSFSARYAVPSKPPAKKLE Homology
BLAST of CaUC11G204920 vs. NCBI nr
Match: KGN60281.1 (hypothetical protein Csa_002688 [Cucumis sativus]) HSP 1 Score: 98.2 bits (243), Expect = 2.8e-17 Identity = 56/101 (55.45%), Postives = 62/101 (61.39%), Query Frame = 0
BLAST of CaUC11G204920 vs. NCBI nr
Match: KAG6591707.1 (hypothetical protein SDJN03_14053, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 72.8 bits (177), Expect = 1.3e-09 Identity = 44/81 (54.32%), Postives = 51/81 (62.96%), Query Frame = 0
BLAST of CaUC11G204920 vs. NCBI nr
Match: KAG7024589.1 (hypothetical protein SDJN02_13407, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 71.6 bits (174), Expect = 2.8e-09 Identity = 44/82 (53.66%), Postives = 51/82 (62.20%), Query Frame = 0
BLAST of CaUC11G204920 vs. NCBI nr
Match: KAG6608120.1 (hypothetical protein SDJN03_01462, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 71.2 bits (173), Expect = 3.7e-09 Identity = 43/86 (50.00%), Postives = 49/86 (56.98%), Query Frame = 0
BLAST of CaUC11G204920 vs. NCBI nr
Match: KAG5034444.1 (hypothetical protein JHK87_009354 [Glycine soja]) HSP 1 Score: 61.6 bits (148), Expect = 2.9e-06 Identity = 32/61 (52.46%), Postives = 36/61 (59.02%), Query Frame = 0
BLAST of CaUC11G204920 vs. ExPASy TrEMBL
Match: A0A0A0LJR5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G893310 PE=4 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 1.4e-17 Identity = 56/101 (55.45%), Postives = 62/101 (61.39%), Query Frame = 0
BLAST of CaUC11G204920 vs. ExPASy TrEMBL
Match: A0A0B2RTQ8 (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_001296 PE=4 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 1.9e-06 Identity = 36/76 (47.37%), Postives = 43/76 (56.58%), Query Frame = 0
BLAST of CaUC11G204920 vs. ExPASy TrEMBL
Match: K7K3E9 (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_01G122400 PE=4 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 1.9e-06 Identity = 36/76 (47.37%), Postives = 43/76 (56.58%), Query Frame = 0
BLAST of CaUC11G204920 vs. ExPASy TrEMBL
Match: K7KJ14 (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_04G090800 PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 3.2e-06 Identity = 36/76 (47.37%), Postives = 42/76 (55.26%), Query Frame = 0
BLAST of CaUC11G204920 vs. ExPASy TrEMBL
Match: A0A445KYI8 (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_009209 PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 3.2e-06 Identity = 36/76 (47.37%), Postives = 42/76 (55.26%), Query Frame = 0
BLAST of CaUC11G204920 vs. TAIR 10
Match: AT3G01430.1 (BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:AT5G14890.1); Has 98 Blast hits to 98 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 44.7 bits (104), Expect = 3.5e-05 Identity = 22/45 (48.89%), Postives = 29/45 (64.44%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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