CaUC11G204850 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC11G204850
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionHydroxyproline-rich glycoprotein
LocationCiama_Chr11: 4384491 .. 4385815 (-)
RNA-Seq ExpressionCaUC11G204850
SyntenyCaUC11G204850
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTAATATATTTTGTCCATAAATTTATTAAATCGTTGGCAGTGGGCATAGGCAAAGAAAGTAAAAATGGAGTATGATAATCGCGAAGGACTAGGACAGGATCCGGCGTCTCTAAGCTTTCCAGTTGGTTTAGTTCTTTTATTGACATTTTTGTTCTGCATGTGTTGTTTCTTTTCTTGTTGTCTTCACTGGGAAAAGCTCCGATCATTTCTTGGTTGTCCCGATCATCTCCTCCACCACCACCACCCTCCTATTCCGCCGCAAACCGCCCATAAATTTTCCCCAATCCATACGGTGCCTTTTCTTCCTTCTTTTTCCATTTTTACCCTTTTATTTTTTATTTTCAATATTTCTCAATTTAACCTTCAATTGAATTACAAAAATACATCAATTTATTTCACCGCCAACTCTTTGTTCTACCTATGGGATTTTCACAAATTTTAATTTTCTTTACATTAATTTTTTGTTTTCTTAAATATGCTAGCTTAAGTTATTATTTAAAAGTTCATATTATAGTAATTTAACAGAGTTAAGGAAAGATTTGGGTTTTCTTTGTTTCCTTTTTTCTTTTTCTTTTTTATTATTGTTATTTGAAAAGATAAAGATTTTGGTTATTAGTTTTTGCAATTCTACAATATGATAACCTTTTGATTTTTAAAATAAAATAAGAGTTAAATTTATAATCTCTATGGATTTTTTTTTTTTAACAATATTTTTAGGATGTGATTGTAAAAAATATATGCAACTCAATTTACATGCAATATTTGTTATTTAAAAAAATAAATATGAATTTTTTTATAAAAAAATTGTTAAGAATTTCACTAAAAATTCAAAAAAAAAAAATTTAAAGAACACAAACCATTGAAAGAAACACAAATTTCAAAATATGAAACAATCGGATTTATTATTATTATTTTAATTTTACTTTCTTGAACGATTATTAAATGTGTACTCTGTTTGATCTTTCCTTCATCTCTTATTTTCTCAAAAGAAGATATGGAAGGAGAATCGGCCGCAAAGCCTGTCGGTGTTGATGCCCGGCGATGAGGTTCCAAGGTTTATAGCAATGGAATGTCCGCCGTGTACGGCGGCGGCGTTGGTCGAAATTGTAGTACAAAAACCTTCACAGAGTCTTCCGAATTCTTCTCTATAGCTCTCTCTTTAATTAATTAATGCCTTTTTTTTTTGTAAGCTTTTTGTGCGTATATAATTGTAATATTTATATGTCCATTTGAATATTCCATTATTTCTTTGGAATTTCTAGCAATGTTCAAATGTTTATGTTTGTTTTGTGAGTTCGTCACTTTAATTTTATTCCTTTTCCG

mRNA sequence

ATTTAATATATTTTGTCCATAAATTTATTAAATCGTTGGCAGTGGGCATAGGCAAAGAAAGTAAAAATGGAGTATGATAATCGCGAAGGACTAGGACAGGATCCGGCGTCTCTAAGCTTTCCAGTTGGTTTAGTTCTTTTATTGACATTTTTGTTCTGCATGTGTTGTTTCTTTTCTTGTTGTCTTCACTGGGAAAAGCTCCGATCATTTCTTGGTTGTCCCGATCATCTCCTCCACCACCACCACCCTCCTATTCCGCCGCAAACCGCCCATAAATTTTCCCCAATCCATACGAAGATATGGAAGGAGAATCGGCCGCAAAGCCTGTCGGTGTTGATGCCCGGCGATGAGGTTCCAAGGTTTATAGCAATGGAATGTCCGCCGTGTACGGCGGCGGCGTTGGTCGAAATTGTAGTACAAAAACCTTCACAGAGTCTTCCGAATTCTTCTCTATAGCTCTCTCTTTAATTAATTAATGCCTTTTTTTTTTGTAAGCTTTTTGTGCGTATATAATTGTAATATTTATATGTCCATTTGAATATTCCATTATTTCTTTGGAATTTCTAGCAATGTTCAAATGTTTATGTTTGTTTTGTGAGTTCGTCACTTTAATTTTATTCCTTTTCCG

Coding sequence (CDS)

ATGGAGTATGATAATCGCGAAGGACTAGGACAGGATCCGGCGTCTCTAAGCTTTCCAGTTGGTTTAGTTCTTTTATTGACATTTTTGTTCTGCATGTGTTGTTTCTTTTCTTGTTGTCTTCACTGGGAAAAGCTCCGATCATTTCTTGGTTGTCCCGATCATCTCCTCCACCACCACCACCCTCCTATTCCGCCGCAAACCGCCCATAAATTTTCCCCAATCCATACGAAGATATGGAAGGAGAATCGGCCGCAAAGCCTGTCGGTGTTGATGCCCGGCGATGAGGTTCCAAGGTTTATAGCAATGGAATGTCCGCCGTGTACGGCGGCGGCGTTGGTCGAAATTGTAGTACAAAAACCTTCACAGAGTCTTCCGAATTCTTCTCTATAG

Protein sequence

MEYDNREGLGQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSFLGCPDHLLHHHHPPIPPQTAHKFSPIHTKIWKENRPQSLSVLMPGDEVPRFIAMECPPCTAAALVEIVVQKPSQSLPNSSL
Homology
[Close]
BLAST of CaUC11G204850 vs. NCBI nr
Match: XP_038899315.1 (uncharacterized protein At5g65660-like [Benincasa hispida])

HSP 1 Score: 238.8 bits (608), Expect = 2.6e-59
Identity = 118/134 (88.06%), Postives = 120/134 (89.55%), Query Frame = 0 

Query: 1   MEYDNREGLGQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSFLGCPDHLLHHHH 60
           MEYDNRE   QDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSFLGCPDH LHHHH
Sbjct: 1   MEYDNRE--AQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSFLGCPDH-LHHHH 60

Query: 61  PPIPPQTA-----HKFSPIHTKIWKENRPQSLSVLMPGDEVPRFIAMECPPCTAAALVEI 120
           PPIPPQTA      K SPIHTKIW+ENRPQSLSVLMPGDEVPRFIAM CPPC AAALVEI
Sbjct: 61  PPIPPQTAAFSPPDKISPIHTKIWRENRPQSLSVLMPGDEVPRFIAMACPPCAAAALVEI 120

Query: 121 VVQKPSQSLPNSSL 130
           VVQKPSQS P+SSL
Sbjct: 121 VVQKPSQSFPDSSL 131

[Close]
BLAST of CaUC11G204850 vs. NCBI nr
Match: XP_008466113.1 (PREDICTED: uncharacterized protein At5g65660-like [Cucumis melo] >KAA0038642.1 uncharacterized protein E6C27_scaffold92G001760 [Cucumis melo var. makuwa] >TYK31243.1 uncharacterized protein E5676_scaffold455G005320 [Cucumis melo var. makuwa])

HSP 1 Score: 217.2 bits (552), Expect = 8.1e-53
Identity = 112/138 (81.16%), Postives = 116/138 (84.06%), Query Frame = 0 

Query: 1   MEYDNREGLGQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSFLGCPDHLLHHHH 60
           MEYDNRE   QDPASLSFPVGLVLLLTFLFCMCCFF CCLHWEKLRSFLGCPDH LHHHH
Sbjct: 1   MEYDNRE--AQDPASLSFPVGLVLLLTFLFCMCCFFCCCLHWEKLRSFLGCPDH-LHHHH 60

Query: 61  PPIPP-------QTAHKFSPIHTKIWKENRPQSLSVLMPGDEVPRFIAMECPPC--TAAA 120
           PPIPP           KFSPIHT IWKENRPQS+SVLMPGDEVPRFIA+ CPPC   AAA
Sbjct: 61  PPIPPPHSPAALSPPDKFSPIHT-IWKENRPQSVSVLMPGDEVPRFIALACPPCATAAAA 120

Query: 121 LVEIVVQKPSQSLPNSSL 130
           LVEIVVQKPSQS+ +SSL
Sbjct: 121 LVEIVVQKPSQSISDSSL 134

[Close]
BLAST of CaUC11G204850 vs. NCBI nr
Match: KAG6591711.1 (hypothetical protein SDJN03_14057, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024594.1 hypothetical protein SDJN02_13412 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 201.8 bits (512), Expect = 3.5e-48
Identity = 102/129 (79.07%), Postives = 108/129 (83.72%), Query Frame = 0 

Query: 1   MEYDNREGLGQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSFLGCPDHLLHHHH 60
           MEYD+RE   QD ASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRS LGCPDH   H H
Sbjct: 1   MEYDDRE--AQDSASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSILGCPDH-ADHRH 60

Query: 61  PPIPPQT-----AHKFSPIHTKIWKENRPQSLSVLMPGDEVPRFIAMECPPCTAAALVEI 120
           P IPP+T       KFSPIHT IWKENRP+SL+VLMPGDEVPRFIAM CPPC AA LVEI
Sbjct: 61  PSIPPETPAFSPPDKFSPIHT-IWKENRPESLTVLMPGDEVPRFIAMACPPCGAAPLVEI 120

Query: 121 VVQKPSQSL 125
           V+QKPSQS+
Sbjct: 121 VIQKPSQSI 125

[Close]
BLAST of CaUC11G204850 vs. NCBI nr
Match: XP_022936981.1 (uncharacterized protein At5g65660-like [Cucurbita moschata])

HSP 1 Score: 201.8 bits (512), Expect = 3.5e-48
Identity = 102/129 (79.07%), Postives = 108/129 (83.72%), Query Frame = 0 

Query: 1   MEYDNREGLGQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSFLGCPDHLLHHHH 60
           MEYD+RE   QD ASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRS LGCPDH   H H
Sbjct: 1   MEYDDRE--AQDSASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSILGCPDH-ADHRH 60

Query: 61  PPIPPQT-----AHKFSPIHTKIWKENRPQSLSVLMPGDEVPRFIAMECPPCTAAALVEI 120
           P IPP+T       KFSPIHT IWKENRP+SL+VLMPGDEVPRFIAM CPPC AA LVEI
Sbjct: 61  PSIPPETPAFSPPDKFSPIHT-IWKENRPESLTVLMPGDEVPRFIAMACPPCGAAPLVEI 120

Query: 121 VVQKPSQSL 125
           V+QKPSQS+
Sbjct: 121 VIQKPSQSI 125

[Close]
BLAST of CaUC11G204850 vs. NCBI nr
Match: XP_023536259.1 (uncharacterized protein At5g65660-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 201.4 bits (511), Expect = 4.6e-48
Identity = 102/129 (79.07%), Postives = 107/129 (82.95%), Query Frame = 0 

Query: 1   MEYDNREGLGQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSFLGCPDHLLHHHH 60
           MEYD+RE   QD ASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRS LGCPDH   H H
Sbjct: 1   MEYDDRE--AQDSASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSILGCPDH-ADHRH 60

Query: 61  PPIPPQT-----AHKFSPIHTKIWKENRPQSLSVLMPGDEVPRFIAMECPPCTAAALVEI 120
           P IPP+T       KFSPIHT IWKENRP SL+VLMPGDEVPRFIAM CPPC AA LVEI
Sbjct: 61  PSIPPETPAFSPPDKFSPIHT-IWKENRPASLTVLMPGDEVPRFIAMACPPCVAAPLVEI 120

Query: 121 VVQKPSQSL 125
           V+QKPSQS+
Sbjct: 121 VIQKPSQSI 125

[Close]
BLAST of CaUC11G204850 vs. ExPASy Swiss-Prot
Match: Q9LSK9 (Uncharacterized protein At5g65660 OS=Arabidopsis thaliana OX=3702 GN=At5g65660 PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 3.7e-08
Identity = 46/120 (38.33%), Postives = 59/120 (49.17%), Query Frame = 0 

Query: 15  SLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSFL-----GCPD-HLLHHHHPPIPPQTA 74
           SL FP+G  LLL  +F +   FSCC HW+K RS       G P   +  + + P PP   
Sbjct: 18  SLGFPLGTALLLIIIFSLSGIFSCCYHWDKHRSLRRSLANGRPSADIESNPYKPKPPFPE 77

Query: 75  HKFSPIHTKIWKENRPQSLS--VLMPGDEVPRFIAMECPPC-TAAALVEIVVQKPSQSLP 126
            K            +PQ+LS  VLMPGD  P+FIA+ CP        + + VQ P QS P
Sbjct: 78  MK------------KPQNLSVPVLMPGDNTPKFIALPCPCAPPRPEKLTVDVQTPPQSPP 125

[Close]
BLAST of CaUC11G204850 vs. ExPASy TrEMBL
Match: A0A5D3E545 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G005320 PE=4 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 3.9e-53
Identity = 112/138 (81.16%), Postives = 116/138 (84.06%), Query Frame = 0 

Query: 1   MEYDNREGLGQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSFLGCPDHLLHHHH 60
           MEYDNRE   QDPASLSFPVGLVLLLTFLFCMCCFF CCLHWEKLRSFLGCPDH LHHHH
Sbjct: 1   MEYDNRE--AQDPASLSFPVGLVLLLTFLFCMCCFFCCCLHWEKLRSFLGCPDH-LHHHH 60

Query: 61  PPIPP-------QTAHKFSPIHTKIWKENRPQSLSVLMPGDEVPRFIAMECPPC--TAAA 120
           PPIPP           KFSPIHT IWKENRPQS+SVLMPGDEVPRFIA+ CPPC   AAA
Sbjct: 61  PPIPPPHSPAALSPPDKFSPIHT-IWKENRPQSVSVLMPGDEVPRFIALACPPCATAAAA 120

Query: 121 LVEIVVQKPSQSLPNSSL 130
           LVEIVVQKPSQS+ +SSL
Sbjct: 121 LVEIVVQKPSQSISDSSL 134

[Close]
BLAST of CaUC11G204850 vs. ExPASy TrEMBL
Match: A0A1S3CQS4 (uncharacterized protein At5g65660-like OS=Cucumis melo OX=3656 GN=LOC103503633 PE=4 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 3.9e-53
Identity = 112/138 (81.16%), Postives = 116/138 (84.06%), Query Frame = 0 

Query: 1   MEYDNREGLGQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSFLGCPDHLLHHHH 60
           MEYDNRE   QDPASLSFPVGLVLLLTFLFCMCCFF CCLHWEKLRSFLGCPDH LHHHH
Sbjct: 1   MEYDNRE--AQDPASLSFPVGLVLLLTFLFCMCCFFCCCLHWEKLRSFLGCPDH-LHHHH 60

Query: 61  PPIPP-------QTAHKFSPIHTKIWKENRPQSLSVLMPGDEVPRFIAMECPPC--TAAA 120
           PPIPP           KFSPIHT IWKENRPQS+SVLMPGDEVPRFIA+ CPPC   AAA
Sbjct: 61  PPIPPPHSPAALSPPDKFSPIHT-IWKENRPQSVSVLMPGDEVPRFIALACPPCATAAAA 120

Query: 121 LVEIVVQKPSQSLPNSSL 130
           LVEIVVQKPSQS+ +SSL
Sbjct: 121 LVEIVVQKPSQSISDSSL 134

[Close]
BLAST of CaUC11G204850 vs. ExPASy TrEMBL
Match: A0A6J1F906 (uncharacterized protein At5g65660-like OS=Cucurbita moschata OX=3662 GN=LOC111443410 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.7e-48
Identity = 102/129 (79.07%), Postives = 108/129 (83.72%), Query Frame = 0 

Query: 1   MEYDNREGLGQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSFLGCPDHLLHHHH 60
           MEYD+RE   QD ASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRS LGCPDH   H H
Sbjct: 1   MEYDDRE--AQDSASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSILGCPDH-ADHRH 60

Query: 61  PPIPPQT-----AHKFSPIHTKIWKENRPQSLSVLMPGDEVPRFIAMECPPCTAAALVEI 120
           P IPP+T       KFSPIHT IWKENRP+SL+VLMPGDEVPRFIAM CPPC AA LVEI
Sbjct: 61  PSIPPETPAFSPPDKFSPIHT-IWKENRPESLTVLMPGDEVPRFIAMACPPCGAAPLVEI 120

Query: 121 VVQKPSQSL 125
           V+QKPSQS+
Sbjct: 121 VIQKPSQSI 125

[Close]
BLAST of CaUC11G204850 vs. ExPASy TrEMBL
Match: A0A6J1IEI5 (uncharacterized protein At5g65660-like OS=Cucurbita maxima OX=3661 GN=LOC111476516 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 4.9e-48
Identity = 102/129 (79.07%), Postives = 108/129 (83.72%), Query Frame = 0 

Query: 1   MEYDNREGLGQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSFLGCPDHLLHHHH 60
           MEYD+RE   QD ASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRS LGCPDH   H H
Sbjct: 1   MEYDDRE--AQDSASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSILGCPDH-SDHLH 60

Query: 61  PPIPPQT-----AHKFSPIHTKIWKENRPQSLSVLMPGDEVPRFIAMECPPCTAAALVEI 120
           P IPP+T       KFSPIHT IWKENRP+SL+VLMPGDEVPRFIAM CPPC AA LVEI
Sbjct: 61  PSIPPETPAFSPPDKFSPIHT-IWKENRPESLTVLMPGDEVPRFIAMACPPCGAAPLVEI 120

Query: 121 VVQKPSQSL 125
           V+QKPSQS+
Sbjct: 121 VIQKPSQSI 125

[Close]
BLAST of CaUC11G204850 vs. ExPASy TrEMBL
Match: A0A6J1CGJ4 (uncharacterized protein At5g65660-like OS=Momordica charantia OX=3673 GN=LOC111011330 PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 8.5e-40
Identity = 90/137 (65.69%), Postives = 101/137 (73.72%), Query Frame = 0 

Query: 1   MEYDNREGLGQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSFLGCPDHLLHHHH 60
           M+YD+RE   QDPASLSFPVGLVLLLTF FCMCCFFSCCLHW+KLRSFLGCPD   H H 
Sbjct: 1   MDYDDRE--AQDPASLSFPVGLVLLLTFFFCMCCFFSCCLHWDKLRSFLGCPD---HRHP 60

Query: 61  PPIPPQTA-----HKFSPIHTKIWKENRPQSLSVLMPGDEVPRFIAMECPPCTAAA---- 120
           PPIPP+ A      K  P+HT     N+ QSL V+MPGDE PRFIAM CPPC AA     
Sbjct: 61  PPIPPENAASSPPDKILPLHT-----NQSQSLPVVMPGDEFPRFIAMACPPCAAAVAAAP 120

Query: 121 LVEIVVQKPSQSLPNSS 129
            V+++VQKP QS P+SS
Sbjct: 121 FVDVLVQKPPQSTPDSS 127

[Close]
BLAST of CaUC11G204850 vs. TAIR 10
Match: AT5G65660.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 59.3 bits (142), Expect = 2.6e-09
Identity = 46/120 (38.33%), Postives = 59/120 (49.17%), Query Frame = 0 

Query: 15  SLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRSFL-----GCPD-HLLHHHHPPIPPQTA 74
           SL FP+G  LLL  +F +   FSCC HW+K RS       G P   +  + + P PP   
Sbjct: 18  SLGFPLGTALLLIIIFSLSGIFSCCYHWDKHRSLRRSLANGRPSADIESNPYKPKPPFPE 77

Query: 75  HKFSPIHTKIWKENRPQSLS--VLMPGDEVPRFIAMECPPC-TAAALVEIVVQKPSQSLP 126
            K            +PQ+LS  VLMPGD  P+FIA+ CP        + + VQ P QS P
Sbjct: 78  MK------------KPQNLSVPVLMPGDNTPKFIALPCPCAPPRPEKLTVDVQTPPQSPP 125

The following BLAST results are available for this feature:
BLAST of CaUC11G204850 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038899315.12.6e-5988.06uncharacterized protein At5g65660-like [Benincasa hispida][more]
XP_008466113.18.1e-5381.16PREDICTED: uncharacterized protein At5g65660-like [Cucumis melo] >KAA0038642.1 u... [more]
KAG6591711.13.5e-4879.07hypothetical protein SDJN03_14057, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022936981.13.5e-4879.07uncharacterized protein At5g65660-like [Cucurbita moschata][more]
XP_023536259.14.6e-4879.07uncharacterized protein At5g65660-like [Cucurbita pepo subsp. pepo][more]
BLAST of CaUC11G204850 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9LSK93.7e-0838.33Uncharacterized protein At5g65660 OS=Arabidopsis thaliana OX=3702 GN=At5g65660 P... [more]
BLAST of CaUC11G204850 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3E5453.9e-5381.16Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3CQS43.9e-5381.16uncharacterized protein At5g65660-like OS=Cucumis melo OX=3656 GN=LOC103503633 P... [more]
A0A6J1F9061.7e-4879.07uncharacterized protein At5g65660-like OS=Cucurbita moschata OX=3662 GN=LOC11144... [more]
A0A6J1IEI54.9e-4879.07uncharacterized protein At5g65660-like OS=Cucurbita maxima OX=3661 GN=LOC1114765... [more]
A0A6J1CGJ48.5e-4065.69uncharacterized protein At5g65660-like OS=Momordica charantia OX=3673 GN=LOC1110... [more]
BLAST of CaUC11G204850 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G65660.12.6e-0938.33hydroxyproline-rich glycoprotein family protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR037699Uncharacterized protein At5g65660-likePANTHERPTHR34291HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEINcoord: 12..123
NoneNo IPR availablePANTHERPTHR34291:SF7PROTEIN, PUTATIVE-RELATEDcoord: 12..123

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC11G204850.1CaUC11G204850.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane