CaUC11G203640 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC11G203640
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
LocationCiama_Chr11: 3058738 .. 3067109 (+)
RNA-Seq ExpressionCaUC11G203640
SyntenyCaUC11G203640
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTGGTTTATTAATCTATAGAGAGCACTTCTGAAGCGAAATCGTTGAATCTTCATCGTTGAAAGAGGTGCAAAAGGGGAGGATGTTTTCATTTTGTGGAATCTGTGTTTTTGGCTTATTGCTTTAATTTAAAGAAAGCAGGGCATGCACGTTCTTGATTCTGCCATGTAGAATATTTCTCTTATGACCTGCTTTAGCAAAATTCAACAGTTTTCTCAGCCATCATAAGGCAATTCGTCGTCTGAATGTCGTTCGCTTTTTTGTCCTCCTGCTCCTAAAAAATTGTATTTGATTATTAGATTTGCAAAACATTTTGAGGAACAAATAGTATTTTGCACATTTTAGATTTTGTAATGCGGCAATTTCTTTCGCTCAAGTTTTAGAGGAATGAGTAGATTTTGTTATATTACAAGATTTGTGTTCGTTTTATTTATTTTCTTCTTTTTCTCAAACTTCTTTTTTCAGATAATCCTTTTTGAGCATTTTATCTCTGAAAGTTTGAGTTGTATTGGCTTTTTGTAATGTTTTGTCAATTAGGATAAATTATGCTGTGAAATTTGGGGATGTGATACAAATTTAGGTACCAAAACATATTATGTCATTCTTGATTTATCTTCTTTGGAAATTTTAAATAGGCCTTCTGTTTTTTGAGAGAATGAATAAAGTTGTGCTTAGAAATTTAGGAAGTATCCTTAAAAGATAAAAAAGAGGGGGAAGGAATATTATTAAATATGACTATTACAATATAGTTGTCTTTTAATAACCACTCAATGAGATAATTTGTTAAAAGACCTGATCTTAGAATGAGATAATTTGTTAAAAGATCTTAGACCTCAAAATGATTTTTGCCACACTTTTTCAAACGTTTACCCTCTTGCTTGCATCATCTCATCATGAGCTTAAGCTACAAAACTACCCTTAGTTTTCTTTCTTTCCTCTTCCTATTGTTTTTCTTCTCCAATTTGTCTCGGATAGTCTTCATTTTTCCTTTCTGTTTGTTGCCGACCATTAGAATATTGCAAAAGTATTGTCGTTGGCCATCAGAACATTGCTTGGAACATTAGCTGCAATGGAGTGACATAACTGAGAGAGAAGGAGAGAGAGGTTAAGAAAGCGAGGAGTTCGAGAGCATGAGAGAGCTTGAGTGCGAGAGAGAGGAAATAGAGAAAAGAAGAGGTTGAGAGAATGAGAGTTCGATAGAGCGAGGGCTAATCTACATGTGTGAGGGTTCTATTTTGATAATTTCACTCGACTGAGACATTAATAAAGGATCAAAATCTTAAATTCATAGTCTGGATAATTTTCATTTTCTCTTATTTTGGGTCATCCATCTCCTAGACCATATTACTAGAAACACTATAAAAGAAAAAAGAAAAAAAAAACACTACACAAAAAAAGTTCAACACATGTTTTTTATTTTTTTGGACAATAAATTGGTTGTTGAATGTGGAAATTGATGTGTTTTCTAGCTCATAGTCGATAGATTAAAAGTGCTTGAAATCTATCAAATAGAATAAATCATTCATCCTTTGTGAAACATTGAGCATTTTACTTCCCTTTCTCTTTATTTGAGTGTACAAAGTCAAAACTTCCCCTCATTTAGAGAGCATATATCATCTTTCTTTTTGAGCTTACAGATACAACTTTTTTCCATCTTACATAAATAACAAGTCTCCTCACCTACAAGAACGAGTGGGAACTAAATTAAATCTATCCGTATTCTTTCAACTCTATTGTAAATCTGTGATCCATAAGAACACAAATTAAAAAGGTAGCCTCGACTTCGACCTCCATTAATCCCAACTAAGACTCTGCTTTGAATTCCTCACAGAGTCATAAATAAAACATCCTTGAGAAATTGTCTTCGTTTCCTCTAGATTTATATAAATGCTCACATCATTGACCTTATAAAGGAGGTCGATCTTCCTCGGGCGTTCGAGGTGGGTGTGGTTTCCAATCAGGTTTCTCATCCCAGTACATGTCATAATATATGTGGCCAGGAGTTGCATTCTCCACACAACACCATATGCCAATGTAACGCTTGACTCGGTTCCTGAACTTCTCTTCCCTTTTCTGTAATCAAATTGTAGTTCATGTTATGAGACTTGCCATAATTTCTTAGTTTGTCAAATGAATCAAAAGGGGTTTGTTATTGTTACCTTATCAGAGAAACCATGGAAGGCATCTTGCATTGTGGAGAACTGGATGACTTTGACATCCTTGAAGGTGGAAAATATTGCTTTGAACTTTACAACAAAAATATGAAATATAACACAGTAAGTCCAATGGAGAGATGGACTTATTATTATTTATAGGTTTATATAGCTAACTTACAACAAGCAATAGGGGATTCCTAGAATTCATTATTAACAGATGTATGAAGCAAACCAGAACAACGATTTTATATATTTTAAGAAAAAATACCCTTTTGGTCCATAAGTTTTAAGACTGGTTTCCATTTGGTCCTTAGGTTTCAAAATGTTACACATTTAGTCCTTGAAGTTTCAAGTTTGGTTTCAATTAGTTCATAGGTTTCAAAATGTTACAATTTTACCTTTGAGATTTGAGTTTTGTTTCAATCTTGTCCCTAAATTCTAAAATGTACTCTTTTAGGCTCGATTTTTCATTAAATACTTACTTTTCATCTTTATTGTTAATCTCTATTAAATAATTCAAAAGAATTAAAAGAATCATAACTAATTAAGTCTCAATATTTTTCATCACTATATAAATTTCACTTCATAATTCTTTAAATTAATTAATAGGCATAACCCTAATGATTGAAAGTAAGTAATCAATGAAAAATATATGTTAAAAGTGTAAATCTTGAAATCTAGGAACCAAATTGAAACAAAACTCAGATCTTAAGTTTACTTGAAACATTTTGGAACCTAGGACAAAATTGAAACCAATCTCAAAACTTAAGGACTAAATTTGTAACATTTTGAAATCTTGTGACAAATGGAAACTAAACCTAAAACTTAAGGACTAAAAATGTATTTTCCCCCAATTTTTATTTACCAACATAAAGTAGCACGTCGATTAATATTAAAACATCGGAACCTTTTGGGAAAGATAAGTTTTTGTTTTACTTTTTATTAGGGTGAACTTTGAGCAGTAAAATGGTCAAATGTAAAAGAAAAATGCCAATTACCATATCTTCATTGCTGCCTTTAGGAAATTTGAGGACACCTGGTAGTACTGTATCATTTGATGCATGACAATCTTCACTTTCTTGTTTACAAAGCTGAACATCAAGCCATGATTCTTTCACCTAAACACATATTAACAGTTCCTCAACAAATGCTATTTTGTTCGTATCGAAAATTCAGAACTAGAGATCAGCCAAACTGATTAATTAAGGGTGTGCTTGAAATACCTTTTCAAGTGTTCAATTTAAAAAATGGAATCCATTAGTGTCTTTATTTTAAAAAGTTCTTATCAAAAGTGTATAAATGAAAATGAATTTTTGAAAATATTTATTTTTTAAGTTAATCTAAACAAGCCCTACTAACCTGTTTTGGGAGCAACGGATTTTCCAAGAAAGAATACTCTCTAAAGTTGATTCCTGGGCCAAACTCTTCCTCTGGTAATTCTTTTAACATCACATTGACCTGCTTGGCATAAAAATGAAGAAAAAGAAAATTAAAATTAAAATAAGTGCATTCTTTGTTTATCAAATCTTATGTATTATGAGCATTAGTCTCTTTTCATTTACTTAATGAAAAGTATCCTTTTCAAAAGAAAAGAAAAGAAAAATCTCATGTCTTTAATGCATGTGTTGCAGAAAATGTACGACTACATAAATGAATACCTCTCCACCTCATTAGGGATCTCTATGGGTCAAGATCGAGATGAATAAAAGATAATTGGGCACTAAAGTTATTATGGTCCCCAATAATTCAAAGGAAAAAAATATTTTAAGCACCATATAAGAAACACACTGATCATCCCTATGATGATAATTTGCATGAATTGGTATGATACTGAGTGCAAACTTGGATACCACTAGGCATAGTTGATTTCACATTGGTCAAAAGGGGTGGGAGAAAGATCCTTGAATGTATTAAAAAGGGAAAAGAATGTCAATCTTCCCATAGCTTGTGGAATAAGAAACTAATGAAAGTTCAATTCTCTATCTCCATATTTGATGAATTCAAGGAAAAAAAAACTTATAAATATATATACTCTGCTATATCTGTACAAACTAAGCTCAAACCGTTAGGTAACGAGTGTAGTTCTTAATGATAAGAATGTTACGAGATCAGTGTGCAATAAATATACGATCACTTTTTTACTCATTGGGTCCAGAGGGCCAATCATTAGTCTCTAGTTTCCAACCAATCCCAGAAACAAAGAAAGCTTCAGCATCACATTTGAAGTCGACCAGAAAGGTTTAAGCCCGGATATTTGTGGACATAACTTCAATCTAATCCTTAGAACTCAAGGGCACAATTGTACAACCGATCCTGTTCAAATAAGGTCATACCTCAATCTAATCCGTATGTTAACTGTTTGTGTGAGAGCCCTAGTTAGAGATATAGTAGGATTATTAGTAGAATATTAGTATGGTATTAGAAGGGGCACATTAGTAAATAGTTAGTAAGTTTGCTAGGGCTTTTTAGTTATAAACAGAGGGAGTGGGATGGGAACAAGGTGTGAAGAACTTTGTGTGATTGCCTTTGGAGAATTTGGGAGAGACTAGCCTCTCAAAAGCTTAGGCTATCTTGTTACTTTTCTTATGATATTACAACATATTTCCATATATTTATATATTTGAGTGTTTTTTCTTGTGTTGTTCTTGAGTGTTCTTGTTAGGAGTATCCTAACAGTCGGGTTCAGTAATAGATTAGTTGACTATGAATATTATTGTCATCTAAACTTTATTATGCCTACCAATCCCATAAAAGTTAAAATTCTCTGTATACTTATAAACTTATCCAATCAGGATTCGAATTAGACTAACATGATGGTGAAAAGCTCATCAAAACAATACTAACTGTTTCAATTTATTCAAAATTTTGAAGGTACCTCAAAAACATGGTCCAACGGGCAAATAAAAGGTTGTCGAGTCACAGAACCTTGTAGAACTCCAGGATGTCCAAACCATAGCCTATCTAACCGGCACCACAGTGGAGGCATGATCTAGAGTTCACAAAGTTCAAAATGAACAAATTACAGACAAAATTTCATAAGCAGCTGCAAAGACAAGAACACTAAGAAATGTGGTTGTAGTCTTTATACACAGATAATTCCAATAAATACTCCCTCCTATGTTTTTTGTTTGGTTGACATGTAAAAAGAACTTCTCACTGTTTATCAGCATGGTTAAATTACATATCGTCCCCTTTTATCAACTCCATTGTTGCCAGAATTTTCAATCAATTTTTCTCTTGAAAGACTTAACTAGCATCAAGTTGGGCAAAATCTCTTTAGAAATTAGTAGGTTAGATCATGAACATAATGTAAAAGTGTCTCTAGATAGCCGGTTAATTAAAATATATATATATATATATATATAAGAAAAGAGAGAGGGAAAGAGATATTCACAATCTCCTTCCTTCTTTCCTGTCAGTTCTCCCCAGAACGGGTTCCCCTCTTTTCTATATAATATCGTATTTGCTTTGAAGAATGAATGTGTGACAATAGAAAGCGTTCTTACCAGCGTACGATTCAACAATGAAGCAATACCAAGCGCAGTCCTTATTTGTTTCATCTGAACATAAAAAACAAATAGAAACTCAGAATTGGGACATTTTAGGACATCATATGAGAAAAAAACTTGGGTTTACTGTTAGAACACACAACCTGGTAGTTAATAAGAGTAAAATGTGTATCAAGGTTATGCTCTCCTTCTAGTATTAGGTTCTTAGGAATTGATGGCTTAAATGATAGGTAACCTCCTGCAGAATTTCCCAAGAAATGAAGCATTATTAAACATTAAAGCATCTTTCACACAATATCTTCATCAGTGAGGAAGGCTATTCAGTTGATCGTGAGGCCAGAAATAAATTTGAGAATCTACCCTAGAAACTTCAACTCCAAGGAGATTCTGTTATGACCCATACAAAGGTAACACAAGAACAATCACAAAAGCACATAAAAGTACTCAAAGGCGAGGGATAGAAAATAAGACGATTTGAAAAGTGATGTGCATATCATGCAGTAAAAAAGAATGATCCGTGAATCTCATACAAATTTTACCCGGTGCATCAAAGTACTCTGGAGGATCATAGAAAACCATGGCCTCACGCAGTCTGTGGCGCTTTCCTTCAGTACCCGCATACTGGAATGTAGTATGAACAGCATATGGCTCCAATCTAAATTGTTGATACATTGCCTGCCATTGTAATCTGACGGTTAGTTCATTAAGTAGATCAATGAGGATACATTTACATTGCTTATATTATGATTAATAAGATGTCGAGACCCAACACTAATGGATGCTCTAGAAAACAAAATGCTGAGGCAAAAAGTGGAGATACTACCTGGACAAAGTAGGTGTGTCCACTACAGAAAATACTTGCTGGTAAAATTCCTAGCTTGAGATTGCCATCATAAGCATAGACGAGGCCACTGTCTTCATCGACAGATGGCCCGTATTTCTTATGAACAAGTTCGTTGAAACCATTTTGATCCCAAATCTTGTCATCAGCTAGGAGCATTTCCCTCCACTCCTTTGCCAGTTTTTTTGATGTTTGTGTAGGCCGCCAGTGGAAAATTCCAATATTCAAGGCACCAGTAACTGTTTCAAAAACATTAGCACCTTTAATATTGATATGGAAGAAAGTGCAGGATACTTAACGTAGACTCGTAGAGTGCAGAATAAACTAATTATTCAAGTAAAGATTACTAAAGAATATTTCAAAAGAAAGAAAAAAAGGTGCTTCAGATAGAGATTGAAACTTCAGTTGCACAAAACAATATCCTGATTGTGTTTGAACCTTTTTAAAGACACGAAGATGGAACCATCTCAATTATGGCAAAACTTACAAAATTATAGGTGTTAGCGTATTCCAAATGAACTTCAAACAGTCATGAAACTAAGGATTAAAACATCGATGTCAATATCGACATCGGCATTTCAGTTCCACAGATATATCAAGATCACTAAAAATGAAAAAAAAAAAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTTGTATTTAATTTCAAACTAATTTAAATCTTGTTATTAGTATTTTATATTCGTATTGAGAGCTATAGATGATATTTTTATGTTTTATGGGTATTTATAAAAGATATAAAAGATATTGTTCACCCTCCAATTTACCGATATAACAATCTATCGACATATATATTAATTCTTGCATGAAATACATGTGAAGAAAACAACTTGAAACAGCTTTAATTCTACAGCTCATAGAAAGAACTAATGCTGTAAACTCCTTTTGTAGTAAAAAAGTCTTCATGCAAAAATGTAAAAAATTAAGCATGATACAATCAATCGTGGGTCAAAGAGGCATGCCCTAAAAGTATTGAAAAATCATGATTGTATATAGTTTTTATTTTGGCTTCAGAAAAGTTGAGTGATTTTGAATCAATGTCATGGAAGAATAGAGAATATTTAATATTTCACCTTCGTTCCATATATCCAAGCTGTCATCAACTACTGTTGGTACAACCTGATCACTTGAAGTTAAGACATCTGCTTCCGGATAACGAGCAAGATATGGGAGCGGATTCTGTTACATAA

mRNA sequence

ATGCTGATTTATATAAATGCTCACATCATTGACCTTATAAAGGAGGTCGATCTTCCTCGGGCGTTCGAGGTGGGTGTGGTTTCCAATCAGATGTCGAGACCCAACACTAATGGATGCTCTAGAAAACAAAATGCTGAGGCAAAAAGTGGAGATACTACCTGGACAAAGCCGCCAGTGGAAAATTCCAATATTCAAGGCACCAAAAAGTTGAGTGATTTTGAATCAATGTCATGGAAGAATAGAGAATATTTAATATTTCACCTTCGTTCCATATATCCAAGCTGTCATCAACTACTGTTGGTACAACCTGATCACTTGAAGTTAAGACATCTGCTTCCGGATAACGAGCAAGATATGGGAGCGGATTCTGTTACATAA

Coding sequence (CDS)

ATGCTGATTTATATAAATGCTCACATCATTGACCTTATAAAGGAGGTCGATCTTCCTCGGGCGTTCGAGGTGGGTGTGGTTTCCAATCAGATGTCGAGACCCAACACTAATGGATGCTCTAGAAAACAAAATGCTGAGGCAAAAAGTGGAGATACTACCTGGACAAAGCCGCCAGTGGAAAATTCCAATATTCAAGGCACCAAAAAGTTGAGTGATTTTGAATCAATGTCATGGAAGAATAGAGAATATTTAATATTTCACCTTCGTTCCATATATCCAAGCTGTCATCAACTACTGTTGGTACAACCTGATCACTTGAAGTTAAGACATCTGCTTCCGGATAACGAGCAAGATATGGGAGCGGATTCTGTTACATAA

Protein sequence

MLIYINAHIIDLIKEVDLPRAFEVGVVSNQMSRPNTNGCSRKQNAEAKSGDTTWTKPPVENSNIQGTKKLSDFESMSWKNREYLIFHLRSIYPSCHQLLLVQPDHLKLRHLLPDNEQDMGADSVT
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 33..66

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC11G203640.1CaUC11G203640.1mRNA