CaUC11G203560 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC11G203560
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
LocationCiama_Chr11: 2982872 .. 2986455 (+)
RNA-Seq ExpressionCaUC11G203560
SyntenyCaUC11G203560
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTATGTCGCTTTAGACTGGATAGGAAATTCGGTGGCATTTGAGATCGACGCAATTTCTCATAAACTAATTACAATTTAGAGTGAAAAGCAAAAAAAAAGAAAAAAAGAAAAAAAGAAAAAAAAGTAAAGGTAGATTTGGATTGGCAGCTGATCTCACTCTTCACCACTTTTGTTGTGTTGTAGAGCTCAATTTTAGGCATGGCAGAGGAGAGACACTGAGGAAGGAATGCAAGATTATAAAAAAGTTGCAGCAATGGGCGGCCAAGGTTTTGGTATATCTTCCTTTCCTTCTTTTAACGCATCTAAAGATAAAGATCTACTACTGTTAGAGCATATTTGTCATCTGAGAATTTATCCAAAGCTTTGTCTAGTAATTGTTTCCTTCAATTATACTTGACGATCTTTTTTGTTTCTTTGAATCCCTATTAATACTACTAATGATAATATAATGATTCATTTAAATCAACGAAAGGCAATGCTAATGACTGTGTATAGTACTTACATCGGAGTAAATGTTACATCTATATTTGGCAATGATATTATTCTTGTAGTTCATAGTTTAGATTTTTTTTCTTCTTTCTTTCTCTTCTTCTGTGCTATAATATACTTCAAAACTGTTTAAAATTCTAACCAACGGTAATAGGATAGGCTTGTAATATAATGTAATCCAAAATGAATGTTTGGATTGAAGTTTTGGGCCTGATTTGTAATACAAAAGTCATTCCATTCGGATAGTTTCAACTCAATCTTATTTCCCACGAACGGTTTGCCATCTCATTTTAGTTTATTCATTCTAATACTCCTTTGATTCCTAGTAATCCTATTACATTCCAAAGTGCTCACACATTCTAATACTCTTCTACTCTTCGCATTCTAATACTCTTCTAATTCCTAGTAATCCTATTACATTCCAACTCTTCAAACAATCCCTAATATTTTGGAATAACTGAACGTTTGTTTTACATCAATCTAGATGACTTCTCTTTTTACATTTAATTATCATTGGTATATTTTAAAGGTAACTTGTTTAATTACTTGAACGATACATAATAATTGGACCTACTATTGCAACTGAGTTTTTTTCTCCTTTACATACTTTGCTTTAGAAACTAAAATACTAAACTTACACTGGAATTTTCTAGCTGTTTCTCTTGTAATCTTCCCGCAACCACCAATTGGAGCACAGAGAAAGACCACTGGTTTCAAATATGCATCTAAACCAATTGAGTTATGATTGAGATTCTTTTGGAAAAAGAAGCTTCTTTCTAAGCATGTTTCACCAGGTATTTCATTACTTCTCAATTGTGGGACAAAAGCTAAATAACATTTAAATATCAGATATGCTTATTTTGCGATTTAAATTATAATTTGAATCTTATGTCAGTTTCTATACTTTAACAATATTTTCATTTAAACTTTAGTGCGTCCTACCTTAAGAACGAACTCGAAGACAAGACAATGATGGAGCAATAACATGCAAAATAGTTTTAAAAAAACAAAAAAAGAACTTTTGATGAGATGAAGTAGGTGAAAGGTCAAAATGATTCATGTAGAAGAGGTAATTCTACTTGCCTCAAGGTGATCACTAATGCTGTTATGTATTGAGCTCGTGAAAACACCAAGAACTACAAAATTGAGGAAGCTCTCCACCTACGCAAAAGACTATCATAATTCTCTCTGAAACTTCCCCTCTGCTCATAGAAACCATGCTTCAAGACCTTCATAGTTGATTCCATTATTCCGATTTGTCGATCAAGCATGTCGTCGGCGAAGCTCCTAACCTCTTTTAACCGATCCAAATTGCAGAGGCCAATGAGCAGTGCATTTGCACTTGCATCCATAGGCTTGATGTGATTCTCGACCATGTAGTTCCATATATCAATGGCCGTTTCAGGGTCATAACCATCAAACAACATTGTGATAGCTGCAGCACAATTAGAAGGGGTAGGAGGGCACTCATTCTTTACCATCTCCCTGAAAAATTGACTTGCTTCCTTAACTTTCTTATTCTTGATCAAACAGCTGAAGATCAGGTTGTAAGTTAAGGAGTTGGGAAAGGCACCATGGAAAACCATGGCATCCAAGAGCCGAAATGCGTCTTCGATCTTACTCTTCTCGCTTAGCAGTCCAATTATGGCATTGTACATAATCAAGTTAGGAACTAATCCACTTGCCACAACTATATCCCACAATAGAATCGCATGGTTTGCATCATTTTGCTGAATGAGACTATCGAGAGCATTGGACAGAAATTTCAAACCTGGCAAACAACCATTCTTCTTCATTTCTAGAAGAACATTGATTGCCTCTTCAGATCGGCCCCCACGAACCAATGTTATTAAAAATGCATCATAAGATGAAACATTTTCAGGATTCCAGCCGACCCTTTTCACCATTTCACTAAATGTAACCTCGGCTTTCTCCACATTGCCTTCTTTCTCCCAACCTTCCAATAAAATGGCGAATGAGTCCTCATCCAAAGGAATCTTCTCTTTATGCTTCTCAAAGAACTCCCAAGCCTTTGATGTTTGATTTTCTTGTGTACAAATTGCACTCAGTAGAGAATTCACTGCCATGACATTCTTCTCAACTTCGTACCTATCCATCACTTCAAAGCTCATCATCGCTTCTTTGAACCTGCCAGCAGAACAATAGCTCCCAAAAACGGACACGAAAGTTGGCAATGAAATGATCTTTTCTTGCCTCATCGTGCGAATGCCGTTCCACATTTCATCGAAAAGTTCGTTCTTGCCCAACAAATCAATCATCAGATTCCATGAGTACGCCGACTGCTTCGCCGACTGCCTCGCCCACCGGAAGAACTTGATCGCCGACGACGGATAGTTATAAGAAGCCCTTAGAACTTCTTGGACAAGCTCTGGCGACGGAGCCACTCCCGTCGCGGACAGCGCGGCATCTACATCGTTCCTCGAGGTTCTGACCAGGACTTCGCAAACGGTTTTAGCAGCCGGTGATATGTCGGGCAAGTCGAGATTCGATGGGAAGCGTGGGGATTTGGCGGACGGCGGCGAAGGACTGGGGGGAATTTTCGAAGGGTTTTTTACACCCATTTTAGGGTTTTCAGCCATGGCCTTCCACCATTCATCACTTCAAACTACTTGATAAAATCCACAATTGTTAAACCAAGAAGAAACCATTTGGACTCAGACGATCGATCGTAACTTTTCCTCTTTTAACGATCTCGATTGGTAAGAGAGATTTTTAGGAGCGAAAAGGTGTGGAGTTTACATGTAGGTGTGAAAACCTCCGCTTTGAAAAGCTTCGTCTGGAATTTTGGAACTCTAAAACGAGGGTAGCTAGTTGAATTTGCAGAGACGAAGGAACTGAACGTACAAGAGATGCTGACAGATGGAACGTACAAGAGGTTCCCTTGAACCCCAGGAGAGTGAGTTGGCATGTATTGTATTGGGGAAGATGATGCCACTGTGTTGTCCATTATGAAGCCCAATTCACGCGACTTGGCACATTGAAAGGAGATATTGGGCCTCAATTTTGTTTATGGTTTCAATAGTAGATTGGACATGGAAATGACTTGGATGATAAAAATCTCGCATTTTAA

mRNA sequence

ATGAAGCTCAATTTTAGGCATGGCAGAGGAGAGACACTGAGGAAGGAATGCAAGATTATAAAAAAGTTGCAGCAATGGGCGGCCAAGGTTTTGAAACCATGCTTCAAGACCTTCATAGTTGATTCCATTATTCCGATTTGTCGATCAAGCATGTCGTCGGCGAAGCTCCTAACCTCTTTTAACCGATCCAAATTGCAGAGGCCAATGAGCAGTGCATTTGCACTTGCATCCATAGGCTTGATGGTCATAACCATCAAACAACATTGTGATAGCTGCAGCACAATTAGAAGGGGTAGGAGGGCACTCATTCTTTACCATCTCCCTGAAAAATTGACTTGCTTCCTTAACTTTCTTATTCTTGATCAAACAGCTGAAGATCAGGAGTTGGGAAAGGCACCATGGAAAACCATGGCATCCAAGAGCCGAAATGCGTCTTCGATCTTACTCTTCTCGCTTAGCAGTCCAATTATGGCATTGTACATAATCAAAACTTCTTGGACAAGCTCTGGCGACGGAGCCACTCCCGTCGCGGACAGCGCGGCATCTACATCGTTCCTCGAGGTTCTGACCAGGACTTCGCAAACGGTTTTAGCAGCCGGTGATATGTCGGGCAAGTCGAGATTCGATGGGAAGCGTGGGGATTTGGCGGACGGCGGCGAAGGACTGGGGGGAATTTTCGAAGGCCATGGCCTTCCACCATTCATCACTTCAAACTACTTGATAAAATCCACAATTGTTAAACCAAGAAGAAACCATTTGGACTCAGACGATCGATCAGACGAAGGAACTGAACGTACAAGAGATGCTGACAGATGGAACGTACAAGAGGTTCCCTTGAACCCCAGGAGAGTGAGTTGGCATATTGGACATGGAAATGACTTGGATGATAAAAATCTCGCATTTTAA

Coding sequence (CDS)

ATGAAGCTCAATTTTAGGCATGGCAGAGGAGAGACACTGAGGAAGGAATGCAAGATTATAAAAAAGTTGCAGCAATGGGCGGCCAAGGTTTTGAAACCATGCTTCAAGACCTTCATAGTTGATTCCATTATTCCGATTTGTCGATCAAGCATGTCGTCGGCGAAGCTCCTAACCTCTTTTAACCGATCCAAATTGCAGAGGCCAATGAGCAGTGCATTTGCACTTGCATCCATAGGCTTGATGGTCATAACCATCAAACAACATTGTGATAGCTGCAGCACAATTAGAAGGGGTAGGAGGGCACTCATTCTTTACCATCTCCCTGAAAAATTGACTTGCTTCCTTAACTTTCTTATTCTTGATCAAACAGCTGAAGATCAGGAGTTGGGAAAGGCACCATGGAAAACCATGGCATCCAAGAGCCGAAATGCGTCTTCGATCTTACTCTTCTCGCTTAGCAGTCCAATTATGGCATTGTACATAATCAAAACTTCTTGGACAAGCTCTGGCGACGGAGCCACTCCCGTCGCGGACAGCGCGGCATCTACATCGTTCCTCGAGGTTCTGACCAGGACTTCGCAAACGGTTTTAGCAGCCGGTGATATGTCGGGCAAGTCGAGATTCGATGGGAAGCGTGGGGATTTGGCGGACGGCGGCGAAGGACTGGGGGGAATTTTCGAAGGCCATGGCCTTCCACCATTCATCACTTCAAACTACTTGATAAAATCCACAATTGTTAAACCAAGAAGAAACCATTTGGACTCAGACGATCGATCAGACGAAGGAACTGAACGTACAAGAGATGCTGACAGATGGAACGTACAAGAGGTTCCCTTGAACCCCAGGAGAGTGAGTTGGCATATTGGACATGGAAATGACTTGGATGATAAAAATCTCGCATTTTAA

Protein sequence

MKLNFRHGRGETLRKECKIIKKLQQWAAKVLKPCFKTFIVDSIIPICRSSMSSAKLLTSFNRSKLQRPMSSAFALASIGLMVITIKQHCDSCSTIRRGRRALILYHLPEKLTCFLNFLILDQTAEDQELGKAPWKTMASKSRNASSILLFSLSSPIMALYIIKTSWTSSGDGATPVADSAASTSFLEVLTRTSQTVLAAGDMSGKSRFDGKRGDLADGGEGLGGIFEGHGLPPFITSNYLIKSTIVKPRRNHLDSDDRSDEGTERTRDADRWNVQEVPLNPRRVSWHIGHGNDLDDKNLAF
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 251..273
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 251..272

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC11G203560.1CaUC11G203560.1mRNA