CaUC11G202910 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTTCCGCTCAGCCTGCAGGTGATCAATCGATTTTGATTTTATATTTGTAACTTATTTGAGATTAATTCTATGCGATTGAATTTATATATAATTTTGGATTTTTTTGGGGGGGTTTTTGTGTAGGTGTTTATCCTCCACCCTCCACCGTGCCAACCTCTTATGCAGCCCCACCCCCGGCGGGGTATCCGATGAGAGACGGCGGAGATTTCTCTCAACAACCCGCCCCTGTTCCGGCTGAAACCAAGTCTAGAGGCGATGGCTTTTGGAAAGGCTGGTAATTACCAATTATCAATTATATTAATACTTTAAAATTCGAAATTAAACGTTATAAAGAAATTGAAAAAAAAAAAAAAAAGATTCCTTTTTATATTTCTAAATATTGCCAAAATTTTAATATTTTATGATAGAAAATTTCTGTTCTTCCCAACCCAATCAAGAGAAGATTAGCATTTTTCTAAGAAATTTTTGTGAAGTAGTGGTATATAAATAATTAATTGTTTTTATTTCTTTTAATTAAAAAGAATTGTATCACCTCTGTCCTAATATCATTAGTGCACCTTCACATGTATCTCATTTTCTTTCGTAATAATAGTAATAAAAGTGATTGTTTTCAAATATAGAAAAATAAACTAAAAAATATATAAATGTAGTAAAATTTTAATATCATAGATTATGATAGACCGCGATAAACTATTATTTGTGTTTATCCATGTATATCGTGATATTTTACTATTATTTATAAATATTTTCAATTGTTTTATCATTTAAAATAATTTTAATAATAATTGATGATCTAAACAAATAGAAATCACATTCTTATTTTTAGTTTAGTACAGAATAATATTGAAAACGTTTGTAGAATATAAGTAATGGGAACTGTTATTAAATATTTAGGTAAACATTAAAAACGAGAAAGAAGTTTACCAAAGGAGTCTTAAAATTTTAATTTATATTTATATATAAAATTGAAATTTTGTGTTTGCAGTTGTGCTGCGTTGTGTTGCTGCTGTGTGTTGGATGCATGCTTCTAA ATGAGTTCCGCTCAGCCTGCAGGTGTTTATCCTCCACCCTCCACCGTGCCAACCTCTTATGCAGCCCCACCCCCGGCGGGGTATCCGATGAGAGACGGCGGAGATTTCTCTCAACAACCCGCCCCTGTTCCGGCTGAAACCAAGTCTAGAGGCGATGGCTTTTGGAAAGGCTGTTGTGCTGCGTTGTGTTGCTGCTGTGTGTTGGATGCATGCTTCTAA ATGAGTTCCGCTCAGCCTGCAGGTGTTTATCCTCCACCCTCCACCGTGCCAACCTCTTATGCAGCCCCACCCCCGGCGGGGTATCCGATGAGAGACGGCGGAGATTTCTCTCAACAACCCGCCCCTGTTCCGGCTGAAACCAAGTCTAGAGGCGATGGCTTTTGGAAAGGCTGTTGTGCTGCGTTGTGTTGCTGCTGTGTGTTGGATGCATGCTTCTAA MSSAQPAGVYPPPSTVPTSYAAPPPAGYPMRDGGDFSQQPAPVPAETKSRGDGFWKGCCAALCCCCVLDACF Homology
BLAST of CaUC11G202910 vs. NCBI nr
Match: KAG6591814.1 (hypothetical protein SDJN03_14160, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024679.1 hypothetical protein SDJN02_13497 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 138.3 bits (347), Expect = 2.7e-29 Identity = 67/72 (93.06%), Postives = 68/72 (94.44%), Query Frame = 0
BLAST of CaUC11G202910 vs. NCBI nr
Match: XP_022137938.1 (cysteine-rich and transmembrane domain-containing protein WIH2-like [Momordica charantia]) HSP 1 Score: 134.8 bits (338), Expect = 2.9e-28 Identity = 65/72 (90.28%), Postives = 66/72 (91.67%), Query Frame = 0
BLAST of CaUC11G202910 vs. NCBI nr
Match: XP_031739667.1 (cysteine-rich and transmembrane domain-containing protein WIH1-like [Cucumis sativus] >KGN54976.1 hypothetical protein Csa_012002 [Cucumis sativus]) HSP 1 Score: 124.8 bits (312), Expect = 3.0e-25 Identity = 65/74 (87.84%), Postives = 67/74 (90.54%), Query Frame = 0
BLAST of CaUC11G202910 vs. NCBI nr
Match: KAF3972548.1 (hypothetical protein CMV_003960 [Castanea mollissima]) HSP 1 Score: 115.9 bits (289), Expect = 1.4e-22 Identity = 55/72 (76.39%), Postives = 59/72 (81.94%), Query Frame = 0
BLAST of CaUC11G202910 vs. NCBI nr
Match: KAF3953656.1 (hypothetical protein CMV_020922 [Castanea mollissima]) HSP 1 Score: 114.4 bits (285), Expect = 4.1e-22 Identity = 54/72 (75.00%), Postives = 59/72 (81.94%), Query Frame = 0
BLAST of CaUC11G202910 vs. ExPASy Swiss-Prot
Match: Q8S8M0 (Cysteine-rich and transmembrane domain-containing protein WIH2 OS=Arabidopsis thaliana OX=3702 GN=WIH2 PE=1 SV=1) HSP 1 Score: 46.2 bits (108), Expect = 1.8e-04 Identity = 30/76 (39.47%), Postives = 35/76 (46.05%), Query Frame = 0
BLAST of CaUC11G202910 vs. ExPASy TrEMBL
Match: A0A6J1CBQ4 (cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Momordica charantia OX=3673 GN=LOC111009227 PE=3 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 1.4e-28 Identity = 65/72 (90.28%), Postives = 66/72 (91.67%), Query Frame = 0
BLAST of CaUC11G202910 vs. ExPASy TrEMBL
Match: A0A0A0L4C6 (CYSTM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G618410 PE=3 SV=1) HSP 1 Score: 124.8 bits (312), Expect = 1.5e-25 Identity = 65/74 (87.84%), Postives = 67/74 (90.54%), Query Frame = 0
BLAST of CaUC11G202910 vs. ExPASy TrEMBL
Match: A0A7N2R3F7 (CYSTM domain-containing protein OS=Quercus lobata OX=97700 PE=3 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 1.2e-22 Identity = 55/72 (76.39%), Postives = 59/72 (81.94%), Query Frame = 0
BLAST of CaUC11G202910 vs. ExPASy TrEMBL
Match: A0A7N2LG73 (CYSTM domain-containing protein OS=Quercus lobata OX=97700 PE=3 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 1.5e-22 Identity = 54/72 (75.00%), Postives = 59/72 (81.94%), Query Frame = 0
BLAST of CaUC11G202910 vs. ExPASy TrEMBL
Match: A0A7N2LJ98 (CYSTM domain-containing protein OS=Quercus lobata OX=97700 PE=3 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 1.3e-21 Identity = 53/72 (73.61%), Postives = 57/72 (79.17%), Query Frame = 0
BLAST of CaUC11G202910 vs. TAIR 10
Match: AT3G22240.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G22235.2); Has 177 Blast hits to 177 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 177; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 76.3 bits (186), Expect = 1.2e-14 Identity = 40/66 (60.61%), Postives = 43/66 (65.15%), Query Frame = 0
BLAST of CaUC11G202910 vs. TAIR 10
Match: AT2G32210.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G32190.1); Has 214 Blast hits to 214 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 10; Plants - 203; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 70.9 bits (172), Expect = 4.9e-13 Identity = 38/71 (53.52%), Postives = 42/71 (59.15%), Query Frame = 0
BLAST of CaUC11G202910 vs. TAIR 10
Match: AT2G32190.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G32210.1); Has 218 Blast hits to 218 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 16; Plants - 202; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 70.5 bits (171), Expect = 6.3e-13 Identity = 38/71 (53.52%), Postives = 41/71 (57.75%), Query Frame = 0
BLAST of CaUC11G202910 vs. TAIR 10
Match: AT1G05340.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G32210.1); Has 189 Blast hits to 189 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 21; Plants - 168; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 62.0 bits (149), Expect = 2.3e-10 Identity = 36/68 (52.94%), Postives = 41/68 (60.29%), Query Frame = 0
BLAST of CaUC11G202910 vs. TAIR 10
Match: AT2G32200.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G32210.1); Has 131 Blast hits to 131 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 1; Plants - 130; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 57.4 bits (137), Expect = 5.6e-09 Identity = 36/73 (49.32%), Postives = 39/73 (53.42%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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