CaUC11G201960 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC11G201960
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Elongation factor 1-alpha
Location	Ciama_Chr11: 1531366 .. 1531686 (-)
RNA-Seq Expression	CaUC11G201960
Synteny	CaUC11G201960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGCCACGACTCCCAAATACTCTAGGTCTAGGTACGATGAAATCGTCAAGGAAGTTTCATCCTACCTCAAGAAGGTTGGGTACAACCCAGACAAAATTCCCTTCGTCCCCATCTCTGGATTTGAGGGTGACAACATGATTGAAAGATCCACAAACCTCGACTGGTACAAGGGCCCTACCCTTCTGGAGGCTCTCGACCAAGTCCATGAGCCTAAGAGACCATCAGACAAACCCCTTCGTCTTCCACTTCANTTAAAAACGGCTCTAAGAAACCAAAAGACAACAGATATTAGAGGATGGTCCATTTTGAAAACATAG

mRNA sequence

ATGGATGCCACGACTCCCAAATACTCTAGGTCTAGGTACGATGAAATCGTCAAGGAAGTTTCATCCTACCTCAAGAAGGTTGGGTACAACCCAGACAAAATTCCCTTCGTCCCCATCTCTGGATTTGAGGGTGACAACATGATTGAAAGATCCACAAACCTCGACTGGTACAAGGGCCCTACCCTTCTGGAGGCTCTCGACCAAGTCCATGAGCCTAAGAGACCATCAGACAAACCCCTTCGTCTTCCACTTCANTTAAAAACGGCTCTAAGAAACCAAAAGACAACAGATATTAGAGGATGGTCCATTTTGAAAACATAG

Coding sequence (CDS)

ATGGATGCCACGACTCCCAAATACTCTAGGTCTAGGTACGATGAAATCGTCAAGGAAGTTTCATCCTACCTCAAGAAGGTTGGGTACAACCCAGACAAAATTCCCTTCGTCCCCATCTCTGGATTTGAGGGTGACAACATGATTGAAAGATCCACAAACCTCGACTGGTACAAGGGCCCTACCCTTCTGGAGGCTCTCGACCAAGTCCATGAGCCTAAGAGACCATCAGACAAACCCCTTCGTCTTCCACTTCANTTAAAAACGGCTCTAAGAAACCAAAAGACAACAGATATTAGAGGATGGTCCATTTTGAAAACATAG

Protein sequence

MDATTPKYSRSRYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQVHEPKRPSDKPLRLPLXLKTALRNQKTTDIRGWSILKT

Homology

[Close]

BLAST of CaUC11G201960 vs. NCBI nr
Match: XP_038889982.1 (elongation factor 1-alpha [Benincasa hispida] >XP_038889983.1 elongation factor 1-alpha [Benincasa hispida])

HSP 1 Score: 177.9 bits (450), Expect = 4.5e-41
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0


Query: 1   MDATTPKYSRSRYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 60
           MDATTPKYSRSRYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP
Sbjct: 155 MDATTPKYSRSRYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 214

Query: 61  TLLEALDQVHEPKRPSDKPLRLPL 85
           TLLEALDQVHEPKRPSDKPLRLPL
Sbjct: 215 TLLEALDQVHEPKRPSDKPLRLPL 238

[Close]

BLAST of CaUC11G201960 vs. NCBI nr
Match: TYK05697.1 (elongation factor 1-alpha-like [Cucumis melo var. makuwa])

HSP 1 Score: 176.8 bits (447), Expect = 9.9e-41
Identity = 83/84 (98.81%), Postives = 84/84 (100.00%), Query Frame = 0


Query: 1   MDATTPKYSRSRYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 60
           MDATTPKYS+SRYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP
Sbjct: 155 MDATTPKYSKSRYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 214

Query: 61  TLLEALDQVHEPKRPSDKPLRLPL 85
           TLLEALDQVHEPKRPSDKPLRLPL
Sbjct: 215 TLLEALDQVHEPKRPSDKPLRLPL 238

[Close]

BLAST of CaUC11G201960 vs. NCBI nr
Match: XP_011655323.2 (elongation factor 1-alpha [Cucumis sativus] >XP_031741430.1 elongation factor 1-alpha [Cucumis sativus] >KAE8648521.1 hypothetical protein Csa_009147 [Cucumis sativus])

HSP 1 Score: 176.8 bits (447), Expect = 9.9e-41
Identity = 83/84 (98.81%), Postives = 84/84 (100.00%), Query Frame = 0


Query: 1   MDATTPKYSRSRYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 60
           MDATTPKYS+SRYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP
Sbjct: 155 MDATTPKYSKSRYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 214

Query: 61  TLLEALDQVHEPKRPSDKPLRLPL 85
           TLLEALDQVHEPKRPSDKPLRLPL
Sbjct: 215 TLLEALDQVHEPKRPSDKPLRLPL 238

[Close]

BLAST of CaUC11G201960 vs. NCBI nr
Match: AAQ15280.1 (elongation factor 1 alpha, partial [Pyrus pyrifolia])

HSP 1 Score: 175.3 bits (443), Expect = 2.9e-40
Identity = 81/84 (96.43%), Postives = 84/84 (100.00%), Query Frame = 0


Query: 1   MDATTPKYSRSRYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 60
           MDATTPKYS++RYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP
Sbjct: 146 MDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 205

Query: 61  TLLEALDQVHEPKRPSDKPLRLPL 85
           TLLEALDQ+HEPKRPSDKPLRLPL
Sbjct: 206 TLLEALDQIHEPKRPSDKPLRLPL 229

[Close]

BLAST of CaUC11G201960 vs. NCBI nr
Match: XP_009342345.1 (PREDICTED: elongation factor 1-alpha-like [Pyrus x bretschneideri] >KAB2606713.1 elongation factor 1-alpha-like [Pyrus ussuriensis x Pyrus communis])

HSP 1 Score: 175.3 bits (443), Expect = 2.9e-40
Identity = 81/84 (96.43%), Postives = 84/84 (100.00%), Query Frame = 0


Query: 1   MDATTPKYSRSRYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 60
           MDATTPKYS++RYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP
Sbjct: 155 MDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 214

Query: 61  TLLEALDQVHEPKRPSDKPLRLPL 85
           TLLEALDQ+HEPKRPSDKPLRLPL
Sbjct: 215 TLLEALDQIHEPKRPSDKPLRLPL 238

[Close]

BLAST of CaUC11G201960 vs. ExPASy Swiss-Prot
Match: O64937 (Elongation factor 1-alpha OS=Oryza sativa subsp. japonica OX=39947 GN=REFA1 PE=2 SV=2)

HSP 1 Score: 172.6 bits (436), Expect = 2.5e-42
Identity = 80/84 (95.24%), Postives = 84/84 (100.00%), Query Frame = 0


Query: 1   MDATTPKYSRSRYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 60
           MDATTPKYS++RYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP
Sbjct: 155 MDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 214

Query: 61  TLLEALDQVHEPKRPSDKPLRLPL 85
           TLLEALDQ++EPKRPSDKPLRLPL
Sbjct: 215 TLLEALDQINEPKRPSDKPLRLPL 238

[Close]

BLAST of CaUC11G201960 vs. ExPASy Swiss-Prot
Match: P17786 (Elongation factor 1-alpha OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 2.5e-42
Identity = 80/84 (95.24%), Postives = 84/84 (100.00%), Query Frame = 0


Query: 1   MDATTPKYSRSRYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 60
           MDATTPKYS++RYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP
Sbjct: 155 MDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 214

Query: 61  TLLEALDQVHEPKRPSDKPLRLPL 85
           TLLEALDQ++EPKRPSDKPLRLPL
Sbjct: 215 TLLEALDQINEPKRPSDKPLRLPL 238

[Close]

BLAST of CaUC11G201960 vs. ExPASy Swiss-Prot
Match: P0DH99 (Elongation factor 1-alpha 1 OS=Arabidopsis thaliana OX=3702 GN=A1 PE=1 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 3.2e-42
Identity = 79/84 (94.05%), Postives = 84/84 (100.00%), Query Frame = 0


Query: 1   MDATTPKYSRSRYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 60
           MDATTPKYS++RYDEI+KEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP
Sbjct: 155 MDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 214

Query: 61  TLLEALDQVHEPKRPSDKPLRLPL 85
           TLLEALDQ++EPKRPSDKPLRLPL
Sbjct: 215 TLLEALDQINEPKRPSDKPLRLPL 238

[Close]

BLAST of CaUC11G201960 vs. ExPASy Swiss-Prot
Match: Q8W4H7 (Elongation factor 1-alpha 2 OS=Arabidopsis thaliana OX=3702 GN=A2 PE=1 SV=2)

HSP 1 Score: 172.2 bits (435), Expect = 3.2e-42
Identity = 79/84 (94.05%), Postives = 84/84 (100.00%), Query Frame = 0


Query: 1   MDATTPKYSRSRYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 60
           MDATTPKYS++RYDEI+KEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP
Sbjct: 155 MDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 214

Query: 61  TLLEALDQVHEPKRPSDKPLRLPL 85
           TLLEALDQ++EPKRPSDKPLRLPL
Sbjct: 215 TLLEALDQINEPKRPSDKPLRLPL 238

[Close]

BLAST of CaUC11G201960 vs. ExPASy Swiss-Prot
Match: Q0WL56 (Elongation factor 1-alpha 3 OS=Arabidopsis thaliana OX=3702 GN=A3 PE=1 SV=2)

HSP 1 Score: 172.2 bits (435), Expect = 3.2e-42
Identity = 79/84 (94.05%), Postives = 84/84 (100.00%), Query Frame = 0


Query: 1   MDATTPKYSRSRYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 60
           MDATTPKYS++RYDEI+KEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP
Sbjct: 155 MDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 214

Query: 61  TLLEALDQVHEPKRPSDKPLRLPL 85
           TLLEALDQ++EPKRPSDKPLRLPL
Sbjct: 215 TLLEALDQINEPKRPSDKPLRLPL 238

[Close]

BLAST of CaUC11G201960 vs. ExPASy TrEMBL
Match: A0A5D3C1K1 (Elongation factor 1-alpha OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G001780 PE=3 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 4.8e-41
Identity = 83/84 (98.81%), Postives = 84/84 (100.00%), Query Frame = 0


Query: 1   MDATTPKYSRSRYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 60
           MDATTPKYS+SRYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP
Sbjct: 155 MDATTPKYSKSRYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 214

Query: 61  TLLEALDQVHEPKRPSDKPLRLPL 85
           TLLEALDQVHEPKRPSDKPLRLPL
Sbjct: 215 TLLEALDQVHEPKRPSDKPLRLPL 238

[Close]

BLAST of CaUC11G201960 vs. ExPASy TrEMBL
Match: A0A0A0KNN9 (Elongation factor 1-alpha OS=Cucumis sativus OX=3659 GN=Csa_5G495950 PE=3 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 4.8e-41
Identity = 83/84 (98.81%), Postives = 84/84 (100.00%), Query Frame = 0


Query: 1   MDATTPKYSRSRYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 60
           MDATTPKYS+SRYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP
Sbjct: 108 MDATTPKYSKSRYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 167

Query: 61  TLLEALDQVHEPKRPSDKPLRLPL 85
           TLLEALDQVHEPKRPSDKPLRLPL
Sbjct: 168 TLLEALDQVHEPKRPSDKPLRLPL 191

[Close]

BLAST of CaUC11G201960 vs. ExPASy TrEMBL
Match: Q7X9D2 (Elongation factor 1 alpha (Fragment) OS=Pyrus pyrifolia OX=3767 PE=2 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 1.4e-40
Identity = 81/84 (96.43%), Postives = 84/84 (100.00%), Query Frame = 0


Query: 1   MDATTPKYSRSRYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 60
           MDATTPKYS++RYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP
Sbjct: 146 MDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 205

Query: 61  TLLEALDQVHEPKRPSDKPLRLPL 85
           TLLEALDQ+HEPKRPSDKPLRLPL
Sbjct: 206 TLLEALDQIHEPKRPSDKPLRLPL 229

[Close]

BLAST of CaUC11G201960 vs. ExPASy TrEMBL
Match: A0A5N5FUJ8 (Elongation factor 1-alpha OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_006430 PE=3 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 1.4e-40
Identity = 81/84 (96.43%), Postives = 84/84 (100.00%), Query Frame = 0


Query: 1   MDATTPKYSRSRYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 60
           MDATTPKYS++RYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP
Sbjct: 155 MDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 214

Query: 61  TLLEALDQVHEPKRPSDKPLRLPL 85
           TLLEALDQ+HEPKRPSDKPLRLPL
Sbjct: 215 TLLEALDQIHEPKRPSDKPLRLPL 238

[Close]

BLAST of CaUC11G201960 vs. ExPASy TrEMBL
Match: A5C4C2 (Elongation factor 1-alpha OS=Vitis vinifera OX=29760 GN=VIT_08s0040g02330 PE=3 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 2.4e-40
Identity = 81/84 (96.43%), Postives = 83/84 (98.81%), Query Frame = 0


Query: 1   MDATTPKYSRSRYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 60
           MDATTPKYS+SRYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP
Sbjct: 155 MDATTPKYSKSRYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 214

Query: 61  TLLEALDQVHEPKRPSDKPLRLPL 85
           TLLEALD +HEPKRPSDKPLRLPL
Sbjct: 215 TLLEALDMIHEPKRPSDKPLRLPL 238

[Close]

BLAST of CaUC11G201960 vs. TAIR 10
Match: AT1G07920.1 (GTP binding Elongation factor Tu family protein )

HSP 1 Score: 172.2 bits (435), Expect = 2.3e-43
Identity = 79/84 (94.05%), Postives = 84/84 (100.00%), Query Frame = 0


Query: 1   MDATTPKYSRSRYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 60
           MDATTPKYS++RYDEI+KEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP
Sbjct: 155 MDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 214

Query: 61  TLLEALDQVHEPKRPSDKPLRLPL 85
           TLLEALDQ++EPKRPSDKPLRLPL
Sbjct: 215 TLLEALDQINEPKRPSDKPLRLPL 238

[Close]

BLAST of CaUC11G201960 vs. TAIR 10
Match: AT1G07930.1 (GTP binding Elongation factor Tu family protein )

HSP 1 Score: 172.2 bits (435), Expect = 2.3e-43
Identity = 79/84 (94.05%), Postives = 84/84 (100.00%), Query Frame = 0


Query: 1   MDATTPKYSRSRYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 60
           MDATTPKYS++RYDEI+KEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP
Sbjct: 155 MDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 214

Query: 61  TLLEALDQVHEPKRPSDKPLRLPL 85
           TLLEALDQ++EPKRPSDKPLRLPL
Sbjct: 215 TLLEALDQINEPKRPSDKPLRLPL 238

[Close]

BLAST of CaUC11G201960 vs. TAIR 10
Match: AT1G07940.1 (GTP binding Elongation factor Tu family protein )

HSP 1 Score: 172.2 bits (435), Expect = 2.3e-43
Identity = 79/84 (94.05%), Postives = 84/84 (100.00%), Query Frame = 0


Query: 1   MDATTPKYSRSRYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 60
           MDATTPKYS++RYDEI+KEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP
Sbjct: 155 MDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 214

Query: 61  TLLEALDQVHEPKRPSDKPLRLPL 85
           TLLEALDQ++EPKRPSDKPLRLPL
Sbjct: 215 TLLEALDQINEPKRPSDKPLRLPL 238

[Close]

BLAST of CaUC11G201960 vs. TAIR 10
Match: AT1G07940.2 (GTP binding Elongation factor Tu family protein )

HSP 1 Score: 172.2 bits (435), Expect = 2.3e-43
Identity = 79/84 (94.05%), Postives = 84/84 (100.00%), Query Frame = 0


Query: 1   MDATTPKYSRSRYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 60
           MDATTPKYS++RYDEI+KEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP
Sbjct: 155 MDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 214

Query: 61  TLLEALDQVHEPKRPSDKPLRLPL 85
           TLLEALDQ++EPKRPSDKPLRLPL
Sbjct: 215 TLLEALDQINEPKRPSDKPLRLPL 238

[Close]

BLAST of CaUC11G201960 vs. TAIR 10
Match: AT1G07930.2 (GTP binding Elongation factor Tu family protein )

HSP 1 Score: 172.2 bits (435), Expect = 2.3e-43
Identity = 79/84 (94.05%), Postives = 84/84 (100.00%), Query Frame = 0


Query: 1   MDATTPKYSRSRYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 60
           MDATTPKYS++RYDEI+KEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP
Sbjct: 155 MDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGP 214

Query: 61  TLLEALDQVHEPKRPSDKPLRLPL 85
           TLLEALDQ++EPKRPSDKPLRLPL
Sbjct: 215 TLLEALDQINEPKRPSDKPLRLPL 238

The following BLAST results are available for this feature:

BLAST of CaUC11G201960 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889982.1	4.5e-41	100.00	elongation factor 1-alpha [Benincasa hispida] >XP_038889983.1 elongation factor ...	[more]
TYK05697.1	9.9e-41	98.81	elongation factor 1-alpha-like [Cucumis melo var. makuwa]	[more]
XP_011655323.2	9.9e-41	98.81	elongation factor 1-alpha [Cucumis sativus] >XP_031741430.1 elongation factor 1-...	[more]
AAQ15280.1	2.9e-40	96.43	elongation factor 1 alpha, partial [Pyrus pyrifolia]	[more]
XP_009342345.1	2.9e-40	96.43	PREDICTED: elongation factor 1-alpha-like [Pyrus x bretschneideri] >KAB2606713.1...	[more]

BLAST of CaUC11G201960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O64937	2.5e-42	95.24	Elongation factor 1-alpha OS=Oryza sativa subsp. japonica OX=39947 GN=REFA1 PE=2...	[more]
P17786	2.5e-42	95.24	Elongation factor 1-alpha OS=Solanum lycopersicum OX=4081 PE=2 SV=1	[more]
P0DH99	3.2e-42	94.05	Elongation factor 1-alpha 1 OS=Arabidopsis thaliana OX=3702 GN=A1 PE=1 SV=1	[more]
Q8W4H7	3.2e-42	94.05	Elongation factor 1-alpha 2 OS=Arabidopsis thaliana OX=3702 GN=A2 PE=1 SV=2	[more]
Q0WL56	3.2e-42	94.05	Elongation factor 1-alpha 3 OS=Arabidopsis thaliana OX=3702 GN=A3 PE=1 SV=2	[more]

BLAST of CaUC11G201960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C1K1	4.8e-41	98.81	Elongation factor 1-alpha OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A0A0KNN9	4.8e-41	98.81	Elongation factor 1-alpha OS=Cucumis sativus OX=3659 GN=Csa_5G495950 PE=3 SV=1	[more]
Q7X9D2	1.4e-40	96.43	Elongation factor 1 alpha (Fragment) OS=Pyrus pyrifolia OX=3767 PE=2 SV=1	[more]
A0A5N5FUJ8	1.4e-40	96.43	Elongation factor 1-alpha OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8...	[more]
A5C4C2	2.4e-40	96.43	Elongation factor 1-alpha OS=Vitis vinifera OX=29760 GN=VIT_08s0040g02330 PE=3 S...	[more]

BLAST of CaUC11G201960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07920.1	2.3e-43	94.05	GTP binding Elongation factor Tu family protein	[more]
AT1G07930.1	2.3e-43	94.05	GTP binding Elongation factor Tu family protein	[more]
AT1G07940.1	2.3e-43	94.05	GTP binding Elongation factor Tu family protein	[more]
AT1G07940.2	2.3e-43	94.05	GTP binding Elongation factor Tu family protein	[more]
AT1G07930.2	2.3e-43	94.05	GTP binding Elongation factor Tu family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 6..71 e-value: 2.2E-27 score: 97.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 6..84
None	No IPR available	GENE3D	2.40.30.10	Translation factors	coord: 72..84 e-value: 2.2E-27 score: 97.4
None	No IPR available	PANTHER	PTHR23115:SF268	ELONGATION FACTOR 1-ALPHA	coord: 1..85
None	No IPR available	PANTHER	PTHR23115	TRANSLATION FACTOR	coord: 1..85

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC11G201960.1	CaUC11G201960.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006414	translational elongation
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0003746	translation elongation factor activity