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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGCTGTTACAAAAATTAGTTTTCTGGTTGGTCTCTTGGCATTTCTCTGCTTAAGCCTCGGCTCTGCCCATCGAGTTCTCAAGAACAACCATTCTGAAAACCAATTAATAAGTGACAGTGTGTCTTCTGGACAAGATAATCACCTACAAAATTCCAGCCATGCTGAGTTGAAAAGTATACCAAAAGGCAACATACCAAAATTCAGTTCTGTTGGTCCAACAAATGGTGATTGTTGCAACTATGGCAACATCTGTGGAGGATATTCATGTTGTGGTGGAAGCTCTGGTTGCCCGTCATGCTACACTTGTTCGCCATGTCAATGGCAGGAATGCCAGGGATGCCAGGGATGTCAAGAGTGTCAGGAGTGTCAAGGATGCCAGAGTTGTGGCTGTCAAGTCCGCATGAACAACTCTAAGGTCAAACAGGAATCTATTCAAGCAAGTGAACCTGAACCGCCTATTGTTACAATTGTTCCACCAGTCCAGCCAGCAGATCATAACATAAAATCTAGTGGGGAAGCAAATCAGGACATGAAATCCAATGGCGGTCTGGTTTAG mRNA sequence ATGGCTGTTACAAAAATTAGTTTTCTGGTTGGTCTCTTGGCATTTCTCTGCTTAAGCCTCGGCTCTGCCCATCGAGTTCTCAAGAACAACCATTCTGAAAACCAATTAATAAGTGACAGTGTGTCTTCTGGACAAGATAATCACCTACAAAATTCCAGCCATGCTGAGTTGAAAAGTATACCAAAAGGCAACATACCAAAATTCAGTTCTGTTGGTCCAACAAATGGTGATTGTTGCAACTATGGCAACATCTGTGGAGGATATTCATGTTGTGGTGGAAGCTCTGGTTGCCCGTCATGCTACACTTGTTCGCCATGTCAATGGCAGGAATGCCAGGGATGCCAGGGATGTCAAGAGTGTCAGGAGTGTCAAGGATGCCAGAGTTGTGGCTGTCAAGTCCGCATGAACAACTCTAAGGTCAAACAGGAATCTATTCAAGCAAGTGAACCTGAACCGCCTATTGTTACAATTGTTCCACCAGTCCAGCCAGCAGATCATAACATAAAATCTAGTGGGGAAGCAAATCAGGACATGAAATCCAATGGCGGTCTGGTTTAG Coding sequence (CDS) ATGGCTGTTACAAAAATTAGTTTTCTGGTTGGTCTCTTGGCATTTCTCTGCTTAAGCCTCGGCTCTGCCCATCGAGTTCTCAAGAACAACCATTCTGAAAACCAATTAATAAGTGACAGTGTGTCTTCTGGACAAGATAATCACCTACAAAATTCCAGCCATGCTGAGTTGAAAAGTATACCAAAAGGCAACATACCAAAATTCAGTTCTGTTGGTCCAACAAATGGTGATTGTTGCAACTATGGCAACATCTGTGGAGGATATTCATGTTGTGGTGGAAGCTCTGGTTGCCCGTCATGCTACACTTGTTCGCCATGTCAATGGCAGGAATGCCAGGGATGCCAGGGATGTCAAGAGTGTCAGGAGTGTCAAGGATGCCAGAGTTGTGGCTGTCAAGTCCGCATGAACAACTCTAAGGTCAAACAGGAATCTATTCAAGCAAGTGAACCTGAACCGCCTATTGTTACAATTGTTCCACCAGTCCAGCCAGCAGATCATAACATAAAATCTAGTGGGGAAGCAAATCAGGACATGAAATCCAATGGCGGTCTGGTTTAG Protein sequence MAVTKISFLVGLLAFLCLSLGSAHRVLKNNHSENQLISDSVSSGQDNHLQNSSHAELKSIPKGNIPKFSSVGPTNGDCCNYGNICGGYSCCGGSSGCPSCYTCSPCQWQECQGCQGCQECQECQGCQSCGCQVRMNNSKVKQESIQASEPEPPIVTIVPPVQPADHNIKSSGEANQDMKSNGGLV
Homology
BLAST of CaUC11G201480 vs. NCBI nr
Match: KGN55137.1 (hypothetical protein Csa_012773 [Cucumis sativus]) HSP 1 Score: 227.6 bits (579), Expect = 8.6e-56 Identity = 127/215 (59.07%), Postives = 149/215 (69.30%), Query Frame = 0 Query: 1 MAVTKISFLVGLLAFLCLSLGSAHRVLKNNHSENQLISDSVSSGQDNHLQNSSHAELKSI 60 MAVT+ S LVGLLAFLCLSLGSA+R+LKNN +ENQLI D V SG++NH QNS+H ELKSI Sbjct: 1 MAVTRTSLLVGLLAFLCLSLGSANRILKNNDAENQLIGDDVPSGKENHPQNSNHDELKSI 60
Query: 61 PKGNIPKFSSVGPTNGDCCNYGNIC------------------------GGYSCC----- 120 P ++ K SS+ P NGDCC+YG C GG S C Sbjct: 61 PTDSMAKISSINPINGDCCSYGTNCGIYPPPTCGCGGCGGCSGCSGGGGGGCSGCSGGGG 120
Query: 121 -GGSSGCPSCYTCSPCQWQECQGCQGCQECQECQGCQSCGCQVRMNNSKVKQESIQASEP 180 GGSS C SC TCS CQW QGC GCQECQ CQGCQSCGCQ M++SKV+Q+S+Q EP Sbjct: 121 GGGSSSCQSCNTCSSCQW---QGCHGCQECQGCQGCQSCGCQASMDDSKVEQDSVQTGEP 180
Query: 181 EPPIVTIVPPVQPADHNIKSSGEANQDMKSNGGLV 186 P+VTIVPP +P D++IKSSG +NQD+KSNGGLV Sbjct: 181 -APVVTIVPPAKPTDNDIKSSGGSNQDIKSNGGLV 211
BLAST of CaUC11G201480 vs. NCBI nr
Match: XP_023535133.1 (mesenchyme-specific cell surface glycoprotein-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 185.7 bits (470), Expect = 3.7e-43 Identity = 125/225 (55.56%), Postives = 145/225 (64.44%), Query Frame = 0 Query: 1 MAVTKISFLVGLLAFLCLSLGSAHRVLKNNHSENQLISDSVSSGQDNHLQNSSHAELKSI 60 MAVTK SFLVGLLAFLCLSL SA+RVLKNN +E +L+S++VSS QDN LQ+ ++AELKSI Sbjct: 1 MAVTKSSFLVGLLAFLCLSLSSANRVLKNNDAEKELLSNNVSSEQDNQLQDFNNAELKSI 60
Query: 61 PKGNIPKFSSVGPTNGDC---C------------NYGNICG----GYSCCGGSSGCPSCY 120 P+GN+PK SSVG GDC C NYG+ G Y GGSSGC CY Sbjct: 61 PEGNVPKLSSVGSGYGDCGGNCGSSGGGGYTYPPNYGSGGGSSPPNYGSGGGSSGCQPCY 120
Query: 121 TCSPCQWQEC---QGCQGCQ-ECQECQ-GCQSC-----GCQV----------RMNNSKVK 180 T SPC WQ C QGCQGCQ CQ CQ GCQ C GCQ +N+SK++ Sbjct: 121 TYSPCPWQGCPGFQGCQGCQGGCQGCQGGCQGCQGGCQGCQAPHPPCTFEVGTVNDSKIQ 180
Query: 181 QESI-QASEPEPPIVTIVPPVQPADHNIKSSGEANQDMKSNGGLV 186 ESI EPEPP++ P +H+IKSSG ANQDMKSNGGLV Sbjct: 181 DESIPMGEEPEPPVL-------PENHHIKSSGGANQDMKSNGGLV 218
BLAST of CaUC11G201480 vs. NCBI nr
Match: KAG6591970.1 (hypothetical protein SDJN03_14316, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 184.5 bits (467), Expect = 8.3e-43 Identity = 122/218 (55.96%), Postives = 143/218 (65.60%), Query Frame = 0 Query: 1 MAVTKISFLVGLLAFLCLSLGSAHRVLKNNHSENQLISDSVSSGQDNHLQNSSHAELKSI 60 MAVTK SFLVGLLAFLCLSL SA+RVLKNN +E +L++++VSS QDN LQ+ ++AELKSI Sbjct: 1 MAVTKNSFLVGLLAFLCLSLSSANRVLKNNDAEKELLNNNVSSEQDNQLQDFNNAELKSI 60
Query: 61 PKGNIPKFSSVGPTNGDC---C------------NYGNICG----GYSCCGGSSGCPSCY 120 P+GN+PK SSVG GDC C NYG+ G Y GGSSGC CY Sbjct: 61 PEGNVPKLSSVGSGYGDCGGNCGSSGGGGYTYPPNYGSGGGSSPPNYGSGGGSSGCQPCY 120
Query: 121 TCSPCQWQECQGCQGCQECQ-ECQGCQ-SC-GCQV----------RMNNSKVKQESI-QA 180 T SPC WQ C G QGCQ CQ CQGCQ C GCQ +N+SK++ ESI Sbjct: 121 TYSPCPWQGCPGFQGCQGCQGGCQGCQGGCQGCQAPHPPCTFEVGTVNDSKIQDESIPMG 180
Query: 181 SEPEPPIVTIVPPVQPADHNIKSSGEANQDMKSNGGLV 186 EPEPP++ P +H+IKSSG ANQDMKSNGGLV Sbjct: 181 EEPEPPVL-------PENHHIKSSGGANQDMKSNGGLV 211
BLAST of CaUC11G201480 vs. NCBI nr
Match: KAG6607873.1 (hypothetical protein SDJN03_01215, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 144.8 bits (364), Expect = 7.3e-31 Identity = 101/191 (52.88%), Postives = 119/191 (62.30%), Query Frame = 0 Query: 1 MAVTKISFLVGLLAFLCLSLGSAHRVLKNNHSENQLISDSVSSGQDNHLQNSSHAELKSI 60 MAVTK S LV LL LCLS SA+RVLK+N SEN+ I++SVS GQ+ L N HAEL +I Sbjct: 7 MAVTKDSILVSLLMLLCLSHSSANRVLKDNDSENESINNSVSFGQEYELHNFIHAELNNI 66
Query: 61 -PKGNIPKFSSVGPTNGDCCNYGNICGGYSC-----CGGSSGCPSCYTCSPCQWQECQGC 120 P+G+IPKF S DCCN+GN GGY C CG +SGC Y+CSPCQW Sbjct: 67 VPEGSIPKFRSY----RDCCNHGNHGGGYVCPPNHACGRNSGCRPYYSCSPCQWWRYPVL 126
Query: 121 QGCQECQECQGCQSCGCQVRMNNSKVKQESIQASEPEPPIVTIVPPVQPADHNIKSSGEA 180 CGC V + S V QESIQ SE + + VP V+PA+HNIK SG A Sbjct: 127 P-----------PPCGCAVGKSYSMV-QESIQTSEAD--LDGNVPAVEPANHNIKFSGGA 179
Query: 181 NQDMKSNGGLV 186 NQ+MKSNGGLV Sbjct: 187 NQNMKSNGGLV 179
BLAST of CaUC11G201480 vs. NCBI nr
Match: CAE7457951.1 (unnamed protein product [Symbiodinium pilosum]) HSP 1 Score: 59.3 bits (142), Expect = 4.0e-05 Identity = 31/49 (63.27%), Postives = 33/49 (67.35%), Query Frame = 0 Query: 85 CGGYSCCGGSSGCPSCYTCSPCQ-WQECQGCQGCQECQECQGCQSCGCQ 133 CGG +CCGG +GC CY C CQ Q CQGC GCQ C CQGCQ CG Q Sbjct: 1182 CGGCACCGGCAGCQGCYGCGGCQGCQGCQGCPGCQGC-GCQGCQGCGYQ 1229
BLAST of CaUC11G201480 vs. ExPASy TrEMBL
Match: A0A0A0L3F6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G637770 PE=4 SV=1) HSP 1 Score: 227.6 bits (579), Expect = 4.1e-56 Identity = 127/215 (59.07%), Postives = 149/215 (69.30%), Query Frame = 0 Query: 1 MAVTKISFLVGLLAFLCLSLGSAHRVLKNNHSENQLISDSVSSGQDNHLQNSSHAELKSI 60 MAVT+ S LVGLLAFLCLSLGSA+R+LKNN +ENQLI D V SG++NH QNS+H ELKSI Sbjct: 1 MAVTRTSLLVGLLAFLCLSLGSANRILKNNDAENQLIGDDVPSGKENHPQNSNHDELKSI 60
Query: 61 PKGNIPKFSSVGPTNGDCCNYGNIC------------------------GGYSCC----- 120 P ++ K SS+ P NGDCC+YG C GG S C Sbjct: 61 PTDSMAKISSINPINGDCCSYGTNCGIYPPPTCGCGGCGGCSGCSGGGGGGCSGCSGGGG 120
Query: 121 -GGSSGCPSCYTCSPCQWQECQGCQGCQECQECQGCQSCGCQVRMNNSKVKQESIQASEP 180 GGSS C SC TCS CQW QGC GCQECQ CQGCQSCGCQ M++SKV+Q+S+Q EP Sbjct: 121 GGGSSSCQSCNTCSSCQW---QGCHGCQECQGCQGCQSCGCQASMDDSKVEQDSVQTGEP 180
Query: 181 EPPIVTIVPPVQPADHNIKSSGEANQDMKSNGGLV 186 P+VTIVPP +P D++IKSSG +NQD+KSNGGLV Sbjct: 181 -APVVTIVPPAKPTDNDIKSSGGSNQDIKSNGGLV 211
BLAST of CaUC11G201480 vs. ExPASy TrEMBL
Match: A0A5A7V9R7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G003880 PE=4 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 4.4e-05 Identity = 30/38 (78.95%), Postives = 34/38 (89.47%), Query Frame = 0 Query: 1 MAVTKISFLVGLLAFLCLSLGSAHRVLKNNHSENQLIS 39 MAVTK S LVGLLAFLCLSL SA+R+LKNN +ENQLI+ Sbjct: 1 MAVTKTSLLVGLLAFLCLSLSSANRILKNNDAENQLIA 38
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KGN55137.1 | 8.6e-56 | 59.07 | hypothetical protein Csa_012773 [Cucumis sativus] | [more] |
XP_023535133.1 | 3.7e-43 | 55.56 | mesenchyme-specific cell surface glycoprotein-like [Cucurbita pepo subsp. pepo] | [more] |
KAG6591970.1 | 8.3e-43 | 55.96 | hypothetical protein SDJN03_14316, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG6607873.1 | 7.3e-31 | 52.88 | hypothetical protein SDJN03_01215, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
CAE7457951.1 | 4.0e-05 | 63.27 | unnamed protein product [Symbiodinium pilosum] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0L3F6 | 4.1e-56 | 59.07 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G637770 PE=4 SV=1 | [more] |
A0A5A7V9R7 | 4.4e-05 | 78.95 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
Match Name | E-value | Identity | Description | |
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 165..185 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 168..185 |
Relationships
The following mRNA feature(s) are a part of this gene:
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