CaUC10G199660 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCACATAGTTTATTCTTCGAAATTCTAATGAAACAAAAAATTACGACTGATTTAAAATCTTTTTTAGATCATCACATGGACAACCTGTATTAAAACAACAAGCAATTCTTTTGGAGGTTTCTCTCTTTCCTTTATAAGAACGAAACAAGTGGTCAGGCTTCACAGCTCCAACCGGTTCTTCCACGGCCGCCATTAGCGTCGTAACTGTAAGCTTCATCAATTCTTCATTCATGGTGTTATATTCACCCACGAGCTGTAACCAATTAGCGAAGCATCAAGCATAAAATCCCCAAGTGGCGTTTGAGCTTCAGTAACAAGTAATAACAACACAACGCCAGAGGAAGGTGGCCGAGGAAAGAGCGACGATTAAGGGTTTCGAGAACGGAAAAATGGAGAATCAGGAAGCTCGCAGGTCGAATACGGAACAGAGATCGACGAAGAAATCGATTCCTCCGTACATGAAGGCGATCTCTGGTTCTCTCGGAGGGGTAATGGAGGCCTGTTGTCTACAGCCGATTGACGTTATCAAGACTAGGTTACAGCTCGATCGGAGCGGGGCGTACAAGGGGATTGTTCACTGTGGAGCTACGGTAACGCGAACGGAAGGAGTTCGAGCTCTTTGGAAGGGATTGACTCCGTTCGCTACGCATCTGACCTTGAAATATGCGCTTCGCATGGGGTCTAATGCGGTGCTTCAGACCGCCTTTAAGGATTCCGAGACTGGAAAACTCAGCAATCATGCTCGGCTGATTTCTGGATTCGGTGCCGGAGTATTGGAGGCTCTCGTCATTGTTACTCCATTTGAGGTCGGTTTGCATCTCTCGCTCTCTCTTTCTCATTGTCAACTAATTTGCTACAATTCAACTTTCAGTTTCATGTTCGACAGATTTGAACATGGCATCATGATTATATACCCTTTTTTATATTATCGAATTAGAGATTACTCTCCTGAGGAAGGACGCCTAACCAGTTAATTATCCTCTGATGGGTGATTATGAAATTAATTCGTAGAATTTGAAAATCACTAGCTCTGAACGTTGGTCTCAAGGTTGAGTTGAGGGCGCTGGTTCTCCTCTTTAACCATGGGAAACCGTGCGTGGACGATAGTTAGCGCTGACAGGACTGATATAATATAATATAAACACCTTTTGCTGATTCTTTTAATGGCGATGTACTTAAATCAATTTTTAATGCTCATCGATGGCTTTTTTTTCAACGGAAAATATGGATTTTAGTTTTATAATGGCAGAATGAGATTCCAACTAAAGCCCTGGCATTGCCTTTTCCGTGTGCAGGATATATATATAATATATTACTTGTTGGTTGGGACTGGTGGTGAACAGTGTTTTGGCCCTTTTTAACGTTAGGAATAGGAATTAATTAGTTTTCATATGGGTCAGAGCCCACTCTTACCCCTCTGCACGTTTAGCATTTTAGTATTTCCTATATAATGAATCAATGATGATTTGGTATTTGTCCTTTAAAAGTATCATGTTTCTAAGTTCAAAACATTTGAAAAATATTCATAGTGATTCGGACAGTAGAAACTCTGCCTGCTTCATTTACTCTACCAAACTCCATTTGTAGTAGGTTGCTTCTTTTTCACGAGATCAACATTTGAGAGTTGTTACTCAAGCATGTTTTTAGCTTTATAGAAAATATCAGTTTCTTTACCACTGTCAACGGTTTGCCTTGGTTGCTGACTTTCTTCATTTGGGTTTATTTAGCAGCTAAATTAGGGTAGGGGAGAATGCTAAACAAAAATCCATTAATGTTATTGGGAGTGCAACCAAATCCCACATTTCAAATTTAAAAGAAGTGATTTGATTGGTATGATCTATGGGTTAATCTTGGATGCATTAGTATAAAAAATTATGATAAGGACCAAAGTTTCAAATTTGATAGGGGAAGGGACGATCTTAGTAATTTGTAGATATATAAGTAAAATAACAATTATTTATATTAGTATGAGACTTTGGGGTACAACTGAAGTCTGAAGTAAAACCACGTGGACATATGTCTAAAGGGGATAACATTATACTATTATGTTATACCATTGCTTAATGCGGTTGTTGACCCAGGCTACGGTGGTCGGTTGGACACACACAATCAATTTGGTTAACTAAGAAACTCAGTTTTCCGTTCTCTATATCAAATTAATTTAATGCCTAGTTCCTTAATACCGCCATTCTTGGTCTTCCTATCTACTTACTATCCTTCTTGTAAGTCAAAATTCATCTTTTCTATTTCTTTTGCATCAGTTGGTGCATCCCATTTTATGTAAAAGGAAGTAACTTATTAAGGCAGAAGTTTGCACGAAAGTAGAGAGTTATGCAATTATTTTATATCTAGAGTCCATTTACAGAAGGTCTCAAGATTATGATGTTGCTAATAAAAAGATGTCGGTGAGTTAGATTCAAGTTCAAAGGTTTGAGTAAGAAGAAAACTTTGGCTTAGAGAGTGAAATATTTATTATCTTGCTCTTTGTTGATACACTGCAACTGTGCTGCATACTATAGATAAATTTGACCGTCTTCCCTCTCAAATTTTTTACTTGTCTTTTGGTTTTCATGGTCAATTAAAGAGGTTGTTCTGCTCCATGTGTAAGCAGTTCTACCTGAGTTGATTTGTTTAGTAAATTTGTTCCGTTTCAACTTGAACCCTATTCATGTATGTCCAATAGTAAGAAGTGTGGGATGTCTAACATATTGGTGTGAATGTTGCTTGTGTAGGTGGTGAAAATTAGATTGCAGCAGCAGAAAGGCCTGAGTCCTGAGCTCCTCAAGTATAAGGGTCCAGTGCACTGTGCTCGAATGATTATTCGCGAAGAAGGCCTCCTAGGACTTTGGGCAGGTGCTGCCCCAACTGTTATGCGCAATGGTACAAACCAGGCTGCCATGTTTACTGCCAAGAATGCTTTTGATATTGTTCTTTGGAACAGACACGAAGGGGATGGAAAAGTCCTCCAGCCATGGCAGTCGATGGTATCGGGATTCCTAGCAGGCACGGCAGGCCCTTTATGCACTGGTCCTTTTGATGTTGTGAAAACTAGGCTAATGGCCCAAAGCCGAGGCGCAGGTGAACTCAAGTACAATGGCATGTTCCATGCTATCAAAACTATATACGCAGAGGAGGGACTTCTTGCTTTATGGAAAGGGCTGCTGCCCCGGCTCATGAGGATTCCACCAGGGCAGGCCATTGTGTGGGCTGTGGCCGATCAAATTATCGGCTTGTATGAGAGGAGACATCTTTATGATGCTCCCATATGAATATTAGGCATATTTTTGGCACTGGTTTACTATTAAGTCCACTCCAGACGCGACCTTACTCGAACAAGATCTGTTCTATAGACTGACCAATTAGCGTCTTTTATTGCATGCCTCCATTTTCCTGTGTCTGATTCAGCCACCATCCAAATAACCATGAAGATTTGGCGCCTCATGTCTTCAAATAGATCAAATTGGTAGACATGGGAAAGTATTTTAGACAAGTAGTCCCTTTGAAATTTAGTGTCCGAGTAGTGCTTATTCTTTAGTCACAATTCTTGGATTCCTTGGGAGTACCAAGACTTATTGTTGGTAGATGTTGTTTTGTACTCAATAACATAATTTCTTGTAGGTCTTGTATCAGGTAAACATTGTTATCAAAAGGTATTGGATTTTAAGAAAATGAACAATAATTGAATTGGTTGAAAGATGTTGCCTCTGTATATACATAGGCTATGATGAGTTTGGCTGGTACTCAAAATTTTCAGTTTACCAATTGTTCAATTTTTCTTATGCAGGGCTCTGATTTTGCAGCTGATGAATGGATTTTATGCGTATATCTCACTAGTCAAAAGCTGAAACTCTCTCCTTGTGGACCATATATTTAGTTTAGTATGCATTTCTATCAAATGTATATATGTATATGGAATCTATCTATTATAGCAACTAGGAAACTTCCTAAGGCTTGATTAGGACCATTGTTGGCCTCAAAGAACAGTTATCTTTCTTTTACTTTACTTGGTCTCATGACATTTCTTGTATGCTATATTATAAGGGATGCATGGTTAGCATAAAGGAATCATTTTGTTGCAGAAGTAATGCTTCCGCATCTTTCAGATGGCAACATATTGCTTTACTCAATATTGTCTGTTAGTTT TCACATAGTTTATTCTTCGAAATTCTAATGAAACAAAAAATTACGACTGATTTAAAATCTTTTTTAGATCATCACATGGACAACCTGTATTAAAACAACAAGCAATTCTTTTGGAGGTTTCTCTCTTTCCTTTATAAGAACGAAACAAGTGGTCAGGCTTCACAGCTCCAACCGGTTCTTCCACGGCCGCCATTAGCGTCGTAACTGTAAGCTTCATCAATTCTTCATTCATGGTGTTATATTCACCCACGAGCTGTAACCAATTAGCGAAGCATCAAGCATAAAATCCCCAAGTGGCGTTTGAGCTTCAGTAACAAGTAATAACAACACAACGCCAGAGGAAGGTGGCCGAGGAAAGAGCGACGATTAAGGGTTTCGAGAACGGAAAAATGGAGAATCAGGAAGCTCGCAGGTCGAATACGGAACAGAGATCGACGAAGAAATCGATTCCTCCGTACATGAAGGCGATCTCTGGTTCTCTCGGAGGGGTAATGGAGGCCTGTTGTCTACAGCCGATTGACGTTATCAAGACTAGGTTACAGCTCGATCGGAGCGGGGCGTACAAGGGGATTGTTCACTGTGGAGCTACGGTAACGCGAACGGAAGGAGTTCGAGCTCTTTGGAAGGGATTGACTCCGTTCGCTACGCATCTGACCTTGAAATATGCGCTTCGCATGGGGTCTAATGCGGTGCTTCAGACCGCCTTTAAGGATTCCGAGACTGGAAAACTCAGCAATCATGCTCGGCTGATTTCTGGATTCGGTGCCGGAGTATTGGAGGCTCTCGTCATTGTTACTCCATTTGAGGTGGTGAAAATTAGATTGCAGCAGCAGAAAGGCCTGAGTCCTGAGCTCCTCAAGTATAAGGGTCCAGTGCACTGTGCTCGAATGATTATTCGCGAAGAAGGCCTCCTAGGACTTTGGGCAGGTGCTGCCCCAACTGTTATGCGCAATGGTACAAACCAGGCTGCCATGTTTACTGCCAAGAATGCTTTTGATATTGTTCTTTGGAACAGACACGAAGGGGATGGAAAAGTCCTCCAGCCATGGCAGTCGATGGTATCGGGATTCCTAGCAGGCACGGCAGGCCCTTTATGCACTGGTCCTTTTGATGTTGTGAAAACTAGGCTAATGGCCCAAAGCCGAGGCGCAGGTGAACTCAAGTACAATGGCATGTTCCATGCTATCAAAACTATATACGCAGAGGAGGGACTTCTTGCTTTATGGAAAGGGCTGCTGCCCCGGCTCATGAGGATTCCACCAGGGCAGGCCATTGTGTGGGCTGTGGCCGATCAAATTATCGGCTTGTATGAGAGGAGACATCTTTATGATGCTCCCATATGAATATTAGGCATATTTTTGGCACTGGTTTACTATTAAGTCCACTCCAGACGCGACCTTACTCGAACAAGATCTGTTCTATAGACTGACCAATTAGCGTCTTTTATTGCATGCCTCCATTTTCCTGTGTCTGATTCAGCCACCATCCAAATAACCATGAAGATTTGGCGCCTCATGTCTTCAAATAGATCAAATTGGTAGACATGGGAAAGTATTTTAGACAAGTAGTCCCTTTGAAATTTAGTGTCCGAGTAGTGCTTATTCTTTAGTCACAATTCTTGGATTCCTTGGGAGTACCAAGACTTATTGTTGGTAGATGTTGTTTTGTACTCAATAACATAATTTCTTGTAGGTCTTGTATCAGGTAAACATTGTTATCAAAAGGTATTGGATTTTAAGAAAATGAACAATAATTGAATTGGTTGAAAGATGTTGCCTCTGTATATACATAGGCTATGATGAGTTTGGCTGGTACTCAAAATTTTCAGTTTACCAATTGTTCAATTTTTCTTATGCAGGGCTCTGATTTTGCAGCTGATGAATGGATTTTATGCGTATATCTCACTAGTCAAAAGCTGAAACTCTCTCCTTGTGGACCATATATTTAGTTTAGTATGCATTTCTATCAAATGTATATATGTATATGGAATCTATCTATTATAGCAACTAGGAAACTTCCTAAGGCTTGATTAGGACCATTGTTGGCCTCAAAGAACAGTTATCTTTCTTTTACTTTACTTGGTCTCATGACATTTCTTGTATGCTATATTATAAGGGATGCATGGTTAGCATAAAGGAATCATTTTGTTGCAGAAGTAATGCTTCCGCATCTTTCAGATGGCAACATATTGCTTTACTCAATATTGTCTGTTAGTTT ATGGAGAATCAGGAAGCTCGCAGGTCGAATACGGAACAGAGATCGACGAAGAAATCGATTCCTCCGTACATGAAGGCGATCTCTGGTTCTCTCGGAGGGGTAATGGAGGCCTGTTGTCTACAGCCGATTGACGTTATCAAGACTAGGTTACAGCTCGATCGGAGCGGGGCGTACAAGGGGATTGTTCACTGTGGAGCTACGGTAACGCGAACGGAAGGAGTTCGAGCTCTTTGGAAGGGATTGACTCCGTTCGCTACGCATCTGACCTTGAAATATGCGCTTCGCATGGGGTCTAATGCGGTGCTTCAGACCGCCTTTAAGGATTCCGAGACTGGAAAACTCAGCAATCATGCTCGGCTGATTTCTGGATTCGGTGCCGGAGTATTGGAGGCTCTCGTCATTGTTACTCCATTTGAGGTGGTGAAAATTAGATTGCAGCAGCAGAAAGGCCTGAGTCCTGAGCTCCTCAAGTATAAGGGTCCAGTGCACTGTGCTCGAATGATTATTCGCGAAGAAGGCCTCCTAGGACTTTGGGCAGGTGCTGCCCCAACTGTTATGCGCAATGGTACAAACCAGGCTGCCATGTTTACTGCCAAGAATGCTTTTGATATTGTTCTTTGGAACAGACACGAAGGGGATGGAAAAGTCCTCCAGCCATGGCAGTCGATGGTATCGGGATTCCTAGCAGGCACGGCAGGCCCTTTATGCACTGGTCCTTTTGATGTTGTGAAAACTAGGCTAATGGCCCAAAGCCGAGGCGCAGGTGAACTCAAGTACAATGGCATGTTCCATGCTATCAAAACTATATACGCAGAGGAGGGACTTCTTGCTTTATGGAAAGGGCTGCTGCCCCGGCTCATGAGGATTCCACCAGGGCAGGCCATTGTGTGGGCTGTGGCCGATCAAATTATCGGCTTGTATGAGAGGAGACATCTTTATGATGCTCCCATATGA MENQEARRSNTEQRSTKKSIPPYMKAISGSLGGVMEACCLQPIDVIKTRLQLDRSGAYKGIVHCGATVTRTEGVRALWKGLTPFATHLTLKYALRMGSNAVLQTAFKDSETGKLSNHARLISGFGAGVLEALVIVTPFEVVKIRLQQQKGLSPELLKYKGPVHCARMIIREEGLLGLWAGAAPTVMRNGTNQAAMFTAKNAFDIVLWNRHEGDGKVLQPWQSMVSGFLAGTAGPLCTGPFDVVKTRLMAQSRGAGELKYNGMFHAIKTIYAEEGLLALWKGLLPRLMRIPPGQAIVWAVADQIIGLYERRHLYDAPI Homology
BLAST of CaUC10G199660 vs. NCBI nr
Match: XP_038906113.1 (mitochondrial succinate-fumarate transporter 1 [Benincasa hispida]) HSP 1 Score: 625.9 bits (1613), Expect = 1.9e-175 Identity = 306/317 (96.53%), Postives = 312/317 (98.42%), Query Frame = 0
BLAST of CaUC10G199660 vs. NCBI nr
Match: XP_008442392.1 (PREDICTED: mitochondrial succinate-fumarate transporter 1 [Cucumis melo] >KAA0044187.1 mitochondrial succinate-fumarate transporter 1 [Cucumis melo var. makuwa] >TYK24945.1 mitochondrial succinate-fumarate transporter 1 [Cucumis melo var. makuwa]) HSP 1 Score: 622.5 bits (1604), Expect = 2.0e-174 Identity = 305/317 (96.21%), Postives = 308/317 (97.16%), Query Frame = 0
BLAST of CaUC10G199660 vs. NCBI nr
Match: XP_004137702.1 (mitochondrial succinate-fumarate transporter 1 [Cucumis sativus] >KGN58738.1 hypothetical protein Csa_001973 [Cucumis sativus]) HSP 1 Score: 618.2 bits (1593), Expect = 3.9e-173 Identity = 303/317 (95.58%), Postives = 309/317 (97.48%), Query Frame = 0
BLAST of CaUC10G199660 vs. NCBI nr
Match: XP_022145724.1 (mitochondrial succinate-fumarate transporter 1 [Momordica charantia]) HSP 1 Score: 617.1 bits (1590), Expect = 8.6e-173 Identity = 303/317 (95.58%), Postives = 310/317 (97.79%), Query Frame = 0
BLAST of CaUC10G199660 vs. NCBI nr
Match: XP_022971508.1 (mitochondrial succinate-fumarate transporter 1-like [Cucurbita maxima]) HSP 1 Score: 616.7 bits (1589), Expect = 1.1e-172 Identity = 302/316 (95.57%), Postives = 310/316 (98.10%), Query Frame = 0
BLAST of CaUC10G199660 vs. ExPASy Swiss-Prot
Match: Q9M038 (Mitochondrial succinate-fumarate transporter 1 OS=Arabidopsis thaliana OX=3702 GN=SFC1 PE=2 SV=1) HSP 1 Score: 538.9 bits (1387), Expect = 3.9e-152 Identity = 253/303 (83.50%), Postives = 279/303 (92.08%), Query Frame = 0
BLAST of CaUC10G199660 vs. ExPASy Swiss-Prot
Match: P33303 (Succinate/fumarate mitochondrial transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=SFC1 PE=1 SV=2) HSP 1 Score: 184.5 bits (467), Expect = 1.9e-45 Identity = 112/309 (36.25%), Postives = 161/309 (52.10%), Query Frame = 0
BLAST of CaUC10G199660 vs. ExPASy Swiss-Prot
Match: P53007 (Tricarboxylate transport protein, mitochondrial OS=Homo sapiens OX=9606 GN=SLC25A1 PE=1 SV=2) HSP 1 Score: 160.2 bits (404), Expect = 3.8e-38 Identity = 99/292 (33.90%), Postives = 151/292 (51.71%), Query Frame = 0
BLAST of CaUC10G199660 vs. ExPASy Swiss-Prot
Match: P79110 (Tricarboxylate transport protein, mitochondrial OS=Bos taurus OX=9913 GN=SLC25A1 PE=2 SV=1) HSP 1 Score: 158.3 bits (399), Expect = 1.4e-37 Identity = 98/292 (33.56%), Postives = 149/292 (51.03%), Query Frame = 0
BLAST of CaUC10G199660 vs. ExPASy Swiss-Prot
Match: Q6PGY3 (Tricarboxylate transport protein A, mitochondrial OS=Danio rerio OX=7955 GN=slc25a1a PE=2 SV=1) HSP 1 Score: 157.5 bits (397), Expect = 2.4e-37 Identity = 99/296 (33.45%), Postives = 155/296 (52.36%), Query Frame = 0
BLAST of CaUC10G199660 vs. ExPASy TrEMBL
Match: A0A5A7TQQ9 (Mitochondrial succinate-fumarate transporter 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00610 PE=3 SV=1) HSP 1 Score: 622.5 bits (1604), Expect = 9.9e-175 Identity = 305/317 (96.21%), Postives = 308/317 (97.16%), Query Frame = 0
BLAST of CaUC10G199660 vs. ExPASy TrEMBL
Match: A0A1S3B5K9 (mitochondrial succinate-fumarate transporter 1 OS=Cucumis melo OX=3656 GN=LOC103486272 PE=3 SV=1) HSP 1 Score: 622.5 bits (1604), Expect = 9.9e-175 Identity = 305/317 (96.21%), Postives = 308/317 (97.16%), Query Frame = 0
BLAST of CaUC10G199660 vs. ExPASy TrEMBL
Match: A0A0A0LA59 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G731000 PE=3 SV=1) HSP 1 Score: 618.2 bits (1593), Expect = 1.9e-173 Identity = 303/317 (95.58%), Postives = 309/317 (97.48%), Query Frame = 0
BLAST of CaUC10G199660 vs. ExPASy TrEMBL
Match: A0A6J1CW40 (mitochondrial succinate-fumarate transporter 1 OS=Momordica charantia OX=3673 GN=LOC111015110 PE=3 SV=1) HSP 1 Score: 617.1 bits (1590), Expect = 4.2e-173 Identity = 303/317 (95.58%), Postives = 310/317 (97.79%), Query Frame = 0
BLAST of CaUC10G199660 vs. ExPASy TrEMBL
Match: A0A6J1I723 (mitochondrial succinate-fumarate transporter 1-like OS=Cucurbita maxima OX=3661 GN=LOC111470208 PE=3 SV=1) HSP 1 Score: 616.7 bits (1589), Expect = 5.4e-173 Identity = 302/316 (95.57%), Postives = 310/316 (98.10%), Query Frame = 0
BLAST of CaUC10G199660 vs. TAIR 10
Match: AT5G01340.1 (Mitochondrial substrate carrier family protein ) HSP 1 Score: 538.9 bits (1387), Expect = 2.8e-153 Identity = 253/303 (83.50%), Postives = 279/303 (92.08%), Query Frame = 0
BLAST of CaUC10G199660 vs. TAIR 10
Match: AT4G03115.1 (Mitochondrial substrate carrier family protein ) HSP 1 Score: 115.2 bits (287), Expect = 9.9e-26 Identity = 91/305 (29.84%), Postives = 141/305 (46.23%), Query Frame = 0
BLAST of CaUC10G199660 vs. TAIR 10
Match: AT4G24570.1 (dicarboxylate carrier 2 ) HSP 1 Score: 114.0 bits (284), Expect = 2.2e-25 Identity = 88/310 (28.39%), Postives = 141/310 (45.48%), Query Frame = 0
BLAST of CaUC10G199660 vs. TAIR 10
Match: AT5G58970.1 (uncoupling protein 2 ) HSP 1 Score: 114.0 bits (284), Expect = 2.2e-25 Identity = 79/289 (27.34%), Postives = 132/289 (45.67%), Query Frame = 0
BLAST of CaUC10G199660 vs. TAIR 10
Match: AT2G37890.1 (Mitochondrial substrate carrier family protein ) HSP 1 Score: 113.6 bits (283), Expect = 2.9e-25 Identity = 88/304 (28.95%), Postives = 136/304 (44.74%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|