CaUC10G199630 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAAAAAACTCGAAGTTGGGCCGAAAAGTTAGCTTCTGAAAACAGAAAATATCTCCGACAGCGTGAGCGGTTTCTTCCGGTTTCTTCCCAATGGCTGCAATCAGTCTACCTCTACTCCTCACTCCTCCTCCTCTTCATATCTTCTCAATCAAATCTTCCCAAAGCACTTCCAAATTCTTGCCGTTCTCTCAATCTAATCCTTCTCCTCTCCTTTCCGGTTCCTCCAAGCTCTACACTGCAGCCAAAGGTCGCACTTCTTCGTTAATCGCTTTTGCTGCCAAGAATCTCTCGGAGTCTGAGCTTAACTCCCTGCCGCAGTCCGTCGGGGAAATTGCCGGAAAATTTCCTTCTGACGCCGGTGTTTATGCCGTTTACGACAAGGACGACGATGTTCAGTTCATCGGCATTACAAGGAACATAGCAGGGAGCGTCGCCACTCACTGGAAATCAGTACCAGAGCTTTGCGTCTCCGTCAAGGTAGGAGGCGTCTTTTTCCTGTTGGTTCTTTCTCCATATTTTTCATTTTCAGCCCTAATTGATTATTGGGAAGGTTTGTTGAGGTTTTTGCGCTAGTGCGATACATGATGAATTGAAAATGAGGTGGTACACACTGGAGTATAGATCTTCTTCGTTTGGAAATAATATCGAAAGGTTTCTTCTGTATATAGGCATTCATTATTGTCTCCAATGGACCGATGTCTCAATCTTTTGTCCATCAAATTTTGGATACTTAATCTAGTCTAGGCTTCTTAGTTTTCATCGGGTTTGTAATGATGTATCTGCATCATAATCACGTGGTCTTCTTCGCGCTCTGCTGCTGATAATTGTTTCACACTGACTAGCTCGATCTTCACTCATCAGTTCATTGGTTGAAAATTGAAATGGTGTTGAACTATAAGATAGCTGGAACTGGAATTAGGGGAATTCATGCAAATTGCAATTTAATGATGGGAGATAGTCGTCACTTGCTGGACACAGGGAAAATTGTTTTTCACTTGCTGCTGCTTGCAATCTTATGGTTTTTTGGACTTTGCTTGAACATATATTTCAATATTTTGTGGTTGGTGGCTGAAATCAAATCGCAGGCAGCTTCTTGCCTACTATACTTCATGAACTTTTCTTAGAGAAGATGGCGATTTTATCAGCTTTCTGAATTAGGACCTTCTGAGTGGCAGCTACCCTTTGACAAGATCATTTTTGTTGGGCAATGGGTATATCTCCTTAGGAGTGAACGTATATAGAATAGATACTCTTTTTTGCGCTCCTTGAATATTCTTACGGGACAAGCTAGGTGCTCGTTGCTGAGGAAACTCTTAAGATATTAAATTGTTTGTACTCATTCCTCATTTATTTGGGCATATGCTCAATGGCTATCTACCCACCTTGCTCTACACATTCTAGTGCATTCTATTCTTATGTGAATTCAACTTCTAATGCAATAGGGATACGAGGAACCTAAATTACTCACAAAAGAAGTAGGAATGGTTTTAGGAAGCAATTTATAATTGAGAGGCAGTGAGTTACTTTATCTATAGTATTGATGAGGAGTTGAGAATTCAAGTTTTCTGTGCAGCAATAGAAATCTAAACTTACCTGACTTTCTATTTTTAAATGTCCACTCTCTGTAGTTTGGAGTAGTAGATGAACCTGATAGAACAACCTTAACACAAGCATGGAAGTCATGGATGGAAGAACACATAAAAGCCACTGGGAAGGTGCCGCCAGGTAATGAATCTGGAAATGCAACATGGGTAAGGCAGCCACCAAAGAAGAAGGCTGATCTGAGGTTGACGCCTGGTCGACACGTCCAACTTACAGTTCCATTGGAAGACCTCATCGATCAATTGGTGAAGGAGAACAAGGTTGTTGCATTCATCAAGGGTTCAAGAAGCGCACCGTTGTGTGGTTTTTCACAAAGGGTAATAGGCATTCTTGAAGCTGAAGGGGTAGATTACGAGAGTGTCGATGTGCTCGATGAAGAATACAACAATGGGCTAAGGGAAACTCTCAAAACATACAGCAACTGGCCTACGTTTCCTCAAATCTTCGTGGATGGCCAATTAATTGGAGGTTGTGACATTCTTAATTCTATGCATGAAAAAGGTGAACTTGCTGGTTTGTTAAAGAACTGATTGTCAAATTTTAACTTTCAGCAAAACTATTGCTTTGTTGGATTGAGAGGCATAATTGGAAGGAGGTGATATTATGCCCGGTTTCATGCTTTGTCAGTTGCTCTATAGAAGTGTAGTTTAAGTTTCATAAAGTTGAACAACTATATGTTAAAAGCAAGTCCTTCCTTTTCCTATTTCCTCTCAAAGCAAGAGCTGAAGTTTTGGGGGTAACTCCAAACTTAGTAAATGGTTGAAACTTAAAACCAACAACAATTTGATAAACTTTAGATGTCTCAAATCCTAGATTTGAAGAATGCATTTATT CAAAAAAACTCGAAGTTGGGCCGAAAAGTTAGCTTCTGAAAACAGAAAATATCTCCGACAGCGTGAGCGGTTTCTTCCGGTTTCTTCCCAATGGCTGCAATCAGTCTACCTCTACTCCTCACTCCTCCTCCTCTTCATATCTTCTCAATCAAATCTTCCCAAAGCACTTCCAAATTCTTGCCGTTCTCTCAATCTAATCCTTCTCCTCTCCTTTCCGGTTCCTCCAAGCTCTACACTGCAGCCAAAGGTCGCACTTCTTCGTTAATCGCTTTTGCTGCCAAGAATCTCTCGGAGTCTGAGCTTAACTCCCTGCCGCAGTCCGTCGGGGAAATTGCCGGAAAATTTCCTTCTGACGCCGGTGTTTATGCCGTTTACGACAAGGACGACGATGTTCAGTTCATCGGCATTACAAGGAACATAGCAGGGAGCGTCGCCACTCACTGGAAATCAGTACCAGAGCTTTGCGTCTCCGTCAAGTTTGGAGTAGTAGATGAACCTGATAGAACAACCTTAACACAAGCATGGAAGTCATGGATGGAAGAACACATAAAAGCCACTGGGAAGGTGCCGCCAGGTAATGAATCTGGAAATGCAACATGGGTAAGGCAGCCACCAAAGAAGAAGGCTGATCTGAGGTTGACGCCTGGTCGACACGTCCAACTTACAGTTCCATTGGAAGACCTCATCGATCAATTGGTGAAGGAGAACAAGGTTGTTGCATTCATCAAGGGTTCAAGAAGCGCACCGTTGTGTGGTTTTTCACAAAGGGTAATAGGCATTCTTGAAGCTGAAGGGGTAGATTACGAGAGTGTCGATGTGCTCGATGAAGAATACAACAATGGGCTAAGGGAAACTCTCAAAACATACAGCAACTGGCCTACGTTTCCTCAAATCTTCGTGGATGGCCAATTAATTGGAGGTTGTGACATTCTTAATTCTATGCATGAAAAAGGTGAACTTGCTGGTTTGTTAAAGAACTGATTGTCAAATTTTAACTTTCAGCAAAACTATTGCTTTGTTGGATTGAGAGGCATAATTGGAAGGAGGTGATATTATGCCCGGTTTCATGCTTTGTCAGTTGCTCTATAGAAGTGTAGTTTAAGTTTCATAAAGTTGAACAACTATATGTTAAAAGCAAGTCCTTCCTTTTCCTATTTCCTCTCAAAGCAAGAGCTGAAGTTTTGGGGGTAACTCCAAACTTAGTAAATGGTTGAAACTTAAAACCAACAACAATTTGATAAACTTTAGATGTCTCAAATCCTAGATTTGAAGAATGCATTTATT ATGGCTGCAATCAGTCTACCTCTACTCCTCACTCCTCCTCCTCTTCATATCTTCTCAATCAAATCTTCCCAAAGCACTTCCAAATTCTTGCCGTTCTCTCAATCTAATCCTTCTCCTCTCCTTTCCGGTTCCTCCAAGCTCTACACTGCAGCCAAAGGTCGCACTTCTTCGTTAATCGCTTTTGCTGCCAAGAATCTCTCGGAGTCTGAGCTTAACTCCCTGCCGCAGTCCGTCGGGGAAATTGCCGGAAAATTTCCTTCTGACGCCGGTGTTTATGCCGTTTACGACAAGGACGACGATGTTCAGTTCATCGGCATTACAAGGAACATAGCAGGGAGCGTCGCCACTCACTGGAAATCAGTACCAGAGCTTTGCGTCTCCGTCAAGTTTGGAGTAGTAGATGAACCTGATAGAACAACCTTAACACAAGCATGGAAGTCATGGATGGAAGAACACATAAAAGCCACTGGGAAGGTGCCGCCAGGTAATGAATCTGGAAATGCAACATGGGTAAGGCAGCCACCAAAGAAGAAGGCTGATCTGAGGTTGACGCCTGGTCGACACGTCCAACTTACAGTTCCATTGGAAGACCTCATCGATCAATTGGTGAAGGAGAACAAGGTTGTTGCATTCATCAAGGGTTCAAGAAGCGCACCGTTGTGTGGTTTTTCACAAAGGGTAATAGGCATTCTTGAAGCTGAAGGGGTAGATTACGAGAGTGTCGATGTGCTCGATGAAGAATACAACAATGGGCTAAGGGAAACTCTCAAAACATACAGCAACTGGCCTACGTTTCCTCAAATCTTCGTGGATGGCCAATTAATTGGAGGTTGTGACATTCTTAATTCTATGCATGAAAAAGGTGAACTTGCTGGTTTGTTAAAGAACTGA MAAISLPLLLTPPPLHIFSIKSSQSTSKFLPFSQSNPSPLLSGSSKLYTAAKGRTSSLIAFAAKNLSESELNSLPQSVGEIAGKFPSDAGVYAVYDKDDDVQFIGITRNIAGSVATHWKSVPELCVSVKFGVVDEPDRTTLTQAWKSWMEEHIKATGKVPPGNESGNATWVRQPPKKKADLRLTPGRHVQLTVPLEDLIDQLVKENKVVAFIKGSRSAPLCGFSQRVIGILEAEGVDYESVDVLDEEYNNGLRETLKTYSNWPTFPQIFVDGQLIGGCDILNSMHEKGELAGLLKN Homology
BLAST of CaUC10G199630 vs. NCBI nr
Match: XP_038906340.1 (bifunctional monothiol glutaredoxin-S16, chloroplastic [Benincasa hispida]) HSP 1 Score: 544.7 bits (1402), Expect = 5.1e-151 Identity = 270/296 (91.22%), Postives = 281/296 (94.93%), Query Frame = 0
BLAST of CaUC10G199630 vs. NCBI nr
Match: XP_022949016.1 (bifunctional monothiol glutaredoxin-S16, chloroplastic [Cucurbita moschata] >KAG6596337.1 Bifunctional monothiol glutaredoxin-S16, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027889.1 Bifunctional monothiol glutaredoxin-S16, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 541.6 bits (1394), Expect = 4.3e-150 Identity = 270/296 (91.22%), Postives = 281/296 (94.93%), Query Frame = 0
BLAST of CaUC10G199630 vs. NCBI nr
Match: XP_022971349.1 (bifunctional monothiol glutaredoxin-S16, chloroplastic [Cucurbita maxima]) HSP 1 Score: 540.8 bits (1392), Expect = 7.3e-150 Identity = 270/296 (91.22%), Postives = 281/296 (94.93%), Query Frame = 0
BLAST of CaUC10G199630 vs. NCBI nr
Match: XP_004137706.1 (bifunctional monothiol glutaredoxin-S16, chloroplastic [Cucumis sativus] >KGN58741.1 hypothetical protein Csa_001627 [Cucumis sativus]) HSP 1 Score: 538.5 bits (1386), Expect = 3.6e-149 Identity = 264/295 (89.49%), Postives = 278/295 (94.24%), Query Frame = 0
BLAST of CaUC10G199630 vs. NCBI nr
Match: XP_023538757.1 (bifunctional monothiol glutaredoxin-S16, chloroplastic [Cucurbita pepo subsp. pepo]) HSP 1 Score: 536.2 bits (1380), Expect = 1.8e-148 Identity = 266/296 (89.86%), Postives = 280/296 (94.59%), Query Frame = 0
BLAST of CaUC10G199630 vs. ExPASy Swiss-Prot
Match: Q8H7F6 (Bifunctional monothiol glutaredoxin-S16, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GRXS16 PE=1 SV=2) HSP 1 Score: 360.1 bits (923), Expect = 2.3e-98 Identity = 181/275 (65.82%), Postives = 222/275 (80.73%), Query Frame = 0
BLAST of CaUC10G199630 vs. ExPASy Swiss-Prot
Match: Q2QX01 (Monothiol glutaredoxin-S12, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS12 PE=2 SV=1) HSP 1 Score: 313.2 bits (801), Expect = 3.3e-84 Identity = 168/282 (59.57%), Postives = 200/282 (70.92%), Query Frame = 0
BLAST of CaUC10G199630 vs. ExPASy Swiss-Prot
Match: Q6PBM1 (Glutaredoxin-related protein 5, mitochondrial OS=Danio rerio OX=7955 GN=glrx5 PE=2 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 3.2e-23 Identity = 53/125 (42.40%), Postives = 84/125 (67.20%), Query Frame = 0
BLAST of CaUC10G199630 vs. ExPASy Swiss-Prot
Match: Q68W05 (Probable monothiol glutaredoxin 2 OS=Rickettsia typhi (strain ATCC VR-144 / Wilmington) OX=257363 GN=grxC2 PE=3 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 4.2e-23 Identity = 45/98 (45.92%), Postives = 71/98 (72.45%), Query Frame = 0
BLAST of CaUC10G199630 vs. ExPASy Swiss-Prot
Match: Q0IWL9 (Monothiol glutaredoxin-S11 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS11 PE=2 SV=2) HSP 1 Score: 109.4 bits (272), Expect = 7.1e-23 Identity = 47/101 (46.53%), Postives = 71/101 (70.30%), Query Frame = 0
BLAST of CaUC10G199630 vs. ExPASy TrEMBL
Match: A0A6J1GAT7 (bifunctional monothiol glutaredoxin-S16, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111452232 PE=3 SV=1) HSP 1 Score: 541.6 bits (1394), Expect = 2.1e-150 Identity = 270/296 (91.22%), Postives = 281/296 (94.93%), Query Frame = 0
BLAST of CaUC10G199630 vs. ExPASy TrEMBL
Match: A0A6J1I8B1 (bifunctional monothiol glutaredoxin-S16, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111470101 PE=3 SV=1) HSP 1 Score: 540.8 bits (1392), Expect = 3.5e-150 Identity = 270/296 (91.22%), Postives = 281/296 (94.93%), Query Frame = 0
BLAST of CaUC10G199630 vs. ExPASy TrEMBL
Match: A0A0A0LF87 (Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G731030 PE=3 SV=1) HSP 1 Score: 538.5 bits (1386), Expect = 1.8e-149 Identity = 264/295 (89.49%), Postives = 278/295 (94.24%), Query Frame = 0
BLAST of CaUC10G199630 vs. ExPASy TrEMBL
Match: A0A5D3DMV3 (Bifunctional monothiol glutaredoxin-S16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00630 PE=3 SV=1) HSP 1 Score: 520.0 bits (1338), Expect = 6.5e-144 Identity = 258/295 (87.46%), Postives = 272/295 (92.20%), Query Frame = 0
BLAST of CaUC10G199630 vs. ExPASy TrEMBL
Match: A0A1S3B6C9 (bifunctional monothiol glutaredoxin-S16, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103486275 PE=3 SV=1) HSP 1 Score: 520.0 bits (1338), Expect = 6.5e-144 Identity = 258/295 (87.46%), Postives = 272/295 (92.20%), Query Frame = 0
BLAST of CaUC10G199630 vs. TAIR 10
Match: AT2G38270.1 (CAX-interacting protein 2 ) HSP 1 Score: 360.1 bits (923), Expect = 1.6e-99 Identity = 181/275 (65.82%), Postives = 222/275 (80.73%), Query Frame = 0
BLAST of CaUC10G199630 vs. TAIR 10
Match: AT3G54900.1 (CAX interacting protein 1 ) HSP 1 Score: 104.8 bits (260), Expect = 1.2e-22 Identity = 48/100 (48.00%), Postives = 67/100 (67.00%), Query Frame = 0
BLAST of CaUC10G199630 vs. TAIR 10
Match: AT4G04950.1 (thioredoxin family protein ) HSP 1 Score: 100.5 bits (249), Expect = 2.4e-21 Identity = 51/150 (34.00%), Postives = 82/150 (54.67%), Query Frame = 0
BLAST of CaUC10G199630 vs. TAIR 10
Match: AT3G15660.1 (glutaredoxin 4 ) HSP 1 Score: 95.5 bits (236), Expect = 7.6e-20 Identity = 42/105 (40.00%), Postives = 71/105 (67.62%), Query Frame = 0
BLAST of CaUC10G199630 vs. TAIR 10
Match: AT3G15660.2 (glutaredoxin 4 ) HSP 1 Score: 95.5 bits (236), Expect = 7.6e-20 Identity = 42/105 (40.00%), Postives = 71/105 (67.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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