CaUC10G199330 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCAAGGAAAGCGAGCAAACGGGTCAGCTTCAGTCCTGATGTGAATGACAAGCCAACAGTCGTGCTCAAACACAGCGGCGGTGACGGCGGAGCCGGCATATGGAGCTTTGGCCTGAGCAGAGACACAAGGTACTTGCCGGTGAGGTTTCTACAGAGCCTCAAGGCCAGAGTAAGTGAAGCAATCCGCTTTGTATCAACAAGAAAATCTTCACGAAAGGTTTCTTCAGCCTCCACTTTTACAAGGTCAAGATCGGTCTCGGATTCCATGGACTCGCATCGAGCTGAAGCCATTGAAGATTGCATCGAGTTCTTAAACCACTCTTCATCTTTGTCCAGATCAAATTCAGTCTCTGGAAGTACTTACTGA ATGTCAAGGAAAGCGAGCAAACGGGTCAGCTTCAGTCCTGATGTGAATGACAAGCCAACAGTCGTGCTCAAACACAGCGGCGGTGACGGCGGAGCCGGCATATGGAGCTTTGGCCTGAGCAGAGACACAAGGTACTTGCCGGTGAGGTTTCTACAGAGCCTCAAGGCCAGAGTAAGTGAAGCAATCCGCTTTGTATCAACAAGAAAATCTTCACGAAAGGTTTCTTCAGCCTCCACTTTTACAAGGTCAAGATCGGTCTCGGATTCCATGGACTCGCATCGAGCTGAAGCCATTGAAGATTGCATCGAGTTCTTAAACCACTCTTCATCTTTGTCCAGATCAAATTCAGTCTCTGGAAGTACTTACTGA ATGTCAAGGAAAGCGAGCAAACGGGTCAGCTTCAGTCCTGATGTGAATGACAAGCCAACAGTCGTGCTCAAACACAGCGGCGGTGACGGCGGAGCCGGCATATGGAGCTTTGGCCTGAGCAGAGACACAAGGTACTTGCCGGTGAGGTTTCTACAGAGCCTCAAGGCCAGAGTAAGTGAAGCAATCCGCTTTGTATCAACAAGAAAATCTTCACGAAAGGTTTCTTCAGCCTCCACTTTTACAAGGTCAAGATCGGTCTCGGATTCCATGGACTCGCATCGAGCTGAAGCCATTGAAGATTGCATCGAGTTCTTAAACCACTCTTCATCTTTGTCCAGATCAAATTCAGTCTCTGGAAGTACTTACTGA MSRKASKRVSFSPDVNDKPTVVLKHSGGDGGAGIWSFGLSRDTRYLPVRFLQSLKARVSEAIRFVSTRKSSRKVSSASTFTRSRSVSDSMDSHRAEAIEDCIEFLNHSSSLSRSNSVSGSTY Homology
BLAST of CaUC10G199330 vs. NCBI nr
Match: XP_038903233.1 (josephin-like protein [Benincasa hispida]) HSP 1 Score: 228.4 bits (581), Expect = 3.3e-56 Identity = 121/122 (99.18%), Postives = 121/122 (99.18%), Query Frame = 0
BLAST of CaUC10G199330 vs. NCBI nr
Match: XP_008442460.1 (PREDICTED: josephin-like protein [Cucumis melo] >KAA0044156.1 josephin-like protein [Cucumis melo var. makuwa] >TYK24979.1 josephin-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 221.5 bits (563), Expect = 4.0e-54 Identity = 119/123 (96.75%), Postives = 122/123 (99.19%), Query Frame = 0
BLAST of CaUC10G199330 vs. NCBI nr
Match: XP_004137733.1 (josephin-like protein [Cucumis sativus] >KGN58786.1 hypothetical protein Csa_001490 [Cucumis sativus]) HSP 1 Score: 217.2 bits (552), Expect = 7.6e-53 Identity = 117/123 (95.12%), Postives = 120/123 (97.56%), Query Frame = 0
BLAST of CaUC10G199330 vs. NCBI nr
Match: KAG6580487.1 (hypothetical protein SDJN03_20489, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 215.7 bits (548), Expect = 2.2e-52 Identity = 117/124 (94.35%), Postives = 119/124 (95.97%), Query Frame = 0
BLAST of CaUC10G199330 vs. NCBI nr
Match: XP_022145644.1 (josephin-like protein [Momordica charantia]) HSP 1 Score: 214.9 bits (546), Expect = 3.8e-52 Identity = 116/124 (93.55%), Postives = 120/124 (96.77%), Query Frame = 0
BLAST of CaUC10G199330 vs. ExPASy Swiss-Prot
Match: O82391 (Josephin-like protein OS=Arabidopsis thaliana OX=3702 GN=At2g29640 PE=2 SV=1) HSP 1 Score: 45.4 bits (106), Expect = 5.2e-04 Identity = 32/89 (35.96%), Postives = 45/89 (50.56%), Query Frame = 0
BLAST of CaUC10G199330 vs. ExPASy TrEMBL
Match: A0A5D3DNT5 (Josephin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00960 PE=4 SV=1) HSP 1 Score: 221.5 bits (563), Expect = 2.0e-54 Identity = 119/123 (96.75%), Postives = 122/123 (99.19%), Query Frame = 0
BLAST of CaUC10G199330 vs. ExPASy TrEMBL
Match: A0A1S3B5Q5 (josephin-like protein OS=Cucumis melo OX=3656 GN=LOC103486317 PE=4 SV=1) HSP 1 Score: 221.5 bits (563), Expect = 2.0e-54 Identity = 119/123 (96.75%), Postives = 122/123 (99.19%), Query Frame = 0
BLAST of CaUC10G199330 vs. ExPASy TrEMBL
Match: A0A0A0LFD2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G732440 PE=4 SV=1) HSP 1 Score: 217.2 bits (552), Expect = 3.7e-53 Identity = 117/123 (95.12%), Postives = 120/123 (97.56%), Query Frame = 0
BLAST of CaUC10G199330 vs. ExPASy TrEMBL
Match: A0A6J1CVV1 (josephin-like protein OS=Momordica charantia OX=3673 GN=LOC111015044 PE=4 SV=1) HSP 1 Score: 214.9 bits (546), Expect = 1.8e-52 Identity = 116/124 (93.55%), Postives = 120/124 (96.77%), Query Frame = 0
BLAST of CaUC10G199330 vs. ExPASy TrEMBL
Match: A0A6J1I1K7 (uncharacterized protein LOC111470059 OS=Cucurbita maxima OX=3661 GN=LOC111470059 PE=4 SV=1) HSP 1 Score: 205.3 bits (521), Expect = 1.5e-49 Identity = 110/122 (90.16%), Postives = 115/122 (94.26%), Query Frame = 0
BLAST of CaUC10G199330 vs. TAIR 10
Match: AT5G01225.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G09032.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 80.5 bits (197), Expect = 1.0e-15 Identity = 63/133 (47.37%), Postives = 80/133 (60.15%), Query Frame = 0
BLAST of CaUC10G199330 vs. TAIR 10
Match: AT3G09032.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G01225.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 73.2 bits (178), Expect = 1.7e-13 Identity = 63/147 (42.86%), Postives = 81/147 (55.10%), Query Frame = 0
BLAST of CaUC10G199330 vs. TAIR 10
Match: AT1G07300.1 (josephin protein-related ) HSP 1 Score: 53.5 bits (127), Expect = 1.4e-07 Identity = 35/84 (41.67%), Postives = 50/84 (59.52%), Query Frame = 0
BLAST of CaUC10G199330 vs. TAIR 10
Match: AT2G29640.1 (JOSEPHIN-like protein ) HSP 1 Score: 45.4 bits (106), Expect = 3.7e-05 Identity = 32/89 (35.96%), Postives = 45/89 (50.56%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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