CaUC10G198910 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC10G198910
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionLegume-specific protein
LocationCiama_Chr10: 34289586 .. 34289849 (+)
RNA-Seq ExpressionCaUC10G198910
SyntenyCaUC10G198910
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGGTCTAATTCCCTTTGTTTACAAAGCCATCGTTCAATACAAGAATGAAAAACAAGTACCGGCGATCCGATCTTGGCTCTGCGACTCCCCCTCCGCCTCCTACATCAGACTTCCCAGTGGTGATTCCGGCCGATTTCAGTTCCAATCCGATGGCTCGCCTTCTTCAAAATCACCCTCTTCCACCGCCACCCAGATTCTGGTTTCCACCGGAGTTCAATCGCCGCTCCGCCATCTGACGACTCGACGGGTTGCCGCCTAA

mRNA sequence

ATGGAAGGTCTAATTCCCTTTGTTTACAAAGCCATCGTTCAATACAAGAATGAAAAACAAGTACCGGCGATCCGATCTTGGCTCTGCGACTCCCCCTCCGCCTCCTACATCAGACTTCCCAGTGGTGATTCCGGCCGATTTCAGTTCCAATCCGATGGCTCGCCTTCTTCAAAATCACCCTCTTCCACCGCCACCCAGATTCTGGTTTCCACCGGAGTTCAATCGCCGCTCCGCCATCTGACGACTCGACGGGTTGCCGCCTAA

Coding sequence (CDS)

ATGGAAGGTCTAATTCCCTTTGTTTACAAAGCCATCGTTCAATACAAGAATGAAAAACAAGTACCGGCGATCCGATCTTGGCTCTGCGACTCCCCCTCCGCCTCCTACATCAGACTTCCCAGTGGTGATTCCGGCCGATTTCAGTTCCAATCCGATGGCTCGCCTTCTTCAAAATCACCCTCTTCCACCGCCACCCAGATTCTGGTTTCCACCGGAGTTCAATCGCCGCTCCGCCATCTGACGACTCGACGGGTTGCCGCCTAA

Protein sequence

MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSASYIRLPSGDSGRFQFQSDGSPSSKSPSSTATQILVSTGVQSPLRHLTTRRVAA
Homology
BLAST of CaUC10G198910 vs. NCBI nr
Match: KAA0044116.1 (legume-specific protein [Cucumis melo var. makuwa] >TYK25022.1 legume-specific protein [Cucumis melo var. makuwa])

HSP 1 Score: 161.0 bits (406), Expect = 4.6e-36
Identity = 84/89 (94.38%), Postives = 85/89 (95.51%), Query Frame = 0

Query: 1  MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSASYIRLPSGDSGRFQFQSDGSPSSKSP 60
          MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPS SYIRLPSGDSGRFQFQSD SPSSKSP
Sbjct: 1  MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQSDASPSSKSP 60

Query: 61 --SSTATQILVSTGVQSPLRHLTTRRVAA 88
            S+TATQILVSTGVQSPLRHLTTRRVAA
Sbjct: 61 TSSTTATQILVSTGVQSPLRHLTTRRVAA 89

BLAST of CaUC10G198910 vs. NCBI nr
Match: KAE8650999.1 (hypothetical protein Csa_002313 [Cucumis sativus])

HSP 1 Score: 157.1 bits (396), Expect = 6.7e-35
Identity = 82/86 (95.35%), Postives = 82/86 (95.35%), Query Frame = 0

Query: 3   GLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSASYIRLPSGDSGRFQFQSDGSPSSKSP-S 62
           GLIPFVYKAIVQYKNEKQVPAIRSWLCDSPS SYIRLPSGDSGRFQFQSD SPSSKSP S
Sbjct: 109 GLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQSDASPSSKSPTS 168

Query: 63  STATQILVSTGVQSPLRHLTTRRVAA 88
           ST TQILVSTGVQSPLRHLTTRRVAA
Sbjct: 169 STTTQILVSTGVQSPLRHLTTRRVAA 194

BLAST of CaUC10G198910 vs. NCBI nr
Match: KAG7017269.1 (hypothetical protein SDJN02_19132, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 145.6 bits (366), Expect = 2.0e-31
Identity = 77/89 (86.52%), Postives = 79/89 (88.76%), Query Frame = 0

Query: 1  MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSASYIRLPSGDSGRFQ--FQSDGSPSSK 60
          MEG+IPFVYKAIVQYKNEKQVPAIRSWLCDSPS SYIRLPSGDSGRFQ    S  SPSSK
Sbjct: 1  MEGIIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQDGSYSAASPSSK 60

Query: 61 SPSSTATQILVSTGVQSPLRHLTTRRVAA 88
          S SST TQIL+STGVQSPLRHLT RRVAA
Sbjct: 61 SASSTTTQILISTGVQSPLRHLTPRRVAA 89

BLAST of CaUC10G198910 vs. NCBI nr
Match: KAG6580521.1 (hypothetical protein SDJN03_20523, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 144.1 bits (362), Expect = 5.9e-31
Identity = 76/89 (85.39%), Postives = 78/89 (87.64%), Query Frame = 0

Query: 1  MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSASYIRLPSGDSGRFQ--FQSDGSPSSK 60
          MEG+IPFVYKAIVQYKNEKQVPAIRSWLCDSPS SYIRLPSGDSGRFQ    S  SPSSK
Sbjct: 1  MEGIIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQDGSYSAASPSSK 60

Query: 61 SPSSTATQILVSTGVQSPLRHLTTRRVAA 88
          S SST TQIL+STGVQSPLRHLT RRV A
Sbjct: 61 SASSTTTQILISTGVQSPLRHLTPRRVVA 89

BLAST of CaUC10G198910 vs. NCBI nr
Match: KAG6596392.1 (hypothetical protein SDJN03_09572, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 133.3 bits (334), Expect = 1.0e-27
Identity = 73/91 (80.22%), Postives = 76/91 (83.52%), Query Frame = 0

Query: 1  MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSASYIRLPSGDSGRFQFQSDGS----PS 60
          MEGLIPFVY+AIV YKN+KQVP IRSWL DSPSASYIRLPSGDSGRF FQSDGS      
Sbjct: 1  MEGLIPFVYRAIVHYKNDKQVPPIRSWLTDSPSASYIRLPSGDSGRFLFQSDGSYTATSP 60

Query: 61 SKSPSSTATQILVSTGVQSPLRHLTTRRVAA 88
          SKS SSTATQILV+TGVQSPLR L   RVAA
Sbjct: 61 SKSVSSTATQILVATGVQSPLRQLAPSRVAA 91

BLAST of CaUC10G198910 vs. ExPASy TrEMBL
Match: A0A5D3DNC7 (Legume-specific protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001410 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 2.2e-36
Identity = 84/89 (94.38%), Postives = 85/89 (95.51%), Query Frame = 0

Query: 1  MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSASYIRLPSGDSGRFQFQSDGSPSSKSP 60
          MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPS SYIRLPSGDSGRFQFQSD SPSSKSP
Sbjct: 1  MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQSDASPSSKSP 60

Query: 61 --SSTATQILVSTGVQSPLRHLTTRRVAA 88
            S+TATQILVSTGVQSPLRHLTTRRVAA
Sbjct: 61 TSSTTATQILVSTGVQSPLRHLTTRRVAA 89

BLAST of CaUC10G198910 vs. ExPASy TrEMBL
Match: A0A0A0LD26 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G733930 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 2.2e-36
Identity = 84/88 (95.45%), Postives = 84/88 (95.45%), Query Frame = 0

Query: 1  MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSASYIRLPSGDSGRFQFQSDGSPSSKSP 60
          MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPS SYIRLPSGDSGRFQFQSD SPSSKSP
Sbjct: 1  MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQSDASPSSKSP 60

Query: 61 -SSTATQILVSTGVQSPLRHLTTRRVAA 88
           SST TQILVSTGVQSPLRHLTTRRVAA
Sbjct: 61 TSSTTTQILVSTGVQSPLRHLTTRRVAA 88

BLAST of CaUC10G198910 vs. ExPASy TrEMBL
Match: K7MT87 (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_18G187300 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 5.9e-21
Identity = 62/94 (65.96%), Postives = 73/94 (77.66%), Query Frame = 0

Query: 1  MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSASYIRLPSGDSGRFQFQ------SDGS 60
          MEGLIPFVYKAI+QYK +K    I SWLC+SPS SY+RLP+GDSGRFQ Q      S  S
Sbjct: 1  MEGLIPFVYKAIMQYKGDKDGHPIGSWLCESPSYSYMRLPAGDSGRFQIQAPASSFSAAS 60

Query: 61 PSSKSP-SSTATQILVSTGVQSPLRHLTTRRVAA 88
          PSS +P SS+ATQI+VS+GVQSP + LT RR+AA
Sbjct: 61 PSSTNPNSSSATQIIVSSGVQSPHQCLTHRRIAA 94

BLAST of CaUC10G198910 vs. ExPASy TrEMBL
Match: A0A0B2P904 (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_048924 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 3.8e-20
Identity = 61/94 (64.89%), Postives = 72/94 (76.60%), Query Frame = 0

Query: 1  MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSASYIRLPSGDSGRFQFQ------SDGS 60
          MEGLIPFVYKAI+QYK +K    I SWLC+SPS SY+RLP+GDSGRFQ Q      S  S
Sbjct: 1  MEGLIPFVYKAIMQYKGDKDGHPIGSWLCESPSYSYMRLPAGDSGRFQIQAPASSFSAAS 60

Query: 61 PSSKSP-SSTATQILVSTGVQSPLRHLTTRRVAA 88
          PSS +P SS+ATQI+VS+GVQSP + LT R +AA
Sbjct: 61 PSSTNPNSSSATQIIVSSGVQSPHQCLTHRPIAA 94

BLAST of CaUC10G198910 vs. ExPASy TrEMBL
Match: C6SZB5 (Uncharacterized protein OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 2.5e-19
Identity = 60/94 (63.83%), Postives = 71/94 (75.53%), Query Frame = 0

Query: 1  MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSASYIRLPSGDSGRFQFQ------SDGS 60
          ME LIPFVYKAI+QYK  K    I SWLC+SPS SY+RLP+GDSGRFQ +      S  S
Sbjct: 1  MESLIPFVYKAIMQYKGGKDGHPIGSWLCESPSYSYMRLPAGDSGRFQIRAPASSFSAAS 60

Query: 61 PSSKSP-SSTATQILVSTGVQSPLRHLTTRRVAA 88
          PSS +P SS+ATQI+VS+GVQSP + LT RR+AA
Sbjct: 61 PSSTNPNSSSATQIIVSSGVQSPHQCLTHRRIAA 94

BLAST of CaUC10G198910 vs. TAIR 10
Match: AT2G37750.1 (unknown protein; Has 21 Blast hits to 21 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 48.1 bits (113), Expect = 4.1e-06
Identity = 39/86 (45.35%), Postives = 46/86 (53.49%), Query Frame = 0

Query: 1  MEGLIPFVYKAIVQ--YKNEKQVPAIRSWLCDSPSASYIRLPSGDSGRF-----QFQSDG 60
          MEGLIP VYKA++Q  Y NE Q            S+ Y+RLP GDSGRF          G
Sbjct: 1  MEGLIPLVYKAVMQIRYGNESQ---------QLSSSYYVRLP-GDSGRFVRSDLDVSGPG 60

Query: 61 SPSSK--SPSSTATQILVSTGVQSPL 78
          S SS   S S++ T   V  GVQSP+
Sbjct: 61 SNSSNRASSSTSTTTFAVYAGVQSPV 76

BLAST of CaUC10G198910 vs. TAIR 10
Match: AT5G02090.1 (unknown protein; Has 30 Blast hits to 30 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 45.1 bits (105), Expect = 3.4e-05
Identity = 25/50 (50.00%), Postives = 31/50 (62.00%), Query Frame = 0

Query: 1  MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSAS--YIRLPSGDSGRFQ 49
          MEGLIPF+YKAIV YK E    ++      SPS +  Y+RLP   S RF+
Sbjct: 1  MEGLIPFLYKAIVMYKREGSFSSVLLSDHHSPSNAGYYMRLPGDSSSRFR 50

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0044116.14.6e-3694.38legume-specific protein [Cucumis melo var. makuwa] >TYK25022.1 legume-specific p... [more]
KAE8650999.16.7e-3595.35hypothetical protein Csa_002313 [Cucumis sativus][more]
KAG7017269.12.0e-3186.52hypothetical protein SDJN02_19132, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6580521.15.9e-3185.39hypothetical protein SDJN03_20523, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6596392.11.0e-2780.22hypothetical protein SDJN03_09572, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3DNC72.2e-3694.38Legume-specific protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0LD262.2e-3695.45Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G733930 PE=4 SV=1[more]
K7MT875.9e-2165.96Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_18G187300 PE=4 SV=1[more]
A0A0B2P9043.8e-2064.89Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_048924 PE=4 SV=1[more]
C6SZB52.5e-1963.83Uncharacterized protein OS=Glycine max OX=3847 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
AT2G37750.14.1e-0645.35unknown protein; Has 21 Blast hits to 21 proteins in 7 species: Archae - 0; Bact... [more]
AT5G02090.13.4e-0550.00unknown protein; Has 30 Blast hits to 30 proteins in 10 species: Archae - 0; Bac... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34670EXPRESSED PROTEINcoord: 1..87
NoneNo IPR availablePANTHERPTHR34670:SF10LEGUME-SPECIFIC PROTEINcoord: 1..87

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC10G198910.1CaUC10G198910.1mRNA