CaUC10G198440 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC10G198440
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Histone H2B
Location	Ciama_Chr10: 33919931 .. 33922833 (+)
RNA-Seq Expression	CaUC10G198440
Synteny	CaUC10G198440

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGCCAACTAAAGCCGAAAAGAAGCCCGCAGAGAAGAAGCCGGCCGAGAAAACCCCTTCCTCGGCGGAGAAGAAGCCTAAGGCCGAGAAGAAGATCGCCAAAGACGGTGGCGACAAGAAGAAGAAGAAGATCAAGAAGAGCACCGAGACTTACAAGATCTACATCTTCAAGGTTTTGAAGCAGGTTCATCCTGACATTGGAATCTCCAGCAAGGCAATGGGCATTATGAACAGTTTCATCAACGATATCTTCGAGAAACTTGCTCAAGAGGCTTCGAAATTGGCGAGATATAACAAGAAACCTACGATCACCTCACGGGAGATCCAGACCGCCGTTCGATTGGTGTTGCCTGGTGAGTTAGCCAAACACGCTGTATCTGAAGGAACTAAGGCGGTAACCAAATTTACAAGCTCTTAGATTCCGGAGTCGTGAATTTTGGAGTTAGGGTTACGTTTTCGTTATTTTGTTGTGTAGATCCTGGTTTCTCTCTGGTCATAGGTGTATCGAACTAATAGTTTTAATGAATAACAAGTTTTTTCATATCTCTTTTCTTTAGCAAATGCTGATAATTTAATGAATCTCGGACGGAACTAGGGTTTATGCAGATCCGATCGGCAGTTCTGTTTTGAATTCTCTTAATTTTCTGATTCGATTATTTAATAGTTCTATGCATTAACATGACCTACGAGCAGTCAAAGAGAATGTACGTCATTGATTGTGATTGCTTTTGCTTGTTTCTTACTTCTCGTGATGGAAAGAGGATAAGAATATATAATTAAATGGAATTGGAATTTGGAGTCTGGATCAAAGTAAAAGTTGAAATGCGTGTTAAAATAACTCAATTATTTTTGTTCTTTACTATAGAAGTTTGCGCGATTATCCAAACTATATTTCCGAAATATCTTCCACGAGCGGGCCTTTTAAGCACTTGAATTGTACTTCAAATAATTTGCACTAAAAAATCAAGCTTCTTAAACTAAAAAGTTCAATGAAAAGCTTTAATTTTCTTGATTCATCATATTACTTGGAACTACGAGAAGAGGTCAGAAAGGCTGGAAGTTAGAATTTGCTTAGAAATTCATTCCCCCATGTAACTCTAGAAGGTAGTGTGTGTGAAGAAAAATGAAAACAAAAAGCATAAATTCAAAAAAATACAAATGGGTGCAACTTTGGTGCACATAGGAGAGAAATAAGACCTTTCCTAAGTTTAACTAGAAAGTTGTTTGCTTTATGCTTAGCCTTGGAAGTTCTCCAGAGATTGTTTAGAAGCATACAATAATAGAAATTAACTAAGTCATTATATAACAAAAATTGAGATGAAAATTCTTATGATGGTTATTACTTATTATTAAAGTTTAGTGACTGAAAAAAAAGTACTTTTTAACCTTCATTACATGTTGGCCTAATCTAGTAGATAACTACTACTATACCAATTGTTTGAAGGGATGGAATTCTTCTATGGTTAAAAATATATTATTAGTATAATTTTTTTTCTTTTCTTTTTTTAAAATTTGAAAAAAGAAGAAACAAATTAAACACTACAATTGTTACAACTTCCAGCCTCTCTAATAATGGAGGAGATCCAAGACCATCAAAAGACCAAACAAAATTAACATCTTGTATGGAAGACTAAAACCAAAAACGACATGAGCAAGACAACCCTCCAAAGAGGAAGATCAATAATCTAGGCACACAAAATTTCCAAACTATCCCCAACCACAGCAAAGGCCGACCAAGATAGCTGTGGCTTCAAAGCACTTTGACCCTCCATTTTGACTTCAATCCGCACCAATTGGAGATTCTGACTATATTTTAACTTTTAAAACATAAAAGAATAAATTCTAAATACCCAAACAAATTTGTAATTTAACCCTTAAAAAAATATATATACATATTCATCAAACTTTACTATTTGTTTAATTACAATTAAAAAGATATTTGGAAATGGGCTTTTAAAGAAGCAGGCCCGGCCCAATAGAGTAATGTTGGAAATATCTAAAAAAACAAATAAATCAGCGAATTGTCAAAGGAAAAAGACGTGGAGAATTGTGATTGGGTGTCGCAGCTATATCTACGCGACCGATTCCTTTCCCTTGACCGAAAGGATTAGTTCCGTAAGATCCCAATTCCGCCACCATTTTCGACCTCATCCTCCCAAAATTATCCGATCCACCTCCGCCTCCGCCGCCGTCGCATCTCCGCAGATCTTTTTCATCATGTTACGGATCAGATGATTTCCGGCTTGTCCTTTTGATTCAACGATTTCAGGTTCTCATGTTCTCAACCTTTGTGTTTTGATTCTCACATTTTCGATTTCTTTACAAAGTTTTCTTCAAGCTCTTGGCTCGCAAATCTGAGGTTTTGTTAGACCTTAAGAAAATTAGGGTTTCGAAGAGCATTCAGTATGCCTTCGGTACCTATTGATCTCTTCCTTGGCCCTCTGCTTCCTTCTTTGACTTCTTTTCATGGTGGTTCGTCCTCGCATCGTCTGAAGCGGCTCGAAAAGGGTGATCGGCGTGGTAATCTTAGTTAACATGGGGTTCTTTTAGTGCATTTCGTGCTCTATTCGTATTCTTCAATCTTCTCTTTCCTTCTCCTTGCTCTTCTGGTCCGTTCGAGGTTTGGAATTCCTAGAGAAATTATAGTTGTACGGTAAGGGTTTATTGTTTTGATCTTGATCTTGAGGTTTTTTTGGCGGTCGAAGCCTCTGAAAGCGAGTCACTGGTAATTGGCTACTCGTTGAGAGGGTTTTTGCATCCCTGATTATTGTGCGAGGTATTGTGCTATATTCTTTTTTATATTATTCTCAAGAAATTTACAGGCATAATATAGTTTTCACCTGGATCGAGTTTATTTCGGGGCATGTTTTACGATATCTTGGATATATGTGCAGGTTCTAG

mRNA sequence

ATGGCGCCAACTAAAGCCGAAAAGAAGCCCGCAGAGAAGAAGCCGGCCGAGAAAACCCCTTCCTCGGCGGAGAAGAAGCCTAAGGCCGAGAAGAAGATCGCCAAAGACGGTGGCGACAAGAAGAAGAAGAAGATCAAGAAGAGCACCGAGACTTACAAGATCTACATCTTCAAGGTTTTGAAGCAGGTTCATCCTGACATTGGAATCTCCAGCAAGGCAATGGGCATTATGAACAGTTTCATCAACGATATCTTCGAGAAACTTGCTCAAGAGGCTTCGAAATTGGCGAGATATAACAAGAAACCTACGATCACCTCACGGGAGATCCAGACCGCCGTTCGATTGGTGTTGCCTGATCCCAATTCCGCCACCATTTTCGACCTCATCCTCCCAAAATTATCCGATCCACCTCCGCCTCCGCCGCCGTCGCATCTCCGCAGATCTTTTTCATCATGTTACGGATCAGATGATTTCCGGCTTGTCCTTTTGATTCAACGATTTCAGACCTTAAGAAAATTAGGGTTTCGAAGAGCATTCAGTATGCCTTCGGTACCTATTGATCTCTTCCTTGGCCCTCTGCTTCCTTCTTTGACTTCTTTTCATGGTGGTTCGTCCTCGCATCGTCTGAAGCGGCTCGAAAAGGGTGATCGGCGTGAGGGTTTTTGCATCCCTGATTATTGTGCGAGGTTCTAG

Coding sequence (CDS)

ATGGCGCCAACTAAAGCCGAAAAGAAGCCCGCAGAGAAGAAGCCGGCCGAGAAAACCCCTTCCTCGGCGGAGAAGAAGCCTAAGGCCGAGAAGAAGATCGCCAAAGACGGTGGCGACAAGAAGAAGAAGAAGATCAAGAAGAGCACCGAGACTTACAAGATCTACATCTTCAAGGTTTTGAAGCAGGTTCATCCTGACATTGGAATCTCCAGCAAGGCAATGGGCATTATGAACAGTTTCATCAACGATATCTTCGAGAAACTTGCTCAAGAGGCTTCGAAATTGGCGAGATATAACAAGAAACCTACGATCACCTCACGGGAGATCCAGACCGCCGTTCGATTGGTGTTGCCTGATCCCAATTCCGCCACCATTTTCGACCTCATCCTCCCAAAATTATCCGATCCACCTCCGCCTCCGCCGCCGTCGCATCTCCGCAGATCTTTTTCATCATGTTACGGATCAGATGATTTCCGGCTTGTCCTTTTGATTCAACGATTTCAGACCTTAAGAAAATTAGGGTTTCGAAGAGCATTCAGTATGCCTTCGGTACCTATTGATCTCTTCCTTGGCCCTCTGCTTCCTTCTTTGACTTCTTTTCATGGTGGTTCGTCCTCGCATCGTCTGAAGCGGCTCGAAAAGGGTGATCGGCGTGAGGGTTTTTGCATCCCTGATTATTGTGCGAGGTTCTAG

Protein sequence

MAPTKAEKKPAEKKPAEKTPSSAEKKPKAEKKIAKDGGDKKKKKIKKSTETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPDPNSATIFDLILPKLSDPPPPPPPSHLRRSFSSCYGSDDFRLVLLIQRFQTLRKLGFRRAFSMPSVPIDLFLGPLLPSLTSFHGGSSSHRLKRLEKGDRREGFCIPDYCARF

Homology

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BLAST of CaUC10G198440 vs. NCBI nr
Match: XP_038903506.1 (probable histone H2B.3 [Benincasa hispida])

HSP 1 Score: 210.3 bits (534), Expect = 1.8e-50
Identity = 117/118 (99.15%), Postives = 117/118 (99.15%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKPAEKTPSSAEKKPKAEKKIAKDGGDKKKKKIKKSTETYKIYIFKVL 60
           MAPTKAEKKPAEKKPAEK PSSAEKKPKAEKKIAKDGGDKKKKKIKKSTETYKIYIFKVL
Sbjct: 1   MAPTKAEKKPAEKKPAEKAPSSAEKKPKAEKKIAKDGGDKKKKKIKKSTETYKIYIFKVL 60

Query: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLP 119
           KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLP
Sbjct: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLP 118

[Close]

BLAST of CaUC10G198440 vs. NCBI nr
Match: XP_008442575.1 (PREDICTED: probable histone H2B.3 [Cucumis melo] >KAA0044072.1 histone H2B-like [Cucumis melo var. makuwa] >TYK25065.1 histone H2B-like [Cucumis melo var. makuwa])

HSP 1 Score: 209.9 bits (533), Expect = 2.3e-50
Identity = 117/118 (99.15%), Postives = 117/118 (99.15%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKPAEKTPSSAEKKPKAEKKIAKDGGDKKKKKIKKSTETYKIYIFKVL 60
           MAPTKAEKKPAEKKPAEKTPSSAEKKPKAEKKIAKD GDKKKKKIKKSTETYKIYIFKVL
Sbjct: 1   MAPTKAEKKPAEKKPAEKTPSSAEKKPKAEKKIAKDSGDKKKKKIKKSTETYKIYIFKVL 60

Query: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLP 119
           KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLP
Sbjct: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLP 118

[Close]

BLAST of CaUC10G198440 vs. NCBI nr
Match: XP_022958236.1 (probable histone H2B.3 [Cucurbita moschata] >XP_023005892.1 probable histone H2B.3 [Cucurbita maxima] >XP_023538865.1 probable histone H2B.3 [Cucurbita pepo subsp. pepo] >KAG6596423.1 Histone H2B.4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027965.1 Histone H2B.4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 207.6 bits (527), Expect = 1.1e-49
Identity = 115/118 (97.46%), Postives = 117/118 (99.15%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKPAEKTPSSAEKKPKAEKKIAKDGGDKKKKKIKKSTETYKIYIFKVL 60
           MAPTKAEKKPAEKKPAEKTP+SAEKKPKAEKKIAKD GDKKKKKIKKSTETYKIYIFKVL
Sbjct: 1   MAPTKAEKKPAEKKPAEKTPTSAEKKPKAEKKIAKDSGDKKKKKIKKSTETYKIYIFKVL 60

Query: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLP 119
           KQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SKLARYNKKPTITSREIQTAVRLVLP
Sbjct: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLP 118

[Close]

BLAST of CaUC10G198440 vs. NCBI nr
Match: XP_022935032.1 (probable histone H2B.3 [Cucurbita moschata] >XP_022982546.1 probable histone H2B.3 [Cucurbita maxima] >XP_023527987.1 probable histone H2B.3 [Cucurbita pepo subsp. pepo] >KAG6580565.1 Histone H2B.4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017318.1 Histone H2B.4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 205.7 bits (522), Expect = 4.3e-49
Identity = 114/118 (96.61%), Postives = 117/118 (99.15%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKPAEKTPSSAEKKPKAEKKIAKDGGDKKKKKIKKSTETYKIYIFKVL 60
           MAPTKAEKKPAEKKPAEKTP+S+EKK KAEKKIAKDGGDKKKKK+KKSTETYKIYIFKVL
Sbjct: 1   MAPTKAEKKPAEKKPAEKTPASSEKKLKAEKKIAKDGGDKKKKKVKKSTETYKIYIFKVL 60

Query: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLP 119
           KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLP
Sbjct: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLP 118

[Close]

BLAST of CaUC10G198440 vs. NCBI nr
Match: KAF4385352.1 (hypothetical protein G4B88_026635 [Cannabis sativa])

HSP 1 Score: 204.5 bits (519), Expect = 9.7e-49
Identity = 131/223 (58.74%), Postives = 146/223 (65.47%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKPAEKTPSSAEKKPKAEKKIAKDG-GDKKKKKIKKSTETYKIYIFKV 60
           MAPTK EK+PA    AEK P +AEK  K EKKI+K+G  DKKKKKIKKS ETYKIY+FKV
Sbjct: 1   MAPTKGEKRPA----AEKKPVAAEKTAKVEKKISKEGTSDKKKKKIKKSMETYKIYLFKV 60

Query: 61  LKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPD 120
           LKQVHPDIGIS KAMGIMNSFINDIFEKLAQE+S+LARYNKKPTITSREIQTAVRLVLP 
Sbjct: 61  LKQVHPDIGISGKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPG 120

Query: 121 PNSATIFDLILPKLSDPPPPPPPSHLRRSFSSCYGSDDFRLVLLIQRFQTLRKLGFRRAF 180
                                         +    S+  + V  + +     K+GF    
Sbjct: 121 ----------------------------ELAKHAVSEGTKAVTKVYK----GKVGFEEHR 180

Query: 181 SMPSVPIDLFLGPLLPSLTSFHGGSSSHRLKRLEKGDRREGFC 223
            MPSVPI     PLLP +TSFHGGS +HRLK LEK DRR   C
Sbjct: 181 IMPSVPI---RRPLLPCVTSFHGGSCTHRLKHLEKSDRRVSSC 184

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BLAST of CaUC10G198440 vs. ExPASy Swiss-Prot
Match: Q1SU99 (Probable histone H2B.3 OS=Medicago truncatula OX=3880 PE=3 SV=3)

HSP 1 Score: 183.3 bits (464), Expect = 3.0e-45
Identity = 105/119 (88.24%), Postives = 111/119 (93.28%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKPAEKTPSSAEKKPKAEKKIAKDG-GDKKKKKIKKSTETYKIYIFKV 60
           M PTKAEKKPAEKKPAEK P  AEKKPKAEKKI+K+G  DKKKK+ KKS ETYKIYIFKV
Sbjct: 1   MPPTKAEKKPAEKKPAEKAP--AEKKPKAEKKISKEGSSDKKKKRTKKSVETYKIYIFKV 60

Query: 61  LKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLP 119
           LKQVHPDIG+SSKAMGIMNSFINDIFEKLAQE+S+LARYNKKPTITSREIQTAVRLVLP
Sbjct: 61  LKQVHPDIGVSSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLP 117

[Close]

BLAST of CaUC10G198440 vs. ExPASy Swiss-Prot
Match: Q9ZUS0 (Histone H2B.4 OS=Arabidopsis thaliana OX=3702 GN=At2g37470 PE=1 SV=3)

HSP 1 Score: 175.3 bits (443), Expect = 8.2e-43
Identity = 103/120 (85.83%), Postives = 107/120 (89.17%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKPAEKTPSSAEKKPKAEKKIAKD--GGDKKKKKIKKSTETYKIYIFK 60
           MAP  AEKKPAEKKPA K P  AEK PKAEKKI+KD  G +KKKKK KKS ETYKIYIFK
Sbjct: 1   MAPKAAEKKPAEKKPAGKAP--AEKLPKAEKKISKDAGGSEKKKKKSKKSVETYKIYIFK 60

Query: 61  VLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLP 119
           VLKQVHPD+GIS KAMGIMNSFINDIFEKLAQE+SKLARYNKKPTITSREIQTAVRLVLP
Sbjct: 61  VLKQVHPDVGISGKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLP 118

[Close]

BLAST of CaUC10G198440 vs. ExPASy Swiss-Prot
Match: Q9LFF6 (Histone H2B.8 OS=Arabidopsis thaliana OX=3702 GN=At3g53650 PE=1 SV=3)

HSP 1 Score: 173.7 bits (439), Expect = 2.4e-42
Identity = 102/119 (85.71%), Postives = 107/119 (89.92%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKPAEKTPSSAEKKPKAEKKIAKDGG-DKKKKKIKKSTETYKIYIFKV 60
           MAP  AEKKPA KKPAEK P  AEK PKAEKKI K+GG +KKKKK KK+ ETYKIYIFKV
Sbjct: 1   MAPKAAEKKPAGKKPAEKAP--AEKLPKAEKKITKEGGSEKKKKKSKKNIETYKIYIFKV 60

Query: 61  LKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLP 119
           LKQVHPDIGIS KAMGIMNSFINDIFEKLAQE+S+LARYNKKPTITSREIQTAVRLVLP
Sbjct: 61  LKQVHPDIGISGKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLP 117

[Close]

BLAST of CaUC10G198440 vs. ExPASy Swiss-Prot
Match: O22582 (Histone H2B OS=Gossypium hirsutum OX=3635 GN=HIS2B PE=2 SV=3)

HSP 1 Score: 172.6 bits (436), Expect = 5.3e-42
Identity = 104/127 (81.89%), Postives = 111/127 (87.40%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKPAEK-----TPSSAEKKPKAEKKIAKDG----GDKKKKKIKKSTET 60
           MAP KAEKKPAEKKPAE+       + AEKKPKA KK+ K+G    GDKKKK++KKS ET
Sbjct: 1   MAP-KAEKKPAEKKPAEEKKAVAEKAPAEKKPKAGKKLPKEGGAAAGDKKKKRVKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQT 119
           YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEAS+LARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQT 120

[Close]

BLAST of CaUC10G198440 vs. ExPASy Swiss-Prot
Match: Q9SI96 (Histone H2B.3 OS=Arabidopsis thaliana OX=3702 GN=At2g28720 PE=1 SV=3)

HSP 1 Score: 171.8 bits (434), Expect = 9.1e-42
Identity = 105/131 (80.15%), Postives = 111/131 (84.73%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKPAEKTPSS---------AEKKPKAEKKIAKD----GGDKKKKKIKK 60
           MAP KA KKPAEKKPAEK P+          AEKKPKA KK+ K+    G +KKKK++KK
Sbjct: 1   MAP-KAGKKPAEKKPAEKAPAEEEKVAEKAPAEKKPKAGKKLPKEAVTGGVEKKKKRVKK 60

Query: 61  STETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSR 119
           STETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSR
Sbjct: 61  STETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSR 120

[Close]

BLAST of CaUC10G198440 vs. ExPASy TrEMBL
Match: A0A5D3DN75 (Histone H2B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001870 PE=3 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 1.1e-50
Identity = 117/118 (99.15%), Postives = 117/118 (99.15%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKPAEKTPSSAEKKPKAEKKIAKDGGDKKKKKIKKSTETYKIYIFKVL 60
           MAPTKAEKKPAEKKPAEKTPSSAEKKPKAEKKIAKD GDKKKKKIKKSTETYKIYIFKVL
Sbjct: 1   MAPTKAEKKPAEKKPAEKTPSSAEKKPKAEKKIAKDSGDKKKKKIKKSTETYKIYIFKVL 60

Query: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLP 119
           KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLP
Sbjct: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLP 118

[Close]

BLAST of CaUC10G198440 vs. ExPASy TrEMBL
Match: A0A1S3B6N1 (Histone H2B OS=Cucumis melo OX=3656 GN=LOC103486408 PE=3 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 1.1e-50
Identity = 117/118 (99.15%), Postives = 117/118 (99.15%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKPAEKTPSSAEKKPKAEKKIAKDGGDKKKKKIKKSTETYKIYIFKVL 60
           MAPTKAEKKPAEKKPAEKTPSSAEKKPKAEKKIAKD GDKKKKKIKKSTETYKIYIFKVL
Sbjct: 1   MAPTKAEKKPAEKKPAEKTPSSAEKKPKAEKKIAKDSGDKKKKKIKKSTETYKIYIFKVL 60

Query: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLP 119
           KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLP
Sbjct: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLP 118

[Close]

BLAST of CaUC10G198440 vs. ExPASy TrEMBL
Match: A0A6J1KUE6 (Histone H2B OS=Cucurbita maxima OX=3661 GN=LOC111498762 PE=3 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 5.5e-50
Identity = 115/118 (97.46%), Postives = 117/118 (99.15%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKPAEKTPSSAEKKPKAEKKIAKDGGDKKKKKIKKSTETYKIYIFKVL 60
           MAPTKAEKKPAEKKPAEKTP+SAEKKPKAEKKIAKD GDKKKKKIKKSTETYKIYIFKVL
Sbjct: 1   MAPTKAEKKPAEKKPAEKTPTSAEKKPKAEKKIAKDSGDKKKKKIKKSTETYKIYIFKVL 60

Query: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLP 119
           KQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SKLARYNKKPTITSREIQTAVRLVLP
Sbjct: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLP 118

[Close]

BLAST of CaUC10G198440 vs. ExPASy TrEMBL
Match: A0A6J1H1K6 (Histone H2B OS=Cucurbita moschata OX=3662 GN=LOC111459261 PE=3 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 5.5e-50
Identity = 115/118 (97.46%), Postives = 117/118 (99.15%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKPAEKTPSSAEKKPKAEKKIAKDGGDKKKKKIKKSTETYKIYIFKVL 60
           MAPTKAEKKPAEKKPAEKTP+SAEKKPKAEKKIAKD GDKKKKKIKKSTETYKIYIFKVL
Sbjct: 1   MAPTKAEKKPAEKKPAEKTPTSAEKKPKAEKKIAKDSGDKKKKKIKKSTETYKIYIFKVL 60

Query: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLP 119
           KQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SKLARYNKKPTITSREIQTAVRLVLP
Sbjct: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLP 118

[Close]

BLAST of CaUC10G198440 vs. ExPASy TrEMBL
Match: A0A6J1IZM1 (Histone H2B OS=Cucurbita maxima OX=3661 GN=LOC111481391 PE=3 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 2.1e-49
Identity = 114/118 (96.61%), Postives = 117/118 (99.15%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKPAEKTPSSAEKKPKAEKKIAKDGGDKKKKKIKKSTETYKIYIFKVL 60
           MAPTKAEKKPAEKKPAEKTP+S+EKK KAEKKIAKDGGDKKKKK+KKSTETYKIYIFKVL
Sbjct: 1   MAPTKAEKKPAEKKPAEKTPASSEKKLKAEKKIAKDGGDKKKKKVKKSTETYKIYIFKVL 60

Query: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLP 119
           KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLP
Sbjct: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLP 118

[Close]

BLAST of CaUC10G198440 vs. TAIR 10
Match: AT2G37470.1 (Histone superfamily protein )

HSP 1 Score: 175.3 bits (443), Expect = 5.8e-44
Identity = 103/120 (85.83%), Postives = 107/120 (89.17%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKPAEKTPSSAEKKPKAEKKIAKD--GGDKKKKKIKKSTETYKIYIFK 60
           MAP  AEKKPAEKKPA K P  AEK PKAEKKI+KD  G +KKKKK KKS ETYKIYIFK
Sbjct: 1   MAPKAAEKKPAEKKPAGKAP--AEKLPKAEKKISKDAGGSEKKKKKSKKSVETYKIYIFK 60

Query: 61  VLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLP 119
           VLKQVHPD+GIS KAMGIMNSFINDIFEKLAQE+SKLARYNKKPTITSREIQTAVRLVLP
Sbjct: 61  VLKQVHPDVGISGKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLP 118

[Close]

BLAST of CaUC10G198440 vs. TAIR 10
Match: AT3G53650.1 (Histone superfamily protein )

HSP 1 Score: 173.7 bits (439), Expect = 1.7e-43
Identity = 102/119 (85.71%), Postives = 107/119 (89.92%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKPAEKTPSSAEKKPKAEKKIAKDGG-DKKKKKIKKSTETYKIYIFKV 60
           MAP  AEKKPA KKPAEK P  AEK PKAEKKI K+GG +KKKKK KK+ ETYKIYIFKV
Sbjct: 1   MAPKAAEKKPAGKKPAEKAP--AEKLPKAEKKITKEGGSEKKKKKSKKNIETYKIYIFKV 60

Query: 61  LKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLP 119
           LKQVHPDIGIS KAMGIMNSFINDIFEKLAQE+S+LARYNKKPTITSREIQTAVRLVLP
Sbjct: 61  LKQVHPDIGISGKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLP 117

[Close]

BLAST of CaUC10G198440 vs. TAIR 10
Match: AT2G28720.1 (Histone superfamily protein )

HSP 1 Score: 171.8 bits (434), Expect = 6.5e-43
Identity = 105/131 (80.15%), Postives = 111/131 (84.73%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKPAEKTPSS---------AEKKPKAEKKIAKD----GGDKKKKKIKK 60
           MAP KA KKPAEKKPAEK P+          AEKKPKA KK+ K+    G +KKKK++KK
Sbjct: 1   MAP-KAGKKPAEKKPAEKAPAEEEKVAEKAPAEKKPKAGKKLPKEAVTGGVEKKKKRVKK 60

Query: 61  STETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSR 119
           STETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSR
Sbjct: 61  STETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSR 120

[Close]

BLAST of CaUC10G198440 vs. TAIR 10
Match: AT5G22880.1 (histone B2 )

HSP 1 Score: 170.2 bits (430), Expect = 1.9e-42
Identity = 100/122 (81.97%), Postives = 108/122 (88.52%), Query Frame = 0


Query: 5   KAEKKPAEKKPAEKTP-----SSAEKKPKAEKKIAKD---GGDKKKKKIKKSTETYKIYI 64
           KA+KKPAEKKPAEKTP     ++AEKKPKA KK+ K+    GDKKKK+ KK+ ETYKIYI
Sbjct: 3   KADKKPAEKKPAEKTPAAEPAAAAEKKPKAGKKLPKEPAGAGDKKKKRSKKNVETYKIYI 62

Query: 65  FKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLV 119
           FKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA E+SKLARYNKKPTITSREIQTAVRLV
Sbjct: 63  FKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAGESSKLARYNKKPTITSREIQTAVRLV 122

[Close]

BLAST of CaUC10G198440 vs. TAIR 10
Match: AT5G59910.1 (Histone superfamily protein )

HSP 1 Score: 170.2 bits (430), Expect = 1.9e-42
Identity = 105/130 (80.77%), Postives = 109/130 (83.85%), Query Frame = 0


Query: 1   MAPTKAEKKPAEKKPAEKTP---------SSAEKKPKAEKKIAKD---GGDKKKKKIKKS 60
           MAP KAEKKPAEKKPA + P         + AEKKPKA KK+ K+   GGDKKKK  KKS
Sbjct: 1   MAP-KAEKKPAEKKPASEKPVEEKSKAEKAPAEKKPKAGKKLPKEAGAGGDKKKKMKKKS 60

Query: 61  TETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSRE 119
            ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSRE
Sbjct: 61  VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSRE 120

The following BLAST results are available for this feature:

BLAST of CaUC10G198440 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903506.1	1.8e-50	99.15	probable histone H2B.3 [Benincasa hispida]	[more]
XP_008442575.1	2.3e-50	99.15	PREDICTED: probable histone H2B.3 [Cucumis melo] >KAA0044072.1 histone H2B-like ...	[more]
XP_022958236.1	1.1e-49	97.46	probable histone H2B.3 [Cucurbita moschata] >XP_023005892.1 probable histone H2B...	[more]
XP_022935032.1	4.3e-49	96.61	probable histone H2B.3 [Cucurbita moschata] >XP_022982546.1 probable histone H2B...	[more]
KAF4385352.1	9.7e-49	58.74	hypothetical protein G4B88_026635 [Cannabis sativa]	[more]

BLAST of CaUC10G198440 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1SU99	3.0e-45	88.24	Probable histone H2B.3 OS=Medicago truncatula OX=3880 PE=3 SV=3	[more]
Q9ZUS0	8.2e-43	85.83	Histone H2B.4 OS=Arabidopsis thaliana OX=3702 GN=At2g37470 PE=1 SV=3	[more]
Q9LFF6	2.4e-42	85.71	Histone H2B.8 OS=Arabidopsis thaliana OX=3702 GN=At3g53650 PE=1 SV=3	[more]
O22582	5.3e-42	81.89	Histone H2B OS=Gossypium hirsutum OX=3635 GN=HIS2B PE=2 SV=3	[more]
Q9SI96	9.1e-42	80.15	Histone H2B.3 OS=Arabidopsis thaliana OX=3702 GN=At2g28720 PE=1 SV=3	[more]

BLAST of CaUC10G198440 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DN75	1.1e-50	99.15	Histone H2B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001870 P...	[more]
A0A1S3B6N1	1.1e-50	99.15	Histone H2B OS=Cucumis melo OX=3656 GN=LOC103486408 PE=3 SV=1	[more]
A0A6J1KUE6	5.5e-50	97.46	Histone H2B OS=Cucurbita maxima OX=3661 GN=LOC111498762 PE=3 SV=1	[more]
A0A6J1H1K6	5.5e-50	97.46	Histone H2B OS=Cucurbita moschata OX=3662 GN=LOC111459261 PE=3 SV=1	[more]
A0A6J1IZM1	2.1e-49	96.61	Histone H2B OS=Cucurbita maxima OX=3661 GN=LOC111481391 PE=3 SV=1	[more]

BLAST of CaUC10G198440 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37470.1	5.8e-44	85.83	Histone superfamily protein	[more]
AT3G53650.1	1.7e-43	85.71	Histone superfamily protein	[more]
AT2G28720.1	6.5e-43	80.15	Histone superfamily protein	[more]
AT5G22880.1	1.9e-42	81.97	histone B2	[more]
AT5G59910.1	1.9e-42	80.77	Histone superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000558	Histone H2B	PRINTS	PR00621	HISTONEH2B	coord: 93..110 score: 76.51 coord: 52..70 score: 80.55 coord: 71..91 score: 75.74 coord: 110..123 score: 57.28
IPR000558	Histone H2B	SMART	SM00427	h2b3	coord: 42..128 e-value: 2.3E-45 score: 166.7
IPR000558	Histone H2B	PANTHER	PTHR23428	HISTONE H2B	coord: 5..119
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 3..124 e-value: 7.0E-46 score: 157.3
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 24..119
IPR007125	Histone H2A/H2B/H3	PFAM	PF00125	Histone	coord: 5..115 e-value: 8.2E-23 score: 81.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..42
None	No IPR available	PANTHER	PTHR23428:SF273	HISTONE H2B.4	coord: 5..119

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC10G198440.1	CaUC10G198440.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006334	nucleosome assembly
cellular_component	GO:0000786	nucleosome
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046982	protein heterodimerization activity