CaUC10G198190 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC10G198190
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Descriptionprotein REVEILLE 8-like isoform X2
LocationCiama_Chr10: 33696358 .. 33698497 (-)
RNA-Seq ExpressionCaUC10G198190
SyntenyCaUC10G198190
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAACAAGTTTATTAATTTATTAGTGCATAGAAAAACAAAATAACTGAAACTATTAAAACATATATGAGCGGAGCTCTATTTGTATGAGGATTGTACTATCGACTTTGATGTTAGAAGTTTGATTTCTGACTCAACGTATTTTAAAGATTACGAAATAAAATGTCAAAAGACTTAATAATCATCATTCAATTTTCAGGGACTATAAGTTTGTTTTTTTTGGAAACCATAATTAATTTGACAAATCTAAGCATAATTCAACACTGATGACGCATATGATTTTTCTTGATGTCGAATAATCAAACTTCGATGCTTCATCGTTTGTTAAAATGAAATAAAACGGGTTTAAATACTACTTTGGTTCTTATTCTTTCCGTTTTAATTTGTTTTGGTTTCTATACTTTCAAATTGTCATATTGGTTTATGTAGTTTCAATTTTAGTTTGTTTTGGTCTCTATACTTTAAATAGTAACCATTTTGGTTGCTTAAAATGTGAAAATGAAGTGACAAAAATTAAAATGGTAACTTTTTTAAATTACAGAGAAAAAACAGGCATTTCAAAAGTACAAATGACCAAAATAAATCAAAGCTAATATAAAGACAAAAAATAGTAGTTAAACTAATAAAATAATAATAAAAACTAACCATGAAGAATTGGAAAAAAGAAACAATATATAATTTACTTGAATTTAAAAAAAAAACATGCTAATTTTGAAAATTAAAAACTCGAGGTGGCAACAAATATCCGGTTGGCCCATACATTCAATAATATAAAAAAGGAATTATAACAGAAACTAGAAACCACAGTTTATATATTCCAATATATTTTATTCAAGAAATTGGGACGAGTAAATTTATGACTTAAAAAAAAAAAAAAAAATCACATTTAAAATTGAGCCTACAACGAGGAAGGGAATGTACGGCAGGCGATTAAATCGTTTCAATCGAACGCTCCCTAGCGGCCAACCAAACGAAAGGCGTCAAATTTCGCTCCACAAGTTCTCATTTCACAATTCACACCTTGCCCGCCATTGCTAGCTTCCTCCGTCTCTGCTCCGATTCAGCCTTATCATGCTCTGATTAACCTCATGAACTCCAACGCTTCGAATCCAAATCCTTCTATGGCGACTTCCAGTGCTGCTGATTCCTCCGGCAAGAAGGTTCGCAAGCCCTACACCATTACCAAGTCCAGAGAGAGCTGGACTGAAGAAGAGCACGATAAATTCCTCGAAGCTCTTCAGCTGTGAGTTTATTATGTTTGTTACTTGCAACTTTCTTAGAGGTTTTGTCTACTGATGTTTATGTCGAATTCTACCTCCCGAAACCAATATTCAAGTCTGATTTATGTTCCTCTTTTTTGGAAATCTGAATTGCTTTATAACTTCCGGAGGGAGCTTCATCTTCCTTATAGATTGTAGTTTTCATGATCCTGTTCCTCTTTTCCCGTCTCTGATGTTGAGGCTCTGTGGTTTGAGGATTTAGACTTCGAGTAACTGTGATGGTTTAAGTTTTGTTTTCCCGCTCTTCGTCATTCCACATCGCTTAATTGTGTTTCATTTACGAGTGTTTTAGTATCATCAATATGAAGCTATGATACTGATCTGTAATCGGCGTTTTATGTAGGTTAGAAAATCATTGACGTGAAATCAGAGTGTTGAAAGCTCTGTAGTTGTGCTTTTTCTATCATAGAATTGAAGTGTTAGAGAGGCAATTTTACGAGTTTGAGATGTAGAAATTCACTAGTCTAGTAACTGAAGAAAATTGGAGGAGAAATTTACGATTTCTGCAATTTTAGAACATATGTCAAATTTTCAGGTTTGATCGTGACTGGAAGAAAATTGAAGATTTTGTAGGTTCAAAGACAGTAATTCAGGTGAAAGATGGTCGGTTTGGTTTGTTGGAGCTTTTGCTCTTTGATTTCTTCCCACAACATGTTCTTTACTCTACAGTCGATGCTGCAGATTCGGAGTCACGCCCAAAAGTACTTTTTGAAAGTCCAAAAAAATGGAACGATAGCACATGTACCTCCACCACGCCCCAAACGCAAGGCTTCACATCCTTATCCACAAAAAGCATCAAAAAATGGTACGGAGATCTGATTCATAAGCAACACACATACTTCAAACCTCCTAATTACTGA

mRNA sequence

ATGGAACAACGGCCAACCAAACGAAAGGCGTCAAATTTCGCTCCACAAGTTCTCATTTCACAATTCACACCTTGCCCGCCATTGCTAGCTTCCTCCGTCTCTGCTCCGATTCAGCCTTATCATGCTCTGATTAACCTCATGAACTCCAACGCTTCGAATCCAAATCCTTCTATGGCGACTTCCAGTGCTGCTGATTCCTCCGGCAAGAAGGTTCGCAAGCCCTACACCATTACCAAGTCCAGAGAGAGCTGGACTGAAGAAGAGCACGATAAATTCCTCGAAGCTCTTCAGCTGTTTGATCGTGACTGGAAGAAAATTGAAGATTTTGTAGGTTCAAAGACAGTAATTCAGGTGAAAGATGGTCGGTTTGGTTTGTTGGAGCTTTTGCTCTTTGATTTCTTCCCACAACATGTTCTTTACTCTACAGTCGATGCTGCAGATTCGGAGTCACGCCCAAAAGTACTTTTTGAAAGTCCAAAAAAATGGAACGATAGCACATGTACCTCCACCACGCCCCAAACGCAAGGCTTCACATCCTTATCCACAAAAAGCATCAAAAAATGGTACGGAGATCTGATTCATAAGCAACACACATACTTCAAACCTCCTAATTACTGA

Coding sequence (CDS)

ATGGAACAACGGCCAACCAAACGAAAGGCGTCAAATTTCGCTCCACAAGTTCTCATTTCACAATTCACACCTTGCCCGCCATTGCTAGCTTCCTCCGTCTCTGCTCCGATTCAGCCTTATCATGCTCTGATTAACCTCATGAACTCCAACGCTTCGAATCCAAATCCTTCTATGGCGACTTCCAGTGCTGCTGATTCCTCCGGCAAGAAGGTTCGCAAGCCCTACACCATTACCAAGTCCAGAGAGAGCTGGACTGAAGAAGAGCACGATAAATTCCTCGAAGCTCTTCAGCTGTTTGATCGTGACTGGAAGAAAATTGAAGATTTTGTAGGTTCAAAGACAGTAATTCAGGTGAAAGATGGTCGGTTTGGTTTGTTGGAGCTTTTGCTCTTTGATTTCTTCCCACAACATGTTCTTTACTCTACAGTCGATGCTGCAGATTCGGAGTCACGCCCAAAAGTACTTTTTGAAAGTCCAAAAAAATGGAACGATAGCACATGTACCTCCACCACGCCCCAAACGCAAGGCTTCACATCCTTATCCACAAAAAGCATCAAAAAATGGTACGGAGATCTGATTCATAAGCAACACACATACTTCAAACCTCCTAATTACTGA

Protein sequence

MEQRPTKRKASNFAPQVLISQFTPCPPLLASSVSAPIQPYHALINLMNSNASNPNPSMATSSAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQVKDGRFGLLELLLFDFFPQHVLYSTVDAADSESRPKVLFESPKKWNDSTCTSTTPQTQGFTSLSTKSIKKWYGDLIHKQHTYFKPPNY
Homology
[Close]
BLAST of CaUC10G198190 vs. NCBI nr
Match: XP_038906059.1 (protein REVEILLE 8 isoform X4 [Benincasa hispida])

HSP 1 Score: 141.4 bits (355), Expect = 8.9e-30
Identity = 70/73 (95.89%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 47  MNSNASNPNPSMATSSAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKI 106
           MNSNASNPNPSMATS+AADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKI
Sbjct: 1   MNSNASNPNPSMATSTAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKI 60

Query: 107 EDFVGSKTVIQVK 120
           EDFVGSKTVIQ++
Sbjct: 61  EDFVGSKTVIQIR 73

[Close]
BLAST of CaUC10G198190 vs. NCBI nr
Match: XP_038906062.1 (protein REVEILLE 8 isoform X7 [Benincasa hispida])

HSP 1 Score: 141.4 bits (355), Expect = 8.9e-30
Identity = 70/73 (95.89%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 47  MNSNASNPNPSMATSSAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKI 106
           MNSNASNPNPSMATS+AADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKI
Sbjct: 1   MNSNASNPNPSMATSTAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKI 60

Query: 107 EDFVGSKTVIQVK 120
           EDFVGSKTVIQ++
Sbjct: 61  EDFVGSKTVIQIR 73

[Close]
BLAST of CaUC10G198190 vs. NCBI nr
Match: XP_038906057.1 (protein REVEILLE 8 isoform X2 [Benincasa hispida])

HSP 1 Score: 141.4 bits (355), Expect = 8.9e-30
Identity = 70/73 (95.89%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 47  MNSNASNPNPSMATSSAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKI 106
           MNSNASNPNPSMATS+AADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKI
Sbjct: 1   MNSNASNPNPSMATSTAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKI 60

Query: 107 EDFVGSKTVIQVK 120
           EDFVGSKTVIQ++
Sbjct: 61  EDFVGSKTVIQIR 73

[Close]
BLAST of CaUC10G198190 vs. NCBI nr
Match: XP_038906063.1 (protein REVEILLE 8 isoform X8 [Benincasa hispida] >XP_038906064.1 protein REVEILLE 8 isoform X8 [Benincasa hispida])

HSP 1 Score: 139.0 bits (349), Expect = 4.4e-29
Identity = 70/71 (98.59%), Postives = 71/71 (100.00%), Query Frame = 0 

Query: 47  MNSNASNPNPSMATSSAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKI 106
           MNSNASNPNPSMATS+AADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKI
Sbjct: 1   MNSNASNPNPSMATSTAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKI 60

Query: 107 EDFVGSKTVIQ 118
           EDFVGSKTVIQ
Sbjct: 61  EDFVGSKTVIQ 71

[Close]
BLAST of CaUC10G198190 vs. NCBI nr
Match: XP_038906061.1 (protein REVEILLE 8 isoform X6 [Benincasa hispida])

HSP 1 Score: 139.0 bits (349), Expect = 4.4e-29
Identity = 70/71 (98.59%), Postives = 71/71 (100.00%), Query Frame = 0 

Query: 47  MNSNASNPNPSMATSSAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKI 106
           MNSNASNPNPSMATS+AADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKI
Sbjct: 1   MNSNASNPNPSMATSTAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKI 60

Query: 107 EDFVGSKTVIQ 118
           EDFVGSKTVIQ
Sbjct: 61  EDFVGSKTVIQ 71

[Close]
BLAST of CaUC10G198190 vs. ExPASy Swiss-Prot
Match: Q8RWU3 (Protein REVEILLE 8 OS=Arabidopsis thaliana OX=3702 GN=RVE8 PE=2 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.7e-23
Identity = 57/75 (76.00%), Postives = 64/75 (85.33%), Query Frame = 0 

Query: 45  NLMNSNASNPNPSMATSSAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWK 104
           N  N+ A  P P+ +T + A+ S KKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWK
Sbjct: 8   NPTNAEAPPPPPT-STDAVAEGSSKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWK 67

Query: 105 KIEDFVGSKTVIQVK 120
           KIEDFVGSKTVIQ++
Sbjct: 68  KIEDFVGSKTVIQIR 81

[Close]
BLAST of CaUC10G198190 vs. ExPASy Swiss-Prot
Match: Q6R0G4 (Protein REVEILLE 4 OS=Arabidopsis thaliana OX=3702 GN=RVE4 PE=1 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 3.5e-21
Identity = 50/63 (79.37%), Postives = 57/63 (90.48%), Query Frame = 0 

Query: 57  SMATSSAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVI 116
           ++AT+ A ++  KKVRK YTITKSRESWTE EHDKFLEALQLFDRDWKKIEDFVGSKTVI
Sbjct: 24  TIATTEAGEAPEKKVRKAYTITKSRESWTEGEHDKFLEALQLFDRDWKKIEDFVGSKTVI 83

Query: 117 QVK 120
           Q++
Sbjct: 84  QIR 86

[Close]
BLAST of CaUC10G198190 vs. ExPASy Swiss-Prot
Match: Q8H0W3 (Protein REVEILLE 6 OS=Arabidopsis thaliana OX=3702 GN=RVE6 PE=2 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 3.0e-20
Identity = 50/63 (79.37%), Postives = 56/63 (88.89%), Query Frame = 0 

Query: 57  SMATSSAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVI 116
           +M +SS  D S KK+RKPYTITKSRESWTE EHDKFLEALQLFDRDWKKIE F+GSKTVI
Sbjct: 49  AMVSSSEEDLS-KKIRKPYTITKSRESWTEPEHDKFLEALQLFDRDWKKIEAFIGSKTVI 108

Query: 117 QVK 120
           Q++
Sbjct: 109 QIR 110

[Close]
BLAST of CaUC10G198190 vs. ExPASy Swiss-Prot
Match: Q6R0H0 (Protein REVEILLE 3 OS=Arabidopsis thaliana OX=3702 GN=RVE3 PE=2 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 7.4e-19
Identity = 47/63 (74.60%), Postives = 53/63 (84.13%), Query Frame = 0 

Query: 57  SMATSSAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVI 116
           S  T S  +   KKVRKPYTITKSRE+WTE+EHDKFLEAL LFDRDWKKI+ FVGSKTVI
Sbjct: 37  SNRTMSFFEDPTKKVRKPYTITKSRENWTEQEHDKFLEALHLFDRDWKKIKAFVGSKTVI 96

Query: 117 QVK 120
           Q++
Sbjct: 97  QIR 99

[Close]
BLAST of CaUC10G198190 vs. ExPASy Swiss-Prot
Match: C0SVG5 (Protein REVEILLE 5 OS=Arabidopsis thaliana OX=3702 GN=RVE5 PE=2 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.4e-17
Identity = 42/61 (68.85%), Postives = 52/61 (85.25%), Query Frame = 0 

Query: 59  ATSSAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQV 118
           +T S ++    K+RKPYTI KSRE+WT++EHDKFLEAL LFDRDWKKIE FVGSKTV+Q+
Sbjct: 37  STVSFSEDPTTKIRKPYTIKKSRENWTDQEHDKFLEALHLFDRDWKKIEAFVGSKTVVQI 96

Query: 119 K 120
           +
Sbjct: 97  R 97

[Close]
BLAST of CaUC10G198190 vs. ExPASy TrEMBL
Match: A0A5D3DNC4 (Protein REVEILLE 8-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G002220 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 3.7e-29
Identity = 68/73 (93.15%), Postives = 72/73 (98.63%), Query Frame = 0 

Query: 47  MNSNASNPNPSMATSSAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKI 106
           MNSNASNPNPSM +S+AADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKI
Sbjct: 1   MNSNASNPNPSMTSSTAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKI 60

Query: 107 EDFVGSKTVIQVK 120
           EDFVGSKTVIQ++
Sbjct: 61  EDFVGSKTVIQIR 73

[Close]
BLAST of CaUC10G198190 vs. ExPASy TrEMBL
Match: A0A0A0LFP1 (HTH myb-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G736740 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 3.7e-29
Identity = 68/73 (93.15%), Postives = 72/73 (98.63%), Query Frame = 0 

Query: 47  MNSNASNPNPSMATSSAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKI 106
           MNSNASNPNPSM +S+AADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKI
Sbjct: 1   MNSNASNPNPSMTSSTAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKI 60

Query: 107 EDFVGSKTVIQVK 120
           EDFVGSKTVIQ++
Sbjct: 61  EDFVGSKTVIQIR 73

[Close]
BLAST of CaUC10G198190 vs. ExPASy TrEMBL
Match: A0A1S3B648 (protein REVEILLE 8-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486443 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 3.7e-29
Identity = 68/73 (93.15%), Postives = 72/73 (98.63%), Query Frame = 0 

Query: 47  MNSNASNPNPSMATSSAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKI 106
           MNSNASNPNPSM +S+AADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKI
Sbjct: 1   MNSNASNPNPSMTSSTAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKI 60

Query: 107 EDFVGSKTVIQVK 120
           EDFVGSKTVIQ++
Sbjct: 61  EDFVGSKTVIQIR 73

[Close]
BLAST of CaUC10G198190 vs. ExPASy TrEMBL
Match: A0A6J1J2P2 (protein REVEILLE 8 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111482132 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 6.3e-29
Identity = 69/73 (94.52%), Postives = 72/73 (98.63%), Query Frame = 0 

Query: 47  MNSNASNPNPSMATSSAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKI 106
           MNSNASNP+ SMATSSAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKI
Sbjct: 1   MNSNASNPHTSMATSSAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKI 60

Query: 107 EDFVGSKTVIQVK 120
           EDFVGSKTVIQ++
Sbjct: 61  EDFVGSKTVIQIR 73

[Close]
BLAST of CaUC10G198190 vs. ExPASy TrEMBL
Match: A0A6J1F5X3 (protein REVEILLE 8 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111442398 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 6.3e-29
Identity = 69/73 (94.52%), Postives = 72/73 (98.63%), Query Frame = 0 

Query: 47  MNSNASNPNPSMATSSAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKI 106
           MNSNASNP+ SMATSSAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKI
Sbjct: 1   MNSNASNPHTSMATSSAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKI 60

Query: 107 EDFVGSKTVIQVK 120
           EDFVGSKTVIQ++
Sbjct: 61  EDFVGSKTVIQIR 73

[Close]
BLAST of CaUC10G198190 vs. TAIR 10
Match: AT3G09600.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 110.9 bits (276), Expect = 1.2e-24
Identity = 57/75 (76.00%), Postives = 64/75 (85.33%), Query Frame = 0 

Query: 45  NLMNSNASNPNPSMATSSAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWK 104
           N  N+ A  P P+ +T + A+ S KKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWK
Sbjct: 8   NPTNAEAPPPPPT-STDAVAEGSSKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWK 67

Query: 105 KIEDFVGSKTVIQVK 120
           KIEDFVGSKTVIQ++
Sbjct: 68  KIEDFVGSKTVIQIR 81

[Close]
BLAST of CaUC10G198190 vs. TAIR 10
Match: AT3G09600.2 (Homeodomain-like superfamily protein )

HSP 1 Score: 110.9 bits (276), Expect = 1.2e-24
Identity = 57/75 (76.00%), Postives = 64/75 (85.33%), Query Frame = 0 

Query: 45  NLMNSNASNPNPSMATSSAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWK 104
           N  N+ A  P P+ +T + A+ S KKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWK
Sbjct: 8   NPTNAEAPPPPPT-STDAVAEGSSKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWK 67

Query: 105 KIEDFVGSKTVIQVK 120
           KIEDFVGSKTVIQ++
Sbjct: 68  KIEDFVGSKTVIQIR 81

[Close]
BLAST of CaUC10G198190 vs. TAIR 10
Match: AT5G02840.1 (LHY/CCA1-like 1 )

HSP 1 Score: 103.2 bits (256), Expect = 2.5e-22
Identity = 50/63 (79.37%), Postives = 57/63 (90.48%), Query Frame = 0 

Query: 57  SMATSSAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVI 116
           ++AT+ A ++  KKVRK YTITKSRESWTE EHDKFLEALQLFDRDWKKIEDFVGSKTVI
Sbjct: 24  TIATTEAGEAPEKKVRKAYTITKSRESWTEGEHDKFLEALQLFDRDWKKIEDFVGSKTVI 83

Query: 117 QVK 120
           Q++
Sbjct: 84  QIR 86

[Close]
BLAST of CaUC10G198190 vs. TAIR 10
Match: AT5G02840.2 (LHY/CCA1-like 1 )

HSP 1 Score: 103.2 bits (256), Expect = 2.5e-22
Identity = 50/63 (79.37%), Postives = 57/63 (90.48%), Query Frame = 0 

Query: 57  SMATSSAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVI 116
           ++AT+ A ++  KKVRK YTITKSRESWTE EHDKFLEALQLFDRDWKKIEDFVGSKTVI
Sbjct: 24  TIATTEAGEAPEKKVRKAYTITKSRESWTEGEHDKFLEALQLFDRDWKKIEDFVGSKTVI 83

Query: 117 QVK 120
           Q++
Sbjct: 84  QIR 86

[Close]
BLAST of CaUC10G198190 vs. TAIR 10
Match: AT5G02840.3 (LHY/CCA1-like 1 )

HSP 1 Score: 103.2 bits (256), Expect = 2.5e-22
Identity = 50/63 (79.37%), Postives = 57/63 (90.48%), Query Frame = 0 

Query: 57  SMATSSAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVI 116
           ++AT+ A ++  KKVRK YTITKSRESWTE EHDKFLEALQLFDRDWKKIEDFVGSKTVI
Sbjct: 24  TIATTEAGEAPEKKVRKAYTITKSRESWTEGEHDKFLEALQLFDRDWKKIEDFVGSKTVI 83

Query: 117 QVK 120
           Q++
Sbjct: 84  QIR 86

The following BLAST results are available for this feature:
BLAST of CaUC10G198190 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038906059.18.9e-3095.89protein REVEILLE 8 isoform X4 [Benincasa hispida][more]
XP_038906062.18.9e-3095.89protein REVEILLE 8 isoform X7 [Benincasa hispida][more]
XP_038906057.18.9e-3095.89protein REVEILLE 8 isoform X2 [Benincasa hispida][more]
XP_038906063.14.4e-2998.59protein REVEILLE 8 isoform X8 [Benincasa hispida] >XP_038906064.1 protein REVEIL... [more]
XP_038906061.14.4e-2998.59protein REVEILLE 8 isoform X6 [Benincasa hispida][more]
BLAST of CaUC10G198190 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8RWU31.7e-2376.00Protein REVEILLE 8 OS=Arabidopsis thaliana OX=3702 GN=RVE8 PE=2 SV=1[more]
Q6R0G43.5e-2179.37Protein REVEILLE 4 OS=Arabidopsis thaliana OX=3702 GN=RVE4 PE=1 SV=1[more]
Q8H0W33.0e-2079.37Protein REVEILLE 6 OS=Arabidopsis thaliana OX=3702 GN=RVE6 PE=2 SV=1[more]
Q6R0H07.4e-1974.60Protein REVEILLE 3 OS=Arabidopsis thaliana OX=3702 GN=RVE3 PE=2 SV=1[more]
C0SVG51.4e-1768.85Protein REVEILLE 5 OS=Arabidopsis thaliana OX=3702 GN=RVE5 PE=2 SV=1[more]
BLAST of CaUC10G198190 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3DNC43.7e-2993.15Protein REVEILLE 8-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E56... [more]
A0A0A0LFP13.7e-2993.15HTH myb-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G73674... [more]
A0A1S3B6483.7e-2993.15protein REVEILLE 8-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486443 PE=4 ... [more]
A0A6J1J2P26.3e-2994.52protein REVEILLE 8 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111482132 PE=4 S... [more]
A0A6J1F5X36.3e-2994.52protein REVEILLE 8 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111442398 PE=4... [more]
BLAST of CaUC10G198190 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G09600.11.2e-2476.00Homeodomain-like superfamily protein [more]
AT3G09600.21.2e-2476.00Homeodomain-like superfamily protein [more]
AT5G02840.12.5e-2279.37LHY/CCA1-like 1 [more]
AT5G02840.22.5e-2279.37LHY/CCA1-like 1 [more]
AT5G02840.32.5e-2279.37LHY/CCA1-like 1 [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 80..129
e-value: 6.5E-6
score: 35.7
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 76..126
score: 6.005018
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 83..120
e-value: 4.17739E-8
score: 46.0294
NoneNo IPR availableGENE3D1.10.10.60coord: 84..123
e-value: 2.4E-12
score: 48.8
NoneNo IPR availablePANTHERPTHR12802SWI/SNF COMPLEX-RELATEDcoord: 48..119
NoneNo IPR availablePANTHERPTHR12802:SF115PROTEIN REVEILLE 8coord: 48..119
IPR017930Myb domainPFAMPF00249Myb_DNA-bindingcoord: 81..119
e-value: 6.5E-9
score: 35.9
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 76..120
score: 10.172221
IPR006447Myb domain, plantsTIGRFAMTIGR01557TIGR01557coord: 79..119
e-value: 5.4E-11
score: 40.6
IPR017884SANT domainPROSITEPS51293SANTcoord: 79..120
score: 11.548827
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 69..119

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC10G198190.1CaUC10G198190.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding