CaUC10G196850 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC10G196850
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Phytosulfokine-beta
Location	Ciama_Chr10: 32488731 .. 32489482 (+)
RNA-Seq Expression	CaUC10G196850
Synteny	CaUC10G196850

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTCCACTCCCACTGGACCTATTCCCCTGTTTTTCTTTCTAACAATCATTTCTTTCATTCTCACTCCAAAAACACAATTAAGAGACAGAGAAAAAAATGAACCAGAATTCCCATGGCTTCTTCTTCTTCTTTTTCATCTCTTTTCTCTTCATTTTCCTTCTCTTTTCTTCCCATTCAGCCTCTGCTCGTTTTCCACCATCCAAACAAGGTAAAACCCACTTATAAAAATCTTTCCTTTTTCTTGTGTTCATAAATTTAGAAGGAAAAAAAATTAAAAGTTCTTCCTTTTTCACTAAAAACTTACATTTTCTCACTCTTCCCTCTCTTTCCCTTTGATCTTCCTGGAAAATTTGCAGGTATAGAAGAAACCCACAAGAAGCTCAGCCATGGAATGGTCCAAGCAGATTCATGGCCAGATTCCCCCCATGTGAATAAATACCCTTTTTTTTATTTAATTTTCTTTTTCCAATTTTCTTCTTTGGATTTTAATGGGTTTTTGTTTTTTTTTTTGGTAGATAATGGGAGGAAGAGAGAATGGAGAAGAAGAAGAAGAAGAAGAATGGGAGAAGAGAAAGATGATGTTAGAAGCACATTTGGATTATGTTTACACACAAAATGAGAAGCCTTGAATCTAATTGAATTTTCAATGATATGTTTTATGTACATATCCAAATACTAAAAGAATTATTGCTGGTTTCATCATTTTATCATTTATGGATATATAGTTTTATATTGTTTACATGGTCTTCTTT

mRNA sequence

CCTCCACTCCCACTGGACCTATTCCCCTGTTTTTCTTTCTAACAATCATTTCTTTCATTCTCACTCCAAAAACACAATTAAGAGACAGAGAAAAAAATGAACCAGAATTCCCATGGCTTCTTCTTCTTCTTTTTCATCTCTTTTCTCTTCATTTTCCTTCTCTTTTCTTCCCATTCAGCCTCTGCTCGTTTTCCACCATCCAAACAAGGTATAGAAGAAACCCACAAGAAGCTCAGCCATGGAATGGTCCAAGCAGATTCATGGCCAGATTCCCCCCATATAATGGGAGGAAGAGAGAATGGAGAAGAAGAAGAAGAAGAAGAATGGGAGAAGAGAAAGATGATGTTAGAAGCACATTTGGATTATGTTTACACACAAAATGAGAAGCCTTGAATCTAATTGAATTTTCAATGATATGTTTTATGTACATATCCAAATACTAAAAGAATTATTGCTGGTTTCATCATTTTATCATTTATGGATATATAGTTTTATATTGTTTACATGGTCTTCTTT

Coding sequence (CDS)

ATGAACCAGAATTCCCATGGCTTCTTCTTCTTCTTTTTCATCTCTTTTCTCTTCATTTTCCTTCTCTTTTCTTCCCATTCAGCCTCTGCTCGTTTTCCACCATCCAAACAAGGTATAGAAGAAACCCACAAGAAGCTCAGCCATGGAATGGTCCAAGCAGATTCATGGCCAGATTCCCCCCATATAATGGGAGGAAGAGAGAATGGAGAAGAAGAAGAAGAAGAAGAATGGGAGAAGAGAAAGATGATGTTAGAAGCACATTTGGATTATGTTTACACACAAAATGAGAAGCCTTGA

Protein sequence

MNQNSHGFFFFFFISFLFIFLLFSSHSASARFPPSKQGIEETHKKLSHGMVQADSWPDSPHIMGGRENGEEEEEEEWEKRKMMLEAHLDYVYTQNEKP

Homology

[Close]

BLAST of CaUC10G196850 vs. NCBI nr
Match: XP_038906014.1 (uncharacterized protein LOC120091917 [Benincasa hispida])

HSP 1 Score: 179.1 bits (453), Expect = 1.9e-41
Identity = 92/107 (85.98%), Postives = 94/107 (87.85%), Query Frame = 0


Query: 1   MNQNSHGFFFFFFISFLFIFLLFSSHSASARFPPSKQGIEETHKKLSHGMVQADSWPDSP 60
           MNQNSHGFFFFFF+SFLFIFLLFSSHSASARFP SKQGIEETHKK+SHGMVQADSWPD P
Sbjct: 1   MNQNSHGFFFFFFLSFLFIFLLFSSHSASARFPSSKQGIEETHKKISHGMVQADSWPDFP 60

Query: 61  HIMGGRENG---------EEEEEEEWEKRKMMLEAHLDYVYTQNEKP 99
           HIMGGRE G         EEEEEEEWEK KMMLEAHLDYVYTQNEKP
Sbjct: 61  HIMGGREKGGGGGGGGEEEEEEEEEWEKGKMMLEAHLDYVYTQNEKP 107

[Close]

BLAST of CaUC10G196850 vs. NCBI nr
Match: XP_022935155.1 (uncharacterized protein LOC111442110 [Cucurbita moschata])

HSP 1 Score: 152.1 bits (383), Expect = 2.4e-33
Identity = 80/97 (82.47%), Postives = 86/97 (88.66%), Query Frame = 0


Query: 1  MNQNSHGFFFFFFISFLFIFLLFSSHSASARFPPSKQGIEETHKKLSHGMVQADSWPDSP 60
          MNQ+SHGFFFFFF SFLFIFLLF S SASARFP +KQG+ ETH+KL+HG VQADSWPD P
Sbjct: 1  MNQSSHGFFFFFFFSFLFIFLLF-SQSASARFPAAKQGLGETHEKLTHGGVQADSWPDFP 60

Query: 61 HIMGGRENGEEEEEEEWEKRKMMLEAHLDYVYTQNEK 98
          HI+GGRE G EEEEE WEKRKMMLEAHLDYVYTQN K
Sbjct: 61 HIIGGREKG-EEEEEGWEKRKMMLEAHLDYVYTQNVK 95

[Close]

BLAST of CaUC10G196850 vs. NCBI nr
Match: KAG6580671.1 (hypothetical protein SDJN03_20673, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 151.4 bits (381), Expect = 4.1e-33
Identity = 79/95 (83.16%), Postives = 85/95 (89.47%), Query Frame = 0


Query: 1  MNQNSHGFFFFFFISFLFIFLLFSSHSASARFPPSKQGIEETHKKLSHGMVQADSWPDSP 60
          MNQ+SHGFFFFFF SFLFIFLLF S SASARFP +KQG+ ETH+KL+HG VQADSWPD P
Sbjct: 1  MNQSSHGFFFFFFFSFLFIFLLF-SQSASARFPAAKQGLGETHEKLTHGGVQADSWPDFP 60

Query: 61 HIMGGRENGEEEEEEEWEKRKMMLEAHLDYVYTQN 96
          HI+GGRE G EEEEE WEKRKMMLEAHLDYVYTQN
Sbjct: 61 HIIGGREKG-EEEEEGWEKRKMMLEAHLDYVYTQN 93

[Close]

BLAST of CaUC10G196850 vs. NCBI nr
Match: XP_022983167.1 (uncharacterized protein LOC111481800 [Cucurbita maxima])

HSP 1 Score: 150.6 bits (379), Expect = 7.0e-33
Identity = 79/97 (81.44%), Postives = 86/97 (88.66%), Query Frame = 0


Query: 1  MNQNSHGFFFFFFISFLFIFLLFSSHSASARFPPSKQGIEETHKKLSHGMVQADSWPDSP 60
          MNQ+SHGFFFFFF SFLFIFLLF S S SARFP +KQG+ ETH+KL+HG+VQADSW D P
Sbjct: 1  MNQSSHGFFFFFF-SFLFIFLLF-SQSTSARFPAAKQGLGETHEKLTHGVVQADSWADFP 60

Query: 61 HIMGGRENGEEEEEEEWEKRKMMLEAHLDYVYTQNEK 98
          HI+GGRE GEEEEEE WEKRKMMLEAHLDYVYTQN K
Sbjct: 61 HIIGGREKGEEEEEEGWEKRKMMLEAHLDYVYTQNVK 95

[Close]

BLAST of CaUC10G196850 vs. NCBI nr
Match: XP_023528216.1 (putative phytosulfokines 6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 149.4 bits (376), Expect = 1.6e-32
Identity = 78/97 (80.41%), Postives = 86/97 (88.66%), Query Frame = 0


Query: 1  MNQNSHGFFFFFFISFLFIFLLFSSHSASARFPPSKQGIEETHKKLSHGMVQADSWPDSP 60
          MNQ+SHGFFFFFF SFLFIFLLF S SASARFP +KQG+ ETH+KL+HG+VQADSW D P
Sbjct: 1  MNQSSHGFFFFFFFSFLFIFLLF-SQSASARFPAAKQGLGETHEKLTHGVVQADSWADFP 60

Query: 61 HIMGGRENGEEEEEEEWEKRKMMLEAHLDYVYTQNEK 98
          H++GGRE G EEEEE WEKRKMMLEAHLDYVYTQN K
Sbjct: 61 HMIGGREKG-EEEEEGWEKRKMMLEAHLDYVYTQNVK 95

[Close]

BLAST of CaUC10G196850 vs. ExPASy TrEMBL
Match: A0A6J1F9T2 (Phytosulfokine-beta OS=Cucurbita moschata OX=3662 GN=LOC111442110 PE=3 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 1.2e-33
Identity = 80/97 (82.47%), Postives = 86/97 (88.66%), Query Frame = 0


Query: 1  MNQNSHGFFFFFFISFLFIFLLFSSHSASARFPPSKQGIEETHKKLSHGMVQADSWPDSP 60
          MNQ+SHGFFFFFF SFLFIFLLF S SASARFP +KQG+ ETH+KL+HG VQADSWPD P
Sbjct: 1  MNQSSHGFFFFFFFSFLFIFLLF-SQSASARFPAAKQGLGETHEKLTHGGVQADSWPDFP 60

Query: 61 HIMGGRENGEEEEEEEWEKRKMMLEAHLDYVYTQNEK 98
          HI+GGRE G EEEEE WEKRKMMLEAHLDYVYTQN K
Sbjct: 61 HIIGGREKG-EEEEEGWEKRKMMLEAHLDYVYTQNVK 95

[Close]

BLAST of CaUC10G196850 vs. ExPASy TrEMBL
Match: A0A6J1IYI6 (Phytosulfokine-beta OS=Cucurbita maxima OX=3661 GN=LOC111481800 PE=3 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 3.4e-33
Identity = 79/97 (81.44%), Postives = 86/97 (88.66%), Query Frame = 0


Query: 1  MNQNSHGFFFFFFISFLFIFLLFSSHSASARFPPSKQGIEETHKKLSHGMVQADSWPDSP 60
          MNQ+SHGFFFFFF SFLFIFLLF S S SARFP +KQG+ ETH+KL+HG+VQADSW D P
Sbjct: 1  MNQSSHGFFFFFF-SFLFIFLLF-SQSTSARFPAAKQGLGETHEKLTHGVVQADSWADFP 60

Query: 61 HIMGGRENGEEEEEEEWEKRKMMLEAHLDYVYTQNEK 98
          HI+GGRE GEEEEEE WEKRKMMLEAHLDYVYTQN K
Sbjct: 61 HIIGGREKGEEEEEEGWEKRKMMLEAHLDYVYTQNVK 95

[Close]

BLAST of CaUC10G196850 vs. ExPASy TrEMBL
Match: A0A1S4DUI1 (Phytosulfokine-beta OS=Cucumis melo OX=3656 GN=LOC107990603 PE=3 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.8e-29
Identity = 81/105 (77.14%), Postives = 87/105 (82.86%), Query Frame = 0


Query: 2   NQNSHG-----FFFFFFISFLFIFLLFSSHSASARFPPSKQGIEETHKKLSHG-MVQA-D 61
           N+NSHG     FFFFFFISFLFI LLFSSHSASARFPPSK GIEETHKK+S+G MVQ+ D
Sbjct: 81  NRNSHGFFFFFFFFFFFISFLFILLLFSSHSASARFPPSKHGIEETHKKISYGSMVQSGD 140

Query: 62  SWPDSPHIMGGRENGEEE-EEEEWEKRKMMLEAHLDYVYTQNEKP 99
           SWPD PH+   RE  EEE EEEE EKRKMMLEAHLDYVYTQ+E P
Sbjct: 141 SWPDFPHVK--REKDEEEVEEEEGEKRKMMLEAHLDYVYTQHENP 183

[Close]

BLAST of CaUC10G196850 vs. ExPASy TrEMBL
Match: A0A6J1KTY7 (Phytosulfokine-beta OS=Cucurbita maxima OX=3661 GN=LOC111498637 PE=3 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.8e-26
Identity = 72/98 (73.47%), Postives = 80/98 (81.63%), Query Frame = 0


Query: 1  MNQNSHGFFFFFFISFLFIFLLFSSHSASARFPPSKQGIEETHKKLSHGMVQADSWPDSP 60
          MNQ+SHGF  FF   + FIFLL  S SA+ARF P+KQG EETH KLSHGM+QADSWPD P
Sbjct: 1  MNQSSHGFSSFF---YFFIFLLL-SQSATARFLPTKQGFEETHNKLSHGMIQADSWPDFP 60

Query: 61 HIMGGRENGEEEEEEEWEKRKMMLEAHLDYVYTQNEKP 99
           I+  RE  EEEE+EEWEKR+MMLEAHLDYVYTQNEKP
Sbjct: 61 QII--RE--EEEEDEEWEKRRMMLEAHLDYVYTQNEKP 90

[Close]

BLAST of CaUC10G196850 vs. ExPASy TrEMBL
Match: A0A6J1FSF0 (Phytosulfokine-beta OS=Cucurbita moschata OX=3662 GN=LOC111447730 PE=3 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 1.0e-24
Identity = 65/98 (66.33%), Postives = 72/98 (73.47%), Query Frame = 0


Query: 1  MNQNSHGFFFFFFISFLFIFLLFSSHSASARFPPSKQGIEETHKKLSHGMVQADSWPDSP 60
          MNQ+SHG FF F         L  S SA+ARF P+KQG EETH KLSHGM+Q DSWPD P
Sbjct: 1  MNQSSHGLFFIF---------LLLSQSATARFLPTKQGFEETHNKLSHGMIQPDSWPDFP 60

Query: 61 HIMGGRENGEEEEEEEWEKRKMMLEAHLDYVYTQNEKP 99
           I+      EEEE+EEWEKR+MMLEAHLDYVYTQNEKP
Sbjct: 61 QII-----REEEEDEEWEKRRMMLEAHLDYVYTQNEKP 84

The following BLAST results are available for this feature:

BLAST of CaUC10G196850 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906014.1	1.9e-41	85.98	uncharacterized protein LOC120091917 [Benincasa hispida]	[more]
XP_022935155.1	2.4e-33	82.47	uncharacterized protein LOC111442110 [Cucurbita moschata]	[more]
KAG6580671.1	4.1e-33	83.16	hypothetical protein SDJN03_20673, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022983167.1	7.0e-33	81.44	uncharacterized protein LOC111481800 [Cucurbita maxima]	[more]
XP_023528216.1	1.6e-32	80.41	putative phytosulfokines 6 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CaUC10G196850 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CaUC10G196850 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F9T2	1.2e-33	82.47	Phytosulfokine-beta OS=Cucurbita moschata OX=3662 GN=LOC111442110 PE=3 SV=1	[more]
A0A6J1IYI6	3.4e-33	81.44	Phytosulfokine-beta OS=Cucurbita maxima OX=3661 GN=LOC111481800 PE=3 SV=1	[more]
A0A1S4DUI1	1.8e-29	77.14	Phytosulfokine-beta OS=Cucumis melo OX=3656 GN=LOC107990603 PE=3 SV=1	[more]
A0A6J1KTY7	1.8e-26	73.47	Phytosulfokine-beta OS=Cucurbita maxima OX=3661 GN=LOC111498637 PE=3 SV=1	[more]
A0A6J1FSF0	1.0e-24	66.33	Phytosulfokine-beta OS=Cucurbita moschata OX=3662 GN=LOC111447730 PE=3 SV=1	[more]

BLAST of CaUC10G196850 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009438	Phytosulfokine	PFAM	PF06404	PSK	coord: 19..97 e-value: 6.6E-12 score: 46.3
IPR009438	Phytosulfokine	PANTHER	PTHR33285	PHYTOSULFOKINES 3	coord: 11..98
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..78
None	No IPR available	PANTHER	PTHR33285:SF33	PHYTOSULFOKINES 6-RELATED	coord: 11..98

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC10G196850.1	CaUC10G196850.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030154	cell differentiation
biological_process	GO:0008283	cell population proliferation
biological_process	GO:0007165	signal transduction
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008083	growth factor activity