CaUC10G192330 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCAGAGAAATCATCTCTCCGCCACTCTCTCCGCCGTGTGATGGAGGCTGCCGAAGAGCAAGAAGCCGTTCTCTTCCACTCTTATCCATGTGCTTATTACGTACAAAGCCCCTCCACCCTCTCTCACGCCAACAGCTCCGACATCCGAAACCCCGCCGAGTCCTCCGCTTGCCACTCGCCCCTCCCCTCCGACACCTTCCCCAACGGCCACCACCACTGCAACCCGACCCAGGAAGCCTCTCGCTTCACCCTCTCCCACTACTCATCCTCCCGGGGCTCGAACCATGGGGCCGGGACCGACAATGGTGAGGCTCGTCTGATAGTCGGTTGCAGCAATGGTCGAGATTGCGATGAGGAGGAGGAGGAGGACGAGGACGGAGACGAGGAAGGGTATTATGGGAAGAAAAAAAGAGGTTGTTGGAAGAGGTATTTTACGTATAGGAATTCGGATTCTAATGCATGGATTTGCTTGCAGTTGAGTTGGAGAGCAATTTTCAGTATGGGAATTGCTTTGCTTGTGTTTTACATTGTCACTAACCCTCCCTCACCAATCATTTCTGTTAAGGTAATTTTGCTTTTTTTTTTTTTTTTCCTCCAAATTTTTTGTTTATATATATTTTCTTGAATTTTAATATTGGTATATATACAAATATAGAAATATTTAGGTATAGATAAATCTCGGTCGTATTTGGATCGTATGAGTGTATAATGTGACCATACTCGTACATATATATATACTATAGGAACTTTATATATATTACACTTGTTTGGTTGGATTTCATATATATATATACTATAGGAGGGTACTGACTTTTTCTTAAATACAAGGGACCGATAAATTATGTGGTTAAAATAAGTGCTAAATTAAAAAAAAAAAAAAAAAAAAAGTTCAACTATTAAAGACAAAATCATATATTTGGGTTTTTCTCACTTTTTTTTTTTTAATTTTAAAAAAACTATAATATATTATGCGTCGATGTGGAAATATGCACCTGCTCAAAACCATTTTTCTTTCTATTTCTCTTCTTAGTTTAAATTATTTTTTAGGTTAAATTTAAATTTTTTAATTTAGCTCTATTTCTCTTCTTAATTTTTAAATTTAAGCTCCATTTTAAATTTAATATCCATTTTTATAAAATACATTTTAGGTTTAGTCCTCCAATCCAACTAGATGTATCGTTTTTTTTTTGTTTTTTTTTGAATAAATAATAACAAGGAAAAATAAATATATAATAAACATCCATTCAAATAGTTTTATATCAAAAATAAAGATAACGTTATTTTGTCCCTTAAACCATATAAGACTATAACTATTTAACTAATCTTGCCCTTAAACTTTCAAACTTTTCCAAACATTCCTCATTCAATTTTTGAGGTTAAATTAATTTAAGTCTCAAAATTTTCAAAATTGAATGTTATTGAAAAAAAAAGAGGGATGGATGCAGGTGGGAGAAATAGAAGAGTTTATGCTAGGGGAAGGAGTGGACAAAACAGGGGTTGGAACTAAGATTCTAACATGCAATTGCACAATGAATGTAATTGTGGACAACCATTCTAAGCTTTTTGGCCTTCACATCCTTCCTCCATCTCTTCATATGTCTTTTGGGCCTCTCCCTATTGCCACTTCACAAGTAAGTCCTCATATTCTCTATTATTTGCTATAAACACTCTAAAATCAAAAATAGAAAAACTATAAAAAAAAAAATAATTATAAATATAGCAAAATTTTATTTTATATCTGCGATAGACCCAAATAGACATCTATCACTTTATCAGATTCACACGAATAGATGTCTATTTAGGTCTATCACAGATAGAAAGTAAAATTTTGCTATATTTGTAAATAGTTTGATATTTTTTCTATTTATAATAATTTTTCAAAAAAAAAATAATCATATTTAAACGATTGTTGCAACTAATTATTCGTGATAGTTATTGTTAGTCATTGTATTACACATCATGGTAAAAATATTAATGATACTTTTAAACAAATGTCATAATAAGCTTTTTGATGTCAATAATTTATTGTCGACAATAAATCATTACTTACAATTATAAAATGTTATTCTCTAGTGTTTTATTAGATTTTATGGCACTTTTTTTCCTCTTCTCCTTAATTTGGCTGGCTCTTGTGTCATGAAAAGTTATTTTTCATGTAGTGTAAACTCTTCTACTATATCTATACTATACATATTGGTATAATATAATGCAATTTCTTGGGAGTATATTGAAGAGCAAACCGAAGTGAGCTTCAATTAAAAGCCATATGAAGATATGATTGTTAGATAAATTTCTTATTCTATAATGTCTAAATTTTGGATTAAGTGCCATTTTAGAGCAATTTTTTTAGTTAATAGGAGAATGAATTAGATAAATTTCTCATTCTATAATGTCTAATTTTTGGATTAAGGTTCCATTTTCATTTTAGAGCAGTTTTAGAAAACGTTGGAACTATTTAAAAAATAAGGTTAATATTTTATCTTATCCACTTCCTTTTTTAGAGGAGACGGAAATAAACTCCATTTTACATTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAAATCAATTCCGCCTTTTAAGACGGAATTAAAGTTTTTTTTTTTTTTTGTTAAACCGATTTAGATTTTTTCTTTTAATTGTTTTCATTTATAAATTTTTGTTTTACATAATTTTTTTTAATCATACCTTAATTTGGGAGTTTTTTTTTCTCAATATTGCAAGTTTTAAAAATTATTAGAAGAGACGACATTTTTTTTCAAATTAAATTTTTTATTTTATTTTATTGTTTAGTAAAATATTCACTTTAAACCAATATTCATCTAAAATTTAGAATTTAGAATTTTATAAAATTATATTAGAAAAATTTTATATAAACTTTTACGGGTTGGAGTTGCATAATATACACAAGGGTTGAAATGGTTAAATCATTTTCGTTATTATCAAAAATTTTATTTTTTTTATTCTTTTAAAAAAAGTATTAAATTAAATGTGTGGGGTGAGAGAATCAAACCTTAAACTTCGAGGTTGATAGTATAAATATTATGTTAGTTGAGCTATACATTCATTTTGGCAAAAATTTTCATTTGAAACAAACGAAACTTTAGGCATCGAGTGTAATTCTAAAATAGTTAAAATCACTTTTGTTATTTTTAAAGTCACTCATAAAATACTTTTAATGATTCAAAATCAATTTTAATAATATAAAAAATGCATCTATAAATATAAAATTAATATTGAAATAAATTTGAATGATTAAAAAAAAGTATTTTGAAATAATTTTAACCACGACAAATGTGATTCTAACAATTTCAAAATTACTCCACTTTATTAGTTGAGCACATGTTATTGCTCAACCATAATCAATTTAATCCTATAATTAATGTGGGTTATTGAATTAATTAGGGTCCAAGAATGTATGCTGAGAGTGGAACGACGACGTTTCAATTAAGCGTGGGCATTAGCAATAAGCCAATGTACGGTGCGGGGAGGGACATGGAAGACAAGCTTGAATCAGGGATGGGATTGGAGCTTACAATTCGAGTCAATTTCATTTCAAATTATAGAGTAGTTTGGAAAATCATAAGGCCCCACTTTCATCGTCGTGTCGAATGCTTATTGGTCCTCGGAAAAGCCTATGATAGGAAGCGTCACACCCGATCCTTCAATAGTACTTGCCTAACTTCTCGATGATCATTGTGAACCAACAAATTTTGCTTTTTAATGATAAAAAAAA ATGTCAGAGAAATCATCTCTCCGCCACTCTCTCCGCCGTGTGATGGAGGCTGCCGAAGAGCAAGAAGCCGTTCTCTTCCACTCTTATCCATGTGCTTATTACGTACAAAGCCCCTCCACCCTCTCTCACGCCAACAGCTCCGACATCCGAAACCCCGCCGAGTCCTCCGCTTGCCACTCGCCCCTCCCCTCCGACACCTTCCCCAACGGCCACCACCACTGCAACCCGACCCAGGAAGCCTCTCGCTTCACCCTCTCCCACTACTCATCCTCCCGGGGCTCGAACCATGGGGCCGGGACCGACAATGGTGAGGCTCGTCTGATAGTCGGTTGCAGCAATGGTCGAGATTGCGATGAGGAGGAGGAGGAGGACGAGGACGGAGACGAGGAAGGGTATTATGGGAAGAAAAAAAGAGGTTGTTGGAAGAGGTATTTTACGTATAGGAATTCGGATTCTAATGCATGGATTTGCTTGCAGTTGAGTTGGAGAGCAATTTTCAGTATGGGAATTGCTTTGCTTGTGTTTTACATTGTCACTAACCCTCCCTCACCAATCATTTCTGTTAAGGTGGGAGAAATAGAAGAGTTTATGCTAGGGGAAGGAGTGGACAAAACAGGGGTTGGAACTAAGATTCTAACATGCAATTGCACAATGAATGTAATTGTGGACAACCATTCTAAGCTTTTTGGCCTTCACATCCTTCCTCCATCTCTTCATATGTCTTTTGGGCCTCTCCCTATTGCCACTTCACAAGGTCCAAGAATGTATGCTGAGAGTGGAACGACGACGTTTCAATTAAGCGTGGGCATTAGCAATAAGCCAATGTACGGTGCGGGGAGGGACATGGAAGACAAGCTTGAATCAGGGATGGGATTGGAGCTTACAATTCGAGTCAATTTCATTTCAAATTATAGAGTAGTTTGGAAAATCATAAGGCCCCACTTTCATCGTCGTGTCGAATGCTTATTGGTCCTCGGAAAAGCCTATGATAGGAAGCGTCACACCCGATCCTTCAATAGTACTTGCCTAACTTCTCGATGATCATTGTGAACCAACAAATTTTGCTTTTTAATGATAAAAAAAA ATGTCAGAGAAATCATCTCTCCGCCACTCTCTCCGCCGTGTGATGGAGGCTGCCGAAGAGCAAGAAGCCGTTCTCTTCCACTCTTATCCATGTGCTTATTACGTACAAAGCCCCTCCACCCTCTCTCACGCCAACAGCTCCGACATCCGAAACCCCGCCGAGTCCTCCGCTTGCCACTCGCCCCTCCCCTCCGACACCTTCCCCAACGGCCACCACCACTGCAACCCGACCCAGGAAGCCTCTCGCTTCACCCTCTCCCACTACTCATCCTCCCGGGGCTCGAACCATGGGGCCGGGACCGACAATGGTGAGGCTCGTCTGATAGTCGGTTGCAGCAATGGTCGAGATTGCGATGAGGAGGAGGAGGAGGACGAGGACGGAGACGAGGAAGGGTATTATGGGAAGAAAAAAAGAGGTTGTTGGAAGAGGTATTTTACGTATAGGAATTCGGATTCTAATGCATGGATTTGCTTGCAGTTGAGTTGGAGAGCAATTTTCAGTATGGGAATTGCTTTGCTTGTGTTTTACATTGTCACTAACCCTCCCTCACCAATCATTTCTGTTAAGGTGGGAGAAATAGAAGAGTTTATGCTAGGGGAAGGAGTGGACAAAACAGGGGTTGGAACTAAGATTCTAACATGCAATTGCACAATGAATGTAATTGTGGACAACCATTCTAAGCTTTTTGGCCTTCACATCCTTCCTCCATCTCTTCATATGTCTTTTGGGCCTCTCCCTATTGCCACTTCACAAGGTCCAAGAATGTATGCTGAGAGTGGAACGACGACGTTTCAATTAAGCGTGGGCATTAGCAATAAGCCAATGTACGGTGCGGGGAGGGACATGGAAGACAAGCTTGAATCAGGGATGGGATTGGAGCTTACAATTCGAGTCAATTTCATTTCAAATTATAGAGTAGTTTGGAAAATCATAAGGCCCCACTTTCATCGTCGTGTCGAATGCTTATTGGTCCTCGGAAAAGCCTATGATAGGAAGCGTCACACCCGATCCTTCAATAGTACTTGCCTAACTTCTCGATGA MSEKSSLRHSLRRVMEAAEEQEAVLFHSYPCAYYVQSPSTLSHANSSDIRNPAESSACHSPLPSDTFPNGHHHCNPTQEASRFTLSHYSSSRGSNHGAGTDNGEARLIVGCSNGRDCDEEEEEDEDGDEEGYYGKKKRGCWKRYFTYRNSDSNAWICLQLSWRAIFSMGIALLVFYIVTNPPSPIISVKVGEIEEFMLGEGVDKTGVGTKILTCNCTMNVIVDNHSKLFGLHILPPSLHMSFGPLPIATSQGPRMYAESGTTTFQLSVGISNKPMYGAGRDMEDKLESGMGLELTIRVNFISNYRVVWKIIRPHFHRRVECLLVLGKAYDRKRHTRSFNSTCLTSR Homology
BLAST of CaUC10G192330 vs. NCBI nr
Match: XP_038905771.1 (uncharacterized protein LOC120091726 [Benincasa hispida]) HSP 1 Score: 664.5 bits (1713), Expect = 5.1e-187 Identity = 329/349 (94.27%), Postives = 335/349 (95.99%), Query Frame = 0
BLAST of CaUC10G192330 vs. NCBI nr
Match: XP_008461795.2 (PREDICTED: uncharacterized protein LOC103500312 [Cucumis melo]) HSP 1 Score: 605.1 bits (1559), Expect = 3.7e-169 Identity = 302/348 (86.78%), Postives = 319/348 (91.67%), Query Frame = 0
BLAST of CaUC10G192330 vs. NCBI nr
Match: XP_004149613.1 (uncharacterized protein LOC101209149 [Cucumis sativus] >KGN58592.1 hypothetical protein Csa_002328 [Cucumis sativus]) HSP 1 Score: 600.9 bits (1548), Expect = 7.0e-168 Identity = 302/348 (86.78%), Postives = 317/348 (91.09%), Query Frame = 0
BLAST of CaUC10G192330 vs. NCBI nr
Match: XP_022934269.1 (uncharacterized protein LOC111441481 [Cucurbita moschata]) HSP 1 Score: 568.5 bits (1464), Expect = 3.8e-158 Identity = 280/335 (83.58%), Postives = 306/335 (91.34%), Query Frame = 0
BLAST of CaUC10G192330 vs. NCBI nr
Match: KAG7018082.1 (hypothetical protein SDJN02_19948, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 567.8 bits (1462), Expect = 6.5e-158 Identity = 281/337 (83.38%), Postives = 307/337 (91.10%), Query Frame = 0
BLAST of CaUC10G192330 vs. ExPASy TrEMBL
Match: A0A1S3CFE9 (uncharacterized protein LOC103500312 OS=Cucumis melo OX=3656 GN=LOC103500312 PE=4 SV=1) HSP 1 Score: 605.1 bits (1559), Expect = 1.8e-169 Identity = 302/348 (86.78%), Postives = 319/348 (91.67%), Query Frame = 0
BLAST of CaUC10G192330 vs. ExPASy TrEMBL
Match: A0A0A0LD21 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G696870 PE=4 SV=1) HSP 1 Score: 600.9 bits (1548), Expect = 3.4e-168 Identity = 302/348 (86.78%), Postives = 317/348 (91.09%), Query Frame = 0
BLAST of CaUC10G192330 vs. ExPASy TrEMBL
Match: A0A6J1F239 (uncharacterized protein LOC111441481 OS=Cucurbita moschata OX=3662 GN=LOC111441481 PE=4 SV=1) HSP 1 Score: 568.5 bits (1464), Expect = 1.9e-158 Identity = 280/335 (83.58%), Postives = 306/335 (91.34%), Query Frame = 0
BLAST of CaUC10G192330 vs. ExPASy TrEMBL
Match: A0A6J1DGR2 (uncharacterized protein LOC111020336 OS=Momordica charantia OX=3673 GN=LOC111020336 PE=4 SV=1) HSP 1 Score: 564.7 bits (1454), Expect = 2.7e-157 Identity = 288/333 (86.49%), Postives = 300/333 (90.09%), Query Frame = 0
BLAST of CaUC10G192330 vs. ExPASy TrEMBL
Match: A0A6J1J6W9 (uncharacterized protein LOC111481909 OS=Cucurbita maxima OX=3661 GN=LOC111481909 PE=4 SV=1) HSP 1 Score: 563.9 bits (1452), Expect = 4.6e-157 Identity = 279/335 (83.28%), Postives = 304/335 (90.75%), Query Frame = 0
BLAST of CaUC10G192330 vs. TAIR 10
Match: AT3G08490.1 (BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant protein, group 2 (TAIR:AT3G24600.1); Has 161 Blast hits to 158 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 161; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 208.8 bits (530), Expect = 7.2e-54 Identity = 103/195 (52.82%), Postives = 134/195 (68.72%), Query Frame = 0
BLAST of CaUC10G192330 vs. TAIR 10
Match: AT3G24600.1 (Late embryogenesis abundant protein, group 2 ) HSP 1 Score: 77.8 bits (190), Expect = 1.9e-14 Identity = 48/163 (29.45%), Postives = 82/163 (50.31%), Query Frame = 0
BLAST of CaUC10G192330 vs. TAIR 10
Match: AT5G42860.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G45688.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 66.6 bits (161), Expect = 4.4e-11 Identity = 78/316 (24.68%), Postives = 129/316 (40.82%), Query Frame = 0
BLAST of CaUC10G192330 vs. TAIR 10
Match: AT1G45688.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G42860.1); Has 258 Blast hits to 242 proteins in 39 species: Archae - 0; Bacteria - 11; Metazoa - 10; Fungi - 14; Plants - 198; Viruses - 17; Other Eukaryotes - 8 (source: NCBI BLink). ) HSP 1 Score: 62.8 bits (151), Expect = 6.4e-10 Identity = 78/318 (24.53%), Postives = 131/318 (41.19%), Query Frame = 0
BLAST of CaUC10G192330 vs. TAIR 10
Match: AT4G35170.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family ) HSP 1 Score: 53.5 bits (127), Expect = 3.9e-07 Identity = 61/268 (22.76%), Postives = 110/268 (41.04%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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