CaUC10G192290 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC10G192290
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Descriptionarabinogalactan peptide 23-like
LocationCiama_Chr10: 26810802 .. 26818141 (-)
RNA-Seq ExpressionCaUC10G192290
SyntenyCaUC10G192290
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTCGTTGGATGCAAAGCTAGAGGTACTTATAGGATCCTTGGAAACACTCACAAAATAAAGCTTACTTAACTAATGATTCCAACCAAAAGCTTAATTAGAAAAATTAATAAACCCTTAGATTGAACTTCAAACCTATTATTGTCACTCTTAAATCCTACGTCAACTCACTCTGTAATTAGCTTGATCAAAACTAATCTAATTAATTAATTTAAACAACAAATTTAAAGCAAGATTTGAAAGAAAAGACAACACCAAAGGGGTTGAATAAACACAAATTTTCTAATACTAATAATACGAGCTTTAAACAACATTACAATATATTTTAAAGACCAAAAGGTTGTGCATGAGACAAAAAAAACTCAAAAGTCATTCAAACATAATTAATTGCAAATTGTAGAAAATAAGACCTAGGAATTTAAAAACTTAATTGCATACTAATTAATAAGTCAAAATGCAAAACTAAAAGTGTAGAAAGTATTCAAATTGTCTTAAATAACTTCTCTAAAAGGTGGTAAACTTGATTTGTACTTTTGACATCACGATTTTTCATATTGTGCACACTTGACATCATTTTCTTCACAAAATGCACATTCTTTACCACCATGTGATCTCCCAAACTATAAGTTTTTATGTTCCATCTTCACTTCATTCTCTTTTGAACTCATTAGACTAACATTATATATAAAGTTTGACTCAAAATTATCTGTTTATTCTTGTAAATTTGCTAGCTTCTGAAGATATAGTGTGAATACCTCTTGAATCTCTTTTGCTTTGCTTATTGTAATTGCTCTTTCGAGTACATGCAATGCTCTAATATTGAATTCACATTAATACAAACTATTTATGAAATTTTATCAACCTATAGGGACCAAATTCTAATTTTTAAAACCATAAAGCATAGAAACTAAATTCTAACTTTCTTCGAATCATATGATCAAATTTGCAATGGCTCTAATATTGAATTCACATTAATACAGACTATTTATGAGATTTTATCAACTTATAAGGACCAAATTCTAATTTTTAAAACCATAAAGCATAGAAACTAAATTCTAACTTTTAATCATAGGATCAAATTTGCAACTAAAAAAGAAAAATTACCTTTTTAGTCCCCAAGTTTTGAACAACTTGTACGTTTGGTCCATGAATTTTAAAAAAGTACACTTTTAGTCTCCAAGTTTATAATAATATGTTTGTTTGATCTCTATGTTTTCATAATGTAACTTTTTAGTCTCTTAGTTTTTAAAAATAAGATTAAAAGGTCCCTCAAACAATTTTTTATTATTATTTTAAATAATCATATGCCATTTTAAATTAGAAAAATAATTTTTAAAAATCATCTCCTCTCTAAAACTATTTTTTTCTAATTTTAAATATTATATAATTATTTTTTAAAAATACAAAAAAATACTTAAAAGACTTTTTAAATCTATTTTAAAAAACTCAAGAACTGAAAATGTATATTTTGAAAACTCACAAACAAAATGGAGCTATTATAATAAACTTGGAACTAAAAATGGTTAATTTTTAAAATTGGACTAAATCACGTATTATCCAAAACTTTTGGACTAAAAAATGTAAGTTTATAAATAAAATTAAAATTGAGCGTCCAGAAAAATTTATCAGTGGAGCCCACCTAGCCGGTCTCTCTACCAGTCTTCCATTTCCATTTGCATCGACTCCATTCTCCAAACTTCCAGACCTCTTCCTCTCTCTCTCTCATCTCTTCATCTCTCCAAATTGTAGACAGAACCCCCAAAATCTACCGTCTTCAACCCTACAGCTTCGAAATCTTCCTCCAATCCTTCGTCTCTGTTAACGATGTTGCAGTTCTTCTTCACCGTGGCTTTCTCTGCAGTACCTTTGACTCTCTACATTCCCCCGCTCCGGAGCTTCAATCTCTTCGTCGAGACCATGGAGGAGATACTTCGGGAGTCAAGAACTTACACCAATCGGGTGTATCCTCGAGCTCGGCATGTTTGGTTAAGGGTTTTGGATTGTATTCTTTGCAGCAGCAGGTAGATGATTTTATTTTTCTTTTTCTTTCCAAGATTTCCAACTTCGAGACTCCCATCTATCTGTATATATTCTTTGATTTTCTCCTTTGTTCCATAAGATTTGCTTGAGTGTGATTCTGGTTGCCGATTCGGTTCTTGCGGGAGTCTGTTGTAAATTGCTGAATGTAACATGTTAGAGGATGTGTTCTCAGTTAATTTTAGAAAAATAAAGAGATGATGTTCATGTTAACATGTGTACTGTGATGTTCTGTTTCTTTCCTTCCATTCAATTTGAGGATTTCGCAATTTGTTTTTCTGAATCCTGGGAGTGAAATTGTTTCTCTGGTCCTGGCTTCTCACACTTGCTATAGCTAGTAATTTGATGTTAACTTGATTGATTTATAGTTGGTGAATTGATTGCAAGCCTAAAATGACAGCTCTAGATACATAATTTTAGATACATGTATTCCTATTCATTGTATTTGATAGGGTTGAAGAAGAGCATCATTTTCAAATGTATAATTGTGTGCGTAATGTCTTCATTCTAAGATTTTAGGCATCTGAATAATAGGGTTATTCGATGCTTGTGAGTGTAAGATTATGGTTTCTATTACATAGCAACTGCAGGATTGATTCTTATGAAGTTGATTGGGAATATCAGATTGTTGTGTTTCTTTTAGGCCCAGATTGGCTTTTGGTTTTTGAAAATGAAGCTTTACTACTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTCTTTTCTTTCCTTTTTTGTCTGTTTTTTAGAGGTGTTTTCAAAATGCCAAATTTTGATAACTAAAATGTAGTTTTTAAAAGTGTATTTTTTGCTTTTGGAATTTTACTGTGAATTCAAATATTCCTTAATAAAGATAAAAACTACCATAATGAAATGGTGGGAAGACAACACAATTTTCTAAAATCAAAATAGTTATTGAACGGGGTTGTAGTTTTTGTTTTAGTTTTCTTACCAAGCTTTAGGGTTGGAATTGGAAGAGGAAGACAACAAGAATTCTAAAACTTCTGAGTTTCCAGTTTGAACTAGGACTTTAGAGGGTATTTTCCGAACAACCCAAGCCTTTATTACTAAGATCTTTGTCACTAAAATGTAACAAAATCCATACTCCATTCCAATACTGCCTCTGTTAGTTTATTGTTGAATTATTCTATACATCATCAGCTCTTTACAACACAGTTTTCTTTTTCTTAAGTTCAACACTCGTAGAATGAAACTCAAACCATCAACCTTTGAGATGGTAATTGGTGTCTTATCTACCGAATTATGTTCAAATTGACCTTTACAACATAGACAGACCCTACAGGCTAATTATATCATACAAATTCATGTATGTTAGATAGAATTGCTTGTTTTGGTCTGTTGGAGGATCTCCTTAGAGTAGTAAAGTGCAAGTATATACATACATACATATATATATATATATATATATATCATTGTTATGAAAATGAAATTGGAAATTTGAGGAAGAATGAGGGTGTAGAAGATGATGAGAGTAATTTTTGATGCATGGTTGTCTAAGATGTTTGAACATCTTTATCTGATGCAAAAGGAGTATTACCATACACCTGCATATCCATCATATTTATGATACATGACTTCCTCAAAAGAAACCGTTGGCATATAACTAAGTCTTGTTTGATGGTTATTTGGTTTTTTGTTTTTAATTTTTGAAAATTAAGTTTCTGAGCACTATTTCTACCATTGTTTCTATATTTTTGTAATTTACTTTCTATTTATGTTTTGGGAAATCAAATTAAGTCTTGAAACTAACAAAAAAGAAAAACTAGAAATGCAAGTGTTCATTTAATGGAGGTGAAAACTATAATTGAGAAATTAGAAGTAAATAAGCATACATAGCAAAAATAGAAAATTGAAAACAAATTGGGACCAAAGACAATGTATGTTTTTAAAGTATTGGTCTATTGGATATGCTCAAGATTAAGATGAGTTCTTGTTTGCTAGCAAACATTGGGTGGTTACCCAGAATCTAGAACATTAGAAAACAAGGTGGTATAGCAATTGTTCTTGTGATTCAGGGAATTTTTGGCTCTTTGTTTTACTTTCAATGTATTAAGCTGATTGGAGTCTCGCAAGAATACAGCCAAAATATGTTGTTTATCCTGAAGAAGGTTACAATTTCATTACAAATTTGGTCACAATAATTCAAAAATTTTCAAATTAGTCACCCAACGCCAATATGCCTGAATTCCATTGTTCGGTCTCAAAAACTTTTGCATTTTATACCAGAGAGTTGAGGAGATTCAAATTACATGTCTTTTATTTGCTTAAATAGAAGTTTTTTTGTGAAATGTTTTTGTTTGTATGGTTGAAGTTTGGCTATTTCATAAGAACTAAATTGAAACTAATATAAATCATAAAGAAATGATTGAAAGTTTTAAAACGGTACGAATTAAGACAATATTCACTCCGGTGAAAACATAATAATCAATGGTAATATGAAAAATGGGCATTATTTGATTACCTTTGGTGTTTTGCATTCGTATTGTACTTACACATGGGGTCCATTTCAAAATTTTTAATAAAAAGATGCAAATTAATTGACGAGTGGAGAATGCTCAATCTAATTGCGTTTGAAAATTAAGTTGTTTCGTTACCATTATCGTTATTGGTACCATTGCTGCTGGTGTTTCAAAAGAAAAATTATGGATTTTGATATCTTTAATATTATCAAACTTATTACAATTGATTTAGCATTAAAATTCTAATACAAAAATTTCATTATTGTTTGATAAACGTGGCCTAAATTGGTATTAGAATCATTGATACCGAATTTGTAATTTATTTAATCAAATTAAAAAGCAAAAAGAAAGTAAAGGAAGGTGCTATGTTTTCTTTTCTCTCTTGGGTTCTCTAAGTAGGAATTTCGAACCTCTAACTTAAAATTATTTATATATTTTATGTCAATTGAATTATGTAGTAGATTAAACATTACTCTTACGCTCAAATAAAATCAAGACAAAAGATTGCTTCAGTAAATAATAATGATATTATTATTATTATTATGTTTAGAAGAACATAACTGCTCCAGCCAAGTAGATATATGTCCACCATGGGTCAATTAAGATTTGATAAGTTATTCATTATGGCATCATGGCCTCAAGAGCTTTGCCTCTATCCAATTCACACCTTCAAAAGAAAGTCATTGAACTGATTTTAGAGCTGGATTCCATATCAAGTGATGGTTTGTATTGTTGGTCACATTTTTCCATTGTTACATTCTTTTTTCTTTATTGGGAGTGTGCGGCTGTATAACTCTCGTATAATTGATCATACTACGTTTGGTTGTAAAAAAAGTTATTAAGATATTTAAGAGTTTGATTGGTAGAGAATTTGAAAATAGAAATTTGAAACACAATAGATTTAGTGAAAACATAAATGTATTTCTTGTTTTCATGTATGTGTTTGATGGCATATTTAGAAATTGAATTTTGATTTAAACCACCGTTTAGTTGTAATTACGTACTAAATATTAGTTTGATTATAAACTATTATTTATTGATTTATGATTTTTTTTTTTTTTAATTTTATACTTTAAAATACATTACATAACATATCTTACATTTAGAAAAAATCGATTGAGGTTGTAACATGAATACTATATTTTTAAACGTTCTTATTTTTATTTAATATAATTCTACCGTTTAAAATTTAAAGTCTAGATACACTAAAAATATAAAAATTTTGGATGATCTATCAGACACATATTTATTAAACTAGATAAATTAGAAAATATAAAACAAAATCTGAATTGCCAAAAAAAACATGCTCTAAAACTCTCTTACATAGTAGCCATACCTACACTGGCTTAGACTCATTCTTTCTAAGCCCTATATTCCATTATCATATTATACATCCAACGCTTGTTTGATCTACCTATTCAATTGAATATATGCATAATTGAACTCATTCATTAAATAAATATCTTGTTATATACACTGACTTCTAATATAGGTGCATACGAGCATATTAGAAAACTTCGTAGTACTAAAATTTTTCATACTACTTTTGTTCATTGTTGGTAAAAAATTGACATTTAAAAATTATGTGATATCTTTAGAATAATTTAATAAAGTAAAATTATGTTATATCTTTAGAATAAAGTAAAATTATCTTAAATGACAAAACTGCTGAAAATCTTAAATTTTATAAATATTTTTAACTAATCATTTAATGAGATGCAAATAATTAAATATTAATAAAAGAAAAACGGCTTATCACGGAATGATGCAAACAGAGAAAGAAACGATCAAATTCAAACAAATTCCCAAAATAGAAAAAAAAAAAAAAAAGCCCTAATTCCCAACCACGAATCGCAATCTTCAATTTCCCTCCAAACCAGGAACTTTCTTCTAAATATAGCTCTGCAAATTCAACAAGTTACCTTCCACCGAAAATCGCTCCAGTTTTCACCTATAAATCACATTCATCCCATCTCATTTTCCTCAGGCAGCAATTTCCAAAGCGAAGGCGTTTTTCGGTGATCTTTCTCGTTCGTTCCACTCAACGAATAAACGCCACCTAATTCCAAAAAAAAAAAACCTAAAAAATCGCAATGGAGATGAAGAAGATCGCCTGCGCCGTCCTCTTCGCTGCCGCAACCGTCAGCGCCGTCGTGGCTCACGATGAGGCGTTGGCTCCAGCACCTGGACCAAGCAGCGGCGCCGCCAGTGGTCTCCCGGCAATTGGCTCTCTCATCGGCGCCTCGTTGCTCTCCGTCGCCGCCTACTACTTGCAATGA

mRNA sequence

ATGCTCGTTGGATGCAAAGCTAGAGACAGAACCCCCAAAATCTACCGTCTTCAACCCTACAGCTTCGAAATCTTCCTCCAATCCTTCGTCTCTGTTAACGATGTTGCAGTTCTTCTTCACCGTGGCTTTCTCTGCAGTACCTTTGACTCTCTACATTCCCCCGCTCCGGAGCTTCAATCTCTTCGTCGAGACCATGGAGGAGATACTTCGGGAGTCAAGAACTTACACCAATCGGGTGTATCCTCGAGCTCGGCATGTTTGGTTAAGGGTTTTGGATTGTATTCTTTGCAGCAGCAGATTTGCTTGAGTGTGATTCTGGTTGCCGATTCGGTTCTTGCGGGAGTCTGTTGTAAATTGCTGAATAAGATCGCCTGCGCCGTCCTCTTCGCTGCCGCAACCGTCAGCGCCGTCGTGGCTCACGATGAGGCGTTGGCTCCAGCACCTGGACCAAGCAGCGGCGCCGCCAGTGGTCTCCCGGCAATTGGCTCTCTCATCGGCGCCTCGTTGCTCTCCGTCGCCGCCTACTACTTGCAATGA

Coding sequence (CDS)

ATGCTCGTTGGATGCAAAGCTAGAGACAGAACCCCCAAAATCTACCGTCTTCAACCCTACAGCTTCGAAATCTTCCTCCAATCCTTCGTCTCTGTTAACGATGTTGCAGTTCTTCTTCACCGTGGCTTTCTCTGCAGTACCTTTGACTCTCTACATTCCCCCGCTCCGGAGCTTCAATCTCTTCGTCGAGACCATGGAGGAGATACTTCGGGAGTCAAGAACTTACACCAATCGGGTGTATCCTCGAGCTCGGCATGTTTGGTTAAGGGTTTTGGATTGTATTCTTTGCAGCAGCAGATTTGCTTGAGTGTGATTCTGGTTGCCGATTCGGTTCTTGCGGGAGTCTGTTGTAAATTGCTGAATAAGATCGCCTGCGCCGTCCTCTTCGCTGCCGCAACCGTCAGCGCCGTCGTGGCTCACGATGAGGCGTTGGCTCCAGCACCTGGACCAAGCAGCGGCGCCGCCAGTGGTCTCCCGGCAATTGGCTCTCTCATCGGCGCCTCGTTGCTCTCCGTCGCCGCCTACTACTTGCAATGA

Protein sequence

MLVGCKARDRTPKIYRLQPYSFEIFLQSFVSVNDVAVLLHRGFLCSTFDSLHSPAPELQSLRRDHGGDTSGVKNLHQSGVSSSSACLVKGFGLYSLQQQICLSVILVADSVLAGVCCKLLNKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAASGLPAIGSLIGASLLSVAAYYLQ
Homology
[Close]
BLAST of CaUC10G192290 vs. NCBI nr
Match: XP_022983304.1 (arabinogalactan peptide 23-like [Cucurbita maxima])

HSP 1 Score: 97.4 bits (241), Expect = 1.3e-16
Identity = 55/59 (93.22%), Postives = 57/59 (96.61%), Query Frame = 0 

Query: 120 LNKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAASGLPAIGSLIGASLLSVAAYYLQ 179
           + KIACAVLFAAATVSAVVAHDEALAPAPGPSSGAA+GLPAIGS IGASLLSVAAYYLQ
Sbjct: 3   MKKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAAAGLPAIGSAIGASLLSVAAYYLQ 61

[Close]
BLAST of CaUC10G192290 vs. NCBI nr
Match: KAG7018086.1 (hypothetical protein SDJN02_19952, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 97.4 bits (241), Expect = 1.3e-16
Identity = 56/65 (86.15%), Postives = 60/65 (92.31%), Query Frame = 0 

Query: 114 GVCCKLLNKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAASGLPAIGSLIGASLLSVA 173
           G   + + KIACAVLFAAATVSAVVAHDEALAPAPGPSSGAA+GLPAIGS+IGASLLSVA
Sbjct: 42  GDSSRRMKKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAAAGLPAIGSVIGASLLSVA 101

Query: 174 AYYLQ 179
           AYYLQ
Sbjct: 102 AYYLQ 106

[Close]
BLAST of CaUC10G192290 vs. NCBI nr
Match: XP_038905644.1 (arabinogalactan protein 23-like [Benincasa hispida])

HSP 1 Score: 95.5 bits (236), Expect = 4.9e-16
Identity = 54/59 (91.53%), Postives = 56/59 (94.92%), Query Frame = 0 

Query: 120 LNKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAASGLPAIGSLIGASLLSVAAYYLQ 179
           + KIACAVLFAAATVSA VAHDEALAPAPGPSSGAA GLPAIGS+IGASLLSVAAYYLQ
Sbjct: 3   MKKIACAVLFAAATVSAAVAHDEALAPAPGPSSGAAIGLPAIGSVIGASLLSVAAYYLQ 61

[Close]
BLAST of CaUC10G192290 vs. NCBI nr
Match: XP_022998512.1 (arabinogalactan peptide 23-like [Cucurbita maxima])

HSP 1 Score: 94.0 bits (232), Expect = 1.4e-15
Identity = 52/59 (88.14%), Postives = 55/59 (93.22%), Query Frame = 0 

Query: 120 LNKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAASGLPAIGSLIGASLLSVAAYYLQ 179
           +NKI CA+LFAAATVSAVVAHDEA APAPGP+SGA  GLPAIGSLIGASLLSVAAYYLQ
Sbjct: 3   MNKITCAILFAAATVSAVVAHDEAAAPAPGPTSGATVGLPAIGSLIGASLLSVAAYYLQ 61

[Close]
BLAST of CaUC10G192290 vs. NCBI nr
Match: KAG7019275.1 (Arabinogalactan peptide 23, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 92.8 bits (229), Expect = 3.2e-15
Identity = 51/59 (86.44%), Postives = 55/59 (93.22%), Query Frame = 0 

Query: 120 LNKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAASGLPAIGSLIGASLLSVAAYYLQ 179
           + KI CA+LFAAATVSAVVAHDEA APAPGP+SGA +GLPAIGSLIGASLLSVAAYYLQ
Sbjct: 3   MKKITCAILFAAATVSAVVAHDEAAAPAPGPTSGATAGLPAIGSLIGASLLSVAAYYLQ 61

[Close]
BLAST of CaUC10G192290 vs. ExPASy Swiss-Prot
Match: Q8S2W4 (Arabinogalactan protein 23 OS=Arabidopsis thaliana OX=3702 GN=AGP23 PE=1 SV=2)

HSP 1 Score: 66.6 bits (161), Expect = 3.2e-10
Identity = 36/58 (62.07%), Postives = 50/58 (86.21%), Query Frame = 0 

Query: 120 LNKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAASGLPAIGSLIGASLLSVAAYYL 178
           + KIAC VLFAAA+++AV+A +E  APAPGP+S A++ LPA+GSL+GASL+S+ +YYL
Sbjct: 3   MKKIACGVLFAAASMTAVMAAEEVGAPAPGPASAASAALPALGSLVGASLVSLFSYYL 60

[Close]
BLAST of CaUC10G192290 vs. ExPASy TrEMBL
Match: A0A6J1J6Y9 (arabinogalactan peptide 23-like OS=Cucurbita maxima OX=3661 GN=LOC111481924 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 6.2e-17
Identity = 55/59 (93.22%), Postives = 57/59 (96.61%), Query Frame = 0 

Query: 120 LNKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAASGLPAIGSLIGASLLSVAAYYLQ 179
           + KIACAVLFAAATVSAVVAHDEALAPAPGPSSGAA+GLPAIGS IGASLLSVAAYYLQ
Sbjct: 3   MKKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAAAGLPAIGSAIGASLLSVAAYYLQ 61

[Close]
BLAST of CaUC10G192290 vs. ExPASy TrEMBL
Match: A0A6J1K873 (arabinogalactan peptide 23-like OS=Cucurbita maxima OX=3661 GN=LOC111493125 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 6.9e-16
Identity = 52/59 (88.14%), Postives = 55/59 (93.22%), Query Frame = 0 

Query: 120 LNKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAASGLPAIGSLIGASLLSVAAYYLQ 179
           +NKI CA+LFAAATVSAVVAHDEA APAPGP+SGA  GLPAIGSLIGASLLSVAAYYLQ
Sbjct: 3   MNKITCAILFAAATVSAVVAHDEAAAPAPGPTSGATVGLPAIGSLIGASLLSVAAYYLQ 61

[Close]
BLAST of CaUC10G192290 vs. ExPASy TrEMBL
Match: A0A5A7U280 (Arabinogalactan peptide 23 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold612G00270 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 8.4e-14
Identity = 49/58 (84.48%), Postives = 53/58 (91.38%), Query Frame = 0 

Query: 120 LNKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAASGLPAIGSLIGASLLSVAAYYL 178
           + KIACA+LFAAATVSA VA D+ALAPAPGPSSGAA GLPAIGSL+GASLLS AAYYL
Sbjct: 3   MKKIACAILFAAATVSAAVAEDKALAPAPGPSSGAAIGLPAIGSLVGASLLSFAAYYL 60

[Close]
BLAST of CaUC10G192290 vs. ExPASy TrEMBL
Match: A0A0A0L9U8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G697910 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 1.9e-13
Identity = 49/58 (84.48%), Postives = 53/58 (91.38%), Query Frame = 0 

Query: 120 LNKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAASGLPAIGSLIGASLLSVAAYYL 178
           + KIACAVLFAAATV+AVVA DEALAPAPGPSSGA  G+PAIGSL+GASLLS AAYYL
Sbjct: 3   MKKIACAVLFAAATVTAVVAADEALAPAPGPSSGAGIGVPAIGSLVGASLLSFAAYYL 60

[Close]
BLAST of CaUC10G192290 vs. ExPASy TrEMBL
Match: A0A6J1HQG2 (arabinogalactan peptide 23-like OS=Cucurbita maxima OX=3661 GN=LOC111465151 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 3.5e-12
Identity = 47/59 (79.66%), Postives = 51/59 (86.44%), Query Frame = 0 

Query: 120 LNKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAASGLPAIGSLIGASLLSVAAYYLQ 179
           + KI CAVLFAAATV+A VA +EA APAPGP+S A  GLPAIGSLIGASLLSVAAYYLQ
Sbjct: 3   MKKITCAVLFAAATVTAAVAQNEASAPAPGPTSAATVGLPAIGSLIGASLLSVAAYYLQ 61

[Close]
BLAST of CaUC10G192290 vs. TAIR 10
Match: AT3G57690.1 (arabinogalactan protein 23 )

HSP 1 Score: 66.6 bits (161), Expect = 2.3e-11
Identity = 36/58 (62.07%), Postives = 50/58 (86.21%), Query Frame = 0 

Query: 120 LNKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAASGLPAIGSLIGASLLSVAAYYL 178
           + KIAC VLFAAA+++AV+A +E  APAPGP+S A++ LPA+GSL+GASL+S+ +YYL
Sbjct: 3   MKKIACGVLFAAASMTAVMAAEEVGAPAPGPASAASAALPALGSLVGASLVSLFSYYL 60

[Close]
BLAST of CaUC10G192290 vs. TAIR 10
Match: AT2G41905.1 (BEST Arabidopsis thaliana protein match is: arabinogalactan protein 23 (TAIR:AT3G57690.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 56.2 bits (134), Expect = 3.1e-08
Identity = 36/59 (61.02%), Postives = 49/59 (83.05%), Query Frame = 0 

Query: 120 LNKIACAVLFAAATVSAVVAHDEALAPAPGP-SSGAASGLPAIGSLIGASLLSVAAYYL 178
           + KIAC V+FAAA+++AV+A  E  APAPGP +SGA+  +PA+GSL+GASL+S+ AYYL
Sbjct: 3   MKKIACGVVFAAASMTAVMA-AEVGAPAPGPAASGASVAVPALGSLVGASLVSLFAYYL 60

The following BLAST results are available for this feature:
BLAST of CaUC10G192290 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022983304.11.3e-1693.22arabinogalactan peptide 23-like [Cucurbita maxima][more]
KAG7018086.11.3e-1686.15hypothetical protein SDJN02_19952, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_038905644.14.9e-1691.53arabinogalactan protein 23-like [Benincasa hispida][more]
XP_022998512.11.4e-1588.14arabinogalactan peptide 23-like [Cucurbita maxima][more]
KAG7019275.13.2e-1586.44Arabinogalactan peptide 23, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
BLAST of CaUC10G192290 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8S2W43.2e-1062.07Arabinogalactan protein 23 OS=Arabidopsis thaliana OX=3702 GN=AGP23 PE=1 SV=2[more]
BLAST of CaUC10G192290 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1J6Y96.2e-1793.22arabinogalactan peptide 23-like OS=Cucurbita maxima OX=3661 GN=LOC111481924 PE=4... [more]
A0A6J1K8736.9e-1688.14arabinogalactan peptide 23-like OS=Cucurbita maxima OX=3661 GN=LOC111493125 PE=4... [more]
A0A5A7U2808.4e-1484.48Arabinogalactan peptide 23 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff... [more]
A0A0A0L9U81.9e-1384.48Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G697910 PE=4 SV=1[more]
A0A6J1HQG23.5e-1279.66arabinogalactan peptide 23-like OS=Cucurbita maxima OX=3661 GN=LOC111465151 PE=4... [more]
BLAST of CaUC10G192290 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G57690.12.3e-1162.07arabinogalactan protein 23 [more]
AT2G41905.13.1e-0861.02BEST Arabidopsis thaliana protein match is: arabinogalactan protein 23 (TAIR:AT3... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34672:SF2ARABINOGALACTAN PROTEIN 23coord: 120..178
IPR044702Arabinogalactan protein 23/40PANTHERPTHR34672POLLEN-SPECIFIC ARABINOGALACTA PROTEIN BAN102coord: 120..178

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC10G192290.1CaUC10G192290.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane