CaUC10G191520 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC10G191520
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
LocationCiama_Chr10: 25812734 .. 25817308 (-)
RNA-Seq ExpressionCaUC10G191520
SyntenyCaUC10G191520
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTACCTGAAAAAGGATAAGGAGACGCAAAGAAGTAATATGGCCCAAACTTGTCGGGAGGTTTGTAATTTTGACTGTGCAAATCAAAACCAATCCACTGAATGTCTTCCCTGTTGAAATACTTATCATTGGCTGGAAAAAGTGCAAGCTGTATCTGAAGATAATCATCAGCATTAAAGAAAGGGTTTCGAATAGAAGCCGTTCGGTTGAATTTTTCCAAAAGGCTCATTTCCAATAAGTGAAACAGAGTTATATTGGACAATTCCCGGAAAGAGGGTCCTCTAAAGTATAAAGTCCCTTCATATGGATAGGCACACTCACAACTCCGAGGGTTCAGCTTCTCATCAGAAGGACATGACTTACTGCCACAGTTGACAAGGCTGGTAGTATAAGGTTTTGCTTGTTGCTGTTGAAGCTGGCAATAGTTTGTATTTGAGAGGAAATTAGCATCACACACAGGATTTCCTGTCAGCCTAGACGTTATACTCATATGAATTAATAAAAGTAAGTCCAAGGGAAAACATGAAATCTAACATTGAAAAAATGGTGAGGATTTTTCTCACATCAAAGCGTTAGTATATCCCGAAGAGGTAACTGAGGAAATATTGTTATTTTGCAAATCGACTAGCTGCAACAGTTGGCCAATGCTGTCACCCATATATAATGTCCCACTAAATGCATTATTCTTCAGTTTTCTGTGGAAAAAAAAATGTAATTATTTATTGCAATTCAGAATTCAGCCTTAATGTTTAAAACAAAGCTTACACTTGTTGTATACGTGGTAAGCTAAAGATTCCTTCTGGCAGATTTCCCCGTATTGATCCATATTCAACAATACTGAAACCATGTTAATTAGCATAGACATTTACCATTAGATGTCAAAGATTTCAAAAACTTGACAAATAATATATTAGCATTGTTAGAGACCATATGCTAAGTTTAGTTTTATGGTGATGTAGAACTTACAGAGTGGTGAGAGATTGTAGATTTGAGAACCATTCCGGAGCTATTGATGAGCTAAATGAGTTGTTACTAAGATCCCTGTAAAGACAAACTTCAAGAGTTAGGTGAACTAGTACAATGAAGATCAAAATGGAAATGTTAGCTCCACGCCATGTGCTTACACGTAATTTAGTGAACTCATTTGAGTTAAGTTTGGTAGTGGACCTGTCAGCTTATTGTTGGCTAAATGCCTGAAAGAAGCACACAGTAGTAGGGATCAAAAAGGAAGTTGACTAATAACTACCCAAAAAGAGCAGTAGGAAACATTATGTAATTTTTGCATGGTGAGTACTCACAATTCATTCACATTTATTAGGTTGCTTAGAGTGGATGGGACACTTCCTGTTAAAGAATTTCGATCAAGTCGACTGTTACACATTTGAACAACTTCAGTAAGTTATAGTGAGAAAATTGCATAAGAAATAATATAGTACATTGAAGGCAAAGTAACTTATACTTACAGAACCTCAAGGGTCTTAACAAGTCCCAATGTTGGTGGGATACTCCCAGAAAAATTATTTCCATCAAATAATCTAATGAAAGAATTGTGTAAGGTATGAAACAGAATATGATTGGACAGAGTTGTTGGATTGATATTCACTTACATGTGTAATAATACCATCTCAGAGCGAAAAAGTTCAGGTGGAATGGTACCTGATAACTGGTTTTTGCTGAAATGACTGCAATTCACAAAGTCAAGCTTTAATTTTGACGTTCTTGGGGTGTAGAAACATCTGATGTTGTAGTTATATTTTCTTTCTTTTGCACAATTGATTCGATTGCGTGGACAAAATAATACTCACAAATGTTTAGCCTTAAAAAGTCGATCTAAACCCGAAGATCCGGAAGTGGAAACTGGGAGAGCACCAGTCAACTGATTATCTGCCAGGTCTAGCCAGTATAGATTGGAGAGTTTTCCCAGAGTTGCCGGTATAGTACCAGTGAAGTTGTTGGAATATAACGACCTGAGATAGATAAGAATTTTACTTGACAAACATTAAAGAAAGAAAGAAAGAACTAAAGAATATCTTTGTTTGCTTATCAATAAATTGAACTAAAGAATATCTTTGTTTGCTTATCAATAAATTCTATCTCACAAGAAGGTTAACTCAGTAAGATTGCCCAATTCTTCCGGAATATTGCCACTAAATCCACACGTCGAAAGGATCCTGTTGAAAATTGAAAATGCGAAAAACTATCTTAGCTGTAGAAAAACAAAAACATAAAAGGTAAATGGCATCAAATTTGATTGCTTATTAGCACTCTTTACAAGGTCTCTAATTTCAACAAACTCCCTAGAGCTGAAGAGATTGAACCAATGAGGTCTCGATTGGCTGCAAGGTCCCTGCAAACATTTAGAAACTCAAGGATCTCAGTGAACAAATATGAGACTGCTTGCTAATCTGGAACACAGAAAATTTTCTTGCAAGTATGGTCAGAATTCATGTTATTTCATATTGTAAAATGTTACATTACATGCTCCTATAAACTCAACCACAAAGAGATTGATGCAACTCACAATGATCTCAGTTCAGTAAGGCCTCCAATGTCACCACCAAGTTTACCTTTTAGGCCCATACTTGATAATTTCCTAAAGCGGTCAACACACGTAGTGAGTGAGTGATAAGGAGTAAAACTAAAGGGAAGAGAATTATTACTAAAGACAAATAATTGATATTTACAATGCAACTACTCTTGAGTTCTTGCAAATCACTCCTTCCCAGGGAGCTCCACATGGATCATTTGTTGTTCCCCAGCTTGGTGGTGTATTTTGCCATCCATCTTTCAAGGATTGAAGAACCGACGCTGCACCAACAACATGAGCATGAAGCTTACAAGGGTCGCATACACCCTCTTGACATTGACAAAGTTAAAGTGCAGTCAAAATCTACTTCATTGCTAACATTTATAGTTTCTAAACAATCATTGTAACAAACTTTAAAGTATAGAAACTAAAAAAATAAGTTCTAATCTAAACTCAAATATTTTGCTCTTAAATCGTCAATCAATCCAAAAGCTTAAACTAATGAGTTACAGTAAATTTAATAATATCAATACTTTAAATCTTCTTTTTACTTGTGGGCTTGATAATTTGTAGAAGGTTCAACGAGTTCAATATGAATTGGCAGAGAGATGACATTACAGAAGTTTCAAACACACACACTCCTACTCTAATACCAAGTAAAATCACAAAATCAATCCAAAATCTTAAAGCCCCGTTTGGTAACCATTTTGTTTTTTGTTTTTGGTTTTTGAAAATTAAGCCTATTTTCTTCACATCTCTTACAATGATTTGCATCTTTCTTAAGTACAATGGTTGGATTCTTAGTCAAATTCCAAATCAAAAACAAGTTTTTAAAAGCTACTTTTTTAGTTTTCAAAGTTTGGCTTGGTTTTCTAAAACCATTGACAAAAACTAGCAACAAAAGAAGAAATTTGGAGGTGGAAGTAATGTTTATAGGCTTAATTTATAAAAACAAAATGGTTACCAAACAGGGCCTAAGTAAATAGGTTAAGGTAAATTTAATTATATCAATATTGTTAATCTAGATGTATGTTAGTCTCTGAACTTTGAGAAGTTTAGATTTCATCTCTAAAAATTCTAATTTTGATTCCAACACATCTAACTGGTGGTAAGTTTTTTTTTTTTTAAGAAAATAAATGAATTTCACGAATGAAACAAAGGGAGCTAAATGTATTACAATAATACTCTCACATCTTTGTATTACAATAATACTCTCACATTGGAAATCAAAGAGGAAAGACTATAGTCAAAAAGAAAAACACCATCAGATGGTTTTTCCTTTTTTCCGAGTTCAACAATGTTGGGTGGGAGATCGAGCCATTATCGACCTATCAATTTTTGGGATAGTAATTGAAACTCATCAACTGAGTTGAGTTATGCTCAGATTGGCATAAGATTGTAAGTTAATTGAACTAAGTAATGATTCAATACCATGTGACACAAAGTAAGTGGAAACCAAACAAAATAAGGCAAGCCGGGGAGAAAATTTGATAGCATGGGCGAGTATATACATTTTAAACATTTTTTTTCATCCACCAAGAAGGAATGGTTTGATTGAAGAACTCAAGCAAATGAAAGCCTGCCTTTGTCTTCTTTGCAATGAAAGGCTTCATACTTGAAAGATGACAGGTTAAGCAAACAAAGAAACAAACAGCACATACAGGATAAGAAAGTAGGTTTAAAAGGTCAAGTAGAAACTTACAATCGTGGGAATCAGTATAGGAAGCCGCCAAGTAGAAGAAAGCCAAAAATAGCAGCGTTTGAACGACTGAAACCGCCAAAATCGCCCCCATATTTTCTCTCCCACCACGCACACAACTTGGTAACTCCCTTCTTCACTAAACCAATGATCGGAACAAAACGGGCAGTGCCCATTTCCCTTTGTCATTTTTGGTTGCATCTCTCTTGAATGCTGGTAGGTGGATGTAATTATCAGTCTTCGCTGATATTTTGATTCAGCAATTCAAAGCTCACAGTTGGATTTTAAGTTGGAGCTGCCCCACCAATGCATTGACTCAAAATCAGCATATACTATGGAAAAATCTTTTG

mRNA sequence

ATTACCTGAAAAAGGATAAGGAGACGCAAAGAAGTAATATGGCCCAAACTTGTCGGGAGGCACACTCACAACTCCGAGGGTTCAGCTTCTCATCAGAAGGACATGACTTACTGCCACAGTTGACAAGGCTGAATTCAGCCTTAATGTTTAAAACAAAGCTTACACTTGTTGTATACGTGATCAAAATGGAAATGTTAGCTCCACGCCATGTGCTTACACTCGATCTAAACCCGAAGATCCGGAAGTGGAAACTGGGAGAGCACCAGTCAACTGATTATCTGCCAGGTCTAGCCAGTATAGATTGGAGAGTTTTCCCAGAGTTGCCGGTCTCTAATTTCAACAAACTCCCTAGAGCTGAAGAGATTGAACCAATGAGGTCTCGATTGGCTGCAAGGTCCCTGCAAACATTTAGAAACTCAAGGATCTCAAAAATTTTCTTGCAAGTATGGTCAGAATTCATGTTATTTCATATTGTAAAATGTTACATTACATGCTCCTATAAACTCAACCACAAAGAGATTGATGCAACTCACAATGATCTCAGTTCAGTAAGGCCTCCAATGTCACCACCAAGTTTACCTTTTAGGCCCATACTTGATAATTTCCTAAAGCGGGAGCTCCACATGGATCATTTGTTGTTCCCCAGCTTGGTGGTGTATTTTGCCATCCATCTTTCAAGGATTGAAGAACCGACGCTGCACCAACAACATGAGCATGAAGCTTACAAGGGTCGCATACACCCTCTTGACATTGACAAAGTTAAAGTGCAGTCAAAATCTACTTCATTGCTAACATTTATAGCTTCATACTTGAAAGATGACAGGTTAAGCAAACAAAGAAACAAACAGCACATACAGGATAAGAAAGTAGGTTTAAAAGGTCAAGTAGAAACTTACAATCGTGGGAATCAGTATAGGAAGCCGCCAAGTAGAAGAAAGCCAAAAATAGCAGCGTTTGAACGACTGAAACCGCCAAAATCGCCCCCATATTTTCTCTCCCACCACGCACACAACTTGGTAACTCCCTTCTTCACTAAACCAATGATCGGAACAAAACGGGCACAATTCAAAGCTCACAGTTGGATTTTAAGTTGGAGCTGCCCCACCAATGCATTGACTCAAAATCAGCATATACTATGGAAAAATCTTTTG

Coding sequence (CDS)

ATGGCCCAAACTTGTCGGGAGGCACACTCACAACTCCGAGGGTTCAGCTTCTCATCAGAAGGACATGACTTACTGCCACAGTTGACAAGGCTGAATTCAGCCTTAATGTTTAAAACAAAGCTTACACTTGTTGTATACGTGATCAAAATGGAAATGTTAGCTCCACGCCATGTGCTTACACTCGATCTAAACCCGAAGATCCGGAAGTGGAAACTGGGAGAGCACCAGTCAACTGATTATCTGCCAGGTCTAGCCAGTATAGATTGGAGAGTTTTCCCAGAGTTGCCGGTCTCTAATTTCAACAAACTCCCTAGAGCTGAAGAGATTGAACCAATGAGGTCTCGATTGGCTGCAAGGTCCCTGCAAACATTTAGAAACTCAAGGATCTCAAAAATTTTCTTGCAAGTATGGTCAGAATTCATGTTATTTCATATTGTAAAATGTTACATTACATGCTCCTATAAACTCAACCACAAAGAGATTGATGCAACTCACAATGATCTCAGTTCAGTAAGGCCTCCAATGTCACCACCAAGTTTACCTTTTAGGCCCATACTTGATAATTTCCTAAAGCGGGAGCTCCACATGGATCATTTGTTGTTCCCCAGCTTGGTGGTGTATTTTGCCATCCATCTTTCAAGGATTGAAGAACCGACGCTGCACCAACAACATGAGCATGAAGCTTACAAGGGTCGCATACACCCTCTTGACATTGACAAAGTTAAAGTGCAGTCAAAATCTACTTCATTGCTAACATTTATAGCTTCATACTTGAAAGATGACAGGTTAAGCAAACAAAGAAACAAACAGCACATACAGGATAAGAAAGTAGGTTTAAAAGGTCAAGTAGAAACTTACAATCGTGGGAATCAGTATAGGAAGCCGCCAAGTAGAAGAAAGCCAAAAATAGCAGCGTTTGAACGACTGAAACCGCCAAAATCGCCCCCATATTTTCTCTCCCACCACGCACACAACTTGGTAACTCCCTTCTTCACTAAACCAATGATCGGAACAAAACGGGCACAATTCAAAGCTCACAGTTGGATTTTAAGTTGGAGCTGCCCCACCAATGCATTGACTCAAAATCAGCATATACTATGGAAAAATCTTTTG

Protein sequence

MAQTCREAHSQLRGFSFSSEGHDLLPQLTRLNSALMFKTKLTLVVYVIKMEMLAPRHVLTLDLNPKIRKWKLGEHQSTDYLPGLASIDWRVFPELPVSNFNKLPRAEEIEPMRSRLAARSLQTFRNSRISKIFLQVWSEFMLFHIVKCYITCSYKLNHKEIDATHNDLSSVRPPMSPPSLPFRPILDNFLKRELHMDHLLFPSLVVYFAIHLSRIEEPTLHQQHEHEAYKGRIHPLDIDKVKVQSKSTSLLTFIASYLKDDRLSKQRNKQHIQDKKVGLKGQVETYNRGNQYRKPPSRRKPKIAAFERLKPPKSPPYFLSHHAHNLVTPFFTKPMIGTKRAQFKAHSWILSWSCPTNALTQNQHILWKNLL
Homology
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BLAST of CaUC10G191520 vs. ExPASy TrEMBL
Match: A0A0A0LGT0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G059810 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 2.1e-27
Identity = 80/149 (53.69%), Postives = 96/149 (64.43%), Query Frame = 0 

Query: 98  SNFNKLPRAEEIEPMRSRLAARSLQTFRNSRISKIFLQVWSEFMLFHIVKCYITCSYKLN 157
           S  NK PRAEEIEPM S+LAARSLQ                   L H+          LN
Sbjct: 18  STTNKFPRAEEIEPMNSQLAARSLQ-------------------LKHLE------FTGLN 77

Query: 158 HKEIDATHNDLSSVRPPMSPPSLPFRPILD---NFLKRELHMDHLLFPSLVVYFAIHLSR 217
            + +    ++LSS RPPMSP SLPFRPILD       +EL+M+HL+FPSLV+YF+IHLSR
Sbjct: 78  EQRLMQLTDNLSSGRPPMSPLSLPFRPILDISKEVSTQELYMNHLMFPSLVMYFSIHLSR 137

Query: 218 IEEPTLHQQHEHEAYKGRIHPLDIDKVKV 244
           IEE   HQQH+H+AYKGRIHPLDI KV++
Sbjct: 138 IEELKQHQQHKHDAYKGRIHPLDIVKVQL 141

The following BLAST results are available for this feature:
BLAST of CaUC10G191520 vs.
Match NameE-valueIdentityDescription
BLAST of CaUC10G191520 vs.
Match NameE-valueIdentityDescription
BLAST of CaUC10G191520 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LGT02.1e-2753.69Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G059810 PE=4 SV=1[more]
BLAST of CaUC10G191520 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC10G191520.1CaUC10G191520.1mRNA