CaUC10G190710 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC10G190710
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
LocationCiama_Chr10: 24819586 .. 24820314 (+)
RNA-Seq ExpressionCaUC10G190710
SyntenyCaUC10G190710
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAATCGATTCCCCATTTTTAGCTTCACCATCTCTCTCTACGCTTCTCTGCCGTCGGAAGCGTGGTAGAGAGATAACGCATCGCTATCGTTTCGATTTTCGATTGGTTTCCATCCACCCGGCCTCATTTATCACAGGTAAGGATCCTATTTTCCCGAATTTCCTTTCTGGATTTGCAGATCTAGCGGTTTTCCTTTCATTTTTGCTGCTGCTTTCTTGGTTTAGGGTTGCGTTTTCTCTGGGGTTCTTGTTTGGGCTGTTTTATTTGTTCAGAATCTTTGAAAGAATGCATGAATTTATCTTGCATGTGCTGTTTTGTTGTTCACTCTTAACGGGTTCTGGAGAATTTTAGGTTTTGTATCCGTTTGCGTTCAGTTTCTTTTTCATTTTTCTAGAATTCGGCATATGCTGTAGGTTTTCTTGTGATTGGAGCTCTCTTTTCAAGGCTTCAAACTGTTTTTGCGCTTGGGGGAGGCTTCGAGACAGGTTGATTTTGTATCTTTTTGGTTATTTCGGCGTTTTTGTTCATGCATTAGTTCGGATTTTAAGGATAGAGATTTTTGGTGGGTTGAGCCTTTTCTATATTTTTCTAAGGTTTATGTTTATCTGCTTTAAATGGCCATCGAGAGAGAATAGATCCGGTTGTTCTGAACTGTTTTAAAAGATACTGGCTGATTTTGCGAACTTGATGGTTCCATCTCCTGGAAACCTAGTGATTATTGGTTAA

mRNA sequence

ATGGCAATCGATTCCCCATTTTTAGCTTCACCATCTCTCTCTACGCTTCTCTGCCGTCGGAAGCGTGGTAGAGAGATAACGCATCGCTATCGTTTCGATTTTCGATTGGTTTCCATCCACCCGGCCTCATTTATCACAGGTAAGGATCCTATTTTCCCGAATTTCCTTTCTGGATTTGCAGATCTAGCGGTTTTCCTTTCATTTTTGCTGCTGCTTTCTTGGTTTAGGGTTGCGTTTTCTCTGGGGTTTTCTTGTGATTGGAGCTCTCTTTTCAAGGCTTCAAACTGTTTTTGCGCTTGGGGGAGGCTTCGAGACAGGTTGATTTTGTATCTTTTTGGTTATTTCGGCGTTTTTGTTCATGCATTAGTTCGGATTTTAAGGATAGAGATACTGGCTGATTTTGCGAACTTGATGGTTCCATCTCCTGGAAACCTAGTGATTATTGGTTAA

Coding sequence (CDS)

ATGGCAATCGATTCCCCATTTTTAGCTTCACCATCTCTCTCTACGCTTCTCTGCCGTCGGAAGCGTGGTAGAGAGATAACGCATCGCTATCGTTTCGATTTTCGATTGGTTTCCATCCACCCGGCCTCATTTATCACAGGTAAGGATCCTATTTTCCCGAATTTCCTTTCTGGATTTGCAGATCTAGCGGTTTTCCTTTCATTTTTGCTGCTGCTTTCTTGGTTTAGGGTTGCGTTTTCTCTGGGGTTTTCTTGTGATTGGAGCTCTCTTTTCAAGGCTTCAAACTGTTTTTGCGCTTGGGGGAGGCTTCGAGACAGGTTGATTTTGTATCTTTTTGGTTATTTCGGCGTTTTTGTTCATGCATTAGTTCGGATTTTAAGGATAGAGATACTGGCTGATTTTGCGAACTTGATGGTTCCATCTCCTGGAAACCTAGTGATTATTGGTTAA

Protein sequence

MAIDSPFLASPSLSTLLCRRKRGREITHRYRFDFRLVSIHPASFITGKDPIFPNFLSGFADLAVFLSFLLLLSWFRVAFSLGFSCDWSSLFKASNCFCAWGRLRDRLILYLFGYFGVFVHALVRILRIEILADFANLMVPSPGNLVIIG
Homology
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BLAST of CaUC10G190710 vs. ExPASy TrEMBL
Match: A0A0A0LG68 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G838660 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 3.2e-06
Identity = 30/35 (85.71%), Postives = 30/35 (85.71%), Query Frame = 0 

Query: 4  DSPFLASPSLSTLLCRRKRGREITHRYRFDFRLVS 39
          DS F AS SLSTLLC RKRGREITHRYRF FRLVS
Sbjct: 9  DSSFFASSSLSTLLCLRKRGREITHRYRFHFRLVS 43

The following BLAST results are available for this feature:
BLAST of CaUC10G190710 vs.
Match NameE-valueIdentityDescription
BLAST of CaUC10G190710 vs.
Match NameE-valueIdentityDescription
BLAST of CaUC10G190710 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LG683.2e-0685.71Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G838660 PE=4 SV=1[more]
BLAST of CaUC10G190710 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC10G190710.1CaUC10G190710.1mRNA