CaUC10G190510 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC10G190510
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	photosystem I assembly factor PSA3, chloroplastic
Location	Ciama_Chr10: 24558082 .. 24560802 (+)
RNA-Seq Expression	CaUC10G190510
Synteny	CaUC10G190510

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGGATAACATATATAAACGAGAGGGTGAGAATAATACTTGAGAATCCCAACTCGGAGCCATGTCCGTGACCTCAACTTCCAGTACTTCATCTTCTCTCAACTCCAATCTCAAATCCTTCTTCCTTTCTAAGCCGATTTCGCCTTCTCGGCTCCTTCTCCGGCAAATTTATGGCCGCCGCCGGCAGTCGAATTCGGCCGGCGTGTTGTCCGTTAAGGCTTACATGGAGAATCCGAACTCTCTGTCCGGATTTGCGAATAAGGTGATCGGATCTCTGCCGGTGGTCGGACTGATCGCGAGGATTCTGAGCGATGAAGGCGGCGTCGGCAGCGACATTATAGATTTTGCGGAGTTTCGGAGACGAGTTGGGAAGAAATGTACGATTATGGAATCTAAAGCCTTCTATGAATTTCAAGAGAGAAAAGGCAAGGTAATGTGCCTCTTAATTTATGTATTTATTTTAAATTATACTTTATTTACTATTTTTAGTTTTTATAGTTAAAAAAATAAAAATAATAAAATCTCTAGTTTCGGTTTTTTTATTTTTATGTTTTTTAATTAGTCTGGGTGAATATTAAATTTCCGAAAGCATATTAAATAAGGATCTTTTCAAATATAGTAAAATCAAACAACTTATAAGTATAGTAAAATATTGGTGTCAATTAGTGATAGATAACAATGTCATTTGTTATATTTATAAATATTTTCAACAATTTTATCATTTGAAACAATTACATGTGCAAAATAACAATAAAATATCTACATTTTCAATGACATTAACTACCTTCTTTAGTCTTTGGTAATAAATCAATTTTGATAATAATCCTCCATATAGATTTTGACAGTAAACTTTTAATTTCATCAAATTAAATACAAGTTATAATTTTTATCCTAGTTTAATCATTGCTAGTTCGCCACCTAATTTTAACAAAAAAAAAAAAAAAATGTGTGAAACATCTTCATAAACTCATTAATTTCATTAAAATAAATTTGTGTACAAAAAGAAGTTTGATCAAGGCTATATTAACTATGAAATAACTTTACCAACATTCATAAATTTCAGCCCCAAAAAAAAAGACAAAGCTCAAGTGCCATTTTATCTAAATTTTTATCAGTTTTATATCGCAAGTATATTTTATATTTCATTGAATGCATGAGAGAACTTTTTTAACTATATTTGGAGCGAAAATTTATCAAAGAGTTAAAATTGAAACACTCTTAAATTCAAAGTTAATGTTCCAACAATCATCTAGATTTGAGGTGCAATTCGATAAAACCAAAAGTTAATGATTAAAATTGATATAACTTAATAAGTTTTTTCCTTACTCTTTTTAATTGGCCAACGTCCATAGTTACAACATTGACATAAAAAATTGGTTCATCGTGCCTTAAGAAAACACTGCAACAAATTGTAAGTGGTGTGAAGTCTTTATAATATACACGTATTTTAACTTAAAATGTTTATTTATTTAATTTAAATATCTTTTTAAGTTTAAAATTAATAGAAAAATTATTTTAAATGTCAAAACTATTGAAAATATTTACAAATAATAGCAAAATATCACAGTCTATAACTATCTGTGATAGACTACTATCTATGTCTATCATGACATAGATACACAGTAGTCAATCACGGTCTATCACAAATAGACAGTAAAATTTTGCTATATTTATAAATGTTTTAATTCATTTTGTTATATTTGAAAACAGCCCAAACTAATATTACTTATTTGAATAAAATTAAAAGTTTAGGGTAAAAATTGATCCAACCAGACAAATTCAGACAAAAAAAAAAAAAAAATGCAAATCATAATGTTTTGTTTGAAGTAGAATGTTTGGTTGTGGTAGGCAGGAGAGCCTTTGTATGTTCTATTGTGCTGTTGGCTGGCAGCTGTGGGAGCTGGCTTGCTTAAATCAGAGGAAATTTTGGAAGGAGTAGTAAGGCTAAGGATTTCCAATGACATTGAATTTGAAGAGGAAACTTTCCTTGCTATGATGAATGAGGCTAGAGAGGTTTGTTAATCATATATTTCCGGTTTTTGGTTCCTAAAACTTTATACTCTCCAAATTAGATTTAGTCACACATTCCTGCAAAAATGACTAGATTGGATGTGCTTACTAAACAATTGTTACTCTATGGATTTGACGTTGACCTATGTAGAAACGAGAAAAACTAAAAGTTGCTGTTCCAAACATTCCGATGGAGGTTCGAGTCGAGAAAGCACTTGACGCTATTTATGTTTGTTCATTTGGGAGAGACCCAATAGAGGAAGATGATGAGAAACTTCTTGTCATCATGTTGAGTGCAGTTTTTGCATCTGTTGGGCAAACTGAGATTCAAAGGATTGTGAAAGAGAAGGCAATTAGAATTGCTGAAGGCAAGGACATTGCCATTGTTCCTGAGCCACAGCCTTTGTCTAAAGAAGCTATTTTAGCTCAAATGAAGGACCTTCAATTCCTCCAAGAGAAAACTGAGACTTAAAGTCATATTCTAGTTTGTTTGTTACATTGAGCTCTGAAGTTTGTAAGAGTTGAATCTTCTGCTCCACAGTTCTCTTACTTTTGACAAACATTGGCTCTTAATTATGGTATCAATGTGAATCTTAGATTAGAGGAGCGAGTTTAATTGAAGTCCAATTAATATAGTCTGTTCATAACTCTAAAACGTTCTTCAATCAATCTATGTAATGTTGGACGTTATTTTGAGATAGACTTTATGTAGT

mRNA sequence

CGGATAACATATATAAACGAGAGGGTGAGAATAATACTTGAGAATCCCAACTCGGAGCCATGTCCGTGACCTCAACTTCCAGTACTTCATCTTCTCTCAACTCCAATCTCAAATCCTTCTTCCTTTCTAAGCCGATTTCGCCTTCTCGGCTCCTTCTCCGGCAAATTTATGGCCGCCGCCGGCAGTCGAATTCGGCCGGCGTGTTGTCCGTTAAGGCTTACATGGAGAATCCGAACTCTCTGTCCGGATTTGCGAATAAGGTGATCGGATCTCTGCCGGTGGTCGGACTGATCGCGAGGATTCTGAGCGATGAAGGCGGCGTCGGCAGCGACATTATAGATTTTGCGGAGTTTCGGAGACGAGTTGGGAAGAAATGTACGATTATGGAATCTAAAGCCTTCTATGAATTTCAAGAGAGAAAAGGCAAGGCAGGAGAGCCTTTGTATGTTCTATTGTGCTGTTGGCTGGCAGCTGTGGGAGCTGGCTTGCTTAAATCAGAGGAAATTTTGGAAGGAGTAGTAAGGCTAAGGATTTCCAATGACATTGAATTTGAAGAGGAAACTTTCCTTGCTATGATGAATGAGGCTAGAGAGAAACGAGAAAAACTAAAAGTTGCTGTTCCAAACATTCCGATGGAGGTTCGAGTCGAGAAAGCACTTGACGCTATTTATGTTTGTTCATTTGGGAGAGACCCAATAGAGGAAGATGATGAGAAACTTCTTGTCATCATGTTGAGTGCAGTTTTTGCATCTGTTGGGCAAACTGAGATTCAAAGGATTGTGAAAGAGAAGGCAATTAGAATTGCTGAAGGCAAGGACATTGCCATTGTTCCTGAGCCACAGCCTTTGTCTAAAGAAGCTATTTTAGCTCAAATGAAGGACCTTCAATTCCTCCAAGAGAAAACTGAGACTTAAAGTCATATTCTAGTTTGTTTGTTACATTGAGCTCTGAAGTTTGTAAGAGTTGAATCTTCTGCTCCACAGTTCTCTTACTTTTGACAAACATTGGCTCTTAATTATGGTATCAATGTGAATCTTAGATTAGAGGAGCGAGTTTAATTGAAGTCCAATTAATATAGTCTGTTCATAACTCTAAAACGTTCTTCAATCAATCTATGTAATGTTGGACGTTATTTTGAGATAGACTTTATGTAGT

Coding sequence (CDS)

ATGTCCGTGACCTCAACTTCCAGTACTTCATCTTCTCTCAACTCCAATCTCAAATCCTTCTTCCTTTCTAAGCCGATTTCGCCTTCTCGGCTCCTTCTCCGGCAAATTTATGGCCGCCGCCGGCAGTCGAATTCGGCCGGCGTGTTGTCCGTTAAGGCTTACATGGAGAATCCGAACTCTCTGTCCGGATTTGCGAATAAGGTGATCGGATCTCTGCCGGTGGTCGGACTGATCGCGAGGATTCTGAGCGATGAAGGCGGCGTCGGCAGCGACATTATAGATTTTGCGGAGTTTCGGAGACGAGTTGGGAAGAAATGTACGATTATGGAATCTAAAGCCTTCTATGAATTTCAAGAGAGAAAAGGCAAGGCAGGAGAGCCTTTGTATGTTCTATTGTGCTGTTGGCTGGCAGCTGTGGGAGCTGGCTTGCTTAAATCAGAGGAAATTTTGGAAGGAGTAGTAAGGCTAAGGATTTCCAATGACATTGAATTTGAAGAGGAAACTTTCCTTGCTATGATGAATGAGGCTAGAGAGAAACGAGAAAAACTAAAAGTTGCTGTTCCAAACATTCCGATGGAGGTTCGAGTCGAGAAAGCACTTGACGCTATTTATGTTTGTTCATTTGGGAGAGACCCAATAGAGGAAGATGATGAGAAACTTCTTGTCATCATGTTGAGTGCAGTTTTTGCATCTGTTGGGCAAACTGAGATTCAAAGGATTGTGAAAGAGAAGGCAATTAGAATTGCTGAAGGCAAGGACATTGCCATTGTTCCTGAGCCACAGCCTTTGTCTAAAGAAGCTATTTTAGCTCAAATGAAGGACCTTCAATTCCTCCAAGAGAAAACTGAGACTTAA

Protein sequence

MSVTSTSSTSSSLNSNLKSFFLSKPISPSRLLLRQIYGRRRQSNSAGVLSVKAYMENPNSLSGFANKVIGSLPVVGLIARILSDEGGVGSDIIDFAEFRRRVGKKCTIMESKAFYEFQERKGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVVRLRISNDIEFEEETFLAMMNEAREKREKLKVAVPNIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFASVGQTEIQRIVKEKAIRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQEKTET

Homology

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BLAST of CaUC10G190510 vs. NCBI nr
Match: XP_038905081.1 (photosystem I assembly factor PSA3, chloroplastic [Benincasa hispida])

HSP 1 Score: 522.3 bits (1344), Expect = 2.6e-144
Identity = 279/284 (98.24%), Postives = 281/284 (98.94%), Query Frame = 0


Query: 1   MSVTSTSSTSSSLNSNLKSFFLSKPISPSRLLLRQIYGRRRQSNSAGVLSVKAYMENPNS 60
           MSVTSTSSTSSSL+SNLKSFFLSKPISPSRL LRQIYGRRRQSNSAGVLSVKAYMENPNS
Sbjct: 1   MSVTSTSSTSSSLHSNLKSFFLSKPISPSRLFLRQIYGRRRQSNSAGVLSVKAYMENPNS 60

Query: 61  LSGFANKVIGSLPVVGLIARILSDEGGVGSDIIDFAEFRRRVGKKCTIMESKAFYEFQER 120
           LSGFANKVIGSLPVVGLIARILSDEGGVGSDIIDFAEFRRRVGKKCTIMESKAFYEFQER
Sbjct: 61  LSGFANKVIGSLPVVGLIARILSDEGGVGSDIIDFAEFRRRVGKKCTIMESKAFYEFQER 120

Query: 121 KGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVVRLRISNDIEFEEETFLAMMNEAREKR 180
           KGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGV RLRISNDIEFEEETFLAMMNEAREKR
Sbjct: 121 KGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETFLAMMNEAREKR 180

Query: 181 EKLKVAVPNIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFASVGQTEIQRI 240
           EKLKVAVPNIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFASV +TEIQRI
Sbjct: 181 EKLKVAVPNIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFASVRETEIQRI 240

Query: 241 VKEKAIRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQEKTET 285
           VKEKAIRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQEKTET
Sbjct: 241 VKEKAIRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQEKTET 284

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BLAST of CaUC10G190510 vs. NCBI nr
Match: XP_008443515.1 (PREDICTED: uncharacterized protein LOC103487086 [Cucumis melo] >KAA0053674.1 putative ubiquinone biosynthesis UbiB [Cucumis melo var. makuwa] >TYK14001.1 putative ubiquinone biosynthesis UbiB [Cucumis melo var. makuwa])

HSP 1 Score: 498.8 bits (1283), Expect = 3.1e-137
Identity = 263/284 (92.61%), Postives = 272/284 (95.77%), Query Frame = 0


Query: 1   MSVTSTSSTSSSLNSNLKSFFLSKPISPSRLLLRQIYGRRRQSNSAGVLSVKAYMENPNS 60
           MSVTSTS+TSSSL+SN KSFFLS PISPSRL L Q+YGRRR SNSAG  S+KAYMENPNS
Sbjct: 1   MSVTSTSTTSSSLHSNPKSFFLSNPISPSRLFLPQLYGRRRSSNSAGAFSIKAYMENPNS 60

Query: 61  LSGFANKVIGSLPVVGLIARILSDEGGVGSDIIDFAEFRRRVGKKCTIMESKAFYEFQER 120
           LSGFA+KVIGSLPVVGLIARI+SDEGGVGSD+IDFAEFRRRVGKKCTIMESKAFYEFQER
Sbjct: 61  LSGFASKVIGSLPVVGLIARIMSDEGGVGSDLIDFAEFRRRVGKKCTIMESKAFYEFQER 120

Query: 121 KGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVVRLRISNDIEFEEETFLAMMNEAREKR 180
           KGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGV RLRISNDIEFEEETF+AMMNEAREKR
Sbjct: 121 KGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETFIAMMNEAREKR 180

Query: 181 EKLKVAVPNIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFASVGQTEIQRI 240
           EKLK AVPNIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVF SVG+ EIQRI
Sbjct: 181 EKLKAAVPNIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEIQRI 240

Query: 241 VKEKAIRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQEKTET 285
           VKEKAIRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQEK ET
Sbjct: 241 VKEKAIRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQEKNET 284

[Close]

BLAST of CaUC10G190510 vs. NCBI nr
Match: XP_004141087.1 (photosystem I assembly factor PSA3, chloroplastic [Cucumis sativus] >KGN59665.1 hypothetical protein Csa_000816 [Cucumis sativus])

HSP 1 Score: 486.9 bits (1252), Expect = 1.2e-133
Identity = 257/284 (90.49%), Postives = 268/284 (94.37%), Query Frame = 0


Query: 1   MSVTSTSSTSSSLNSNLKSFFLSKPISPSRLLLRQIYGRRRQSNSAGVLSVKAYMENPNS 60
           MSVTSTS+TSSSL+SN K FFLS PISPS L LR++YGRRR  NSAG  S+KAYME+PNS
Sbjct: 1   MSVTSTSTTSSSLHSNPKFFFLSNPISPSPLFLRKLYGRRRNPNSAGAFSIKAYMESPNS 60

Query: 61  LSGFANKVIGSLPVVGLIARILSDEGGVGSDIIDFAEFRRRVGKKCTIMESKAFYEFQER 120
           LSGFA+KVIGSLPVVGLIARILSDEGGVG+DIIDFAEFRRRVGKKCTIMESKAFYEFQER
Sbjct: 61  LSGFASKVIGSLPVVGLIARILSDEGGVGTDIIDFAEFRRRVGKKCTIMESKAFYEFQER 120

Query: 121 KGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVVRLRISNDIEFEEETFLAMMNEAREKR 180
           KGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGV RLRISNDIEFEEETFLAMMNEAREKR
Sbjct: 121 KGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETFLAMMNEAREKR 180

Query: 181 EKLKVAVPNIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFASVGQTEIQRI 240
           EKLK AVPNIPMEVR+EKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVF SVG+ EIQRI
Sbjct: 181 EKLKAAVPNIPMEVRIEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEIQRI 240

Query: 241 VKEKAIRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQEKTET 285
           +KEKAIRIAEGKD AIVPEPQPLSKEAILAQMKDLQFLQE  ET
Sbjct: 241 LKEKAIRIAEGKDTAIVPEPQPLSKEAILAQMKDLQFLQENNET 284

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BLAST of CaUC10G190510 vs. NCBI nr
Match: KAG7022731.1 (hypothetical protein SDJN02_16466 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 464.2 bits (1193), Expect = 8.3e-127
Identity = 250/287 (87.11%), Postives = 267/287 (93.03%), Query Frame = 0


Query: 1   MSVTSTSSTSSSLNSNLKSFFLSKPISPSRLLLRQIY---GRRRQSNSAGVLSVKAYMEN 60
           M+VTST ST+SS +SN KSFFLS  ISP +LL RQ +   GRRR   S GVLSV+AYMEN
Sbjct: 1   MAVTST-STTSSFHSNPKSFFLSSLISPPKLLHRQFHGSVGRRRHPTSTGVLSVRAYMEN 60

Query: 61  PNSLSGFANKVIGSLPVVGLIARILSDEGGVGSDIIDFAEFRRRVGKKCTIMESKAFYEF 120
           PNSLSGFANKVIGSLPVVGLIARILSDEGGVGSDIIDFAEFRRRVGKKCTIM+SKAFY+F
Sbjct: 61  PNSLSGFANKVIGSLPVVGLIARILSDEGGVGSDIIDFAEFRRRVGKKCTIMDSKAFYDF 120

Query: 121 QERKGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVVRLRISNDIEFEEETFLAMMNEAR 180
           QER+GK GEPL+VLLCCWLAAVGAGLLKSEEILEGV RLRIS+DIEFEEETFLAMMNEAR
Sbjct: 121 QERRGKPGEPLFVLLCCWLAAVGAGLLKSEEILEGVARLRISDDIEFEEETFLAMMNEAR 180

Query: 181 EKREKLKVAVPNIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFASVGQTEI 240
           EKREKLKVAVP IPMEVRVEKALDAIYVCSFGRDPIEE+DEKLLVIMLS+VF +VGQ+EI
Sbjct: 181 EKREKLKVAVPKIPMEVRVEKALDAIYVCSFGRDPIEEEDEKLLVIMLSSVFPTVGQSEI 240

Query: 241 QRIVKEKAIRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQEKTET 285
           QRIVKEKA+RIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQE +ET
Sbjct: 241 QRIVKEKAVRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQENSET 286

[Close]

BLAST of CaUC10G190510 vs. NCBI nr
Match: KAG6588962.1 (Photosystem I assembly factor PSA3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 464.2 bits (1193), Expect = 8.3e-127
Identity = 250/287 (87.11%), Postives = 266/287 (92.68%), Query Frame = 0


Query: 1   MSVTSTSSTSSSLNSNLKSFFLSKPISPSRLLLRQIY---GRRRQSNSAGVLSVKAYMEN 60
           M+VTST ST+SS +SN KSFFLS  ISP + L RQ +   GRRR   S GVLSV+AYMEN
Sbjct: 1   MAVTST-STTSSFHSNPKSFFLSSLISPPKFLHRQFHGSVGRRRHPTSTGVLSVRAYMEN 60

Query: 61  PNSLSGFANKVIGSLPVVGLIARILSDEGGVGSDIIDFAEFRRRVGKKCTIMESKAFYEF 120
           PNSLSGFANKVIGSLPVVGLIARILSDEGGVGSDIIDFAEFRRRVGKKCTIM+SKAFY+F
Sbjct: 61  PNSLSGFANKVIGSLPVVGLIARILSDEGGVGSDIIDFAEFRRRVGKKCTIMDSKAFYDF 120

Query: 121 QERKGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVVRLRISNDIEFEEETFLAMMNEAR 180
           QER+GK GEPL+VLLCCWLAAVGAGLLKSEEILEGV RLRIS+DIEFEEETFLAMMNEAR
Sbjct: 121 QERRGKPGEPLFVLLCCWLAAVGAGLLKSEEILEGVARLRISDDIEFEEETFLAMMNEAR 180

Query: 181 EKREKLKVAVPNIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFASVGQTEI 240
           EKREKLKVAVP IPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLS+VF +VGQ+EI
Sbjct: 181 EKREKLKVAVPKIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSSVFPTVGQSEI 240

Query: 241 QRIVKEKAIRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQEKTET 285
           QRIVKEKA+RIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQE +ET
Sbjct: 241 QRIVKEKAVRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQENSET 286

[Close]

BLAST of CaUC10G190510 vs. ExPASy Swiss-Prot
Match: Q9M3C6 (Photosystem I assembly factor PSA3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSA3 PE=1 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 4.5e-83
Identity = 166/272 (61.03%), Postives = 208/272 (76.47%), Query Frame = 0


Query: 10  SSSLNSNLKSFFLSKPISPSRLLLRQIYGRRRQSNSAGVLSVKAYMENPNSLSGFANKVI 69
           S+S +    SFF  +  +PS          R + +    LS++AY+E PNS S FANKVI
Sbjct: 8   STSFHQISPSFFHLRLRNPS-----TTSSSRPKLDGGFALSIRAYIEKPNSFSTFANKVI 67

Query: 70  GSLPVVGLIARILSDEGGVGSDIIDFAEFRRRVGKKCTIMESKAFYEFQERKGKAGEPLY 129
           GSLPV+GL+ARI+SDEGGVG D++DFAEFR+RVG KCT  +S+AFYEFQ+R+GKAGEPLY
Sbjct: 68  GSLPVIGLLARIISDEGGVGRDLVDFAEFRKRVGNKCTPDDSRAFYEFQQRRGKAGEPLY 127

Query: 130 VLLCCWLAAVGAGLLKSEEILEGVVRLRISNDIEFEEETFLAMMNEAREKREKLKVAVPN 189
           VLLCCW+AAVGAGLLKSEEILEGV R+ ISND+EFEE+ F+A+M EAR++R KL +  P 
Sbjct: 128 VLLCCWVAAVGAGLLKSEEILEGVTRVSISNDLEFEEQNFIALMTEARQRRAKLNIDAPT 187

Query: 190 IPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFASVGQTEIQRIVKEKAIRIA 249
           IPME+RVEKAL+ IY C F R  IEE+DEKLL +ML AVF SV ++EI+RI+KEKA R+ 
Sbjct: 188 IPMELRVEKALEGIYACCFRRGLIEEEDEKLLKVMLIAVFPSVEKSEIERIIKEKATRVE 247

Query: 250 EGKDIAIVPEPQPLSKEAILAQMKDLQFLQEK 282
           EG +   V   + L KEAI  QMKDL+FLQ++
Sbjct: 248 EGGEEENVMAKR-LPKEAIQMQMKDLEFLQQQ 273

[Close]

BLAST of CaUC10G190510 vs. ExPASy Swiss-Prot
Match: B4FSG1 (Photosystem I assembly factor PSA3, chloroplastic OS=Zea mays OX=4577 GN=PSA3 PE=2 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 2.2e-77
Identity = 146/232 (62.93%), Postives = 186/232 (80.17%), Query Frame = 0


Query: 50  SVKAYME-NPNSLSGFANKVIGSLPVVGLIARILSDEGGVGSDIIDFAEFRRRVGKKCTI 109
           +V AYME NPNS +  A +++G+LP+VGL+ARIL+DEGGVG DIIDFAEFRRRV KKCT+
Sbjct: 35  AVVAYMEPNPNSPAAIAGRLVGALPIVGLVARILNDEGGVGGDIIDFAEFRRRVSKKCTV 94

Query: 110 MESKAFYEFQERKGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVVRLRISNDIEFEEET 169
           M+SKAFY+F +R+GK G+P YVLLCCWLAA+GAGLLK+EEILEGV RLRISNDIEFEEET
Sbjct: 95  MDSKAFYDFNQRRGKPGDPFYVLLCCWLAAIGAGLLKTEEILEGVARLRISNDIEFEEET 154

Query: 170 FLAMMNEAREKREKLKVAVPNIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAV 229
           F+ MM  A+EKR KLK   P IPME R EKAL+AIYVC FG+D +E++DEKLL  +L+AV
Sbjct: 155 FIDMMRAAKEKRAKLKAPAPQIPMETRAEKALEAIYVCCFGQDMVEDEDEKLLRAILNAV 214

Query: 230 FASVGQTEIQRIVKEKAIRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQE 281
           F SVG+  ++R+V   A ++A G+      + + +SKE    Q+KDL+FL++
Sbjct: 215 FPSVGRAAVERMVASMAKQVASGER---KRDGRTVSKEVQQRQLKDLEFLKQ 263

[Close]

BLAST of CaUC10G190510 vs. ExPASy TrEMBL
Match: A0A5D3CQC9 (Putative ubiquinone biosynthesis UbiB OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1119G00270 PE=4 SV=1)

HSP 1 Score: 498.8 bits (1283), Expect = 1.5e-137
Identity = 263/284 (92.61%), Postives = 272/284 (95.77%), Query Frame = 0


Query: 1   MSVTSTSSTSSSLNSNLKSFFLSKPISPSRLLLRQIYGRRRQSNSAGVLSVKAYMENPNS 60
           MSVTSTS+TSSSL+SN KSFFLS PISPSRL L Q+YGRRR SNSAG  S+KAYMENPNS
Sbjct: 1   MSVTSTSTTSSSLHSNPKSFFLSNPISPSRLFLPQLYGRRRSSNSAGAFSIKAYMENPNS 60

Query: 61  LSGFANKVIGSLPVVGLIARILSDEGGVGSDIIDFAEFRRRVGKKCTIMESKAFYEFQER 120
           LSGFA+KVIGSLPVVGLIARI+SDEGGVGSD+IDFAEFRRRVGKKCTIMESKAFYEFQER
Sbjct: 61  LSGFASKVIGSLPVVGLIARIMSDEGGVGSDLIDFAEFRRRVGKKCTIMESKAFYEFQER 120

Query: 121 KGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVVRLRISNDIEFEEETFLAMMNEAREKR 180
           KGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGV RLRISNDIEFEEETF+AMMNEAREKR
Sbjct: 121 KGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETFIAMMNEAREKR 180

Query: 181 EKLKVAVPNIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFASVGQTEIQRI 240
           EKLK AVPNIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVF SVG+ EIQRI
Sbjct: 181 EKLKAAVPNIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEIQRI 240

Query: 241 VKEKAIRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQEKTET 285
           VKEKAIRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQEK ET
Sbjct: 241 VKEKAIRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQEKNET 284

[Close]

BLAST of CaUC10G190510 vs. ExPASy TrEMBL
Match: A0A1S3B876 (uncharacterized protein LOC103487086 OS=Cucumis melo OX=3656 GN=LOC103487086 PE=4 SV=1)

HSP 1 Score: 498.8 bits (1283), Expect = 1.5e-137
Identity = 263/284 (92.61%), Postives = 272/284 (95.77%), Query Frame = 0


Query: 1   MSVTSTSSTSSSLNSNLKSFFLSKPISPSRLLLRQIYGRRRQSNSAGVLSVKAYMENPNS 60
           MSVTSTS+TSSSL+SN KSFFLS PISPSRL L Q+YGRRR SNSAG  S+KAYMENPNS
Sbjct: 1   MSVTSTSTTSSSLHSNPKSFFLSNPISPSRLFLPQLYGRRRSSNSAGAFSIKAYMENPNS 60

Query: 61  LSGFANKVIGSLPVVGLIARILSDEGGVGSDIIDFAEFRRRVGKKCTIMESKAFYEFQER 120
           LSGFA+KVIGSLPVVGLIARI+SDEGGVGSD+IDFAEFRRRVGKKCTIMESKAFYEFQER
Sbjct: 61  LSGFASKVIGSLPVVGLIARIMSDEGGVGSDLIDFAEFRRRVGKKCTIMESKAFYEFQER 120

Query: 121 KGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVVRLRISNDIEFEEETFLAMMNEAREKR 180
           KGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGV RLRISNDIEFEEETF+AMMNEAREKR
Sbjct: 121 KGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETFIAMMNEAREKR 180

Query: 181 EKLKVAVPNIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFASVGQTEIQRI 240
           EKLK AVPNIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVF SVG+ EIQRI
Sbjct: 181 EKLKAAVPNIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEIQRI 240

Query: 241 VKEKAIRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQEKTET 285
           VKEKAIRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQEK ET
Sbjct: 241 VKEKAIRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQEKNET 284

[Close]

BLAST of CaUC10G190510 vs. ExPASy TrEMBL
Match: A0A0A0LCC2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G836490 PE=4 SV=1)

HSP 1 Score: 486.9 bits (1252), Expect = 5.8e-134
Identity = 257/284 (90.49%), Postives = 268/284 (94.37%), Query Frame = 0


Query: 1   MSVTSTSSTSSSLNSNLKSFFLSKPISPSRLLLRQIYGRRRQSNSAGVLSVKAYMENPNS 60
           MSVTSTS+TSSSL+SN K FFLS PISPS L LR++YGRRR  NSAG  S+KAYME+PNS
Sbjct: 1   MSVTSTSTTSSSLHSNPKFFFLSNPISPSPLFLRKLYGRRRNPNSAGAFSIKAYMESPNS 60

Query: 61  LSGFANKVIGSLPVVGLIARILSDEGGVGSDIIDFAEFRRRVGKKCTIMESKAFYEFQER 120
           LSGFA+KVIGSLPVVGLIARILSDEGGVG+DIIDFAEFRRRVGKKCTIMESKAFYEFQER
Sbjct: 61  LSGFASKVIGSLPVVGLIARILSDEGGVGTDIIDFAEFRRRVGKKCTIMESKAFYEFQER 120

Query: 121 KGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVVRLRISNDIEFEEETFLAMMNEAREKR 180
           KGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGV RLRISNDIEFEEETFLAMMNEAREKR
Sbjct: 121 KGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETFLAMMNEAREKR 180

Query: 181 EKLKVAVPNIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFASVGQTEIQRI 240
           EKLK AVPNIPMEVR+EKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVF SVG+ EIQRI
Sbjct: 181 EKLKAAVPNIPMEVRIEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEIQRI 240

Query: 241 VKEKAIRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQEKTET 285
           +KEKAIRIAEGKD AIVPEPQPLSKEAILAQMKDLQFLQE  ET
Sbjct: 241 LKEKAIRIAEGKDTAIVPEPQPLSKEAILAQMKDLQFLQENNET 284

[Close]

BLAST of CaUC10G190510 vs. ExPASy TrEMBL
Match: A0A6J1EQR9 (photosystem I assembly factor PSA3, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111435039 PE=4 SV=1)

HSP 1 Score: 461.8 bits (1187), Expect = 2.0e-126
Identity = 249/287 (86.76%), Postives = 266/287 (92.68%), Query Frame = 0


Query: 1   MSVTSTSSTSSSLNSNLKSFFLSKPISPSRLLLRQIY---GRRRQSNSAGVLSVKAYMEN 60
           M+VTST ST+SS +SN KSFFL   ISP +LL RQ +   GRRR   S GVLSV+AYMEN
Sbjct: 1   MAVTST-STTSSFHSNPKSFFLYSLISPPKLLHRQFHGSVGRRRHPTSTGVLSVRAYMEN 60

Query: 61  PNSLSGFANKVIGSLPVVGLIARILSDEGGVGSDIIDFAEFRRRVGKKCTIMESKAFYEF 120
           PNSLSGFANKVIGSLPVVGLIARILSDEGGVGSDIIDFAEFRRRVGKKCTIM+SKAFY+F
Sbjct: 61  PNSLSGFANKVIGSLPVVGLIARILSDEGGVGSDIIDFAEFRRRVGKKCTIMDSKAFYDF 120

Query: 121 QERKGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVVRLRISNDIEFEEETFLAMMNEAR 180
           QER+GK GEPL+VLLCCWLAAVGAGLLKSEEILEGV RLRIS+DIEFEEETFLAMMNEAR
Sbjct: 121 QERRGKPGEPLFVLLCCWLAAVGAGLLKSEEILEGVARLRISDDIEFEEETFLAMMNEAR 180

Query: 181 EKREKLKVAVPNIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFASVGQTEI 240
           EKREKLKVAVP IPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLS+VF +VGQ+EI
Sbjct: 181 EKREKLKVAVPKIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSSVFPTVGQSEI 240

Query: 241 QRIVKEKAIRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQEKTET 285
           QRIVKEKA+RIAEGKDIAIVPEPQPLSKEAILAQMKDLQFL+E +ET
Sbjct: 241 QRIVKEKAVRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLRENSET 286

[Close]

BLAST of CaUC10G190510 vs. ExPASy TrEMBL
Match: A0A6J1JJA4 (photosystem I assembly factor PSA3, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111486319 PE=4 SV=1)

HSP 1 Score: 454.5 bits (1168), Expect = 3.2e-124
Identity = 246/287 (85.71%), Postives = 263/287 (91.64%), Query Frame = 0


Query: 1   MSVTSTSSTSSSLNSNLKSFFLSKPISPSRLLLRQIY---GRRRQSNSAGVLSVKAYMEN 60
           M+VTST ST+SS +SN KSFFLS  ISP +LL RQ +   GRRR   S GVLSV+AYMEN
Sbjct: 1   MAVTST-STTSSFHSNPKSFFLSSLISPPKLLHRQFHGSVGRRRHPTSTGVLSVRAYMEN 60

Query: 61  PNSLSGFANKVIGSLPVVGLIARILSDEGGVGSDIIDFAEFRRRVGKKCTIMESKAFYEF 120
           PNSLSGFANKVIGSLPVVGLIARILSDEGGVGSDIIDFAEFRRRVGKKCTIM+SKAFY+F
Sbjct: 61  PNSLSGFANKVIGSLPVVGLIARILSDEGGVGSDIIDFAEFRRRVGKKCTIMDSKAFYDF 120

Query: 121 QERKGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVVRLRISNDIEFEEETFLAMMNEAR 180
           QER+GK GEPL+VLLCCWLAAVGAGLLKSEEI EGV RLRIS+DIEFEEETFLAMMNEAR
Sbjct: 121 QERRGKPGEPLFVLLCCWLAAVGAGLLKSEEIFEGVARLRISDDIEFEEETFLAMMNEAR 180

Query: 181 EKREKLKVAVPNIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFASVGQTEI 240
           EKREKLKVAV  IPMEVRVEKALDAIYVCSFGRDPIEE DEKLLVIMLS+VF +VGQ+EI
Sbjct: 181 EKREKLKVAVSKIPMEVRVEKALDAIYVCSFGRDPIEEHDEKLLVIMLSSVFPTVGQSEI 240

Query: 241 QRIVKEKAIRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQEKTET 285
           QR+VKEKA+RIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQE + T
Sbjct: 241 QRMVKEKAVRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQENSGT 286

[Close]

BLAST of CaUC10G190510 vs. TAIR 10
Match: AT3G55250.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, chloroplast, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 46 Blast hits to 46 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 309.3 bits (791), Expect = 3.2e-84
Identity = 166/272 (61.03%), Postives = 208/272 (76.47%), Query Frame = 0


Query: 10  SSSLNSNLKSFFLSKPISPSRLLLRQIYGRRRQSNSAGVLSVKAYMENPNSLSGFANKVI 69
           S+S +    SFF  +  +PS          R + +    LS++AY+E PNS S FANKVI
Sbjct: 8   STSFHQISPSFFHLRLRNPS-----TTSSSRPKLDGGFALSIRAYIEKPNSFSTFANKVI 67

Query: 70  GSLPVVGLIARILSDEGGVGSDIIDFAEFRRRVGKKCTIMESKAFYEFQERKGKAGEPLY 129
           GSLPV+GL+ARI+SDEGGVG D++DFAEFR+RVG KCT  +S+AFYEFQ+R+GKAGEPLY
Sbjct: 68  GSLPVIGLLARIISDEGGVGRDLVDFAEFRKRVGNKCTPDDSRAFYEFQQRRGKAGEPLY 127

Query: 130 VLLCCWLAAVGAGLLKSEEILEGVVRLRISNDIEFEEETFLAMMNEAREKREKLKVAVPN 189
           VLLCCW+AAVGAGLLKSEEILEGV R+ ISND+EFEE+ F+A+M EAR++R KL +  P 
Sbjct: 128 VLLCCWVAAVGAGLLKSEEILEGVTRVSISNDLEFEEQNFIALMTEARQRRAKLNIDAPT 187

Query: 190 IPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFASVGQTEIQRIVKEKAIRIA 249
           IPME+RVEKAL+ IY C F R  IEE+DEKLL +ML AVF SV ++EI+RI+KEKA R+ 
Sbjct: 188 IPMELRVEKALEGIYACCFRRGLIEEEDEKLLKVMLIAVFPSVEKSEIERIIKEKATRVE 247

Query: 250 EGKDIAIVPEPQPLSKEAILAQMKDLQFLQEK 282
           EG +   V   + L KEAI  QMKDL+FLQ++
Sbjct: 248 EGGEEENVMAKR-LPKEAIQMQMKDLEFLQQQ 273

The following BLAST results are available for this feature:

BLAST of CaUC10G190510 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038905081.1	2.6e-144	98.24	photosystem I assembly factor PSA3, chloroplastic [Benincasa hispida]	[more]
XP_008443515.1	3.1e-137	92.61	PREDICTED: uncharacterized protein LOC103487086 [Cucumis melo] >KAA0053674.1 put...	[more]
XP_004141087.1	1.2e-133	90.49	photosystem I assembly factor PSA3, chloroplastic [Cucumis sativus] >KGN59665.1 ...	[more]
KAG7022731.1	8.3e-127	87.11	hypothetical protein SDJN02_16466 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6588962.1	8.3e-127	87.11	Photosystem I assembly factor PSA3, chloroplastic, partial [Cucurbita argyrosper...	[more]

BLAST of CaUC10G190510 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M3C6	4.5e-83	61.03	Photosystem I assembly factor PSA3, chloroplastic OS=Arabidopsis thaliana OX=370...	[more]
B4FSG1	2.2e-77	62.93	Photosystem I assembly factor PSA3, chloroplastic OS=Zea mays OX=4577 GN=PSA3 PE...	[more]

BLAST of CaUC10G190510 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CQC9	1.5e-137	92.61	Putative ubiquinone biosynthesis UbiB OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3B876	1.5e-137	92.61	uncharacterized protein LOC103487086 OS=Cucumis melo OX=3656 GN=LOC103487086 PE=...	[more]
A0A0A0LCC2	5.8e-134	90.49	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G836490 PE=4 SV=1	[more]
A0A6J1EQR9	2.0e-126	86.76	photosystem I assembly factor PSA3, chloroplastic OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1JJA4	3.2e-124	85.71	photosystem I assembly factor PSA3, chloroplastic OS=Cucurbita maxima OX=3661 GN...	[more]

BLAST of CaUC10G190510 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G55250.1	3.2e-84	61.03	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR037736	Photosystem I assembly factor PSA3	PANTHER	PTHR36770	PHOTOSYSTEM I ASSEMBLY FACTOR PSA3, CHLOROPLASTIC	coord: 22..283

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC10G190510.1	CaUC10G190510.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048564	photosystem I assembly
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0098572	stromal side of plastid thylakoid membrane