CaUC10G190460 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC10G190460
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionF-box domain-containing protein
LocationCiama_Chr10: 24519609 .. 24520394 (-)
RNA-Seq ExpressionCaUC10G190460
SyntenyCaUC10G190460
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGAATGAGTACGTGGAACTCCCAATTAATAATTCTACGATGCTTTACTCGGGCTACAGCTACGGATTTGGTTTTAGCTCCAACACAAAACACTACAAAATAGTTAAACTTTCTGTAATAAGAAATGGGTTATATGTAGTGGATATTTTTACAATTGGTTCATTTACCCGAAGTAGTTCTGGAAAATGGAGTAGGGTTCCGTTCATGCCGTTTTTTGTTTTTGGTTGTAAAGATGGTGTTTACTTGAATGGATATCTTTATTGGCATGGATACTACCGTAATATTAGAAACCGAGGTAGGGATATGGATATGGATATGGTTCTTTTACGTTTTGACGTAGAAGATGAGAAATTTCAACAAGTTTCTTTTCCCCCAAATGGGCAAGATGGAGCTTTTCATCCTTCTTCCCATATTTGGATCTTTAATAACAACCTCTATCTCTCTTGTTTGAACTTACATTTTAAGAGTGGTGAGTTCCATGTGTGGAAGATGGAGCAAGATTCGTGGTTTAAAGAATTTGTTATTCCACTGCCCATTGATTCAGTGCTGCATTATCCTATAAACTACTATGATGTGAGTACTTCATATCTCTTCCAACTCATCAAAGTTTTTGAAGATGGAAAGATGTTGTGTGTTGTTTCTAGCAAGGATTTAATTTTATACGACTCCAAGACCAAGCAGACAGAGGCGTTGAATGATAAGCTAAATCACCACGGAAGATTATGTATTCATGAAATTGATTCATTCAATTTTGGTTCTCTTCCAAAGACTTTGGGACTTTGA

mRNA sequence

ATGACGAATGAGTACGTGGAACTCCCAATTAATAATTCTACGATGCTTTACTCGGGCTACAGCTACGGATTTGGTTTTAGCTCCAACACAAAACACTACAAAATAGTTAAACTTTCTGTAATAAGAAATGGGTTATATGTAGTGGATATTTTTACAATTGGTTCATTTACCCGAAGTAGTTCTGGAAAATGGAGTAGGGTTCCGTTCATGCCGTTTTTTGTTTTTGGTTGTAAAGATGGTGTTTACTTGAATGGATATCTTTATTGGCATGGATACTACCGTAATATTAGAAACCGAGGTAGGGATATGGATATGGATATGGTTCTTTTACGTTTTGACGTAGAAGATGAGAAATTTCAACAAGTTTCTTTTCCCCCAAATGGGCAAGATGGAGCTTTTCATCCTTCTTCCCATATTTGGATCTTTAATAACAACCTCTATCTCTCTTGTTTGAACTTACATTTTAAGAGTGGTGAGTTCCATGTGTGGAAGATGGAGCAAGATTCGTGGTTTAAAGAATTTGTTATTCCACTGCCCATTGATTCAGTGCTGCATTATCCTATAAACTACTATGATGTGAGTACTTCATATCTCTTCCAACTCATCAAAGTTTTTGAAGATGGAAAGATGTTGTGTGTTGTTTCTAGCAAGGATTTAATTTTATACGACTCCAAGACCAAGCAGACAGAGGCGTTGAATGATAAGCTAAATCACCACGGAAGATTATGTATTCATGAAATTGATTCATTCAATTTTGGTTCTCTTCCAAAGACTTTGGGACTTTGA

Coding sequence (CDS)

ATGACGAATGAGTACGTGGAACTCCCAATTAATAATTCTACGATGCTTTACTCGGGCTACAGCTACGGATTTGGTTTTAGCTCCAACACAAAACACTACAAAATAGTTAAACTTTCTGTAATAAGAAATGGGTTATATGTAGTGGATATTTTTACAATTGGTTCATTTACCCGAAGTAGTTCTGGAAAATGGAGTAGGGTTCCGTTCATGCCGTTTTTTGTTTTTGGTTGTAAAGATGGTGTTTACTTGAATGGATATCTTTATTGGCATGGATACTACCGTAATATTAGAAACCGAGGTAGGGATATGGATATGGATATGGTTCTTTTACGTTTTGACGTAGAAGATGAGAAATTTCAACAAGTTTCTTTTCCCCCAAATGGGCAAGATGGAGCTTTTCATCCTTCTTCCCATATTTGGATCTTTAATAACAACCTCTATCTCTCTTGTTTGAACTTACATTTTAAGAGTGGTGAGTTCCATGTGTGGAAGATGGAGCAAGATTCGTGGTTTAAAGAATTTGTTATTCCACTGCCCATTGATTCAGTGCTGCATTATCCTATAAACTACTATGATGTGAGTACTTCATATCTCTTCCAACTCATCAAAGTTTTTGAAGATGGAAAGATGTTGTGTGTTGTTTCTAGCAAGGATTTAATTTTATACGACTCCAAGACCAAGCAGACAGAGGCGTTGAATGATAAGCTAAATCACCACGGAAGATTATGTATTCATGAAATTGATTCATTCAATTTTGGTTCTCTTCCAAAGACTTTGGGACTTTGA

Protein sequence

MTNEYVELPINNSTMLYSGYSYGFGFSSNTKHYKIVKLSVIRNGLYVVDIFTIGSFTRSSSGKWSRVPFMPFFVFGCKDGVYLNGYLYWHGYYRNIRNRGRDMDMDMVLLRFDVEDEKFQQVSFPPNGQDGAFHPSSHIWIFNNNLYLSCLNLHFKSGEFHVWKMEQDSWFKEFVIPLPIDSVLHYPINYYDVSTSYLFQLIKVFEDGKMLCVVSSKDLILYDSKTKQTEALNDKLNHHGRLCIHEIDSFNFGSLPKTLGL
Homology
BLAST of CaUC10G190460 vs. NCBI nr
Match: KGN59660.1 (hypothetical protein Csa_001105 [Cucumis sativus])

HSP 1 Score: 276.6 bits (706), Expect = 2.3e-70
Identity = 164/291 (56.36%), Postives = 198/291 (68.04%), Query Frame = 0

Query: 1   MTNEYVELPINNS--TMLYSGYSYGFGFSSNTKHYKIVKLSVIRNGLYVVDIFTIGSFTR 60
           +TNEYVELP+N++     Y+GYS+GFG+S N K YKIVKLS IR GLYV DIFTIG+FTR
Sbjct: 141 ITNEYVELPLNDAWKKTFYTGYSFGFGYSPNKKQYKIVKLSSIRRGLYVADIFTIGTFTR 200

Query: 61  SSSGKWSRVPFM-PFFVFGCKDGVYLNGYLYWHGY---YRNIRNRGRDMDMDMVLLRFDV 120
            S GKWSRVP +  F V G  DGVYLNG LYW+GY   Y ++RN G+     +VLLRFDV
Sbjct: 201 GSYGKWSRVPILIRFCVLGSGDGVYLNGSLYWNGYNGNYLDMRNGGK-----VVLLRFDV 260

Query: 121 EDEKFQQVSFPPNGQDGAFHPSSHIWIFNNNLYLSCLNLHFKS--GEFHVWKMEQD--SW 180
           EDEKF+ VSFP   +D  F  SS+IWIFNN LYLSC + +  +  G FHVWK+ ++  SW
Sbjct: 261 EDEKFEVVSFPHGVEDEVFRGSSNIWIFNNTLYLSCFDFNTNNGIGRFHVWKLMEEGYSW 320

Query: 181 FK---EFVIPLPID------SVLHY-----PINYYDVSTS---YLFQLIKVFEDGKMLCV 240
           FK   EFVI  PI       ++LHY        YYD S+S   Y FQLIKVFED KML +
Sbjct: 321 FKLEQEFVIRQPISNHWSTVALLHYIRYLKYRGYYDFSSSCTRYHFQLIKVFEDEKMLFL 380

Query: 241 VSSKDLILYDSKTKQTEALNDKLN--HHGRLCIHEID-SFNFGSLPKTLGL 262
           +S K LILYDSKT+Q E   + LN    G+L I++ID S N  SLPKTLG+
Sbjct: 381 ISRKALILYDSKTEQFEVTYNDLNQDQDGKLWIYDIDYSLNVDSLPKTLGV 426

BLAST of CaUC10G190460 vs. NCBI nr
Match: XP_011652871.1 (F-box/kelch-repeat protein At3g06240 [Cucumis sativus])

HSP 1 Score: 276.6 bits (706), Expect = 2.3e-70
Identity = 164/291 (56.36%), Postives = 198/291 (68.04%), Query Frame = 0

Query: 1   MTNEYVELPINNS--TMLYSGYSYGFGFSSNTKHYKIVKLSVIRNGLYVVDIFTIGSFTR 60
           +TNEYVELP+N++     Y+GYS+GFG+S N K YKIVKLS IR GLYV DIFTIG+FTR
Sbjct: 23  ITNEYVELPLNDAWKKTFYTGYSFGFGYSPNKKQYKIVKLSSIRRGLYVADIFTIGTFTR 82

Query: 61  SSSGKWSRVPFM-PFFVFGCKDGVYLNGYLYWHGY---YRNIRNRGRDMDMDMVLLRFDV 120
            S GKWSRVP +  F V G  DGVYLNG LYW+GY   Y ++RN G+     +VLLRFDV
Sbjct: 83  GSYGKWSRVPILIRFCVLGSGDGVYLNGSLYWNGYNGNYLDMRNGGK-----VVLLRFDV 142

Query: 121 EDEKFQQVSFPPNGQDGAFHPSSHIWIFNNNLYLSCLNLHFKS--GEFHVWKMEQD--SW 180
           EDEKF+ VSFP   +D  F  SS+IWIFNN LYLSC + +  +  G FHVWK+ ++  SW
Sbjct: 143 EDEKFEVVSFPHGVEDEVFRGSSNIWIFNNTLYLSCFDFNTNNGIGRFHVWKLMEEGYSW 202

Query: 181 FK---EFVIPLPID------SVLHY-----PINYYDVSTS---YLFQLIKVFEDGKMLCV 240
           FK   EFVI  PI       ++LHY        YYD S+S   Y FQLIKVFED KML +
Sbjct: 203 FKLEQEFVIRQPISNHWSTVALLHYIRYLKYRGYYDFSSSCTRYHFQLIKVFEDEKMLFL 262

Query: 241 VSSKDLILYDSKTKQTEALNDKLN--HHGRLCIHEID-SFNFGSLPKTLGL 262
           +S K LILYDSKT+Q E   + LN    G+L I++ID S N  SLPKTLG+
Sbjct: 263 ISRKALILYDSKTEQFEVTYNDLNQDQDGKLWIYDIDYSLNVDSLPKTLGV 308

BLAST of CaUC10G190460 vs. NCBI nr
Match: KGN59658.1 (hypothetical protein Csa_001357 [Cucumis sativus])

HSP 1 Score: 219.2 bits (557), Expect = 4.3e-53
Identity = 141/287 (49.13%), Postives = 168/287 (58.54%), Query Frame = 0

Query: 1   MTNEYVELPINNSTMLYSGYSYGFGFSSNTKHYKIVKLSVIR-------------NGLYV 60
           MTNE  EL +NNS   Y G S+GFG+S N K YKIVKLS+I+                YV
Sbjct: 138 MTNE--ELSLNNSLKFYPGSSFGFGYSPNKKQYKIVKLSLIKIPHLRSSYVASHLRSSYV 197

Query: 61  VDIFTIGSFTRSSSGKW--SRVPFMPFFVFGCKDGVYLNGYLYWHGYYRNIRNRGRDMDM 120
            +IFTIG F R   GKW  +RVP +         GVYLNG LYW  Y     N  R +  
Sbjct: 198 AEIFTIGKFARGRHGKWRQNRVPAVRVL---WSFGVYLNGSLYWKAY-----NTTR-IRA 257

Query: 121 DMVLLRFDVEDEKFQQVSFPPNGQDGAFHPSSHIWIFNNNLYLSCLNLHFKSGEFHVWKM 180
           + VLLRFDVEDEKF+ VSFP   +D AF  SS+IWIFNN LY+S  +     G FHVWKM
Sbjct: 258 NAVLLRFDVEDEKFEVVSFPQVVRDDAFLISSNIWIFNNTLYVSYFDSKIDMGSFHVWKM 317

Query: 181 --EQDSWFK---EFVIPLPIDSVLHYPINYYDVSTSYL----FQLIKVFEDGKMLCVVSS 240
             E  SW K   +F I   I    H+ +        Y+    FQLIKVFED  ML ++S 
Sbjct: 318 MEEDYSWVKLEQKFAIMKSIKD--HFSLMMVSYIRDYMIRCHFQLIKVFEDETMLFLISQ 377

Query: 241 KDLILYDSKTKQTEALNDKLN--HHGRLCIHEIDSFNFGSLPKTLGL 262
           + LILYDSK  Q EA++D+LN    G+LCIHEIDS NF SL KTLG+
Sbjct: 378 RALILYDSKIDQFEAVHDELNQDQDGKLCIHEIDSLNFDSLAKTLGV 411

BLAST of CaUC10G190460 vs. NCBI nr
Match: XP_038880514.1 (putative F-box protein At1g46984 [Benincasa hispida])

HSP 1 Score: 161.0 bits (406), Expect = 1.4e-35
Identity = 105/262 (40.08%), Postives = 151/262 (57.63%), Query Frame = 0

Query: 1   MTNEYVELP-INNSTMLYSGYSYGFGFSSNTKHYKIVKLSVIRNGLYVVDIFTIGSFTRS 60
           MTNEY +LP   +       Y YG GFS  TK YK+ +   + +  ++V+IF  G     
Sbjct: 139 MTNEYFKLPTFRSKGDSVKDYFYGLGFSPRTKQYKLARTHYVCHE-FIVEIFAFG----- 198

Query: 61  SSGKWSRVPFMPFFVFGCKDGVYLNGYLYWHGYYRNIRNRGRDMDMDMVLLRFDVEDEKF 120
           +S +W+ V  +P+F+     GVY NG LYW G  + + N G    +  V+ R D+ED+KF
Sbjct: 199 TSCEWTPVGSVPYFL-NEYHGVYFNGGLYWVG-GQQLPNAG----LSDVIYRLDLEDDKF 258

Query: 121 QQVSFPPNGQDGAFHPSSHIWIFNNNLYLSCLNLHFKSGEFHVWKMEQD-SWFKEFVIPL 180
           +Q+SFP +G D    P  +I ++N+ LYL+     F   E+HVWKME+D SW KEFV+ L
Sbjct: 259 KQISFPLDGDDEGDFP--YIGVYNDTLYLTLCCGDF---EYHVWKMEEDFSWIKEFVLAL 318

Query: 181 PIDSVLHYPINYYDVSTSYLFQLIKVFEDGKMLCVVSSKDLILYDSKTKQTEALNDK-LN 240
           P ++V H    ++ +   Y  QLIK  EDG +LC+ +   LILYD KT+ TE L D+   
Sbjct: 319 P-ENVHHSLPRHHPI--GYCLQLIKACEDGNILCLCAGLYLILYDPKTETTELLTDQDFE 378

Query: 241 HHGRLCIHEIDSFNFGSLPKTL 260
               + +++IDSFNF SL   L
Sbjct: 379 IKKHMWVYQIDSFNFNSLHNIL 380

BLAST of CaUC10G190460 vs. NCBI nr
Match: XP_004135796.1 (putative F-box protein At1g46984 [Cucumis sativus] >KGN66126.1 hypothetical protein Csa_007182 [Cucumis sativus])

HSP 1 Score: 149.8 bits (377), Expect = 3.2e-32
Identity = 102/265 (38.49%), Postives = 143/265 (53.96%), Query Frame = 0

Query: 1   MTNEYVELPINNST-MLYSGYSYGFGFSSNTKHYKIVKLSVIRNGLYVVDIFTIGSFTRS 60
           +TNEY +LP + S       Y YG GFS  T  YK+ +     +  ++VDIF  G     
Sbjct: 139 ITNEYFKLPTSRSKGDRVPNYCYGLGFSPTTNQYKLARTHFTHDE-FIVDIFAFG----- 198

Query: 61  SSGKWSRVPFMPFFVFGCKDGVYLNGYLYWHGYYRNIRNRGRDMDMDMVLLRFDVEDEKF 120
           +S +W+ V  +P F+     GVYLNG LYW G  +     G   D   V+ R D++DEKF
Sbjct: 199 TSCEWTPVGSVPNFL-NEYHGVYLNGGLYWVGSQK--LPNGGISDYTEVIYRLDLKDEKF 258

Query: 121 QQVSFPPNGQDGAFHPSSHIWIFNNNLYLSCLNLHFKSGEFHVWKMEQD-SWFKEFVIPL 180
           +++SFP +G D       +I ++N  LYL+     F   ++H WKME+D SW KEFV+ L
Sbjct: 259 EKISFPLDGGD-----DPYIAVYNGTLYLTFCCEDF---DYHAWKMEEDFSWSKEFVLAL 318

Query: 181 PID---SVLHYPINYYDVSTSYLFQLIKVFEDGKMLCVVSSKDLILYDSKTKQTEAL-ND 240
           P +   S+ H+PI YY        QLIK  EDG +LC+ +   LILYD  T+  E L N 
Sbjct: 319 PENVHHSLRHHPIGYY-------LQLIKFCEDGNILCLYAGILLILYDPSTQTVEILTNQ 378

Query: 241 KLNHHGRLCIHEIDSFNFGSLPKTL 260
                  + +H+I+SF+F SL   L
Sbjct: 379 DFEIKEAMWVHQIESFSFNSLHNIL 379

BLAST of CaUC10G190460 vs. ExPASy TrEMBL
Match: A0A0A0LCB8 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G836440 PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 1.1e-70
Identity = 164/291 (56.36%), Postives = 198/291 (68.04%), Query Frame = 0

Query: 1   MTNEYVELPINNS--TMLYSGYSYGFGFSSNTKHYKIVKLSVIRNGLYVVDIFTIGSFTR 60
           +TNEYVELP+N++     Y+GYS+GFG+S N K YKIVKLS IR GLYV DIFTIG+FTR
Sbjct: 141 ITNEYVELPLNDAWKKTFYTGYSFGFGYSPNKKQYKIVKLSSIRRGLYVADIFTIGTFTR 200

Query: 61  SSSGKWSRVPFM-PFFVFGCKDGVYLNGYLYWHGY---YRNIRNRGRDMDMDMVLLRFDV 120
            S GKWSRVP +  F V G  DGVYLNG LYW+GY   Y ++RN G+     +VLLRFDV
Sbjct: 201 GSYGKWSRVPILIRFCVLGSGDGVYLNGSLYWNGYNGNYLDMRNGGK-----VVLLRFDV 260

Query: 121 EDEKFQQVSFPPNGQDGAFHPSSHIWIFNNNLYLSCLNLHFKS--GEFHVWKMEQD--SW 180
           EDEKF+ VSFP   +D  F  SS+IWIFNN LYLSC + +  +  G FHVWK+ ++  SW
Sbjct: 261 EDEKFEVVSFPHGVEDEVFRGSSNIWIFNNTLYLSCFDFNTNNGIGRFHVWKLMEEGYSW 320

Query: 181 FK---EFVIPLPID------SVLHY-----PINYYDVSTS---YLFQLIKVFEDGKMLCV 240
           FK   EFVI  PI       ++LHY        YYD S+S   Y FQLIKVFED KML +
Sbjct: 321 FKLEQEFVIRQPISNHWSTVALLHYIRYLKYRGYYDFSSSCTRYHFQLIKVFEDEKMLFL 380

Query: 241 VSSKDLILYDSKTKQTEALNDKLN--HHGRLCIHEID-SFNFGSLPKTLGL 262
           +S K LILYDSKT+Q E   + LN    G+L I++ID S N  SLPKTLG+
Sbjct: 381 ISRKALILYDSKTEQFEVTYNDLNQDQDGKLWIYDIDYSLNVDSLPKTLGV 426

BLAST of CaUC10G190460 vs. ExPASy TrEMBL
Match: A0A0A0LCZ3 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G836430 PE=4 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 2.1e-53
Identity = 141/287 (49.13%), Postives = 168/287 (58.54%), Query Frame = 0

Query: 1   MTNEYVELPINNSTMLYSGYSYGFGFSSNTKHYKIVKLSVIR-------------NGLYV 60
           MTNE  EL +NNS   Y G S+GFG+S N K YKIVKLS+I+                YV
Sbjct: 138 MTNE--ELSLNNSLKFYPGSSFGFGYSPNKKQYKIVKLSLIKIPHLRSSYVASHLRSSYV 197

Query: 61  VDIFTIGSFTRSSSGKW--SRVPFMPFFVFGCKDGVYLNGYLYWHGYYRNIRNRGRDMDM 120
            +IFTIG F R   GKW  +RVP +         GVYLNG LYW  Y     N  R +  
Sbjct: 198 AEIFTIGKFARGRHGKWRQNRVPAVRVL---WSFGVYLNGSLYWKAY-----NTTR-IRA 257

Query: 121 DMVLLRFDVEDEKFQQVSFPPNGQDGAFHPSSHIWIFNNNLYLSCLNLHFKSGEFHVWKM 180
           + VLLRFDVEDEKF+ VSFP   +D AF  SS+IWIFNN LY+S  +     G FHVWKM
Sbjct: 258 NAVLLRFDVEDEKFEVVSFPQVVRDDAFLISSNIWIFNNTLYVSYFDSKIDMGSFHVWKM 317

Query: 181 --EQDSWFK---EFVIPLPIDSVLHYPINYYDVSTSYL----FQLIKVFEDGKMLCVVSS 240
             E  SW K   +F I   I    H+ +        Y+    FQLIKVFED  ML ++S 
Sbjct: 318 MEEDYSWVKLEQKFAIMKSIKD--HFSLMMVSYIRDYMIRCHFQLIKVFEDETMLFLISQ 377

Query: 241 KDLILYDSKTKQTEALNDKLN--HHGRLCIHEIDSFNFGSLPKTLGL 262
           + LILYDSK  Q EA++D+LN    G+LCIHEIDS NF SL KTLG+
Sbjct: 378 RALILYDSKIDQFEAVHDELNQDQDGKLCIHEIDSLNFDSLAKTLGV 411

BLAST of CaUC10G190460 vs. ExPASy TrEMBL
Match: A0A0A0M1M5 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G572960 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 1.6e-32
Identity = 102/265 (38.49%), Postives = 143/265 (53.96%), Query Frame = 0

Query: 1   MTNEYVELPINNST-MLYSGYSYGFGFSSNTKHYKIVKLSVIRNGLYVVDIFTIGSFTRS 60
           +TNEY +LP + S       Y YG GFS  T  YK+ +     +  ++VDIF  G     
Sbjct: 139 ITNEYFKLPTSRSKGDRVPNYCYGLGFSPTTNQYKLARTHFTHDE-FIVDIFAFG----- 198

Query: 61  SSGKWSRVPFMPFFVFGCKDGVYLNGYLYWHGYYRNIRNRGRDMDMDMVLLRFDVEDEKF 120
           +S +W+ V  +P F+     GVYLNG LYW G  +     G   D   V+ R D++DEKF
Sbjct: 199 TSCEWTPVGSVPNFL-NEYHGVYLNGGLYWVGSQK--LPNGGISDYTEVIYRLDLKDEKF 258

Query: 121 QQVSFPPNGQDGAFHPSSHIWIFNNNLYLSCLNLHFKSGEFHVWKMEQD-SWFKEFVIPL 180
           +++SFP +G D       +I ++N  LYL+     F   ++H WKME+D SW KEFV+ L
Sbjct: 259 EKISFPLDGGD-----DPYIAVYNGTLYLTFCCEDF---DYHAWKMEEDFSWSKEFVLAL 318

Query: 181 PID---SVLHYPINYYDVSTSYLFQLIKVFEDGKMLCVVSSKDLILYDSKTKQTEAL-ND 240
           P +   S+ H+PI YY        QLIK  EDG +LC+ +   LILYD  T+  E L N 
Sbjct: 319 PENVHHSLRHHPIGYY-------LQLIKFCEDGNILCLYAGILLILYDPSTQTVEILTNQ 378

Query: 241 KLNHHGRLCIHEIDSFNFGSLPKTL 260
                  + +H+I+SF+F SL   L
Sbjct: 379 DFEIKEAMWVHQIESFSFNSLHNIL 379

BLAST of CaUC10G190460 vs. ExPASy TrEMBL
Match: A0A5D3CIX9 (Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003440 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 1.3e-31
Identity = 98/267 (36.70%), Postives = 145/267 (54.31%), Query Frame = 0

Query: 1   MTNEYVELP-INNSTMLYSGYSYGFGFSSNTKHYKIVKLSVIRNGLYVVDIFTIGSFTRS 60
           +TNEY + P +         Y YG GFS  T  YK+ +     N  ++VDIF  G     
Sbjct: 138 ITNEYFKHPNLRLKGDKVPNYCYGLGFSPKTNQYKLARTHFAHNE-FIVDIFAFG----- 197

Query: 61  SSGKWSRVPFMPFFVFGCKDGVYLNGYLYWHGYYRNIRNRGRDMDMDMVLLRFDVEDEKF 120
           +S +W+ +  +P F+     GVY NG LYW G  + + N G   D   V+ R D+ DEKF
Sbjct: 198 TSCEWTPIGSVPNFL-NEYHGVYFNGGLYWVGSQKQLPNGGLS-DYTGVVYRLDLNDEKF 257

Query: 121 QQVSFPPNGQDGAFHPSSHIWIFNNNLYLSCLNLHFKSGEFHVWKMEQD-SWFKEFVIPL 180
           +++S P  G +       ++ ++N  LYL+   L  +  ++HVWKM++D SW KEFV+ L
Sbjct: 258 KKISIPFGGDE------PYVGVYNGTLYLT---LCCEDFDYHVWKMKEDFSWSKEFVLAL 317

Query: 181 PIDSVL-----HYPINYYDVSTSYLFQLIKVFEDGKMLCVVSSKDLILYDSKTKQTEALN 240
           P +++L     H+PI YY        QL+K  EDG +LC+ +   LI+YD KT+Q E L 
Sbjct: 318 P-ENILHSLHRHHPIGYY-------LQLVKFCEDGSILCLCAGILLIVYDPKTQQMEILT 377

Query: 241 DK-LNHHGRLCIHEIDSFNFGSLPKTL 260
           D+       +  H+I+SF+F SL  TL
Sbjct: 378 DQDFEIKEGMWFHQIESFSFNSLHNTL 379

BLAST of CaUC10G190460 vs. ExPASy TrEMBL
Match: A0A1S3BQV8 (putative F-box protein At3g21120 OS=Cucumis melo OX=3656 GN=LOC103492215 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 1.3e-31
Identity = 98/267 (36.70%), Postives = 145/267 (54.31%), Query Frame = 0

Query: 1   MTNEYVELP-INNSTMLYSGYSYGFGFSSNTKHYKIVKLSVIRNGLYVVDIFTIGSFTRS 60
           +TNEY + P +         Y YG GFS  T  YK+ +     N  ++VDIF  G     
Sbjct: 138 ITNEYFKHPNLRLKGDKVPNYCYGLGFSPKTNQYKLARTHFAHNE-FIVDIFAFG----- 197

Query: 61  SSGKWSRVPFMPFFVFGCKDGVYLNGYLYWHGYYRNIRNRGRDMDMDMVLLRFDVEDEKF 120
           +S +W+ +  +P F+     GVY NG LYW G  + + N G   D   V+ R D+ DEKF
Sbjct: 198 TSCEWTPIGSVPNFL-NEYHGVYFNGGLYWVGSQKQLPNGGLS-DYTGVVYRLDLNDEKF 257

Query: 121 QQVSFPPNGQDGAFHPSSHIWIFNNNLYLSCLNLHFKSGEFHVWKMEQD-SWFKEFVIPL 180
           +++S P  G +       ++ ++N  LYL+   L  +  ++HVWKM++D SW KEFV+ L
Sbjct: 258 KKISIPFGGDE------PYVGVYNGTLYLT---LCCEDFDYHVWKMKEDFSWSKEFVLAL 317

Query: 181 PIDSVL-----HYPINYYDVSTSYLFQLIKVFEDGKMLCVVSSKDLILYDSKTKQTEALN 240
           P +++L     H+PI YY        QL+K  EDG +LC+ +   LI+YD KT+Q E L 
Sbjct: 318 P-ENILHSLHRHHPIGYY-------LQLVKFCEDGSILCLCAGILLIVYDPKTQQMEILT 377

Query: 241 DK-LNHHGRLCIHEIDSFNFGSLPKTL 260
           D+       +  H+I+SF+F SL  TL
Sbjct: 378 DQDFEIKEGMWFHQIESFSFNSLHNTL 379

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN59660.12.3e-7056.36hypothetical protein Csa_001105 [Cucumis sativus][more]
XP_011652871.12.3e-7056.36F-box/kelch-repeat protein At3g06240 [Cucumis sativus][more]
KGN59658.14.3e-5349.13hypothetical protein Csa_001357 [Cucumis sativus][more]
XP_038880514.11.4e-3540.08putative F-box protein At1g46984 [Benincasa hispida][more]
XP_004135796.13.2e-3238.49putative F-box protein At1g46984 [Cucumis sativus] >KGN66126.1 hypothetical prot... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LCB81.1e-7056.36F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G836440 PE=4 ... [more]
A0A0A0LCZ32.1e-5349.13F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G836430 PE=4 ... [more]
A0A0A0M1M51.6e-3238.49F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G572960 PE=4 ... [more]
A0A5D3CIX91.3e-3136.70Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1... [more]
A0A1S3BQV81.3e-3136.70putative F-box protein At3g21120 OS=Cucumis melo OX=3656 GN=LOC103492215 PE=4 SV... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006527F-box associated domain, type 1PFAMPF07734FBA_1coord: 80..198
e-value: 4.0E-6
score: 26.8
IPR017451F-box associated interaction domainTIGRFAMTIGR01640TIGR01640coord: 2..186
e-value: 5.7E-16
score: 56.5
NoneNo IPR availablePANTHERPTHR47993:SF20F-BOX FAMILY PROTEINcoord: 1..198
NoneNo IPR availablePANTHERPTHR47993OS09G0372900 PROTEIN-RELATEDcoord: 1..198
IPR011043Galactose oxidase/kelch, beta-propellerSUPERFAMILY50965Galactose oxidase, central domaincoord: 43..241

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC10G190460.1CaUC10G190460.1mRNA