CaUC10G190150 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC10G190150
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Unknown protein
Location	Ciama_Chr10: 24172942 .. 24174607 (-)
RNA-Seq Expression	CaUC10G190150
Synteny	CaUC10G190150

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAGCTCTCCCCAGGCCGACGGCACAAGCAGGCAACCGGCGAGTTTTCCCGGCGATCTCCAACGGCAGCGCTGACGACGTATGCTTGTGCTAAATTCCTGGCATTGAATATTTGAATCCTCTTTAATTTGATTTCAAGATTATAATACGACAAACTATTCTTATTAACTTTGGAGAATTTAATTAGGTTTTCTAATTCGAAGTGACTTAATACTTTCTGAATTTCTCAGAGTTGGATCGAATTTTGTTTTACGATGTTTGATTTAATTTTAATTGTATGAATATAATTTTTATCAGATTGAATTTATTCATGATTTTCAAGTTGCGCCCCTCATGCCTGTATGATCACGAATACTCTTCTATGAAGTGCTATGAAGGGAGAAGACTTTACACTACTAACGGTTCACCAATTATCTGTTAATTGTCTAAGTTTTGGCTAAAGTTTTGTTTTATTTATTAGTTTGAACAGAGTTTTAATTTAAAAAGTGGAAGTTTATTTATATCCTTATGATTTTCAAGAGCTATTGGTAGGAAATTTAAGTTAAAAGATTTGGGTTGTTATAGTTGGTATGCATTAGAGACCAAGGCTATTGTTTATGTAGATTAGTTTACACAATAAGCTTTAATGGCCCCATTGGGCAGAGAAAAAAAACTTGTCGCTGGTATGATTCTTTTAATTAAGTATTTACTAATACTTTTGGTTGTTGTGTTGTGATGATTATCAATGTTTAATGTTTTATGTAATATTACGATGTAGTGTGATACTGTGATCTTTGAATTTTAATTATGGTTATTAGATTATGGCTCCCCAAAGAAAGGGCTGTACCACAAGACGTCGTAAGAATAGCAAGAACCAAGCGACTCCAAAATTAGTAGAGCCAACATTAAATCCACAGACTGACGAACAACTAATTGGAAAATCATCAAGACGGTCAAAGGCTCCTACACAAGATTCTGCAATGACTTTATTACAAGAGACTCTCCAAACACTTATTCAAACTATGGTTTCTAGTGTAGTGACTCAGATAAATCAAGATAGAGGAAGCATGTCAGAGGAAGCTAGATATTTTGGGGATTTCAAAACTTATGACCCTCGTTCTTTTGATGGGATATCCTTAGACCCGGCAATAGCGTTGAGCTGGTTGTCGTCTATAGAGACTATCTTCCACTACATGAAGTGTCCAGAGGAACAAAAGTTGCAATGTGCAGTTTTTATGTTGAAGGACGACGCTCTTCTCTGGTGGGAGTTTGTAGAAAGGTCCATTGATGTCACTGATGGGCCAGTTACCTGGATCCAATTTAAGGAAGCATTTTTGAAGAAGTATTATCCATCCACAACCCGATCTAGGAAAAAAAATGAATTCTTGAATCTCAAGCAGGGTAGTAGATCAATTGATGAATATGAAAGAGAATTTATAAGGTTGTCTCGCTTTGCTCCAGAACTAGTAGATACTGAAACTAAAAAGATTGAACGATTCATTATGGGTCTGAAGAATTGGGGTCTTGTAATGAGTTTTTCTCCTCTAAAATATGATGCAGCACGCCATGTAGCTGTATGTTTAGAGTTAGACAGTTGTGCATCAAGTGAGTCCCAAGAGCCTACAGAGAACGAGTTTTCCTCAAGACAAAAAAGGAAGCTCAACCACGGATCTCCTAAACTGCAGTAA

mRNA sequence

GAAGCTCTCCCCAGGCCGACGGCACAAGCAGGCAACCGGCGAGTTTTCCCGGCGATCTCCAACGGCAGCGCTGACGACATTATGGCTCCCCAAAGAAAGGGCTGTACCACAAGACGTCAGTTAGACAGTTGTGCATCAAGTGAGTCCCAAGAGCCTACAGAGAACGAGTTTTCCTCAAGACAAAAAAGGAAGCTCAACCACGGATCTCCTAAACTGCAGTAA

Coding sequence (CDS)

GAAGCTCTCCCCAGGCCGACGGCACAAGCAGGCAACCGGCGAGTTTTCCCGGCGATCTCCAACGGCAGCGCTGACGACATTATGGCTCCCCAAAGAAAGGGCTGTACCACAAGACGTCAGTTAGACAGTTGTGCATCAAGTGAGTCCCAAGAGCCTACAGAGAACGAGTTTTCCTCAAGACAAAAAAGGAAGCTCAACCACGGATCTCCTAAACTGCAGTAA

Protein sequence

EALPRPTAQAGNRRVFPAISNGSADDIMAPQRKGCTTRRQLDSCASSESQEPTENEFSSRQKRKLNHGSPKLQ

Homology

The following BLAST results are available for this feature:

BLAST of CaUC10G190150 vs.


Match Name	E-value	Identity	Description

BLAST of CaUC10G190150 vs.


Match Name	E-value	Identity	Description

BLAST of CaUC10G190150 vs.


Match Name	E-value	Identity	Description

BLAST of CaUC10G190150 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..54
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..73

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC10G190150.1	CaUC10G190150.1	mRNA