CaUC10G189580 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC10G189580
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	S-RNase
Location	Ciama_Chr10: 23461171 .. 23462371 (+)
RNA-Seq Expression	CaUC10G189580
Synteny	CaUC10G189580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCCACATGAACAGAAAGTTTTGTGTAAATGTACTTGTCAAAAGTGGGATTTTAAACCATGCCCTCTTAAGAAGACCAGAACTTGAGTCTGGCACCTTAAACCACTCGGCCATCTTGACACTTTTGTTTAAAAACCACATCATTTTTATATGGTAAACAAGTCATTTTTTTTACCAAGTTTTTTTTTTTTTGGTTGAGAGGACAATTGAAGATTCCACATTGGAAGAATGGAGAGTCTCACAGTCATTATACACTCTTTCCATTGCAAATAGATTTCGAGATGGAACCTGACAAAAAAGAAAAAGAAAAAACTCATATCCTTTATAAGATACATGGATTACTCTCTCTAGAACTAGTTGATTTTAAGATGAAATCAAATGTTTATTTAATACGTTTTAGGAAAGAATTTAACTAAAAACTCTCTTTAACCGTTTCACTTTAATTGAAAATTTTGGACTAAGTCGTCATAAGGGTGCTAAGGATGTATAAACTTAGTTAAAATATCGAAGTATGTGTAGTGATCCATCGACCTCTAATACTCTTTTTTTTTATAAATTAAAAAAAAAAAAAAAACTTTAGTTGAGAATGACTTTGGTTCATTTATCCAAAAATTATTTCTTGGTTTTATACAAAATTTATATAACTAAAAGTTGTTTTGATTAGCATACTCCAACATGGAATTAGTGAAATATGGCCAAATATTGTGACAGGAAACAATCTATGGTTATGGGGACACGAGTGGGATAAACATGGAACTTATAGGGAGACCATCTTATTCAACCAAGAACAATATTTCAGTTTAGCAATGGACACATACATTGAAAACAATCTATCGTTTATTCATGGTAGTAGCCAAATTACACCAAATGGCCAAGTTTATTCAAGCACTCAAGGTTATGCAGCAATAAGTGGAAAGACTGGAAAAACACCAGCCGTTCGATGCAACTACAACTATTGGAGTGGACTTCAACAATTACATGAAATAAGTCTTTGCTACAATTGGAATGCTACTGCTTTTGTGGACTGCCCTTTGAATGCCATAATAATTTTGTGTGGTATCCATGGAGCACTGCCAAGCCTTTATCTGCCAACCAACATAAATTGTAAAAAGGCCTCCTCTTGTTCGTATGGTGGCTCTTATATGTATGTGTGTACTTTAGTAAGCTTTTCTTCATCAGTTCATGAAGGAAATGAAATATGA

mRNA sequence

TTCCACATGAACAGAAAGTTTTGTGTAAATGTACTTGTCAAAAGTGGGATTTTAAACCATGCCCTCTTAAGAAGACCAGAACTTGAGTCTGGCACCTTAAACCACTCGGCCATCTTGACACTTTTCATACTCCAACATGGAATTAGTGAAATATGGCCAAATATTGTGACAGGAAACAATCTATGGTTATGGGGACACGAGTGGGATAAACATGGAACTTATAGGGAGACCATCTTATTCAACCAAGAACAATATTTCAGTTTAGCAATGGACACATACATTGAAAACAATCTATCGTTTATTCATGGTAGTAGCCAAATTACACCAAATGGCCAAGTTTATTCAAGCACTCAAGGTTATGCAGCAATAAGTGGAAAGACTGGAAAAACACCAGCCGTTCGATGCAACTACAACTATTGGAGTGGACTTCAACAATTACATGAAATAAGTCTTTGCTACAATTGGAATGCTACTGCTTTTGTGGACTGCCCTTTGAATGCCATAATAATTTTGTGTGGTATCCATGGAGCACTGCCAAGCCTTTATCTGCCAACCAACATAAATTGTAAAAAGGCCTCCTCTTGTTCGTATGGTGGCTCTTATATGTATGTGTGTACTTTAGTAAGCTTTTCTTCATCAGTTCATGAAGGAAATGAAATATGA

Coding sequence (CDS)

TTCCACATGAACAGAAAGTTTTGTGTAAATGTACTTGTCAAAAGTGGGATTTTAAACCATGCCCTCTTAAGAAGACCAGAACTTGAGTCTGGCACCTTAAACCACTCGGCCATCTTGACACTTTTCATACTCCAACATGGAATTAGTGAAATATGGCCAAATATTGTGACAGGAAACAATCTATGGTTATGGGGACACGAGTGGGATAAACATGGAACTTATAGGGAGACCATCTTATTCAACCAAGAACAATATTTCAGTTTAGCAATGGACACATACATTGAAAACAATCTATCGTTTATTCATGGTAGTAGCCAAATTACACCAAATGGCCAAGTTTATTCAAGCACTCAAGGTTATGCAGCAATAAGTGGAAAGACTGGAAAAACACCAGCCGTTCGATGCAACTACAACTATTGGAGTGGACTTCAACAATTACATGAAATAAGTCTTTGCTACAATTGGAATGCTACTGCTTTTGTGGACTGCCCTTTGAATGCCATAATAATTTTGTGTGGTATCCATGGAGCACTGCCAAGCCTTTATCTGCCAACCAACATAAATTGTAAAAAGGCCTCCTCTTGTTCGTATGGTGGCTCTTATATGTATGTGTGTACTTTAGTAAGCTTTTCTTCATCAGTTCATGAAGGAAATGAAATATGA

Protein sequence

FHMNRKFCVNVLVKSGILNHALLRRPELESGTLNHSAILTLFILQHGISEIWPNIVTGNNLWLWGHEWDKHGTYRETILFNQEQYFSLAMDTYIENNLSFIHGSSQITPNGQVYSSTQGYAAISGKTGKTPAVRCNYNYWSGLQQLHEISLCYNWNATAFVDCPLNAIIILCGIHGALPSLYLPTNINCKKASSCSYGGSYMYVCTLVSFSSSVHEGNEI

Homology

[Close]

BLAST of CaUC10G189580 vs. NCBI nr
Match: XP_038903744.1 (ribonuclease MC-like [Benincasa hispida])

HSP 1 Score: 228.8 bits (582), Expect = 4.6e-56
Identity = 107/147 (72.79%), Postives = 117/147 (79.59%), Query Frame = 0


Query: 26  PELESGTLNHS-----AILTLFILQHGISEIWPNIVTGNNLWLWGHEWDKHGTYRETILF 85
           P L SG   H       +  + ILQ GISEIWPN+VTG N WLWGHEWDKHGT  E+ILF
Sbjct: 65  PSLYSGAQTHCFGSPFDVNQISILQPGISEIWPNVVTGKNQWLWGHEWDKHGTCTESILF 124

Query: 86  NQEQYFSLAMDTYIENNLSFIHGSSQITPNGQVYSSTQGYAAISGKTGKTPAVRCNYNYW 145
           +QE+YFS  MD YIENNLSFI G SQITPNGQ+YS  Q YAAIS KTGKTPAVRCNYNYW
Sbjct: 125 DQEEYFSFTMDKYIENNLSFILGKSQITPNGQLYSRAQIYAAISAKTGKTPAVRCNYNYW 184

Query: 146 SGLQQLHEISLCYNWNATAFVDCPLNA 168
           SG++QLHEI+LCYNWNATAF DCPLNA
Sbjct: 185 SGVEQLHEITLCYNWNATAFEDCPLNA 211

[Close]

BLAST of CaUC10G189580 vs. NCBI nr
Match: AEM42996.1 (S-RNase [Siraitia grosvenorii])

HSP 1 Score: 206.1 bits (523), Expect = 3.2e-49
Identity = 93/125 (74.40%), Postives = 106/125 (84.80%), Query Frame = 0


Query: 43  ILQHGISEIWPNIVTGNNLWLWGHEWDKHGTYRETILFNQEQYFSLAMDTYIENNLSFIH 102
           ILQ GISEIWPNI+ GNNLWLWGHEWDKHGT  E ILF+Q++YFS AMDTYI+ NL  + 
Sbjct: 86  ILQPGISEIWPNIINGNNLWLWGHEWDKHGTCTEEILFDQDRYFSFAMDTYIDYNLLVLL 145

Query: 103 GSSQITPNGQVYSSTQGYAAISGKTGKTPAVRCNYNYWSGLQQLHEISLCYNWNATAFVD 162
           G+SQITPNGQ+YS  Q YAAI  KTGKTPAVRCNYN W+G QQ+HE+SLCYN +A+A VD
Sbjct: 146 GNSQITPNGQIYSRDQVYAAIRAKTGKTPAVRCNYNRWTGEQQMHEVSLCYNHDASAVVD 205

Query: 163 CPLNA 168
           CPLNA
Sbjct: 206 CPLNA 210

[Close]

BLAST of CaUC10G189580 vs. NCBI nr
Match: XP_022149793.1 (ribonuclease MC-like [Momordica charantia])

HSP 1 Score: 175.6 bits (444), Expect = 4.6e-40
Identity = 78/124 (62.90%), Postives = 93/124 (75.00%), Query Frame = 0


Query: 44  LQHGISEIWPNIVTGNNLWLWGHEWDKHGTYRETILFNQEQYFSLAMDTYIENNLSFIHG 103
           LQ GISEIWPN+ TG+N WLW HEWDKHGT  E+  ++Q++YF   MD YI NNL  I  
Sbjct: 86  LQPGISEIWPNVATGDNFWLWQHEWDKHGTCSESTFYDQQEYFGFGMDAYIHNNLQVILS 145

Query: 104 SSQITPNGQVYSSTQGYAAISGKTGKTPAVRCNYNYWSGLQQLHEISLCYNWNATAFVDC 163
           ++QITPNG+ Y+  Q YAAI  KTGKTPAVRCNYN  +G  QLHEISLC+  +A+ F DC
Sbjct: 146 NNQITPNGRTYTRDQVYAAIRAKTGKTPAVRCNYNSRTGASQLHEISLCFKKDASVFEDC 205

Query: 164 PLNA 168
           PLNA
Sbjct: 206 PLNA 209

[Close]

BLAST of CaUC10G189580 vs. NCBI nr
Match: XP_038904516.1 (ribonuclease MC-like [Benincasa hispida])

HSP 1 Score: 123.6 bits (309), Expect = 2.1e-24
Identity = 61/143 (42.66%), Postives = 82/143 (57.34%), Query Frame = 0


Query: 43  ILQHGISEIWPNIVTGNNLWLWGHEWDKHGTYRETILFNQEQYFSLAMDTYIENNLSFIH 102
           +L+  ++E+W N++TG+N WLW  EWDKHGT  E ILF+Q  YF   M+T       +  
Sbjct: 97  VLEPRLNEMWGNVITGDNQWLWKPEWDKHGTCIEDILFDQSGYFEYTMNTL------YYF 156

Query: 103 GSSQITPNGQVYSSTQGY-------AAISGKTGKTPAVRCNYNYWSGLQQLHEISLCYNW 162
              +I  NG ++ + +GY       + I  +TGK PAV CNYN+W+  QQLHEIS C   
Sbjct: 157 NPEEILKNGGIWPTQEGYYTLDEIKSVIKARTGKLPAVGCNYNHWTSYQQLHEISYCVTK 216

Query: 163 NATAFVDCPLNAIIILCGIHGAL 179
               FVDCP NA    C  H A+
Sbjct: 217 EGQTFVDCPSNA--NKCNGHSAM 231

[Close]

BLAST of CaUC10G189580 vs. NCBI nr
Match: XP_022158939.1 (ribonuclease MC-like [Momordica charantia])

HSP 1 Score: 114.8 bits (286), Expect = 9.6e-22
Identity = 61/139 (43.88%), Postives = 78/139 (56.12%), Query Frame = 0


Query: 30  SGTLNHSAILTLFILQHGISEIWPNIVTGNNLWLWGHEWDKHGTYRETILFNQEQYFSLA 89
           SGT  + A + L I Q  + + WPN++TG N   W +EW KHGT     L NQ  YF+  
Sbjct: 74  SGTPPYDARMILTI-QARLDQDWPNVITGQNPQFWSYEWTKHGTCSSAYL-NQFHYFNFG 133

Query: 90  MDTYIENNLSFIHGSSQITPNGQVYSSTQGYAAISGKTGKTPAVRCNYNYWSGLQQLHEI 149
           +  Y   +L  I     I PNGQ Y+ T    AI   TGK PA+RCN NY +G  QLHEI
Sbjct: 134 LWVYTNYDLQSILYQYGIYPNGQQYTKTVVQNAIYSATGKWPALRCNNNYRTGNMQLHEI 193

Query: 150 SLCYNWNATAFVDCPLNAI 169
           SLC++ N    +DCP N +
Sbjct: 194 SLCFSKNGQILIDCPFNVV 210

[Close]

BLAST of CaUC10G189580 vs. ExPASy Swiss-Prot
Match: P80022 (Extracellular ribonuclease LE OS=Solanum lycopersicum OX=4081 PE=1 SV=2)

HSP 1 Score: 80.9 bits (198), Expect = 2.0e-14
Identity = 39/116 (33.62%), Postives = 65/116 (56.03%), Query Frame = 0


Query: 52  WPNIV--TGNNLWLWGHEWDKHGTYRETILFNQEQYFSLAMDTYIENNLSFIHGSSQITP 111
           WP +   +G+    W HEW+KHGT  E++L NQ  YF  A+D   + +L  I   + I P
Sbjct: 101 WPTLACPSGSGSTFWSHEWEKHGTCAESVLTNQHAYFKKALDLKNQIDLLSILQGADIHP 160

Query: 112 NGQVYSSTQGYAAISGKTGKTPAVRCNYNYWSGLQQLHEISLCYNWNATAFVDCPL 166
           +G+ Y       AI    G TP ++CN +  SG  QL+++ +C + + ++ ++CP+
Sbjct: 161 DGESYDLVNIRNAIKSAIGYTPWIQCNVDQ-SGNSQLYQVYICVDGSGSSLIECPI 215

[Close]

BLAST of CaUC10G189580 vs. ExPASy Swiss-Prot
Match: P23540 (Ribonuclease MC OS=Momordica charantia OX=3673 PE=1 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 3.8e-13
Identity = 41/122 (33.61%), Postives = 61/122 (50.00%), Query Frame = 0


Query: 44  LQHGISEIWPNIVTGNNLWLWGHEWDKHGTYRETILFNQEQYFSLAMDTYIENNLSFIHG 103
           LQ  ++ +WPN++  NN   W HEW KHGT  E+  FNQ  YF LA+D  + NN   I  
Sbjct: 62  LQSQLNTLWPNVLRANNQQFWSHEWTKHGTCSES-TFNQAAYFKLAVD--MRNNYDIIGA 121

Query: 104 --SSQITPNGQVYSSTQGYAAISGKTGKTPAVRCNYNYWSGLQQLHEISLCYNWNATAFV 163
                  PNG+  S       +  K GK P +RC  +  + +  L ++  C+  + +  +
Sbjct: 122 LRPHAAGPNGRTKSRQAIKGFLKAKFGKFPGLRCRTDPQTKVSYLVQVVACFAQDGSTLI 180

[Close]

BLAST of CaUC10G189580 vs. ExPASy Swiss-Prot
Match: P42813 (Ribonuclease 1 OS=Arabidopsis thaliana OX=3702 GN=RNS1 PE=1 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.2e-11
Identity = 40/128 (31.25%), Postives = 69/128 (53.91%), Query Frame = 0


Query: 40  TLFILQHGISEIWPNIV--TGNNLWLWGHEWDKHGTYRETILFNQEQYFSLAMDTYIENN 99
           T+  L   + + WP +   +G+    W HEW+KHGT  E+++ +Q +YF  A++   + N
Sbjct: 90  TISDLLTSMKKSWPTLACPSGSGEAFWEHEWEKHGTCSESVI-DQHEYFQTALNLKQKTN 149

Query: 100 LSFIHGSSQITPNGQVYSSTQGYAAISGKTGKTPAVRCNYNYWSGLQQLHEISLCYNWNA 159
           L      + I P+G+ YS      +I    G TP V CN +  SG  QL+++ LC + + 
Sbjct: 150 LLGALTKAGINPDGKSYSLESIRDSIKESIGFTPWVECNRD-GSGNSQLYQVYLCVDRSG 209

Query: 160 TAFVDCPL 166
           +  ++CP+
Sbjct: 210 SGLIECPV 215

[Close]

BLAST of CaUC10G189580 vs. ExPASy Swiss-Prot
Match: P80196 (Intracellular ribonuclease LX OS=Solanum lycopersicum OX=4081 GN=RNALX PE=1 SV=2)

HSP 1 Score: 69.7 bits (169), Expect = 4.7e-11
Identity = 45/132 (34.09%), Postives = 64/132 (48.48%), Query Frame = 0


Query: 52  WPNIV--TGNNLWLWGHEWDKHGTYRETILFNQEQYFSLAMDTYIENNLSFIHGSSQITP 111
           WP++   + + L  W HEW KHGT       NQ  YF  A+D   ++NL     ++ I P
Sbjct: 100 WPSLACPSSDGLKFWSHEWLKHGT---CSALNQHAYFQTALDFKTKSNLLQNLNNAGIKP 159

Query: 112 -NGQVYSSTQGYAAISGKTGKTPAVRCNYNYWSGLQQLHEISLCYNWNATAFVDCPLNAI 171
            NG  Y       AI    G TP + CN +   G  QL+++ LC + +A+ F+DCP+   
Sbjct: 160 RNGDYYGVESIKKAIEKGVGHTPFIECNVDS-QGNHQLYQVYLCVDSSASKFIDCPIFPH 219

Query: 172 IILCGIHGALPS 181
              CG     PS
Sbjct: 220 GGKCGSKIEFPS 227

[Close]

BLAST of CaUC10G189580 vs. ExPASy Swiss-Prot
Match: P42815 (Ribonuclease 3 OS=Arabidopsis thaliana OX=3702 GN=RNS3 PE=2 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 9.7e-09
Identity = 37/124 (29.84%), Postives = 60/124 (48.39%), Query Frame = 0


Query: 44  LQHGISEIWPNIVTGNN--LWLWGHEWDKHGTYRETILFNQEQYFSLAMDTYIENNLSFI 103
           L   +   WP +   +N  +  W HEW+KHGT  E+ L +Q  YF   +    + NL   
Sbjct: 86  LMSDLQREWPTLSCPSNDGMKFWTHEWEKHGTCAESEL-DQHDYFEAGLKLKQKANLLHA 145

Query: 104 HGSSQITPNGQVYSSTQGYAAISGKTGKTPAVRCNYNYWSGLQQLHEISLCYNWNATAFV 163
             ++ I P+ + Y        I    G  P + CN +  S   QL++I LC + +A+ F+
Sbjct: 146 LTNAGIKPDDKFYEMKDIENTIKQVVGFAPGIECNKDS-SHNSQLYQIYLCVDTSASKFI 205

Query: 164 DCPL 166
           +CP+
Sbjct: 206 NCPV 207

[Close]

BLAST of CaUC10G189580 vs. ExPASy TrEMBL
Match: K7NBR4 (S-RNase OS=Siraitia grosvenorii OX=190515 PE=2 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 1.5e-49
Identity = 93/125 (74.40%), Postives = 106/125 (84.80%), Query Frame = 0


Query: 43  ILQHGISEIWPNIVTGNNLWLWGHEWDKHGTYRETILFNQEQYFSLAMDTYIENNLSFIH 102
           ILQ GISEIWPNI+ GNNLWLWGHEWDKHGT  E ILF+Q++YFS AMDTYI+ NL  + 
Sbjct: 86  ILQPGISEIWPNIINGNNLWLWGHEWDKHGTCTEEILFDQDRYFSFAMDTYIDYNLLVLL 145

Query: 103 GSSQITPNGQVYSSTQGYAAISGKTGKTPAVRCNYNYWSGLQQLHEISLCYNWNATAFVD 162
           G+SQITPNGQ+YS  Q YAAI  KTGKTPAVRCNYN W+G QQ+HE+SLCYN +A+A VD
Sbjct: 146 GNSQITPNGQIYSRDQVYAAIRAKTGKTPAVRCNYNRWTGEQQMHEVSLCYNHDASAVVD 205

Query: 163 CPLNA 168
           CPLNA
Sbjct: 206 CPLNA 210

[Close]

BLAST of CaUC10G189580 vs. ExPASy TrEMBL
Match: A0A6J1D7Q5 (ribonuclease MC-like OS=Momordica charantia OX=3673 GN=LOC111018138 PE=3 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 2.2e-40
Identity = 78/124 (62.90%), Postives = 93/124 (75.00%), Query Frame = 0


Query: 44  LQHGISEIWPNIVTGNNLWLWGHEWDKHGTYRETILFNQEQYFSLAMDTYIENNLSFIHG 103
           LQ GISEIWPN+ TG+N WLW HEWDKHGT  E+  ++Q++YF   MD YI NNL  I  
Sbjct: 86  LQPGISEIWPNVATGDNFWLWQHEWDKHGTCSESTFYDQQEYFGFGMDAYIHNNLQVILS 145

Query: 104 SSQITPNGQVYSSTQGYAAISGKTGKTPAVRCNYNYWSGLQQLHEISLCYNWNATAFVDC 163
           ++QITPNG+ Y+  Q YAAI  KTGKTPAVRCNYN  +G  QLHEISLC+  +A+ F DC
Sbjct: 146 NNQITPNGRTYTRDQVYAAIRAKTGKTPAVRCNYNSRTGASQLHEISLCFKKDASVFEDC 205

Query: 164 PLNA 168
           PLNA
Sbjct: 206 PLNA 209

[Close]

BLAST of CaUC10G189580 vs. ExPASy TrEMBL
Match: A0A6J1E0X1 (ribonuclease MC-like OS=Momordica charantia OX=3673 GN=LOC111025395 PE=3 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 4.7e-22
Identity = 61/139 (43.88%), Postives = 78/139 (56.12%), Query Frame = 0


Query: 30  SGTLNHSAILTLFILQHGISEIWPNIVTGNNLWLWGHEWDKHGTYRETILFNQEQYFSLA 89
           SGT  + A + L I Q  + + WPN++TG N   W +EW KHGT     L NQ  YF+  
Sbjct: 74  SGTPPYDARMILTI-QARLDQDWPNVITGQNPQFWSYEWTKHGTCSSAYL-NQFHYFNFG 133

Query: 90  MDTYIENNLSFIHGSSQITPNGQVYSSTQGYAAISGKTGKTPAVRCNYNYWSGLQQLHEI 149
           +  Y   +L  I     I PNGQ Y+ T    AI   TGK PA+RCN NY +G  QLHEI
Sbjct: 134 LWVYTNYDLQSILYQYGIYPNGQQYTKTVVQNAIYSATGKWPALRCNNNYRTGNMQLHEI 193

Query: 150 SLCYNWNATAFVDCPLNAI 169
           SLC++ N    +DCP N +
Sbjct: 194 SLCFSKNGQILIDCPFNVV 210

[Close]

BLAST of CaUC10G189580 vs. ExPASy TrEMBL
Match: A0A2U1KBQ9 (Wounding-induced ribonuclease OS=Artemisia annua OX=35608 GN=CTI12_AA621420 PE=3 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 8.5e-16
Identity = 51/116 (43.97%), Postives = 69/116 (59.48%), Query Frame = 0


Query: 52  WPNIV--TGNNLWLWGHEWDKHGTYRETILFNQEQYFSLAMDTYIENNLSFIHGSSQITP 111
           WP +   + N L  WGHEWDKHGT  E++L NQ  YF+ A+    E NL     S+ I P
Sbjct: 101 WPTLACPSNNGLAFWGHEWDKHGTCSESVL-NQHSYFATALGLKNEINLLQALKSAGIQP 160

Query: 112 NGQVYSSTQGYAAISGKTGKTPAVRCNYNYWSGLQQLHEISLCYNWNATAFVDCPL 166
           NGQ YS +   +AI   +G TP + CN N  SG  QL++I LC + +A+ F+ CP+
Sbjct: 161 NGQKYSLSSIESAIQDASGYTPGIECN-NDSSGNSQLYQIYLCVDSSASGFIQCPV 214

[Close]

BLAST of CaUC10G189580 vs. ExPASy TrEMBL
Match: A0A2J6JVD4 (Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_8X52560 PE=3 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 8.5e-16
Identity = 51/116 (43.97%), Postives = 70/116 (60.34%), Query Frame = 0


Query: 52  WPNI--VTGNNLWLWGHEWDKHGTYRETILFNQEQYFSLAMDTYIENNLSFIHGSSQITP 111
           WP +   + N L  WGHEWDKHGT  E++L NQ  YF+ A+    E NL      + I P
Sbjct: 101 WPTLSCPSNNGLTFWGHEWDKHGTCSESVL-NQHAYFATALSLKNEINLLQALERAGIQP 160

Query: 112 NGQVYSSTQGYAAISGKTGKTPAVRCNYNYWSGLQQLHEISLCYNWNATAFVDCPL 166
           NGQ YS +   +AI G +G TP + CN N  SG  QL++I LC + +A+ F++CP+
Sbjct: 161 NGQKYSISDIKSAIKGASGYTPWIECN-NDSSGNSQLYQIYLCVDSSASGFIECPV 214

[Close]

BLAST of CaUC10G189580 vs. TAIR 10
Match: AT2G02990.1 (ribonuclease 1 )

HSP 1 Score: 71.6 bits (174), Expect = 8.7e-13
Identity = 40/128 (31.25%), Postives = 69/128 (53.91%), Query Frame = 0


Query: 40  TLFILQHGISEIWPNIV--TGNNLWLWGHEWDKHGTYRETILFNQEQYFSLAMDTYIENN 99
           T+  L   + + WP +   +G+    W HEW+KHGT  E+++ +Q +YF  A++   + N
Sbjct: 90  TISDLLTSMKKSWPTLACPSGSGEAFWEHEWEKHGTCSESVI-DQHEYFQTALNLKQKTN 149

Query: 100 LSFIHGSSQITPNGQVYSSTQGYAAISGKTGKTPAVRCNYNYWSGLQQLHEISLCYNWNA 159
           L      + I P+G+ YS      +I    G TP V CN +  SG  QL+++ LC + + 
Sbjct: 150 LLGALTKAGINPDGKSYSLESIRDSIKESIGFTPWVECNRD-GSGNSQLYQVYLCVDRSG 209

Query: 160 TAFVDCPL 166
           +  ++CP+
Sbjct: 210 SGLIECPV 215

[Close]

BLAST of CaUC10G189580 vs. TAIR 10
Match: AT1G14220.1 (Ribonuclease T2 family protein )

HSP 1 Score: 69.3 bits (168), Expect = 4.3e-12
Identity = 40/124 (32.26%), Postives = 65/124 (52.42%), Query Frame = 0


Query: 44  LQHGISEIWPNIVTGNN--LWLWGHEWDKHGTYRETILFNQEQYFSLAMDTYIENNLSFI 103
           L   + + WP +   +N     W HEW+KHGT  E+++ +Q +YF  A+    + NL  I
Sbjct: 92  LVSSLKKNWPTLSCPSNEGFNFWEHEWEKHGTCSESVM-DQHEYFENALKLKQKANLLQI 151

Query: 104 HGSSQITPNGQVYSSTQGYAAISGKTGKTPAVRCNYNYWSGLQQLHEISLCYNWNATAFV 163
             +S I P+   Y+  +   AI    G TP + CN +      QLH+I +C + + T F+
Sbjct: 152 LKNSGINPDDGFYNLDKITNAIKDGIGFTPGIECNKDPERN-AQLHQIYICVDTSGTEFI 211

Query: 164 DCPL 166
           +CP+
Sbjct: 212 ECPV 213

[Close]

BLAST of CaUC10G189580 vs. TAIR 10
Match: AT1G26820.1 (ribonuclease 3 )

HSP 1 Score: 62.0 bits (149), Expect = 6.9e-10
Identity = 37/124 (29.84%), Postives = 60/124 (48.39%), Query Frame = 0


Query: 44  LQHGISEIWPNIVTGNN--LWLWGHEWDKHGTYRETILFNQEQYFSLAMDTYIENNLSFI 103
           L   +   WP +   +N  +  W HEW+KHGT  E+ L +Q  YF   +    + NL   
Sbjct: 86  LMSDLQREWPTLSCPSNDGMKFWTHEWEKHGTCAESEL-DQHDYFEAGLKLKQKANLLHA 145

Query: 104 HGSSQITPNGQVYSSTQGYAAISGKTGKTPAVRCNYNYWSGLQQLHEISLCYNWNATAFV 163
             ++ I P+ + Y        I    G  P + CN +  S   QL++I LC + +A+ F+
Sbjct: 146 LTNAGIKPDDKFYEMKDIENTIKQVVGFAPGIECNKDS-SHNSQLYQIYLCVDTSASKFI 205

Query: 164 DCPL 166
           +CP+
Sbjct: 206 NCPV 207

[Close]

BLAST of CaUC10G189580 vs. TAIR 10
Match: AT1G14210.1 (Ribonuclease T2 family protein )

HSP 1 Score: 58.5 bits (140), Expect = 7.6e-09
Identity = 38/106 (35.85%), Postives = 53/106 (50.00%), Query Frame = 0


Query: 59  NNLWLWGHEWDKHGTYRETILFNQEQYFSLAMDTYIENNLSFIHGSSQITPNGQVYSSTQ 118
           N   LW HEW+KHGT  ++I F+Q  YF   +    + +L  I     I PN   YS  +
Sbjct: 109 NETNLWEHEWNKHGTCVQSI-FDQHSYFRTNLKFKHKVHLLNILIQKGIKPNDGFYSLDE 168

Query: 119 GYAAISGKTGKTPAVRCNYNYWSGLQQLHEISLCYNWNATAFVDCP 165
              AI    G  P + CN +   G +QL +I +C +  A  FV+CP
Sbjct: 169 IKNAIKCAIGFAPGIECNEDV-KGNKQLFQIYICLDNYAKEFVECP 212

[Close]

BLAST of CaUC10G189580 vs. TAIR 10
Match: AT2G39780.1 (ribonuclease 2 )

HSP 1 Score: 52.4 bits (124), Expect = 5.5e-07
Identity = 29/118 (24.58%), Postives = 53/118 (44.92%), Query Frame = 0


Query: 44  LQHGISEIWPNI-------VTGNNLWLWGHEWDKHGTYRETILFNQEQYFSLAMDTYIEN 103
           L  G+ + WP++         G     WGHEW+KHGT    +  ++  YF   ++ Y+++
Sbjct: 99  LMDGLEKYWPSLSCGSPSSCNGGKGSFWGHEWEKHGTCSSPVFHDEYNYFLTTLNLYLKH 158

Query: 104 NLS-FIHGSSQITPNGQVYSSTQGYAAISGKTGKTPAVRCNYNYWSGLQQLHEISLCY 154
           N++  ++ +  +  N + Y       AI      TP V C  +       + EI +C+
Sbjct: 159 NVTDVLYQAGYVASNSEKYPLGGIVTAIQNAFHITPEVVCKRD------AIDEIRICF 210

The following BLAST results are available for this feature:

BLAST of CaUC10G189580 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903744.1	4.6e-56	72.79	ribonuclease MC-like [Benincasa hispida]	[more]
AEM42996.1	3.2e-49	74.40	S-RNase [Siraitia grosvenorii]	[more]
XP_022149793.1	4.6e-40	62.90	ribonuclease MC-like [Momordica charantia]	[more]
XP_038904516.1	2.1e-24	42.66	ribonuclease MC-like [Benincasa hispida]	[more]
XP_022158939.1	9.6e-22	43.88	ribonuclease MC-like [Momordica charantia]	[more]

BLAST of CaUC10G189580 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P80022	2.0e-14	33.62	Extracellular ribonuclease LE OS=Solanum lycopersicum OX=4081 PE=1 SV=2	[more]
P23540	3.8e-13	33.61	Ribonuclease MC OS=Momordica charantia OX=3673 PE=1 SV=1	[more]
P42813	1.2e-11	31.25	Ribonuclease 1 OS=Arabidopsis thaliana OX=3702 GN=RNS1 PE=1 SV=1	[more]
P80196	4.7e-11	34.09	Intracellular ribonuclease LX OS=Solanum lycopersicum OX=4081 GN=RNALX PE=1 SV=2	[more]
P42815	9.7e-09	29.84	Ribonuclease 3 OS=Arabidopsis thaliana OX=3702 GN=RNS3 PE=2 SV=1	[more]

BLAST of CaUC10G189580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
K7NBR4	1.5e-49	74.40	S-RNase OS=Siraitia grosvenorii OX=190515 PE=2 SV=1	[more]
A0A6J1D7Q5	2.2e-40	62.90	ribonuclease MC-like OS=Momordica charantia OX=3673 GN=LOC111018138 PE=3 SV=1	[more]
A0A6J1E0X1	4.7e-22	43.88	ribonuclease MC-like OS=Momordica charantia OX=3673 GN=LOC111025395 PE=3 SV=1	[more]
A0A2U1KBQ9	8.5e-16	43.97	Wounding-induced ribonuclease OS=Artemisia annua OX=35608 GN=CTI12_AA621420 PE=3...	[more]
A0A2J6JVD4	8.5e-16	43.97	Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_8X52560 PE=3 SV=1	[more]

BLAST of CaUC10G189580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G02990.1	8.7e-13	31.25	ribonuclease 1	[more]
AT1G14220.1	4.3e-12	32.26	Ribonuclease T2 family protein	[more]
AT1G26820.1	6.9e-10	29.84	ribonuclease 3	[more]
AT1G14210.1	7.6e-09	35.85	Ribonuclease T2 family protein	[more]
AT2G39780.1	5.5e-07	24.58	ribonuclease 2	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001568	Ribonuclease T2-like	PFAM	PF00445	Ribonuclease_T2	coord: 45..163 e-value: 3.2E-19 score: 69.8
IPR001568	Ribonuclease T2-like	PANTHER	PTHR11240	RIBONUCLEASE T2	coord: 44..165
IPR036430	Ribonuclease T2-like superfamily	GENE3D	3.90.730.10		coord: 22..170 e-value: 5.3E-27 score: 97.0
IPR036430	Ribonuclease T2-like superfamily	SUPERFAMILY	55895	Ribonuclease Rh-like	coord: 48..166
None	No IPR available	PANTHER	PTHR11240:SF49	RIBONUCLEASE 3	coord: 44..165

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC10G189580.1	CaUC10G189580.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
molecular_function	GO:0033897	ribonuclease T2 activity
molecular_function	GO:0003723	RNA binding