CaUC10G189540 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTAACTCACAAACTTTTGATAGTTTTTACTTTGTTCAACAATGGCCACCAGCTGTTTGCGTTTTACAATCAGGACAATGTGTAAGACAAGGGTTACGATACTTCACAATTCATGGTGTGTGGTCTCAAAAAGGAGGAGGCTCCGTAACCAATTGCCCAGGAAATTCCTTTGATTTCAATAAGGTAAACTAGAAACACACAAAGTTTCTAATTTCTTTTATATTAATCATGAACCGATTCTAATTTTCAATGGACCAATATGAGTATAATTCAACTAGTTAATGTATTAGATATTACTTGATACGAAAATCCTAGCGAATTGGAATTAGAAACCCTTTTGGTATTAGAACCCCTAATTCTCAATCACTGAAACCCCTAAATCAACTCGATTTCATCCCTAAGAAATTGGGTTAGGTATAGATTGTCTTAATATCATCAAAGCTCTTGAGACAAAGACAAGTTCCTTGGCCCAAGATTCGAACACTCCACAAGATAAGATGATCAATCCCACTTGAATATTTTTGGCATGTAACTCAACACATGAATTGCAAAATTTAGAAGCTCTCCTAGCTAAACTTGAAATAAACACAAAAACCAAAATTGATTCATCTATAAAAACATATCAAAACAACCTAAAGGCAAGACTTTAATAGCCACCCAAAGAAAACCCGAATGCCACATCACAGTTCAAAATAAAATGACAAAAATATCCCTACTCAAAATATCATAAAATGGATAAAATTGGAAAATACTAAAATTACATCAAAATTATTAGGTAAAATATAAGTAATAATTTGATGCTTGGATGCTTCATGTCATTACTTCTCAGGCAAAAGTTTAAGGGATAACTTGTTTCTCTATTCTGATTTCTGTTTTTACATTTTGAAAATAACATAGTCATGTTTATATCTTATTTAATAATCATTTAAACCTTGTTTGGTAACCATTTGCTTTTTGATCTCTAGTTTTAAAAAATTAAGCCGATAAAACACTCATTCCACCTGTAACTGTTTTGCTTTGTTTATCTACTTTTTACTATTGTCTACAAAACTAAGCCAAGTTCTAAAAATCTAAAAAAAAAAAAAAAAAATAGTTCTTAAAAACTTTACTTTCGTTCTTGGAATTTGGATAAGAATTTAACTATTTTATTTAAGAAAGATGTAAACCATGATAAGAGATCGAAGAGGAAATAAATGATTATAATACAAAGTCCTAGTTTTTTATTTTTATATAATTAAGCTTTAAACCAAGTTTTACCTCTAAACTTCCTTCTTGTGTTGCCCACTTTCTATAAATGCTTTAAAAAAGTGAGTCAATTTTTTTTAAAAAAAAGAAAAAAAAAACTATTTTTTAAGAACTATTTTTTTCCTTTTTGAAATATTTCTCTTTGAAGTTTTTATTTCTATGTATTTATAATTTTCTCGATAAATTATCTTCTCTAATTATAGAAAAATTATTTAAATGACAAAATTGTTGAAAATATTTATAAATAATAGTAAAATATCACAGTGTATTTGGCATAGATTGCAAGATAGATACATATAGTAATCTATCGCGATCTATCACAAATAAATAGTAAAATTTTGCTGTATTTATAAATATTTAGGTTTATTTTCCTATATTTGAAAACAACTCCTAATTATATTTGTGTTCCTCTTCTAACATATCACTCAATTTCTCTAAAAATTAAATATCTTGGCCTAAATTTTTTTCTCTAACTTATATATTTCTAAAATTTCTTCATAGATTTTATTTCTCTCTAATAAATATATCTATTAAGTTTTCTCATGTTCCTCCTTAATTTTCACTCACTACACACATTCATCTTTATTTTGTAACATATTTTTCACTTAACTTTACTCTCTTTCTTTTTTCCAAACATATTTTCTTTTTTGAAAAAATCGACTTTTTTTAAATATAACAAAATGAGTTAAATTATTTACAAATATAGAAAATTTTCATTATCTATCAGCGATAGACCGCGATAGACTTCTATAACTCAAACGATAGAAATCTATCGCAGTTTATCACTGATAGACAGTGAAATTTTTCTATATTTGTAAATAGTTTGATATTTTTTCTATTTATAATAATTTTACTTAAAAAATGTGTATTAATATTTTTTTTTTCATCTATCTAAATGTACTAACTTTATTTTCATCTTTCTGCATCTTTTTCACTTTATAAAATATATCTTTATTTTTAGGAAAATCATAAATAGAGAAAATATAAAATTATTTATAAATATTAAAAAAATTTACTGTCTATTAGCCTGCAAAATATAAAAAAACAAAAGTTAGTTATCAAATATATATAAACAAATTATCAAATATATATAGTCTTTGTTTAAAAAAACAAAAGAAAGATTTACGAAACGGAGCTACAATAGTTCAAACCCCCAGCTTCTATGTTGTTTAAATTAATTTTGGATAAAAAATAAAAATGGGAAAATATGTAGTTTTTTGCATTTAAAAAATATGTAGTTCAGTTTCTAACATTTAATATTTAGAAGTGATGCTCCCTTACATATTAATGTTTTTAAATTATTTCTTTTAAGGTTTGTAAATTTCAAAAAATTAACTAATCACATTTAGAAACTTTTGAAACTAATTTGAAATTTAACAAATTTCAAACTAATTTTGAAATAACCAAAATCAATTTGGACATGTCTAAAATTACTTTTCAATTAAAATTTTAATGTTTGGCAATTATGAAAAAGTGATTCTCGGTCTATCCCTAAGATGTGATTTTCAAGTAGTTTTTGTTATGTAGTTGTGATTTTTTTTTATTTACTTAAAAAATACTATTATTTAATATTTAAAAAATTCTCTTATTTCACTCTGTTTTATCTTAAAATTTTAGAAAATTATTTTAAATGACAAAACTATTGTAAATATTTACAAATAATAGCAAAATATCACGGTCTATATTTATAAATATTTGAAATCATTTTTCTACATTTGAAAATAACCCTAAAATCTTCATATAAATTGTATTTCTTTTTGTTAAAAGTTTTGTCCATTTTTATCTTTATTTCTCTCTCATTCTTACTCTCCCAATTTTCTACCTCAAAAGTTTTAAAATTAATGTTTATTCTATTCTTCTTTTTCCAAATATCATTTTTCTCGTCTTTTCTCTCTTCAATTTTTTACCTCTTTCTAGTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTCTCTATATTTAAATTTCTTTCTCTTTATTTTTCTTGATCTCTTCCTCTAACATTTTGCTCTTGAATTTTTGTTATCTTCCCTCTTAACTTTTTTTCTCTCTTTAAAGTTATTCTCCATAAATTTTGTTAATCACCCAAAAAAAAGGTCTCTCATTTATATTTCTGTAACTTTATTTTTTTGCCATTGAATTTTCATTATATCTATCAAAATTATCTCTCTAAATTTCTCTAGTCTCTAAAAAAAAATATATATATCTTTGAATCTTTTTTCTAAGTCTCTAATTTTAATAGTAAACTGTTATTTCTCTCTATATAATCTTTGTCTAACCATCCTCTAATTTTTTGTTCAATCCTTGAATGTAATGTTTCTTTAGTAATTAATTTGATCATTCTAAAATTACTTTTGAAAACAAACATTGATCTTTTTAATTAAATTTAAATCAATTGAACAAATATGGAACCAGATATATATTATTTAACATGATTTATAAAACTTTTTCAAAATAAATTATAATTAAATAATTTAGCTCAAAAAATAATTATTTTAAAAGTCAATCTTAAATATGCCTTAAGTCATCGAAACTCACTTTTGATGGTACAAAATCACTTTCTTTTGATTGTACAAAATCACTTTTAAAAGTATTGGACCAAGTATTAGAATGGATTGTATGAAATATTAAATCACTATTATTTCTAAAAACACTCTCAAGTGTGCCCTTAATTCATTTTTTAAACTTTTCTCAACTCTTTAATATTATGTGGGAGTTTCAGATTGCACATTTAGAAAGCACTCTTTACACAAATTGGCCGAATTTGATAACGGGAGACAACATATTCTTTTGGGGTTACGAGTGGAACAAACATGGAATTTGCTCAGAAAGCAAGTTCAACCAAGCATCATACTTTCAAATGGCGATAAACATGAGGAACAATATCAACCTTCTAAGCACCTTGCGAGTTGGTGGAGTAACACCAAACGGAGGCTCAAAGGCGAAGCAAAGAGTTGAAAGTGCAATCTTCTCTGGTTATAAGGCATATCCACTTCTTCGATGTAAAACAACATCAAACAATCAAGTCCTATTGACGGAGATTGTTACGTGCTTTGATGATGATGGTGTCACCCTTTTAAACTGCACTAGATCAAGATCCAATTGTGCTGCTAGCTTTATTTTCTGA ATGGTTAACTCACAAACTTTTGATAGTTTTTACTTTGTTCAACAATGGCCACCAGCTGTTTGCGTTTTACAATCAGGACAATGTGTAAGACAAGGGTTACGATACTTCACAATTCATGGTGTGTGGTCTCAAAAAGGAGGAGGCTCCGTAACCAATTGCCCAGGAAATTCCTTTGATTTCAATAAGATTGCACATTTAGAAAGCACTCTTTACACAAATTGGCCGAATTTGATAACGGGAGACAACATATTCTTTTGGGGTTACGAGTGGAACAAACATGGAATTTGCTCAGAAAGCAAGTTCAACCAAGCATCATACTTTCAAATGGCGATAAACATGAGGAACAATATCAACCTTCTAAGCACCTTGCGAGTTGGTGGAGTAACACCAAACGGAGGCTCAAAGGCGAAGCAAAGAGTTGAAAGTGCAATCTTCTCTGGTTATAAGGCATATCCACTTCTTCGATGTAAAACAACATCAAACAATCAAGTCCTATTGACGGAGATTGTTACGTGCTTTGATGATGATGGTGTCACCCTTTTAAACTGCACTAGATCAAGATCCAATTGTGCTGCTAGCTTTATTTTCTGA ATGGTTAACTCACAAACTTTTGATAGTTTTTACTTTGTTCAACAATGGCCACCAGCTGTTTGCGTTTTACAATCAGGACAATGTGTAAGACAAGGGTTACGATACTTCACAATTCATGGTGTGTGGTCTCAAAAAGGAGGAGGCTCCGTAACCAATTGCCCAGGAAATTCCTTTGATTTCAATAAGATTGCACATTTAGAAAGCACTCTTTACACAAATTGGCCGAATTTGATAACGGGAGACAACATATTCTTTTGGGGTTACGAGTGGAACAAACATGGAATTTGCTCAGAAAGCAAGTTCAACCAAGCATCATACTTTCAAATGGCGATAAACATGAGGAACAATATCAACCTTCTAAGCACCTTGCGAGTTGGTGGAGTAACACCAAACGGAGGCTCAAAGGCGAAGCAAAGAGTTGAAAGTGCAATCTTCTCTGGTTATAAGGCATATCCACTTCTTCGATGTAAAACAACATCAAACAATCAAGTCCTATTGACGGAGATTGTTACGTGCTTTGATGATGATGGTGTCACCCTTTTAAACTGCACTAGATCAAGATCCAATTGTGCTGCTAGCTTTATTTTCTGA MVNSQTFDSFYFVQQWPPAVCVLQSGQCVRQGLRYFTIHGVWSQKGGGSVTNCPGNSFDFNKIAHLESTLYTNWPNLITGDNIFFWGYEWNKHGICSESKFNQASYFQMAINMRNNINLLSTLRVGGVTPNGGSKAKQRVESAIFSGYKAYPLLRCKTTSNNQVLLTEIVTCFDDDGVTLLNCTRSRSNCAASFIF Homology
BLAST of CaUC10G189540 vs. NCBI nr
Match: XP_008443402.1 (PREDICTED: ribonuclease MC-like [Cucumis melo]) HSP 1 Score: 316.2 bits (809), Expect = 1.9e-82 Identity = 144/196 (73.47%), Postives = 166/196 (84.69%), Query Frame = 0
BLAST of CaUC10G189540 vs. NCBI nr
Match: XP_038905534.1 (ribonuclease MC-like [Benincasa hispida]) HSP 1 Score: 315.5 bits (807), Expect = 3.3e-82 Identity = 145/196 (73.98%), Postives = 165/196 (84.18%), Query Frame = 0
BLAST of CaUC10G189540 vs. NCBI nr
Match: XP_004147499.1 (ribonuclease MC [Cucumis sativus] >KGN59560.1 hypothetical protein Csa_002553 [Cucumis sativus]) HSP 1 Score: 309.3 bits (791), Expect = 2.4e-80 Identity = 142/196 (72.45%), Postives = 162/196 (82.65%), Query Frame = 0
BLAST of CaUC10G189540 vs. NCBI nr
Match: XP_022935695.1 (ribonuclease MC-like [Cucurbita moschata]) HSP 1 Score: 300.1 bits (767), Expect = 1.4e-77 Identity = 137/196 (69.90%), Postives = 160/196 (81.63%), Query Frame = 0
BLAST of CaUC10G189540 vs. NCBI nr
Match: XP_023528964.1 (ribonuclease MC-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 296.6 bits (758), Expect = 1.6e-76 Identity = 134/193 (69.43%), Postives = 159/193 (82.38%), Query Frame = 0
BLAST of CaUC10G189540 vs. ExPASy Swiss-Prot
Match: P23540 (Ribonuclease MC OS=Momordica charantia OX=3673 PE=1 SV=1) HSP 1 Score: 211.1 bits (536), Expect = 1.2e-53 Identity = 99/193 (51.30%), Postives = 133/193 (68.91%), Query Frame = 0
BLAST of CaUC10G189540 vs. ExPASy Swiss-Prot
Match: P80022 (Extracellular ribonuclease LE OS=Solanum lycopersicum OX=4081 PE=1 SV=2) HSP 1 Score: 123.2 bits (308), Expect = 3.2e-27 Identity = 65/188 (34.57%), Postives = 102/188 (54.26%), Query Frame = 0
BLAST of CaUC10G189540 vs. ExPASy Swiss-Prot
Match: P42813 (Ribonuclease 1 OS=Arabidopsis thaliana OX=3702 GN=RNS1 PE=1 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 4.1e-27 Identity = 65/188 (34.57%), Postives = 95/188 (50.53%), Query Frame = 0
BLAST of CaUC10G189540 vs. ExPASy Swiss-Prot
Match: P80196 (Intracellular ribonuclease LX OS=Solanum lycopersicum OX=4081 GN=RNALX PE=1 SV=2) HSP 1 Score: 116.3 bits (290), Expect = 3.9e-25 Identity = 67/190 (35.26%), Postives = 95/190 (50.00%), Query Frame = 0
BLAST of CaUC10G189540 vs. ExPASy Swiss-Prot
Match: P42815 (Ribonuclease 3 OS=Arabidopsis thaliana OX=3702 GN=RNS3 PE=2 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 1.1e-24 Identity = 64/187 (34.22%), Postives = 92/187 (49.20%), Query Frame = 0
BLAST of CaUC10G189540 vs. ExPASy TrEMBL
Match: A0A1S3B8Q3 (Ribonuclease T(2) OS=Cucumis melo OX=3656 GN=LOC103486996 PE=3 SV=1) HSP 1 Score: 316.2 bits (809), Expect = 9.4e-83 Identity = 144/196 (73.47%), Postives = 166/196 (84.69%), Query Frame = 0
BLAST of CaUC10G189540 vs. ExPASy TrEMBL
Match: A0A0A0LC37 (Ribonuclease T(2) OS=Cucumis sativus OX=3659 GN=Csa_3G825050 PE=3 SV=1) HSP 1 Score: 309.3 bits (791), Expect = 1.1e-80 Identity = 142/196 (72.45%), Postives = 162/196 (82.65%), Query Frame = 0
BLAST of CaUC10G189540 vs. ExPASy TrEMBL
Match: A0A6J1FBD8 (Ribonuclease T(2) OS=Cucurbita moschata OX=3662 GN=LOC111442477 PE=3 SV=1) HSP 1 Score: 300.1 bits (767), Expect = 7.0e-78 Identity = 137/196 (69.90%), Postives = 160/196 (81.63%), Query Frame = 0
BLAST of CaUC10G189540 vs. ExPASy TrEMBL
Match: A0A6J1F776 (Ribonuclease T(2) OS=Cucurbita moschata OX=3662 GN=LOC111441482 PE=3 SV=1) HSP 1 Score: 292.0 bits (746), Expect = 1.9e-75 Identity = 132/196 (67.35%), Postives = 160/196 (81.63%), Query Frame = 0
BLAST of CaUC10G189540 vs. ExPASy TrEMBL
Match: A0A6J1J1Y7 (Ribonuclease T(2) OS=Cucurbita maxima OX=3661 GN=LOC111481960 PE=3 SV=1) HSP 1 Score: 290.4 bits (742), Expect = 5.5e-75 Identity = 132/196 (67.35%), Postives = 158/196 (80.61%), Query Frame = 0
BLAST of CaUC10G189540 vs. TAIR 10
Match: AT1G14220.1 (Ribonuclease T2 family protein ) HSP 1 Score: 124.4 bits (311), Expect = 1.0e-28 Identity = 69/200 (34.50%), Postives = 97/200 (48.50%), Query Frame = 0
BLAST of CaUC10G189540 vs. TAIR 10
Match: AT2G02990.1 (ribonuclease 1 ) HSP 1 Score: 122.9 bits (307), Expect = 2.9e-28 Identity = 65/188 (34.57%), Postives = 95/188 (50.53%), Query Frame = 0
BLAST of CaUC10G189540 vs. TAIR 10
Match: AT1G26820.1 (ribonuclease 3 ) HSP 1 Score: 114.8 bits (286), Expect = 8.0e-26 Identity = 64/187 (34.22%), Postives = 92/187 (49.20%), Query Frame = 0
BLAST of CaUC10G189540 vs. TAIR 10
Match: AT1G14210.1 (Ribonuclease T2 family protein ) HSP 1 Score: 96.3 bits (238), Expect = 2.9e-20 Identity = 62/205 (30.24%), Postives = 91/205 (44.39%), Query Frame = 0
BLAST of CaUC10G189540 vs. TAIR 10
Match: AT2G39780.1 (ribonuclease 2 ) HSP 1 Score: 72.0 bits (175), Expect = 5.9e-13 Identity = 56/191 (29.32%), Postives = 78/191 (40.84%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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