CaUC10G188920 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTGGGAGGGTAGTTTTAAACAAATTTTGAAAGTTGAAGGACATTTGTGTAAACTTTTCAAAAGTTTGTTGAAATTGTTTTACACAGGATCCAAAGCGCAGACCACTTTTTATAATTTCGCCTTAAACATCATACAGCTTTTCTTCCCCACTGTTCCCCGCTCCGCCGGATCCTGCCTTCTTCTCCGTTAAGCAATTTCCCATTCTTAAGTCTTGACTTCACAAAACCAAAATGAGGAGTTACGACGAACAGAAAAACCATAAAATAATCTTCAACTTTTTAAAAATAAAAATTCACATAGGAGACAGAGAGTTCAGTTTCCGTACGACAAATAGATCGGGAAAACCAAACGTTGTAAAGCTTCCAGCTCATCCTCCATTCTTTATACAAACTTCTTTCCCACATCCCAGTCCTCTCGAGTTCAGAGAAATTTCTGTTTTCCAATTTTACCCCTCTTCGCCATTTCCAAACTGCAAACTAATTAAAATCCCTCTTTTTCCCTTCTCCCTCTCCCACACTTCCATTTCAATGTCCGCTTTCGATTCGGCCCACGGCGGCGGCCGCAGGGTCGACATCGTCAGCGGCAAACGCAACGGTGGACGCATCGCTGCTCAGATCTACAGGTCGCCGAATCTGGATACGACTGCGAACCGGGGCGGGTCGGCGGGGAAACCGTGGGGCTTCGGCGACCCGGAAGCGAAGCGGAGGAAGAGGATCGCCAAGTATAAAGTTTATACGGTTGAAGGGAGAGTGAAGGATTCGCTGCGGAAGGGACTACGGTGGATTAAGGATAGGTGCTCCCGGATCGTCCATGGATTTTGATTACAACAAACAATCCACGGTTCTCACTTTTTCTTCTATCTTTTCTTTTTTTGTATTTTTTGAGTTGTTATTTATTTTCATCACTTTATTTATTTTCAATCATGTAATCTTAGTCTTATTTCATTTTGATTAGTTAATAGTTTTTTTTTTTTTTTTTTTTTTAAGTACAATCGTGGTTTTGTATTAAAGGATTTTTAAATGTTAAACCATTAGAATCGTACAAATGATCATTAGAAATTATAAGAATTGATGTTTTAAAAAAAAATATGGTCAAAATTATATAGATTGAGATTATTAGATATAATTCTTAGGAATTTTGACTTGAAAATACTTAAAATTTTGTGTCTTTTTGTTTTCATTTTGATTTAGAACTTTTGATTTGATGAAGAGTGTATTGCTCAACATCAAATGATTTAAGTTAAATATTATTTTGTTTCTATCAATTTAAGATCCCTCAAATTTATTTTATTTGAAGATCAAAATTGTTTTTAGATTTTATTTTGTTACCTTCTTAACTTAGTATTCATTTTGAGAGTTTAGATCCAAAACACATTTTAGTTTAACTTAATAAAAACCTAAAATGATAGAGATTCATTTTATTTTTAAATCGTTACATATAAATCAAGCAAGAATACAAATAAAAACCAAATATATATGGTGTCATATGCTTAAACATAGATTAATGAACTAAAAATGCTCCATTAATGTATAACACCGAACACCATAAACCTTTTCATTTTATCACTAATTTTTTCCTTTTACCCCCATCATAAACATTCTCATAATTCTACCTTATTAATATCAATATGATTCATCAAATATGAAATTTTTTCAGAAACTTTAGTCTCCAGTAGAATTATTTTTCATGTTATTAGTCGAATGTTTTAGCCAATTGATCTCTTAATCATCTCATTGTAGCGGATATCAGAGTTAGAGCGTTGAAGCCTCATTTGTGCATAGAATTGAGCTATGTACATCTCTGCTTTGGCATCAATCATCTCGTCTTCGCCCTTCGTGTTGTCAAAGACTTCATCATTGCTTTCTTCTTCGTCATTTTTGTCCATATCTTGAAGGTTGAAAGCAGAGGCATACCTAAATTAAGAAAAAGAGCGGATTAAATTTATTATAACTTTTAACCTAAACTTTTAGGCTAAATCGTGGTTCACTACAATAGAAGTTTTGTGTTAGAATATTTGTAATGTCAATTTTTTCTAGTTAAGAACACAACGCCGT TTGGGAGGGTAGTTTTAAACAAATTTTGAAAGTTGAAGGACATTTGTGTAAACTTTTCAAAAGTTTGTTGAAATTGTTTTACACAGGATCCAAAGCGCAGACCACTTTTTATAATTTCGCCTTAAACATCATACAGCTTTTCTTCCCCACTGTTCCCCGCTCCGCCGGATCCTGCCTTCTTCTCCGTTAAGCAATTTCCCATTCTTAAGTCTTGACTTCACAAAACCAAAATGAGGAGTTACGACGAACAGAAAAACCATAAAATAATCTTCAACTTTTTAAAAATAAAAATTCACATAGGAGACAGAGAGTTCAGTTTCCGTACGACAAATAGATCGGGAAAACCAAACGTTGTAAAGCTTCCAGCTCATCCTCCATTCTTTATACAAACTTCTTTCCCACATCCCAGTCCTCTCGAGTTCAGAGAAATTTCTGTTTTCCAATTTTACCCCTCTTCGCCATTTCCAAACTGCAAACTAATTAAAATCCCTCTTTTTCCCTTCTCCCTCTCCCACACTTCCATTTCAATGTCCGCTTTCGATTCGGCCCACGGCGGCGGCCGCAGGGTCGACATCGTCAGCGGCAAACGCAACGGTGGACGCATCGCTGCTCAGATCTACAGGTCGCCGAATCTGGATACGACTGCGAACCGGGGCGGGTCGGCGGGGAAACCGTGGGGCTTCGGCGACCCGGAAGCGAAGCGGAGGAAGAGGATCGCCAAGTATAAAGTTTATACGGTTGAAGGGAGAGTGAAGGATTCGCTGCGGAAGGGACTACGGTGGATTAAGGATAGGTGCTCCCGGATCGTCCATGGATTTTGATTACAACAAACAATCCACGCGGATATCAGAGTTAGAGCGTTGAAGCCTCATTTGTGCATAGAATTGAGCTATGTACATCTCTGCTTTGGCATCAATCATCTCGTCTTCGCCCTTCGTGTTGTCAAAGACTTCATCATTGCTTTCTTCTTCGTCATTTTTGTCCATATCTTGAAGGTTGAAAGCAGAGGCATACCTAAATTAAGAAAAAGAGCGGATTAAATTTATTATAACTTTTAACCTAAACTTTTAGGCTAAATCGTGGTTCACTACAATAGAAGTTTTGTGTTAGAATATTTGTAATGTCAATTTTTTCTAGTTAAGAACACAACGCCGT ATGAGGAGTTACGACGAACAGAAAAACCATAAAATAATCTTCAACTTTTTAAAAATAAAAATTCACATAGGAGACAGAGAGTTCAGTTTCCGTACGACAAATAGATCGGGAAAACCAAACGTTGTAAAGCTTCCAGCTCATCCTCCATTCTTTATACAAACTTCTTTCCCACATCCCAGTCCTCTCGAGTTCAGAGAAATTTCTGTTTTCCAATTTTACCCCTCTTCGCCATTTCCAAACTGCAAACTAATTAAAATCCCTCTTTTTCCCTTCTCCCTCTCCCACACTTCCATTTCAATGTCCGCTTTCGATTCGGCCCACGGCGGCGGCCGCAGGGTCGACATCGTCAGCGGCAAACGCAACGGTGGACGCATCGCTGCTCAGATCTACAGGTCGCCGAATCTGGATACGACTGCGAACCGGGGCGGGTCGGCGGGGAAACCGTGGGGCTTCGGCGACCCGGAAGCGAAGCGGAGGAAGAGGATCGCCAAGTATAAAGTTTATACGGTTGAAGGGAGAGTGAAGGATTCGCTGCGGAAGGGACTACGGTGGATTAAGGATAGGTGCTCCCGGATCGTCCATGGATTTTGA MRSYDEQKNHKIIFNFLKIKIHIGDREFSFRTTNRSGKPNVVKLPAHPPFFIQTSFPHPSPLEFREISVFQFYPSSPFPNCKLIKIPLFPFSLSHTSISMSAFDSAHGGGRRVDIVSGKRNGGRIAAQIYRSPNLDTTANRGGSAGKPWGFGDPEAKRRKRIAKYKVYTVEGRVKDSLRKGLRWIKDRCSRIVHGF Homology
BLAST of CaUC10G188920 vs. NCBI nr
Match: KAA0044404.1 (hypothetical protein E6C27_scaffold46G001330 [Cucumis melo var. makuwa] >TYK29531.1 hypothetical protein E5676_scaffold655G001340 [Cucumis melo var. makuwa]) HSP 1 Score: 159.5 bits (402), Expect = 3.0e-35 Identity = 82/99 (82.83%), Postives = 85/99 (85.86%), Query Frame = 0
BLAST of CaUC10G188920 vs. NCBI nr
Match: XP_022998630.1 (uncharacterized protein LOC111493216 [Cucurbita maxima]) HSP 1 Score: 152.9 bits (385), Expect = 2.8e-33 Identity = 77/100 (77.00%), Postives = 84/100 (84.00%), Query Frame = 0
BLAST of CaUC10G188920 vs. NCBI nr
Match: KGN52839.1 (hypothetical protein Csa_014389 [Cucumis sativus]) HSP 1 Score: 151.8 bits (382), Expect = 6.3e-33 Identity = 74/88 (84.09%), Postives = 78/88 (88.64%), Query Frame = 0
BLAST of CaUC10G188920 vs. NCBI nr
Match: XP_022949041.1 (uncharacterized protein LOC111452504 [Cucurbita moschata] >KAG6606946.1 hypothetical protein SDJN03_00288, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 147.9 bits (372), Expect = 9.1e-32 Identity = 74/100 (74.00%), Postives = 82/100 (82.00%), Query Frame = 0
BLAST of CaUC10G188920 vs. NCBI nr
Match: XP_023524599.1 (uncharacterized protein LOC111788494 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 146.7 bits (369), Expect = 2.0e-31 Identity = 74/100 (74.00%), Postives = 82/100 (82.00%), Query Frame = 0
BLAST of CaUC10G188920 vs. ExPASy TrEMBL
Match: A0A5A7TMP6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001340 PE=4 SV=1) HSP 1 Score: 159.5 bits (402), Expect = 1.5e-35 Identity = 82/99 (82.83%), Postives = 85/99 (85.86%), Query Frame = 0
BLAST of CaUC10G188920 vs. ExPASy TrEMBL
Match: A0A6J1KD11 (uncharacterized protein LOC111493216 OS=Cucurbita maxima OX=3661 GN=LOC111493216 PE=4 SV=1) HSP 1 Score: 152.9 bits (385), Expect = 1.4e-33 Identity = 77/100 (77.00%), Postives = 84/100 (84.00%), Query Frame = 0
BLAST of CaUC10G188920 vs. ExPASy TrEMBL
Match: A0A0A0KV97 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G002560 PE=4 SV=1) HSP 1 Score: 151.8 bits (382), Expect = 3.1e-33 Identity = 74/88 (84.09%), Postives = 78/88 (88.64%), Query Frame = 0
BLAST of CaUC10G188920 vs. ExPASy TrEMBL
Match: A0A6J1GAV9 (uncharacterized protein LOC111452504 OS=Cucurbita moschata OX=3662 GN=LOC111452504 PE=4 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 4.4e-32 Identity = 74/100 (74.00%), Postives = 82/100 (82.00%), Query Frame = 0
BLAST of CaUC10G188920 vs. ExPASy TrEMBL
Match: A0A6J1A329 (uncharacterized protein LOC110414502 OS=Herrania umbratica OX=108875 GN=LOC110414502 PE=4 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 1.3e-20 Identity = 58/97 (59.79%), Postives = 70/97 (72.16%), Query Frame = 0
BLAST of CaUC10G188920 vs. TAIR 10
Match: AT2G47480.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 79.0 bits (193), Expect = 4.9e-15 Identity = 46/108 (42.59%), Postives = 60/108 (55.56%), Query Frame = 0
BLAST of CaUC10G188920 vs. TAIR 10
Match: AT3G62640.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 70.5 bits (171), Expect = 1.7e-12 Identity = 37/94 (39.36%), Postives = 52/94 (55.32%), Query Frame = 0
BLAST of CaUC10G188920 vs. TAIR 10
Match: AT2G19460.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 66.6 bits (161), Expect = 2.5e-11 Identity = 24/51 (47.06%), Postives = 39/51 (76.47%), Query Frame = 0
BLAST of CaUC10G188920 vs. TAIR 10
Match: AT3G05725.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 65.1 bits (157), Expect = 7.3e-11 Identity = 33/83 (39.76%), Postives = 51/83 (61.45%), Query Frame = 0
BLAST of CaUC10G188920 vs. TAIR 10
Match: AT5G11970.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 65.1 bits (157), Expect = 7.3e-11 Identity = 34/92 (36.96%), Postives = 52/92 (56.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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