CaUC10G188650 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC10G188650
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	mitochondrial zinc maintenance protein 1, mitochondrial
Location	Ciama_Chr10: 21413867 .. 21416134 (+)
RNA-Seq Expression	CaUC10G188650
Synteny	CaUC10G188650

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GATCATGAAAGGGGAAGTTCTAAGCGCCTACAGAGCCTTGCTCAGGGCAACCAAGAAATCCTTCGCCGGCGACACCTTGATGCTGACCGAGTCAGCCGCCGAGGTCCGCCGGAAGTTCGAAGAGAGCCGCCATGTGACCTCCGAGGCCGAGATTCGTAAACTGCTTGAAGAAGCTCGTGAGGCCTCGCATTTCATCTCCAATATGATCGTTCAGGCCAAGCTCACTTCTCGCGGCGGCTATGGTATTCTACCTCGTTCTTTTTCACTTTCCGATTCATTTTCGGTATTCCTCCTCGATTACTTGAACGAATAAAACCAACAACTAATCAAACACTTGGCTAACCGAATTGTGAATCTGAAATGAACGCACTGCACCCCACATGTTTGATAAAATGCTTCACCCAATTATTTCCGCTTTTTATTTACTCAAAGCTAGTGGGTTCGTAGAAAAACGCTAGAAACTATTGTGTACTCTTCTGGGGTTATTTGGTTCTTAATTTTGCTAGGCCGGTGTTTATGAAGCCTTAGATTAGGAATTGACAGTTGAGAATGAGTAAATTGTGTTTGTATCATAGAATAGGTTATAGAAATACAAATAGAAACACAAGTTCGTGTAATCTGGATGGTTGTTTACTTAACTATGTTAGCAGTGTTCTATTTCCATTTTTGAACCCAATAAAGTGTGGAAGATTCAAACTTCAAACCTTACAAGCTTACTTGAACAGGATCTGTTCTACAGGTTGTACAATTGTGTCTTTGAGTTCTAAAGATTCAAACTTCATACTTTTAAAGGAGATTATCAATGCCTTAACCTATTGAGACATTCTCAAGCTGGATGGAGTGTTAACTGTTATTAGCAAACTCACAAATTTGGATAGACAAGCCCATATATGAAACAGAAGTTTGAGTTCTTAACTTTGAATTATACAAATCCATCCTATGAATCAAATACCTTTTAAGGTGCTAACTTAACATGTCGAACATCCTAAAAATCCCCTTTTTAATACTTATAAACAAAGTCTATGAGAGCCAAACATTATTTTTGGGTATTGCTGCAGAAATGAAGCCGAGTAAAGACCATGCTGGTGCAACACTAGAAGTTCCTTCTGAAGAGCTTCTGCGCAAATCTACATGAGGTGAGACGATCGATGCTGACTTTCTGTTGGATAATTGTTTTAACTTTCAGCCATTTGCTTGACTAATCAGCATTTTGCTCTTGCCCCGTGAAGAACTTGGAATATTTTTCTGTTTCCTTTCATTGGTTCATTTCATATCCATATTTATTTGTGCTCGGTTAAATGTACTTTGTTGCTTGATTCTTGCGTTGGAGCTATTGAAAGTCCCGACCTTTTACCTTTTTATCCATTTTGATGGATACTTGGATAGAGAAAGTTGGACTCAAAAGTCAAATTTTGGCTTAAAACTCTTTTAAGTGAATGAAATTTTCCAGAATGAATTTATCAAGAAGACTGGCTTTTAGCAATGTTTAAGCAGTAGAAAAAGAATCCTCTTTTGAAATGACTTTGTTTGTATTGAAAAAGAAAGAAAAGTAGGAAAAAAAATGTTATAAGCAGAAATTCGAGAATGAATTAGACTCACTATAGTGTTCCATCCGGCAGGTAATTTTTGTACTACCATGCTTTCTTTAATCCTTGCTATGCTATGCCAACAATGGAGATGTTTTAGAAAATCGGAATTCCCTCGTTTGATATGTGAAACCAAAATGTTGTATTTGGAGTTTCCCTAGTGTTAGTATGGCGAAATGGGGCCATTCTAGTCCGTTCAGTGCTCTTCCACAGACTATTGACATAATTTGCTCAACTGAGATAGATTTCACGAAAAACCAGCTATATTTGATCTTGGCTGCTGACATTTCGTTTGTTTTGAAAAATGTATGGTAGAATAATCTCTCATTTACCTCCCATTTTTACATTAATTTTGACATGAAATGTGGGCTATAGGATTTAGCAAGTTGGAATAGGAACACCCTTTTTATTGTATATAACCTAATACCAAAAAGATCAATTTTTAAAAATAATAGTAAATGAAATGTAGTTATGTTAAGTGAACTGTGTTTTCAGGGACATCATATGTAGCATGGTCTGTTGTAGAGCTCAACTACACGTTATCAACTACACCATTCCTTTACAGAAATGACTAAAAAAAGATGAAAACTAGACAATGGAGGGCCTTAAGCCCAAATTTCAAGAATACATTTCAACTTCTTGATATTTGTAACCGCTCGAGAATAAATGAAACTTGAGATGC

mRNA sequence

GATCATGAAAGGGGAAGTTCTAAGCGCCTACAGAGCCTTGCTCAGGGCAACCAAGAAATCCTTCGCCGGCGACACCTTGATGCTGACCGAGTCAGCCGCCGAGGTCCGCCGGAAGTTCGAAGAGAGCCGCCATGTGACCTCCGAGGCCGAGATTCGTAAACTGCTTGAAGAAGCTCGTGAGGCCTCGCATTTCATCTCCAATATGATCGTTCAGGCCAAGCTCACTTCTCGCGGCGGCTATGGGACATCATATGTAGCATGGTCTGTTGTAGAGCTCAACTACACGTTATCAACTACACCATTCCTTTACAGAAATGACTAAAAAAAGATGAAAACTAGACAATGGAGGGCCTTAAGCCCAAATTTCAAGAATACATTTCAACTTCTTGATATTTGTAACCGCTCGAGAATAAATGAAACTTGAGATGC

Coding sequence (CDS)

ATGAAAGGGGAAGTTCTAAGCGCCTACAGAGCCTTGCTCAGGGCAACCAAGAAATCCTTCGCCGGCGACACCTTGATGCTGACCGAGTCAGCCGCCGAGGTCCGCCGGAAGTTCGAAGAGAGCCGCCATGTGACCTCCGAGGCCGAGATTCGTAAACTGCTTGAAGAAGCTCGTGAGGCCTCGCATTTCATCTCCAATATGATCGTTCAGGCCAAGCTCACTTCTCGCGGCGGCTATGGGACATCATATGTAGCATGGTCTGTTGTAGAGCTCAACTACACGTTATCAACTACACCATTCCTTTACAGAAATGACTAA

Protein sequence

MKGEVLSAYRALLRATKKSFAGDTLMLTESAAEVRRKFEESRHVTSEAEIRKLLEEAREASHFISNMIVQAKLTSRGGYGTSYVAWSVVELNYTLSTTPFLYRND

Homology

[Close]

BLAST of CaUC10G188650 vs. NCBI nr
Match: XP_038905396.1 (mitochondrial zinc maintenance protein 1, mitochondrial [Benincasa hispida])

HSP 1 Score: 144.8 bits (364), Expect = 4.1e-31
Identity = 78/79 (98.73%), Postives = 79/79 (100.00%), Query Frame = 0


Query: 1  MKGEVLSAYRALLRATKKSFAGDTLMLTESAAEVRRKFEESRHVTSEAEIRKLLEEAREA 60
          MKGEVLSAYRALLRATKKSFAGDTLMLTESA+EVRRKFEESRHVTSEAEIRKLLEEAREA
Sbjct: 1  MKGEVLSAYRALLRATKKSFAGDTLMLTESASEVRRKFEESRHVTSEAEIRKLLEEAREA 60

Query: 61 SHFISNMIVQAKLTSRGGY 80
          SHFISNMIVQAKLTSRGGY
Sbjct: 61 SHFISNMIVQAKLTSRGGY 79

[Close]

BLAST of CaUC10G188650 vs. NCBI nr
Match: XP_022155304.1 (mitochondrial zinc maintenance protein 1, mitochondrial [Momordica charantia])

HSP 1 Score: 142.5 bits (358), Expect = 2.1e-30
Identity = 77/79 (97.47%), Postives = 78/79 (98.73%), Query Frame = 0


Query: 1  MKGEVLSAYRALLRATKKSFAGDTLMLTESAAEVRRKFEESRHVTSEAEIRKLLEEAREA 60
          M+GEVLSAYRALLRAT KSFAGDTLMLTESAAEVRRKFEESRHVTSEAEIRKLLEEAREA
Sbjct: 1  MRGEVLSAYRALLRATHKSFAGDTLMLTESAAEVRRKFEESRHVTSEAEIRKLLEEAREA 60

Query: 61 SHFISNMIVQAKLTSRGGY 80
          SHFISNMIVQAKLTSRGGY
Sbjct: 61 SHFISNMIVQAKLTSRGGY 79

[Close]

BLAST of CaUC10G188650 vs. NCBI nr
Match: XP_008454342.1 (PREDICTED: mitochondrial zinc maintenance protein 1, mitochondrial [Cucumis melo])

HSP 1 Score: 139.8 bits (351), Expect = 1.3e-29
Identity = 74/79 (93.67%), Postives = 78/79 (98.73%), Query Frame = 0


Query: 1  MKGEVLSAYRALLRATKKSFAGDTLMLTESAAEVRRKFEESRHVTSEAEIRKLLEEAREA 60
          MKGEVLSAYR+LLRATKKSFAGDTLMLTESA+E+RRKF+ESRHVTSEAEIRKLLEEAREA
Sbjct: 1  MKGEVLSAYRSLLRATKKSFAGDTLMLTESASEIRRKFQESRHVTSEAEIRKLLEEAREA 60

Query: 61 SHFISNMIVQAKLTSRGGY 80
          SHFISNMIVQAK TSRGGY
Sbjct: 61 SHFISNMIVQAKRTSRGGY 79

[Close]

BLAST of CaUC10G188650 vs. NCBI nr
Match: XP_022949021.1 (mitochondrial zinc maintenance protein 1, mitochondrial [Cucurbita moschata] >XP_023524456.1 mitochondrial zinc maintenance protein 1, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 139.0 bits (349), Expect = 2.3e-29
Identity = 75/79 (94.94%), Postives = 77/79 (97.47%), Query Frame = 0


Query: 1  MKGEVLSAYRALLRATKKSFAGDTLMLTESAAEVRRKFEESRHVTSEAEIRKLLEEAREA 60
          +KGEVLSAYRALLRATKKSFAGDTLML ESAAEVRRKFEESRHVTS+ EIRKLLEEAREA
Sbjct: 2  VKGEVLSAYRALLRATKKSFAGDTLMLKESAAEVRRKFEESRHVTSDPEIRKLLEEAREA 61

Query: 61 SHFISNMIVQAKLTSRGGY 80
          SHFISNMIVQAKLTSRGGY
Sbjct: 62 SHFISNMIVQAKLTSRGGY 80

[Close]

BLAST of CaUC10G188650 vs. NCBI nr
Match: XP_004152250.1 (mitochondrial zinc maintenance protein 1, mitochondrial [Cucumis sativus] >KGN52811.1 hypothetical protein Csa_014848 [Cucumis sativus])

HSP 1 Score: 139.0 bits (349), Expect = 2.3e-29
Identity = 73/79 (92.41%), Postives = 78/79 (98.73%), Query Frame = 0


Query: 1  MKGEVLSAYRALLRATKKSFAGDTLMLTESAAEVRRKFEESRHVTSEAEIRKLLEEAREA 60
          MKGEVLSAYR+LLRATK+SFAGDTLMLTESA+E+RRKF+ESRHVTSE EIRKLLEEAREA
Sbjct: 1  MKGEVLSAYRSLLRATKRSFAGDTLMLTESASEIRRKFQESRHVTSEPEIRKLLEEAREA 60

Query: 61 SHFISNMIVQAKLTSRGGY 80
          SHFISNMIVQAKLTSRGGY
Sbjct: 61 SHFISNMIVQAKLTSRGGY 79

[Close]

BLAST of CaUC10G188650 vs. ExPASy TrEMBL
Match: A0A6J1DPV6 (mitochondrial zinc maintenance protein 1, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111022436 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 1.0e-30
Identity = 77/79 (97.47%), Postives = 78/79 (98.73%), Query Frame = 0


Query: 1  MKGEVLSAYRALLRATKKSFAGDTLMLTESAAEVRRKFEESRHVTSEAEIRKLLEEAREA 60
          M+GEVLSAYRALLRAT KSFAGDTLMLTESAAEVRRKFEESRHVTSEAEIRKLLEEAREA
Sbjct: 1  MRGEVLSAYRALLRATHKSFAGDTLMLTESAAEVRRKFEESRHVTSEAEIRKLLEEAREA 60

Query: 61 SHFISNMIVQAKLTSRGGY 80
          SHFISNMIVQAKLTSRGGY
Sbjct: 61 SHFISNMIVQAKLTSRGGY 79

[Close]

BLAST of CaUC10G188650 vs. ExPASy TrEMBL
Match: A0A1S3BYH1 (mitochondrial zinc maintenance protein 1, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103494771 PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 6.5e-30
Identity = 74/79 (93.67%), Postives = 78/79 (98.73%), Query Frame = 0


Query: 1  MKGEVLSAYRALLRATKKSFAGDTLMLTESAAEVRRKFEESRHVTSEAEIRKLLEEAREA 60
          MKGEVLSAYR+LLRATKKSFAGDTLMLTESA+E+RRKF+ESRHVTSEAEIRKLLEEAREA
Sbjct: 1  MKGEVLSAYRSLLRATKKSFAGDTLMLTESASEIRRKFQESRHVTSEAEIRKLLEEAREA 60

Query: 61 SHFISNMIVQAKLTSRGGY 80
          SHFISNMIVQAK TSRGGY
Sbjct: 61 SHFISNMIVQAKRTSRGGY 79

[Close]

BLAST of CaUC10G188650 vs. ExPASy TrEMBL
Match: A0A6J1KH11 (mitochondrial zinc maintenance protein 1, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111493140 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 1.1e-29
Identity = 75/79 (94.94%), Postives = 77/79 (97.47%), Query Frame = 0


Query: 1  MKGEVLSAYRALLRATKKSFAGDTLMLTESAAEVRRKFEESRHVTSEAEIRKLLEEAREA 60
          +KGEVLSAYRALLRATKKSFAGDTLML ESAAEVRRKFEESRHVTS+ EIRKLLEEAREA
Sbjct: 2  VKGEVLSAYRALLRATKKSFAGDTLMLKESAAEVRRKFEESRHVTSDPEIRKLLEEAREA 61

Query: 61 SHFISNMIVQAKLTSRGGY 80
          SHFISNMIVQAKLTSRGGY
Sbjct: 62 SHFISNMIVQAKLTSRGGY 80

[Close]

BLAST of CaUC10G188650 vs. ExPASy TrEMBL
Match: A0A0A0KY80 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G001780 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 1.1e-29
Identity = 73/79 (92.41%), Postives = 78/79 (98.73%), Query Frame = 0


Query: 1  MKGEVLSAYRALLRATKKSFAGDTLMLTESAAEVRRKFEESRHVTSEAEIRKLLEEAREA 60
          MKGEVLSAYR+LLRATK+SFAGDTLMLTESA+E+RRKF+ESRHVTSE EIRKLLEEAREA
Sbjct: 1  MKGEVLSAYRSLLRATKRSFAGDTLMLTESASEIRRKFQESRHVTSEPEIRKLLEEAREA 60

Query: 61 SHFISNMIVQAKLTSRGGY 80
          SHFISNMIVQAKLTSRGGY
Sbjct: 61 SHFISNMIVQAKLTSRGGY 79

[Close]

BLAST of CaUC10G188650 vs. ExPASy TrEMBL
Match: A0A6J1GAU2 (mitochondrial zinc maintenance protein 1, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111452487 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 1.1e-29
Identity = 75/79 (94.94%), Postives = 77/79 (97.47%), Query Frame = 0


Query: 1  MKGEVLSAYRALLRATKKSFAGDTLMLTESAAEVRRKFEESRHVTSEAEIRKLLEEAREA 60
          +KGEVLSAYRALLRATKKSFAGDTLML ESAAEVRRKFEESRHVTS+ EIRKLLEEAREA
Sbjct: 2  VKGEVLSAYRALLRATKKSFAGDTLMLKESAAEVRRKFEESRHVTSDPEIRKLLEEAREA 61

Query: 61 SHFISNMIVQAKLTSRGGY 80
          SHFISNMIVQAKLTSRGGY
Sbjct: 62 SHFISNMIVQAKLTSRGGY 80

[Close]

BLAST of CaUC10G188650 vs. TAIR 10
Match: AT3G62810.1 (complex 1 family protein / LVR family protein )

HSP 1 Score: 103.6 bits (257), Expect = 9.9e-23
Identity = 56/77 (72.73%), Postives = 64/77 (83.12%), Query Frame = 0


Query: 3  GEVLSAYRALLRATKKSFAGDTLMLTESAAEVRRKFEESRHVTSEAEIRKLLEEAREASH 62
          GE L AYRALLRATKKSFAGDT ML  SA+E+R+KFEE+R V S ++I +LLEEAREA+ 
Sbjct: 4  GEALIAYRALLRATKKSFAGDTEMLKASASEIRKKFEENRLVASNSDITRLLEEAREATQ 63

Query: 63 FISNMIVQAKLTSRGGY 80
          FIS MIVQAKL  RGGY
Sbjct: 64 FISTMIVQAKLNERGGY 80

The following BLAST results are available for this feature:

BLAST of CaUC10G188650 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038905396.1	4.1e-31	98.73	mitochondrial zinc maintenance protein 1, mitochondrial [Benincasa hispida]	[more]
XP_022155304.1	2.1e-30	97.47	mitochondrial zinc maintenance protein 1, mitochondrial [Momordica charantia]	[more]
XP_008454342.1	1.3e-29	93.67	PREDICTED: mitochondrial zinc maintenance protein 1, mitochondrial [Cucumis melo...	[more]
XP_022949021.1	2.3e-29	94.94	mitochondrial zinc maintenance protein 1, mitochondrial [Cucurbita moschata] >XP...	[more]
XP_004152250.1	2.3e-29	92.41	mitochondrial zinc maintenance protein 1, mitochondrial [Cucumis sativus] >KGN52...	[more]

BLAST of CaUC10G188650 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CaUC10G188650 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DPV6	1.0e-30	97.47	mitochondrial zinc maintenance protein 1, mitochondrial OS=Momordica charantia O...	[more]
A0A1S3BYH1	6.5e-30	93.67	mitochondrial zinc maintenance protein 1, mitochondrial OS=Cucumis melo OX=3656 ...	[more]
A0A6J1KH11	1.1e-29	94.94	mitochondrial zinc maintenance protein 1, mitochondrial OS=Cucurbita maxima OX=3...	[more]
A0A0A0KY80	1.1e-29	92.41	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G001780 PE=4 SV=1	[more]
A0A6J1GAU2	1.1e-29	94.94	mitochondrial zinc maintenance protein 1, mitochondrial OS=Cucurbita moschata OX...	[more]

BLAST of CaUC10G188650 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G62810.1	9.9e-23	72.73	complex 1 family protein / LVR family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008011	Complex 1 LYR protein	PFAM	PF05347	Complex1_LYR	coord: 4..60 e-value: 3.8E-13 score: 49.3
None	No IPR available	PANTHER	PTHR46749	COMPLEX III ASSEMBLY FACTOR LYRM7	coord: 2..80
None	No IPR available	PANTHER	PTHR46749:SF2	BNAA09G40160D PROTEIN	coord: 2..80
None	No IPR available	CDD	cd20267	Complex1_LYR_LYRM7	coord: 5..76 e-value: 2.51872E-27 score: 93.3971

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC10G188650.1	CaUC10G188650.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043086	negative regulation of catalytic activity
molecular_function	GO:0004857	enzyme inhibitor activity