CaUC10G188330 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTGCGAGTTCTCTGGTAGCTGAAGCTGTGTGGAAGCAGATCGAGTCGACTCGATTAGGTTCTTTCTTTGCCTTCACTTGTTTTTCGGATTTTCCTCTTCAATAACTCATAATTTCCTCCTTTTTTGGTCTCAATCTTTGCTGAAAGAAGCTGAAACCCATTTTCGTAGTGACTGATGATCAGCTTTCAGTGTGAGTATTCTCGATTCTTTCCATTTCGAGAAGTTTTTCTTAATCTTCTTATGTTCATGGAGCCTTGACTCTGACTGTGTCTTGGTGCTGCTCCAGCTTGCATTTCTTGTTTGGCAAGAACTTCGAGCGAGCTACGCGAATTGTTGATCAAAGAGGAGTGAAGAAGATTTCAGGCGAGCCAAGCAGACGGTCTATCTTTCAGGTCAATTTCTGTTTTTCTTTTTCCATCTTATTTTTGTTAAAAATTCATATCGATTTCAAGTTTGGCAAAATGATGATGCCGTTTGGGTTTGCTGAGAGTGCCCTAAAATAGAAACTATAGAATGTACTTCTGTTCTGTTTAAAGCCTCATTATATGGAATGACCTGGAGAATTAAACCATGTTTTTTCTCCATCTCACTAGATATAGAGAAAGATTTACCCCAAGGTTTAAGAATCTTTTGTATACATGTTTAATATGCTCTTCATCTGGGAATTAAAAAAACTAGCACGAAACTGAATGTTAGGAGGAGTTCTTTGGTTTGATAACCAGTAGTATGTACCACTAAACCTAAAAACTTAATATTAAGAATATGAATATAAGATTAAATACTGTAACCTATCAGCTTGAGCTTTTGGAGTTAGTCTTGAATTTGATTTAATATAGTATAAGAGTCGCTCCTGTCAATGTGAATATTTATCTCTCTGTTTCATATTAAAAGAAAAAAAAAGGTCATCTCTTTCAGCTTATAGCAAGATTGTTGAAAGTGGAATCCGCATCATGAGTCAAGTCTGCTTTATCATACAAATCAACCTCAGCCAAACCAAGAGCAAATATTTTCTTTTAATGTTAATGGATCAGTTTTGAGAAAACCAACCACTTTTAGTGGAGGGCTGCTCTAACCACCCTTAATTGATCTAGTGGTTAATAAGAGCCAATGTAAATAATAAAGGACTTATAGGGAGTGAGTTCTAGTTGTAGCCATGGTAACCATTTATATAGGATTTAATATCTTATGAGTCTTTTTAGCAATCAAATGTTATAGGATAAGACAATTGTGCTATGAGATGTGCAAGCTAGTTTGGACATTCATGGATATTAATAACAAAAAAGGAAAAATGAGCCACTTTTCCTTGATCACCATGGACATTCCTTGTTGCACACCTTTACCTTCCCCTAGTGCAAAGGAAATCTTGTGTTAGATTTTAAATTTCTATAAAATATTTTCCTCTCTAATTAATATCGATAGTCACTTGTTGGGTTTTTTGCTAATTTCCAAGCTTGCAAATGAAGGGAAATGTTTGGAATGTATACAAAAGATTAAGTATACAATAATCTAAATCATTTGGCTCAGTGGTGGTTTAATACTCAAGATGATAGATTATGGTATATTTATTCCTTTATACATGTTCTCAACAAAACTTTCCCAAAATAAAAGATCTTTTGTTGCTGGACTGAAAAAAAATGGAAATCGTTCATTTAGAATATGTAACAACTTAAGTACTTCTAAACTCGAGCATAGGTTGGGAAATGAGTTCAGTTTTCTTACAATGTTAGGTTGTGGGAGAATCTCGAAGGAAAGAGGAGTATTTCTGTTTCCCAGAAAACTTTTGTGCCTGTTATTCCTTCTTCTATGACATTGTGAACAGAGGAGAACAACTTTGTGTAAGCACCAGTTCTTTCTTATTAATGTGTAATGTATAAGTTGAAGCTTGAAGAAAATCCAATTCCTTCCTCTTCCCAACCATCTTTATTTTCTGCTTCTTTCTTTATTTCTTTCGTAGTGCAAGCATCAGTTGGCTGCAAGGCTTGCTGCTTCAGTGGGGGCTTGCATTGAAGTTAAAGTATCTGATGAAGAGCTGGCAATATTGTTGTCCAATCTCTAAGCCTGTACTGATTTTATCAAAGCCAACACTCTCAGTGCTTGAGGTTTGAGAGGTAATCAAACCACATAATTGTATGAATACCGACCTTTTCCTGCTGTACTCAAGTAGCTTTTATACTCAATCTAGATATTGAGCTCATATGAAATTTGCACTATAACCATCACAACATACTAGGTTTCACTGGTGAGCTGGTAATTCTAATTTGTTTGTCACTCACTAGTTACTAATATGTTATGTTTTATGAGTAAATGAGGACAAACCAACCCAGCAGTATTTTGAAATCAAACACCTCTTTTCCTTGCCTGTCTTACTATTTTGTTCTTCAGCTTTTGCATCATGAAATCTTGGTTAAAATATCATTTTGGTCCTTGTTAGGTTCCATTTTTTTTTAGTCCCCATACTTTCAATTGTCCAATTTAGGGCCATACACTTCCAATAAATCTTAAATTTAGTCCTTCAAAGTTAATTTTTATCGAAATTGATTAGATAATAATAATAGTTACATAACATTTTTTTAAAAAATATATGTAAGAAAGGACATTATGTAAATATATACTACATTTGTAAAGGGAATGGTTATAGAGGCAATTTTTCTTTAAGTTAACAACAAACTAACTGCCAGATTAATTTTTAGACTTATTGAGAAAGTATAGAGACCAAAATTGAACATTTGAAATTACATGGACTAAAGTGGAATGAAAGCAAAAGTATAAGGACCAAAATAGTATCTTGACCTAATTTCTTTTTCTTCATGATCCTGAATATTTGAGGGGAAACAATGAACATCTAGTAGATAACTTTTACTGGCACGCGTAAAAGGACTATATCAAACACTTTGCAGGTTACATCTTCATTTCTTGAAGGGCAGATGTAACTTTTTGGTGATGTACAACACGAAATGTAGATTTTTTCCCTCCTTCCATTTGAGATTGAACCAATTTAAGATTTAG ATGAGTGCGAGTTCTCTGGTAGCTGAAGCTGTGTGGAAGCAGATCGAGTCGACTCGATTAGTGACTGATGATCAGCTTTCAGTCTTGCATTTCTTGTTTGGCAAGAACTTCGAGCGAGCTACGCGAATTGTTGATCAAAGAGGAGTGAAGAAGATTTCAGGCGAGCCAAGCAGACGGTCTATCTTTCAGGTTGTGGGAGAATCTCGAAGGAAAGAGGAGTATTTCTGTTTCCCAGAAAACTTTTGTGCCTGTTATTCCTTCTTCTATGACATTGTGAACAGAGGAGAACAACTTTGTTGCAAGCATCAGTTGGCTGCAAGGCTTGCTGCTTCAGTGGGGGCTTGCATTGAAGTTAAATGCTTGAGGTTTGAGAGGTTACATCTTCATTTCTTGAAGGGCAGATGTAACTTTTTGGTGATGTACAACACGAAATGTAGATTTTTTCCCTCCTTCCATTTGAGATTGAACCAATTTAAGATTTAG ATGAGTGCGAGTTCTCTGGTAGCTGAAGCTGTGTGGAAGCAGATCGAGTCGACTCGATTAGTGACTGATGATCAGCTTTCAGTCTTGCATTTCTTGTTTGGCAAGAACTTCGAGCGAGCTACGCGAATTGTTGATCAAAGAGGAGTGAAGAAGATTTCAGGCGAGCCAAGCAGACGGTCTATCTTTCAGGTTGTGGGAGAATCTCGAAGGAAAGAGGAGTATTTCTGTTTCCCAGAAAACTTTTGTGCCTGTTATTCCTTCTTCTATGACATTGTGAACAGAGGAGAACAACTTTGTTGCAAGCATCAGTTGGCTGCAAGGCTTGCTGCTTCAGTGGGGGCTTGCATTGAAGTTAAATGCTTGAGGTTTGAGAGGTTACATCTTCATTTCTTGAAGGGCAGATGTAACTTTTTGGTGATGTACAACACGAAATGTAGATTTTTTCCCTCCTTCCATTTGAGATTGAACCAATTTAAGATTTAG MSASSLVAEAVWKQIESTRLVTDDQLSVLHFLFGKNFERATRIVDQRGVKKISGEPSRRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASVGACIEVKCLRFERLHLHFLKGRCNFLVMYNTKCRFFPSFHLRLNQFKI Homology
BLAST of CaUC10G188330 vs. NCBI nr
Match: XP_008454376.1 (PREDICTED: zinc finger SWIM domain-containing protein 7 [Cucumis melo]) HSP 1 Score: 235.3 bits (599), Expect = 3.6e-58 Identity = 114/119 (95.80%), Postives = 117/119 (98.32%), Query Frame = 0
BLAST of CaUC10G188330 vs. NCBI nr
Match: XP_038903696.1 (zinc finger SWIM domain-containing protein 7 [Benincasa hispida]) HSP 1 Score: 232.6 bits (592), Expect = 2.3e-57 Identity = 112/119 (94.12%), Postives = 116/119 (97.48%), Query Frame = 0
BLAST of CaUC10G188330 vs. NCBI nr
Match: XP_022983272.1 (zinc finger SWIM domain-containing protein 7 isoform X2 [Cucurbita maxima] >XP_022983279.1 zinc finger SWIM domain-containing protein 7 isoform X2 [Cucurbita maxima] >XP_022983286.1 zinc finger SWIM domain-containing protein 7 isoform X2 [Cucurbita maxima]) HSP 1 Score: 232.3 bits (591), Expect = 3.0e-57 Identity = 112/119 (94.12%), Postives = 116/119 (97.48%), Query Frame = 0
BLAST of CaUC10G188330 vs. NCBI nr
Match: XP_004152266.1 (zinc finger SWIM domain-containing protein 7 isoform X1 [Cucumis sativus] >KGN52782.1 hypothetical protein Csa_014785 [Cucumis sativus]) HSP 1 Score: 232.3 bits (591), Expect = 3.0e-57 Identity = 113/119 (94.96%), Postives = 115/119 (96.64%), Query Frame = 0
BLAST of CaUC10G188330 vs. NCBI nr
Match: XP_022942858.1 (zinc finger SWIM domain-containing protein 7 isoform X2 [Cucurbita moschata] >XP_022942859.1 zinc finger SWIM domain-containing protein 7 isoform X2 [Cucurbita moschata]) HSP 1 Score: 228.8 bits (582), Expect = 3.3e-56 Identity = 111/119 (93.28%), Postives = 114/119 (95.80%), Query Frame = 0
BLAST of CaUC10G188330 vs. ExPASy TrEMBL
Match: A0A1S3BZP2 (zinc finger SWIM domain-containing protein 7 OS=Cucumis melo OX=3656 GN=LOC103494794 PE=4 SV=1) HSP 1 Score: 235.3 bits (599), Expect = 1.7e-58 Identity = 114/119 (95.80%), Postives = 117/119 (98.32%), Query Frame = 0
BLAST of CaUC10G188330 vs. ExPASy TrEMBL
Match: A0A6J1J6W2 (zinc finger SWIM domain-containing protein 7 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111481893 PE=4 SV=1) HSP 1 Score: 232.3 bits (591), Expect = 1.5e-57 Identity = 112/119 (94.12%), Postives = 116/119 (97.48%), Query Frame = 0
BLAST of CaUC10G188330 vs. ExPASy TrEMBL
Match: A0A0A0KWG5 (SWIM-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G001010 PE=4 SV=1) HSP 1 Score: 232.3 bits (591), Expect = 1.5e-57 Identity = 113/119 (94.96%), Postives = 115/119 (96.64%), Query Frame = 0
BLAST of CaUC10G188330 vs. ExPASy TrEMBL
Match: A0A6J1FSJ7 (zinc finger SWIM domain-containing protein 7 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111447762 PE=4 SV=1) HSP 1 Score: 228.8 bits (582), Expect = 1.6e-56 Identity = 111/119 (93.28%), Postives = 114/119 (95.80%), Query Frame = 0
BLAST of CaUC10G188330 vs. ExPASy TrEMBL
Match: A0A6J1D5Z4 (zinc finger SWIM domain-containing protein 7 OS=Momordica charantia OX=3673 GN=LOC111017621 PE=4 SV=1) HSP 1 Score: 223.0 bits (567), Expect = 8.8e-55 Identity = 109/119 (91.60%), Postives = 113/119 (94.96%), Query Frame = 0
BLAST of CaUC10G188330 vs. TAIR 10
Match: AT4G33925.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 173.7 bits (439), Expect = 1.2e-43 Identity = 80/119 (67.23%), Postives = 100/119 (84.03%), Query Frame = 0
BLAST of CaUC10G188330 vs. TAIR 10
Match: AT4G33925.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; Has 106 Blast hits to 106 proteins in 53 species: Archae - 8; Bacteria - 0; Metazoa - 47; Fungi - 2; Plants - 36; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). ) HSP 1 Score: 173.7 bits (439), Expect = 1.2e-43 Identity = 80/122 (65.57%), Postives = 101/122 (82.79%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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