CaUC10G188110 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC10G188110
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionTrypsin inhibitor 5
LocationCiama_Chr10: 20197500 .. 20197787 (-)
RNA-Seq ExpressionCaUC10G188110
SyntenyCaUC10G188110
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAGCAAGAAAGTTGGTTTTATGGGGAAAGTGCTTATTATTATAGTGCTTTTGGGGACTTCAATTTCAGCGAACAACATGAAGGCAATGGAAGTTGAAGGGAATGAAATTAGGGTAGTGGACACTATCCAAACTATTGTCTTGCCAAGAAAAATGATGAAAGATGGACTTTTCCTATTTCAATTTGGAATATGTCCCCTCATTTATATGCCTTGTAAAAAGGACTCCGATTGCCTTCAACATTGTGCTTGCAACGACAATGGTATATGCGGTCCAATAGAATGA

mRNA sequence

ATGGAGAGCAAGAAAGTTGGTTTTATGGGGAAAGTGCTTATTATTATAGTGCTTTTGGGGACTTCAATTTCAGCGAACAACATGAAGGCAATGGAAGTTGAAGGGAATGAAATTAGGGTAGTGGACACTATCCAAACTATTGTCTTGCCAAGAAAAATGATGAAAGATGGACTTTTCCTATTTCAATTTGGAATATGTCCCCTCATTTATATGCCTTGTAAAAAGGACTCCGATTGCCTTCAACATTGTGCTTGCAACGACAATGGTATATGCGGTCCAATAGAATGA

Coding sequence (CDS)

ATGGAGAGCAAGAAAGTTGGTTTTATGGGGAAAGTGCTTATTATTATAGTGCTTTTGGGGACTTCAATTTCAGCGAACAACATGAAGGCAATGGAAGTTGAAGGGAATGAAATTAGGGTAGTGGACACTATCCAAACTATTGTCTTGCCAAGAAAAATGATGAAAGATGGACTTTTCCTATTTCAATTTGGAATATGTCCCCTCATTTATATGCCTTGTAAAAAGGACTCCGATTGCCTTCAACATTGTGCTTGCAACGACAATGGTATATGCGGTCCAATAGAATGA

Protein sequence

MESKKVGFMGKVLIIIVLLGTSISANNMKAMEVEGNEIRVVDTIQTIVLPRKMMKDGLFLFQFGICPLIYMPCKKDSDCLQHCACNDNGICGPIE
Homology
[Close]
BLAST of CaUC10G188110 vs. NCBI nr
Match: KAG6576919.1 (hypothetical protein SDJN03_24493, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 55.5 bits (132), Expect = 3.0e-04
Identity = 33/82 (40.24%), Postives = 48/82 (58.54%), Query Frame = 0 

Query: 13  LIIIVLLGTSISANNMKAMEVEGNEIRVVDTIQTI--VLPRKMMKDGLFLFQFGICPLIY 72
           LI I+L+ T  SA    A  ++ + + +V   + I   +PRK+MK G+   +  +CP I 
Sbjct: 64  LIAILLVATLSSA----AYAIDDDSMDLVFDGRDINHGVPRKIMKWGVLNHEERVCPKIL 123

Query: 73  MPCKKDSDCLQHCACNDNGICG 93
           M CKKDSDCL  C C ++G CG
Sbjct: 124 MECKKDSDCLAECICLEHGYCG 141

[Close]
BLAST of CaUC10G188110 vs. NCBI nr
Match: KAG7014944.1 (hypothetical protein SDJN02_22575, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 55.5 bits (132), Expect = 3.0e-04
Identity = 33/82 (40.24%), Postives = 48/82 (58.54%), Query Frame = 0 

Query: 13  LIIIVLLGTSISANNMKAMEVEGNEIRVVDTIQTI--VLPRKMMKDGLFLFQFGICPLIY 72
           LI I+L+ T  SA    A  ++ + + +V   + I   +PRK+MK G+   +  +CP I 
Sbjct: 64  LIAILLVATLSSA----AYAIDDDSMDLVFDGRDINHGVPRKIMKWGVLNHEERVCPKIL 123

Query: 73  MPCKKDSDCLQHCACNDNGICG 93
           M CKKDSDCL  C C ++G CG
Sbjct: 124 MECKKDSDCLAECICLEHGYCG 141

[Close]
BLAST of CaUC10G188110 vs. ExPASy Swiss-Prot
Match: P34950 (Trypsin inhibitor 5 OS=Luffa aegyptiaca OX=3670 PE=1 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 9.7e-06
Identity = 27/58 (46.55%), Postives = 31/58 (53.45%), Query Frame = 0 

Query: 40 VVDTIQTIV-----LPRKMMKDGLFLFQFGICPLIYMPCKKDSDCLQHCACNDNGICG 93
          VV+ I+ I      LPRK+M         GICP I MPCK D DC+  C C  NG CG
Sbjct: 10 VVEVIELISDGGNDLPRKIMSGR----HGGICPRILMPCKTDDDCMLDCRCLSNGYCG 63

[Close]
BLAST of CaUC10G188110 vs. ExPASy Swiss-Prot
Match: P35628 (Trypsin inhibitor 4 OS=Luffa aegyptiaca OX=3670 PE=1 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 6.3e-05
Identity = 18/28 (64.29%), Postives = 19/28 (67.86%), Query Frame = 0 

Query: 65 ICPLIYMPCKKDSDCLQHCACNDNGICG 93
          ICP I MPC  DSDCL  C C +NG CG
Sbjct: 1  ICPRILMPCSSDSDCLAECICLENGFCG 28

[Close]
BLAST of CaUC10G188110 vs. ExPASy Swiss-Prot
Match: P83397 (Trypsin inhibitor 6 OS=Cyclanthera pedata OX=198836 PE=1 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 6.3e-05
Identity = 18/28 (64.29%), Postives = 20/28 (71.43%), Query Frame = 0 

Query: 65 ICPLIYMPCKKDSDCLQHCACNDNGICG 93
          ICP I M CKKDSDCL  C C ++G CG
Sbjct: 3  ICPRILMKCKKDSDCLAECICEEHGFCG 30

[Close]
BLAST of CaUC10G188110 vs. ExPASy Swiss-Prot
Match: P83398 (Trypsin inhibitor 7 OS=Cyclanthera pedata OX=198836 PE=1 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 6.3e-05
Identity = 18/28 (64.29%), Postives = 20/28 (71.43%), Query Frame = 0 

Query: 65 ICPLIYMPCKKDSDCLQHCACNDNGICG 93
          ICP I M CKKDSDCL  C C ++G CG
Sbjct: 3  ICPRILMKCKKDSDCLAECICQEHGFCG 30

[Close]
BLAST of CaUC10G188110 vs. ExPASy Swiss-Prot
Match: P26771 (Trypsin inhibitor 1 OS=Lagenaria siceraria OX=3668 PE=1 SV=2)

HSP 1 Score: 47.8 bits (112), Expect = 8.2e-05
Identity = 18/27 (66.67%), Postives = 20/27 (74.07%), Query Frame = 0 

Query: 66 CPLIYMPCKKDSDCLQHCACNDNGICG 93
          CP IYM CK DSDCL  C C ++GICG
Sbjct: 4  CPRIYMECKHDSDCLADCVCLEHGICG 30

The following BLAST results are available for this feature:
BLAST of CaUC10G188110 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6576919.13.0e-0440.24hypothetical protein SDJN03_24493, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7014944.13.0e-0440.24hypothetical protein SDJN02_22575, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of CaUC10G188110 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P349509.7e-0646.55Trypsin inhibitor 5 OS=Luffa aegyptiaca OX=3670 PE=1 SV=1[more]
P356286.3e-0564.29Trypsin inhibitor 4 OS=Luffa aegyptiaca OX=3670 PE=1 SV=1[more]
P833976.3e-0564.29Trypsin inhibitor 6 OS=Cyclanthera pedata OX=198836 PE=1 SV=1[more]
P833986.3e-0564.29Trypsin inhibitor 7 OS=Cyclanthera pedata OX=198836 PE=1 SV=1[more]
P267718.2e-0566.67Trypsin inhibitor 1 OS=Lagenaria siceraria OX=3668 PE=1 SV=2[more]
BLAST of CaUC10G188110 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CaUC10G188110 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00286PTI_1coord: 64..92
e-value: 3.7E-8
score: 43.1
NoneNo IPR availableGENE3D4.10.75.20coord: 50..92
e-value: 6.8E-11
score: 43.8
IPR000737Proteinase inhibitor I7, squashPFAMPF00299Squashcoord: 65..92
e-value: 5.7E-12
score: 45.4
IPR000737Proteinase inhibitor I7, squashPROSITEPS00286SQUASH_INHIBITORcoord: 66..85
IPR000737Proteinase inhibitor I7, squashCDDcd00150PlantTIcoord: 66..92
e-value: 1.65797E-8
score: 44.2907
IPR011052Proteinase/amylase inhibitor domain superfamilySUPERFAMILY57027Plant inhibitors of proteinases and amylasescoord: 63..92

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC10G188110.1CaUC10G188110.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0004867 serine-type endopeptidase inhibitor activity
molecular_function GO:0004866 endopeptidase inhibitor activity