CaUC10G187280 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC10G187280
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	30S ribosomal protein S11
Location	Ciama_Chr10: 17741971 .. 17746690 (+)
RNA-Seq Expression	CaUC10G187280
Synteny	CaUC10G187280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGTCCACCAAGACCTGGGGTTCCCACACTTACTCAAATTTCTACTCACAAAGCTCCACTATGCGTGTGGTTTCTTCCCAAATCTCTTTGGTATGCGTCCACTTCCTTCCTCCCTAGGGCCCATGCGTTTTGGACTCCTTACATGACCTCATGGGCTCCTTGGTTGCTCATTCATGCGTCCATGGGGTGTTTCCCGAGGCTATGCTTCCAACTTTTCTATTCTATGCCTCCCATACTTAGCTCATTTTTCCGACAATCCATCAACTATGCGTCCAACCCCTACTTTTCCTTCTTTAGGGTTGCTTCTCAACTCTCCAAATCATCCAAGACTTGACCAAATCCTCTTTGAGGAAGGGCCTATGCGTTTACCCTAGGTAGAATGGGGTTTTTCCTTCAACTTTGCCCTATGCGTTTAACCTTCTTTTCCAAGACCTAGGTTTTCTTTTCAACACTTCAACACTTAACCAAATTTCTTCCATGATAGTCCATCATGCATTCACCACTTCAACCATGCGTCCAATATAGTGATTTTTCCTCCAAGGATATGTCCAACTCACAACTAGTTTCAACTATGCTTTCAACTCTTCCTTCTTTAACAATTAATGAAATTCCTCTTTTATCCTTAGGCTATGCGTCCAAGCCTATCCATTTTTCATTTTCATAGTTGAGTTTTAATGCCTAGTTGTGACACTTAGAAGAAATCCTTAGCTCATCGGTCACCTTGTGGTCTAAGACTCGAAAATTGCTTAACATGATTTTCTTCCAAACTCACTTATGACTTATTCTCAACCCAAAACTCAAGTTGGCACAAACTCATTTTCCTCCTCCTTATGTCCCAAAGCATAGGGTCCTTAAATTGGCCAAAATTTGGCTAACTCCACAAACCTAGATTTTTTTGCCTCAAAATTTTTCTAACTCCACATGCTTCTGATCCAAGTTTTTACATCCTTTACCCCAGTTTCCTTTCTTTATGTGTCTTAAGCAACTAGGTCAAAGAATAGAGTGTCACAATCCTACTCACCTTAGAGAAATTTCATCCTCAAATTTAAGGTAGAGACTTACCACTGAGATAAAGGGAAAGAACTTTTATTCATTAAGCTTAACTGTACAATACATTCATATTTAGAAAACAAACAAACATAAATAACAACCAAAACTAAATTTATTCTTTCTTCTTCCTCTTTTCTTCCATTTTCCTTCTCTTCTTCTCAAATTCTTCCTCCTTCCACCTCTAGTCGTAAGGGCCTCCGTTGGTGCGAGGACAATCTTTACAATAGTGACCAGGTCTTTCACACATGTAATAGACGCCGCCCCTTCCTTCCCTATTGGCCCTGCGGCGACGCCCACAGTTTAAACAAGGGAATTCTACTGTCTTAGCCCTTGAACTCTCCTTAAGGCCCTTCTGCTGCTGGCAGAAATCAATGAATACAACGCATCGTATTCCGTTGTGTCTCTCGAGTCCATAGGTGTAGCATTTTCATGTCCCCTTTAAACACTTTCCATATGGATTGTCCCTCGAGTCCACACACACGCGCGCACACACACACACAAAATCAATATTTTCCAACTTAAAATCAATTCCACAATAACTTATCCACAACTTTAAATTTCCAACTCATCTTAATTTAACCAAATTCTTAAATCACACTCCATTTGAATTCTTCAAATTAAAACCAACTTCTAACATTCTCAAAAAATAAATCCAATTTTCCACCAACTGAATTAGATCAAAAGAGTTTATCACGTTTAGCTTAAATTGAATTATTTTCTCAACATAATCCAATTAAGAATTCTGGAGATGAGGGATTGAACGTGGTTAATAAAGGGTGGTCTAATGGATTAGATGGCAATGAAGTTCCAATATTTTCTCCTCAATAATTAGTTAACGAAGTGTGTGCTAATCAACTAATGGAGGGGAGAAGAGAACTAGAAGAAGAATATGATTTGAGAGAATTGAAAAAAAGCTGGATAAAGGTTTGATGGCAGAAGAAATGCAACTGCTTAACCAAGGGGCATCAGTGAGGGAGTTTAACATGCTTATCCTTAATAATTACTAACATCTTTACTTTTTCTCTTTATTTTACTGTTTTCTTAAGCAAAAAAAAAAAAAATCAATGCTTTCACTCTCTTCCTAAAATTTACTCAACAAGCCGGCGAATCCAATTACGGAACTCTTCCCACCAAACCTACAAACTAAATTAAGACACTAATCCAATCAAGACTACTTCTAATTTGTTTTACTAAATTACTTTTAATTGTTCTTTTAAAAAATTATTTTTAATTGTGTAAAACATAACCACTTTGTAAATTAATTAAACTTGGATTATAGATTAGAAGATTGTTTTTCAAAAATAGAAAAATTGTTAAAAATAACTACAAATATAAAAAATTTACTTTCTATTTATGACAAACCACTTAAATAAACATCTATCACTTTATCAAATACACTAAATTTTAGTGTATTTATAAATAGTTTTATATTTATAATGTAGATTAAATTTGTAATTTTAGAAAATAAAAATTAATATACACATTTGAAGAAAGTGGGGGATCCCTGTGTCTCATCCTCCACCAGGGAGGAATAAAGTTTAGGGTTTTCTTTTCGGCACTTCTTATTCACAGAACCACCGCCTGCGGCCGTCCGACGACGATGCCGAAACTTTCCCTCTCTCACCTCTCTTCTCTCTTCCAGTCGTCCTCTCTCCGTCATGGCCCTTCCTTTTCTCCCTCTCGCCTCTCTATTTCTCCATTCATTGGCTCAGATTTGCGTTCTTTCATGTCCTCCCTCCACCGATCAGATCTCACTGGATCCGTTCAACTAGACAGCCGGGTCTCAGGTTAATTATATTCCCTATTTTCTATCTGATACGAGAAATGACAATTCGAATTTATGGAGTGTTTTTCTTTAGTGATGAATATTTTGCGGATTTCAGGGTGTCTCGGCATTTCGCAAGGTGATTCTGCGAATGTTGGTCGGGAGATTGTTGGACGTGGTTGGAAAGCCTTGGGAGCTCAGGGTTCTTGTTGGGGTTTGGCGCGTTCAAATGAAAGTGTCTCCGTTCCTTATTCTATTAGCTCTAGATGTTATGGACAGTACAATAACTGGCCAAATGCAGATACAGGAAGAAATCTTAAGTCTATGAGTTTTGTTAAGGGAATTTTAGAGGAAGATGGAAGAGATTTTACAGGTAGTTCTCGGTTCCCTAGACCACCCAATATGGAACACAATGCTGATATTGTTCATGTAAAGCTGATGCGTAACAATACATTTATCACTGTTACGGATTACAAGGGAAATACAAAGCTCAAGGCCTCTGCTGGTCGTCTTGAAGAACTTAAAGGAGGGCCTAAACTCTCCCGTTATGCTGGTCAAGCAATTGCAGAATATGTTGGTCGTGAATCTAGAAAATTGGGGCTAAAATCAGTTGTGATGAGGGTGAAAGGCTTTACTTTTTTTAAGAAGAAAAGGCAGGCAATCATGAGTTGGAGAGATGGATTTACTGATTCTAGAAGTGATCGAAATCCGATTGTCTACATTGAAGATACCACAAGACGTGCTCACAATGGTTGCCGACTCCCAAAGCAACGCCGTGTCTAGATGTATGGTGCTAGATCTTTGCTAATACAACAGCAAATTGGTGATGAGGTCTTTCTTTTATCTTTGTTGGCTTGGTTCGAATTGATGTAGCTTGCCTTCGAGTTTTTACTTGCTTATTTCCATAACGATGACAATTGGGATGTTTCCATATGCATCATTGTAAAATTTTCCTGGTTTAAATTGATGTAGCTTGCCTTCAGGTTCTTACTTGCTTATTGCAATAATAATAACAATATGATGGTTTTCTATATACATCAGTGTAAAACAATTGCTATTTAGTTAGTACCATTTGGACTTCACAATAGAACGATATCAAGAATTCAAGTGGCCCATTTTCCAAACTTGTTACTTGGAAGTTTATTATCTTCTGTTACACTCCAGAATCTGTTGTGAATTACACATTTCTTGGATCTTACTTCTGTGCTTCTCAGTTCTCTATCTGATTCCCCTGCTTGGGAATCTTGTTTTAACTTTTGCATAAAAGATTTTAGTTTCTAATTGTGACACGATGCCAACCGTATGAAGACAACGAAAGGCGGCTCCTACTGGTTTAATTAACTACAGGACAGAGAGAGATATTACAGTGAATTGACCATTGTTTTTGTGTCTGAAGTTTTTATGTAGATTTGCAGGCTTTTTGATAGTTGATGCTGGATTTATACCCTGGATCTGGACCATCAGCATGGATGACCAAATGGGCACAGCATGGAGATTAAGAATTGTTTGGTAACAGGAAATTTTACCAAATGTTCTAGAACCAGAAAGCCTCCATGGATTGTTGGTAGAGGAAGGTGTTCCATACAGTTCTGAATAGAAGGATGGAGAAATAAAGCTACTCAGGCTGATAAATCGGTATGCTATCTACAATTTTGTTCCTTAGTATGATGGCTCATTTGAAGTTGCTTGGTGCGCCCATGTTTTCTTGCTAAATCTTTTCTGAGGATGTAATTTGTCGCTGTCTCAGCACATCTTTCTCCTTTACGTTTTGGAGGTACTTGCATTAACTGATATGAAACTGAATGATGTTAATTAATAGGACTAACACGAATTTGTCACTTTCTAATGTTTGATTATCGTACTCGTTTTCTATGTGTATTTATTAATGTGCGAGTTTAGCAAA

mRNA sequence

ATGCGTCCACCAAGACCTGGGGTTCCCACACTTACTCAAATTTCTACTCACAAAGCTCCACTATGCGTGTGGTTTCTTCCCAAATCTCTTTGAACCACCGCCTGCGGCCGTCCGACGACGATGCCGAAACTTTCCCTCTCTCACCTCTCTTCTCTCTTCCAGTCGTCCTCTCTCCGTCATGGCCCTTCCTTTTCTCCCTCTCGCCTCTCTATTTCTCCATTCATTGGCTCAGATTTGCGTTCTTTCATGTCCTCCCTCCACCGATCAGATCTCACTGGATCCGTTCAACTAGACAGCCGGGTCTCAGGGTGTCTCGGCATTTCGCAAGGTGATTCTGCGAATGTTGGTCGGGAGATTGTTGGACGTGGTTGGAAAGCCTTGGGAGCTCAGGGTTCTTGTTGGGGTTTGGCGCGTTCAAATGAAAGTGTCTCCGTTCCTTATTCTATTAGCTCTAGATGTTATGGACAGTACAATAACTGGCCAAATGCAGATACAGGAAGAAATCTTAAGTCTATGAGTTTTGTTAAGGGAATTTTAGAGGAAGATGGAAGAGATTTTACAGGTAGTTCTCGGTTCCCTAGACCACCCAATATGGAACACAATGCTGATATTGTTCATGTAAAGCTGATGCGTAACAATACATTTATCACTGTTACGGATTACAAGGGAAATACAAAGCTCAAGGCCTCTGCTGGTCGTCTTGAAGAACTTAAAGGAGGGCCTAAACTCTCCCGTTATGCTGGTCAAGCAATTGCAGAATATGTTGGTCGTGAATCTAGAAAATTGGGGCTAAAATCAGTTGTGATGAGGGTGAAAGGCTTTACTTTTTTTAAGAAGAAAAGGCAGGCAATCATGAGTTGGAGAGATGGATTTACTGATTCTAGAAGTGATCGAAATCCGATTGTCTACATTGAAGATACCACAAGACGTGCTCACAATGGTTGCCGACTCCCAAAGCAACGCCGTGTCTAGATGTATGGTGCTAGATCTTTGCTAATACAACAGCAAATTGGTGATGAGGCTTTTTGATAGTTGATGCTGGATTTATACCCTGGATCTGGACCATCAGCATGGATGACCAAATGGGCACAGCATGGAGATTAAGAATTGTTTGGTAACAGGAAATTTTACCAAATGTTCTAGAACCAGAAAGCCTCCATGGATTGTTGGTAGAGGAAGGTGTTCCATACAGTTCTGAATAGAAGGATGGAGAAATAAAGCTACTCAGGCTGATAAATCGGTATGCTATCTACAATTTTGTTCCTTAGTATGATGGCTCATTTGAAGTTGCTTGGTGCGCCCATGTTTTCTTGCTAAATCTTTTCTGAGGATGTAATTTGTCGCTGTCTCAGCACATCTTTCTCCTTTACGTTTTGGAGGTACTTGCATTAACTGATATGAAACTGAATGATGTTAATTAATAGGACTAACACGAATTTGTCACTTTCTAATGTTTGATTATCGTACTCGTTTTCTATGTGTATTTATTAATGTGCGAGTTTAGCAAA

Coding sequence (CDS)

ATGCCGAAACTTTCCCTCTCTCACCTCTCTTCTCTCTTCCAGTCGTCCTCTCTCCGTCATGGCCCTTCCTTTTCTCCCTCTCGCCTCTCTATTTCTCCATTCATTGGCTCAGATTTGCGTTCTTTCATGTCCTCCCTCCACCGATCAGATCTCACTGGATCCGTTCAACTAGACAGCCGGGTCTCAGGGTGTCTCGGCATTTCGCAAGGTGATTCTGCGAATGTTGGTCGGGAGATTGTTGGACGTGGTTGGAAAGCCTTGGGAGCTCAGGGTTCTTGTTGGGGTTTGGCGCGTTCAAATGAAAGTGTCTCCGTTCCTTATTCTATTAGCTCTAGATGTTATGGACAGTACAATAACTGGCCAAATGCAGATACAGGAAGAAATCTTAAGTCTATGAGTTTTGTTAAGGGAATTTTAGAGGAAGATGGAAGAGATTTTACAGGTAGTTCTCGGTTCCCTAGACCACCCAATATGGAACACAATGCTGATATTGTTCATGTAAAGCTGATGCGTAACAATACATTTATCACTGTTACGGATTACAAGGGAAATACAAAGCTCAAGGCCTCTGCTGGTCGTCTTGAAGAACTTAAAGGAGGGCCTAAACTCTCCCGTTATGCTGGTCAAGCAATTGCAGAATATGTTGGTCGTGAATCTAGAAAATTGGGGCTAAAATCAGTTGTGATGAGGGTGAAAGGCTTTACTTTTTTTAAGAAGAAAAGGCAGGCAATCATGAGTTGGAGAGATGGATTTACTGATTCTAGAAGTGATCGAAATCCGATTGTCTACATTGAAGATACCACAAGACGTGCTCACAATGGTTGCCGACTCCCAAAGCAACGCCGTGTCTAG

Protein sequence

MPKLSLSHLSSLFQSSSLRHGPSFSPSRLSISPFIGSDLRSFMSSLHRSDLTGSVQLDSRVSGCLGISQGDSANVGREIVGRGWKALGAQGSCWGLARSNESVSVPYSISSRCYGQYNNWPNADTGRNLKSMSFVKGILEEDGRDFTGSSRFPRPPNMEHNADIVHVKLMRNNTFITVTDYKGNTKLKASAGRLEELKGGPKLSRYAGQAIAEYVGRESRKLGLKSVVMRVKGFTFFKKKRQAIMSWRDGFTDSRSDRNPIVYIEDTTRRAHNGCRLPKQRRV

Homology

[Close]

BLAST of CaUC10G187280 vs. NCBI nr
Match: XP_038903066.1 (probable ribosomal protein S11, mitochondrial [Benincasa hispida])

HSP 1 Score: 478.4 bits (1230), Expect = 4.3e-131
Identity = 241/283 (85.16%), Postives = 260/283 (91.87%), Query Frame = 0


Query: 1   MPKLSLSHLSSLFQSSSLRHGPSFSPSRLSISPFIGSDLRSFMSSLHRSDLTGSVQLDSR 60
           MPKLSLSHL SLF+SSSLRHGPSFSPSRLSISPFIGSD RS MSS+HRSDLTGS++LD++
Sbjct: 1   MPKLSLSHLYSLFRSSSLRHGPSFSPSRLSISPFIGSDSRSSMSSIHRSDLTGSIRLDNQ 60

Query: 61  VSGCLGISQGDSANVGREIVGRGWKALGAQGSCWGLARSNESVSVPYSISSRCYGQYNNW 120
           +SGCL +SQGDSANVGREIVGRGWK+ GAQGSCW L RS+E VSV +S S RCYGQY+N 
Sbjct: 61  LSGCLDLSQGDSANVGREIVGRGWKSTGAQGSCWSLGRSSECVSVSHSTSYRCYGQYDNR 120

Query: 121 PNADTGRNLKSMSFVKGILEEDGRDFTGSSRFPRPPNMEHNADIVHVKLMRNNTFITVTD 180
           PNADTGRNL SMSFV+  LEE GR FTGSSRF R PNMEHNADIVHVKL+RNNTFITVTD
Sbjct: 121 PNADTGRNLNSMSFVRDTLEEGGRYFTGSSRFFRQPNMEHNADIVHVKLLRNNTFITVTD 180

Query: 181 YKGNTKLKASAGRLEELKGGPKLSRYAGQAIAEYVGRESRKLGLKSVVMRVKGFTFFKKK 240
            KGNTKLKASAGRLEELKGGPKLSRYA +A+AEYVGRESRKLGLKSVVMRVKGFT FK+K
Sbjct: 181 NKGNTKLKASAGRLEELKGGPKLSRYAAEAVAEYVGRESRKLGLKSVVMRVKGFTIFKRK 240

Query: 241 RQAIMSWRDGFTDSRSDRNPIVYIEDTTRRAHNGCRLPKQRRV 284
           RQAI+SWR GFTDSRSD+NPIVYIEDTTRRAHNGCRLPKQRRV
Sbjct: 241 RQAIISWRAGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV 283

[Close]

BLAST of CaUC10G187280 vs. NCBI nr
Match: XP_022999735.1 (probable ribosomal protein S11, mitochondrial [Cucurbita maxima])

HSP 1 Score: 456.8 bits (1174), Expect = 1.3e-124
Identity = 233/286 (81.47%), Postives = 254/286 (88.81%), Query Frame = 0


Query: 1   MPKLSLSHLSSLFQSSSLRHGPSFSPSRLSISPFIGSDLRSFMSSLHR---SDLTGSVQL 60
           M +L L HLSSLF+SSSL HG SFS SR+SISPF G+D RS M SLH    SDL+GSVQL
Sbjct: 1   MRRLPLPHLSSLFRSSSLSHGSSFSSSRVSISPFFGTDGRSPMFSLHSSHGSDLSGSVQL 60

Query: 61  DSRVSGCLGISQGDSANVGREIVGRGWKALGAQGSCWGLARSNESVSVPYSISSRCYGQY 120
           D + SGC+ + +GDS NVGREIVGR WKALGAQG CWGLARS+E+VSVPYS SSRCY  Y
Sbjct: 61  DRQDSGCVDLPRGDSVNVGREIVGRAWKALGAQGPCWGLARSSENVSVPYSSSSRCYVHY 120

Query: 121 NNWPNADTGRNLKSMSFVKGILEEDGRDFTGSSRFPRPPNMEHNADIVHVKLMRNNTFIT 180
           +  PNADTGRN KSM+FV+GILEEDG +F GSS+FPRPPNMEHNADIVHVKLMRNNTFIT
Sbjct: 121 DGPPNADTGRNFKSMNFVRGILEEDGMNFMGSSQFPRPPNMEHNADIVHVKLMRNNTFIT 180

Query: 181 VTDYKGNTKLKASAGRLEELKGGPKLSRYAGQAIAEYVGRESRKLGLKSVVMRVKGFTFF 240
           VTD KGNTKLKASAGRLEELKGGPKLSRYA +A AEYVGRESRKLGLKSVVMRVKGFT+F
Sbjct: 181 VTDNKGNTKLKASAGRLEELKGGPKLSRYAAEATAEYVGRESRKLGLKSVVMRVKGFTYF 240

Query: 241 KKKRQAIMSWRDGFTDSRSDRNPIVYIEDTTRRAHNGCRLPKQRRV 284
           KKK+QAI+SWRDGFTDSRSD+NPIVYIEDTTRRAHNGCRLPKQRRV
Sbjct: 241 KKKKQAILSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV 286

[Close]

BLAST of CaUC10G187280 vs. NCBI nr
Match: XP_022942058.1 (probable ribosomal protein S11, mitochondrial [Cucurbita moschata])

HSP 1 Score: 454.5 bits (1168), Expect = 6.6e-124
Identity = 229/286 (80.07%), Postives = 253/286 (88.46%), Query Frame = 0


Query: 1   MPKLSLSHLSSLFQSSSLRHGPSFSPSRLSISPFIGSDLRSFMSSL---HRSDLTGSVQL 60
           M +L   HLSSLF+SSSL HG SFS SRLSISPF G+D RS MSSL   H S+++GSVQL
Sbjct: 1   MRRLPFPHLSSLFRSSSLSHGSSFSSSRLSISPFFGTDARSPMSSLHFSHGSEISGSVQL 60

Query: 61  DSRVSGCLGISQGDSANVGREIVGRGWKALGAQGSCWGLARSNESVSVPYSISSRCYGQY 120
           D + SGC+ + +GDS NVGREIVGR WKALGAQG CWGLARS+E+VSVPYS SSRCY  Y
Sbjct: 61  DRQDSGCVNLPRGDSVNVGREIVGRAWKALGAQGPCWGLARSSENVSVPYSSSSRCYVHY 120

Query: 121 NNWPNADTGRNLKSMSFVKGILEEDGRDFTGSSRFPRPPNMEHNADIVHVKLMRNNTFIT 180
           +  PNADTGRN KSM+FV+GILEEDG DF GSS+FPRPPNMEHNADIVHVKLMRNNTFIT
Sbjct: 121 DGRPNADTGRNFKSMNFVRGILEEDGMDFMGSSQFPRPPNMEHNADIVHVKLMRNNTFIT 180

Query: 181 VTDYKGNTKLKASAGRLEELKGGPKLSRYAGQAIAEYVGRESRKLGLKSVVMRVKGFTFF 240
           VTD KGNTKLKAS+GRLEELKGGPKLSRYA +A AEYVGRES+KLGLKSVVMRVKGFT+F
Sbjct: 181 VTDNKGNTKLKASSGRLEELKGGPKLSRYAAEATAEYVGRESKKLGLKSVVMRVKGFTYF 240

Query: 241 KKKRQAIMSWRDGFTDSRSDRNPIVYIEDTTRRAHNGCRLPKQRRV 284
           KKK+QAI+SWRDGFTDS+ D+NPIVYIEDTTRRAHNGCRLPKQRRV
Sbjct: 241 KKKKQAILSWRDGFTDSKRDQNPIVYIEDTTRRAHNGCRLPKQRRV 286

[Close]

BLAST of CaUC10G187280 vs. NCBI nr
Match: KAG7030891.1 (putative ribosomal protein S11, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 452.2 bits (1162), Expect = 3.3e-123
Identity = 228/286 (79.72%), Postives = 252/286 (88.11%), Query Frame = 0


Query: 1   MPKLSLSHLSSLFQSSSLRHGPSFSPSRLSISPFIGSDLRSFMSSL---HRSDLTGSVQL 60
           M +L   HLSSLF+SSSL HG SFS  RLSISPF G+D RS MSSL   H S+++GSVQL
Sbjct: 1   MRRLPFPHLSSLFRSSSLSHGSSFSSCRLSISPFFGTDARSPMSSLHFSHGSEISGSVQL 60

Query: 61  DSRVSGCLGISQGDSANVGREIVGRGWKALGAQGSCWGLARSNESVSVPYSISSRCYGQY 120
           D + SGC+ + +GDS NVGREIVGR WKALGAQG CWGLARS+E+VSVPYS SSRCY  Y
Sbjct: 61  DRQDSGCVDLPRGDSVNVGREIVGRAWKALGAQGPCWGLARSSENVSVPYSSSSRCYVHY 120

Query: 121 NNWPNADTGRNLKSMSFVKGILEEDGRDFTGSSRFPRPPNMEHNADIVHVKLMRNNTFIT 180
           +  PNADTGRN KSM+FV+GILEEDG DF GSS+FPRPPNMEHNADIVHVKLMRNNTFIT
Sbjct: 121 DGRPNADTGRNFKSMNFVRGILEEDGMDFMGSSQFPRPPNMEHNADIVHVKLMRNNTFIT 180

Query: 181 VTDYKGNTKLKASAGRLEELKGGPKLSRYAGQAIAEYVGRESRKLGLKSVVMRVKGFTFF 240
           VTD KGNTKLKAS+GRLEELKGGPKLSRYA +A AEYVGRES+KLGLKSVVMRVKGFT+F
Sbjct: 181 VTDNKGNTKLKASSGRLEELKGGPKLSRYAAEATAEYVGRESKKLGLKSVVMRVKGFTYF 240

Query: 241 KKKRQAIMSWRDGFTDSRSDRNPIVYIEDTTRRAHNGCRLPKQRRV 284
           KKK+QAI+SWRDGFTDS+ D+NPIVYIEDTTRRAHNGCRLPKQRRV
Sbjct: 241 KKKKQAILSWRDGFTDSKRDQNPIVYIEDTTRRAHNGCRLPKQRRV 286

[Close]

BLAST of CaUC10G187280 vs. NCBI nr
Match: XP_023526167.1 (probable ribosomal protein S11, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 445.3 bits (1144), Expect = 4.0e-121
Identity = 226/286 (79.02%), Postives = 251/286 (87.76%), Query Frame = 0


Query: 1   MPKLSLSHLSSLFQSSSLRHGPSFSPSRLSISPFIGSDLRSFMSSLH---RSDLTGSVQL 60
           M +L L HLSSLF+SSSL HG SFS SRLSISPF G+D RS MSSLH    S+++GSVQ+
Sbjct: 1   MRRLPLPHLSSLFRSSSLSHGSSFSSSRLSISPFFGTDARSPMSSLHFSRGSEISGSVQI 60

Query: 61  DSRVSGCLGISQGDSANVGREIVGRGWKALGAQGSCWGLARSNESVSVPYSISSRCYGQY 120
           D + SGC+ + +GDS NVGREIVGR  K LGAQG CWGLARS+E+VSVPYS SSRCY  Y
Sbjct: 61  DRQDSGCVDLPRGDSVNVGREIVGRAGKGLGAQGPCWGLARSSENVSVPYSSSSRCYVHY 120

Query: 121 NNWPNADTGRNLKSMSFVKGILEEDGRDFTGSSRFPRPPNMEHNADIVHVKLMRNNTFIT 180
           +  PNADTGRN KSM+FV+GILEED  DF GSS+FPRPPNMEHNADIVHVKLMRNNTFIT
Sbjct: 121 DGRPNADTGRNFKSMNFVRGILEEDRMDFMGSSQFPRPPNMEHNADIVHVKLMRNNTFIT 180

Query: 181 VTDYKGNTKLKASAGRLEELKGGPKLSRYAGQAIAEYVGRESRKLGLKSVVMRVKGFTFF 240
           VTD KGNTKLKAS+GRLEELKGGPKLSRYA +A AEYVGRES+KLGLKSVVMRVKGFT+F
Sbjct: 181 VTDNKGNTKLKASSGRLEELKGGPKLSRYAAEATAEYVGRESKKLGLKSVVMRVKGFTYF 240

Query: 241 KKKRQAIMSWRDGFTDSRSDRNPIVYIEDTTRRAHNGCRLPKQRRV 284
           KKK+QAI+SWRDGFTDS+ D+NPIVYIEDTTRRAHNGCRLPKQRRV
Sbjct: 241 KKKKQAILSWRDGFTDSKRDQNPIVYIEDTTRRAHNGCRLPKQRRV 286

[Close]

BLAST of CaUC10G187280 vs. ExPASy Swiss-Prot
Match: Q8VZT8 (Probable ribosomal protein S11, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NFD3 PE=1 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 2.5e-49
Identity = 91/162 (56.17%), Postives = 127/162 (78.40%), Query Frame = 0


Query: 122 NADTGRNLKSMSFVKGILEEDGRDFTGSSRFPRPPNMEHNADIVHVKLMRNNTFITVTDY 181
           N+ +G     + FV+ ++E++GR   G     + PN+E NADI+H+K++RNNTF+TVTD 
Sbjct: 153 NSRSGGKSSDLDFVREVIEDEGRRTAGIFSHFQRPNLETNADIIHIKMLRNNTFVTVTDS 212

Query: 182 KGNTKLKASAGRLEELKGGPKLSRYAGQAIAEYVGRESRKLGLKSVVMRVKGFTFFKKKR 241
           KGN K KA++G L +LKGG K++ Y   A AE +GR ++ +GLKSVV++V GFT F KK+
Sbjct: 213 KGNVKCKATSGSLPDLKGGRKMTNYTADATAENIGRRAKAMGLKSVVVKVNGFTHFGKKK 272

Query: 242 QAIMSWRDGFTDSRSDRNPIVYIEDTTRRAHNGCRLPKQRRV 284
           +AI+++RDGFT+SRSD+NPIVYIEDTTR+AHNGCRLP++RRV
Sbjct: 273 KAIIAFRDGFTNSRSDQNPIVYIEDTTRKAHNGCRLPRKRRV 314

[Close]

BLAST of CaUC10G187280 vs. ExPASy Swiss-Prot
Match: P26870 (Ribosomal protein S11, mitochondrial OS=Marchantia polymorpha OX=3197 GN=RPS11 PE=3 SV=2)

HSP 1 Score: 72.4 bits (176), Expect = 9.2e-12
Identity = 47/127 (37.01%), Postives = 65/127 (51.18%), Query Frame = 0


Query: 157 NMEHNADIVHVKLMRNNTFITVTDYKGNTKLKASAGRLEELKGGPKLSRYAGQAIAEYVG 216
           NM+    I +++    NT IT+TDY GNTK  +S+G +   KG  + + YA QA AE   
Sbjct: 9   NMQKKHCITYIQSTFGNTIITLTDYNGNTKTWSSSGSV-GFKGSRRSTNYAAQATAENAA 68

Query: 217 RESRKLGLKSVVMRVKGFTFFKKKRQAIMSWRDGFTDSRSDRNPIVYIEDTTRRAHNGCR 276
           R + +LG K V +R+KG  + K+               +     I  I D T   HNGCR
Sbjct: 69  RVAIQLGFKFVEVRIKGLGYGKE---------SSLRGLKLGGLIITKIRDVTPTPHNGCR 125

Query: 277 LPKQRRV 284
            PK+RRV
Sbjct: 129 PPKKRRV 125

[Close]

BLAST of CaUC10G187280 vs. ExPASy Swiss-Prot
Match: P46746 (Ribosomal protein S11, mitochondrial OS=Prototheca wickerhamii OX=3111 GN=RPS11 PE=3 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 2.1e-11
Identity = 44/126 (34.92%), Postives = 67/126 (53.17%), Query Frame = 0


Query: 158 MEHNADIVHVKLMRNNTFITVTDYKGNTKLKASAGRLEELKGGPKLSRYAGQAIAEYVGR 217
           +E  + IVH++   NNT IT+TD +GNT+   SAG L   K   K + YA  A AE +  
Sbjct: 13  IEKKSGIVHIQSTTNNTLITLTDLEGNTQFFVSAGTL-GFKNSRKSTVYASGAAAEALAS 72

Query: 218 ESRKLGLKSVVMRVKGFTFFKKKRQAIMSWRDGFTDSRSDRNPIVYIEDTTRRAHNGCRL 277
           ++   G +++++++KG  + KK               +     I  I++ T  AHNGCR 
Sbjct: 73  KAFNEGYRTIIVKIKGLGYGKK---------SAIRGLQKSNLVIKQIQEVTPIAHNGCRP 128

Query: 278 PKQRRV 284
           PK+RRV
Sbjct: 133 PKKRRV 128

[Close]

BLAST of CaUC10G187280 vs. ExPASy Swiss-Prot
Match: Q0BYD7 (30S ribosomal protein S11 OS=Hyphomonas neptunium (strain ATCC 15444) OX=228405 GN=rpsK PE=3 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.7e-10
Identity = 47/135 (34.81%), Postives = 71/135 (52.59%), Query Frame = 0


Query: 149 SSRFPRPPNMEHNADIVHVKLMRNNTFITVTDYKGNTKLKASAGRLEELKGGPKLSRYAG 208
           ++R  R       + IVHV    NNT +T+TD +GNT   +S+G +   KG  K + YA 
Sbjct: 5   ATRIRRRERKNITSGIVHVNSSFNNTMVTITDAQGNTISWSSSG-VMNFKGSRKSTPYAA 64

Query: 209 QAIAEYVGRESRKLGLKSVVMRVKGFTFFKKKRQAIMSWRDGFTDSRSDRNPIVYIEDTT 268
           Q  AE   +++++ GL++V +RV+G    ++     +    G T        +  I DTT
Sbjct: 65  QMAAEDAAKKAKEHGLQTVEVRVRGPGSGRESALRALQ-AAGLT--------VTAINDTT 124

Query: 269 RRAHNGCRLPKQRRV 284
              HNGCR PK+RRV
Sbjct: 125 PIPHNGCRPPKRRRV 129

[Close]

BLAST of CaUC10G187280 vs. ExPASy Swiss-Prot
Match: A5D5E6 (30S ribosomal protein S11 OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) OX=370438 GN=rpsK PE=3 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.7e-10
Identity = 47/120 (39.17%), Postives = 65/120 (54.17%), Query Frame = 0


Query: 164 IVHVKLMRNNTFITVTDYKGNTKLKASAGRLEELKGGPKLSRYAGQAIAEYVGRESRKLG 223
           + H+K   NNT +T+TD KGNT   +SAG++   KG  K + +A Q  AE   RE+ + G
Sbjct: 20  VAHIKSTFNNTIVTITDTKGNTISWSSAGQV-GFKGSRKSTPFAAQMAAESAAREAMEHG 79

Query: 224 LKSVVMRVKGFTFFKKKRQAIMSWRDGFTDSRSDRNPIVYIEDTTRRAHNGCRLPKQRRV 283
           LK V + VKG      +  AI S +    +       +  I+D T   HNGCR PK+RRV
Sbjct: 80  LKEVEVMVKGPG--AGREAAIRSLQAAGLE-------VNLIKDVTPIPHNGCRPPKRRRV 129

[Close]

BLAST of CaUC10G187280 vs. ExPASy TrEMBL
Match: A0A6J1KGF8 (probable ribosomal protein S11, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111493991 PE=3 SV=1)

HSP 1 Score: 456.8 bits (1174), Expect = 6.4e-125
Identity = 233/286 (81.47%), Postives = 254/286 (88.81%), Query Frame = 0


Query: 1   MPKLSLSHLSSLFQSSSLRHGPSFSPSRLSISPFIGSDLRSFMSSLHR---SDLTGSVQL 60
           M +L L HLSSLF+SSSL HG SFS SR+SISPF G+D RS M SLH    SDL+GSVQL
Sbjct: 1   MRRLPLPHLSSLFRSSSLSHGSSFSSSRVSISPFFGTDGRSPMFSLHSSHGSDLSGSVQL 60

Query: 61  DSRVSGCLGISQGDSANVGREIVGRGWKALGAQGSCWGLARSNESVSVPYSISSRCYGQY 120
           D + SGC+ + +GDS NVGREIVGR WKALGAQG CWGLARS+E+VSVPYS SSRCY  Y
Sbjct: 61  DRQDSGCVDLPRGDSVNVGREIVGRAWKALGAQGPCWGLARSSENVSVPYSSSSRCYVHY 120

Query: 121 NNWPNADTGRNLKSMSFVKGILEEDGRDFTGSSRFPRPPNMEHNADIVHVKLMRNNTFIT 180
           +  PNADTGRN KSM+FV+GILEEDG +F GSS+FPRPPNMEHNADIVHVKLMRNNTFIT
Sbjct: 121 DGPPNADTGRNFKSMNFVRGILEEDGMNFMGSSQFPRPPNMEHNADIVHVKLMRNNTFIT 180

Query: 181 VTDYKGNTKLKASAGRLEELKGGPKLSRYAGQAIAEYVGRESRKLGLKSVVMRVKGFTFF 240
           VTD KGNTKLKASAGRLEELKGGPKLSRYA +A AEYVGRESRKLGLKSVVMRVKGFT+F
Sbjct: 181 VTDNKGNTKLKASAGRLEELKGGPKLSRYAAEATAEYVGRESRKLGLKSVVMRVKGFTYF 240

Query: 241 KKKRQAIMSWRDGFTDSRSDRNPIVYIEDTTRRAHNGCRLPKQRRV 284
           KKK+QAI+SWRDGFTDSRSD+NPIVYIEDTTRRAHNGCRLPKQRRV
Sbjct: 241 KKKKQAILSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV 286

[Close]

BLAST of CaUC10G187280 vs. ExPASy TrEMBL
Match: A0A6J1FTT5 (probable ribosomal protein S11, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111447246 PE=3 SV=1)

HSP 1 Score: 454.5 bits (1168), Expect = 3.2e-124
Identity = 229/286 (80.07%), Postives = 253/286 (88.46%), Query Frame = 0


Query: 1   MPKLSLSHLSSLFQSSSLRHGPSFSPSRLSISPFIGSDLRSFMSSL---HRSDLTGSVQL 60
           M +L   HLSSLF+SSSL HG SFS SRLSISPF G+D RS MSSL   H S+++GSVQL
Sbjct: 1   MRRLPFPHLSSLFRSSSLSHGSSFSSSRLSISPFFGTDARSPMSSLHFSHGSEISGSVQL 60

Query: 61  DSRVSGCLGISQGDSANVGREIVGRGWKALGAQGSCWGLARSNESVSVPYSISSRCYGQY 120
           D + SGC+ + +GDS NVGREIVGR WKALGAQG CWGLARS+E+VSVPYS SSRCY  Y
Sbjct: 61  DRQDSGCVNLPRGDSVNVGREIVGRAWKALGAQGPCWGLARSSENVSVPYSSSSRCYVHY 120

Query: 121 NNWPNADTGRNLKSMSFVKGILEEDGRDFTGSSRFPRPPNMEHNADIVHVKLMRNNTFIT 180
           +  PNADTGRN KSM+FV+GILEEDG DF GSS+FPRPPNMEHNADIVHVKLMRNNTFIT
Sbjct: 121 DGRPNADTGRNFKSMNFVRGILEEDGMDFMGSSQFPRPPNMEHNADIVHVKLMRNNTFIT 180

Query: 181 VTDYKGNTKLKASAGRLEELKGGPKLSRYAGQAIAEYVGRESRKLGLKSVVMRVKGFTFF 240
           VTD KGNTKLKAS+GRLEELKGGPKLSRYA +A AEYVGRES+KLGLKSVVMRVKGFT+F
Sbjct: 181 VTDNKGNTKLKASSGRLEELKGGPKLSRYAAEATAEYVGRESKKLGLKSVVMRVKGFTYF 240

Query: 241 KKKRQAIMSWRDGFTDSRSDRNPIVYIEDTTRRAHNGCRLPKQRRV 284
           KKK+QAI+SWRDGFTDS+ D+NPIVYIEDTTRRAHNGCRLPKQRRV
Sbjct: 241 KKKKQAILSWRDGFTDSKRDQNPIVYIEDTTRRAHNGCRLPKQRRV 286

[Close]

BLAST of CaUC10G187280 vs. ExPASy TrEMBL
Match: A0A6J1CJJ5 (probable ribosomal protein S11, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111011744 PE=3 SV=1)

HSP 1 Score: 430.3 bits (1105), Expect = 6.4e-117
Identity = 227/286 (79.37%), Postives = 247/286 (86.36%), Query Frame = 0


Query: 1   MPKLSLSHLSSLFQSSSLRHGPSFSPSRLSISPFIGSDLRSFMSSL--HRSDLTGSVQLD 60
           M +L LSHLSSLF+SSSL HG S SP R SIS F GSD RS M+SL  HRSDLTGSVQLD
Sbjct: 1   MRRLQLSHLSSLFRSSSLSHGSSSSPFRPSISSFTGSDARSPMASLHPHRSDLTGSVQLD 60

Query: 61  SRVSGCLGISQGDSANVGREI-VGRGWKALGAQGSCWGLARSNESVSVPYSISSRCYGQY 120
           ++VSGCL + QGDS +VGR+I VGR WKALG  G      RS E+VSVPY+++S+CY  Y
Sbjct: 61  NQVSGCLDLPQGDSMDVGRQIKVGRAWKALGVMG------RSRENVSVPYAVNSKCYVHY 120

Query: 121 NNWPNADTGRNLKSMSFVKGILEEDGRDFTGSSRFPRPPNMEHNADIVHVKLMRNNTFIT 180
           ++  NADTGRN KSM+FV+GILEEDGRDF   S FPRPPNME NADIVHVKLMRNNTFIT
Sbjct: 121 DSRINADTGRNFKSMNFVRGILEEDGRDFMAGSPFPRPPNMESNADIVHVKLMRNNTFIT 180

Query: 181 VTDYKGNTKLKASAGRLEELKGGPKLSRYAGQAIAEYVGRESRKLGLKSVVMRVKGFTFF 240
           VTD KGNTKLKASAGRLEELKGGPKLSRYA +AIAEYVGRESRKLGLKSVVMRVKGFT+F
Sbjct: 181 VTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYF 240

Query: 241 KKKRQAIMSWRDGFTDSRSDRNPIVYIEDTTRRAHNGCRLPKQRRV 284
           KKKRQAIMSWRDGFTDSRSD+NPIVYIEDTTRRAHNGCRLPKQRRV
Sbjct: 241 KKKRQAIMSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV 280

[Close]

BLAST of CaUC10G187280 vs. ExPASy TrEMBL
Match: A0A0A0KVQ8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G107470 PE=3 SV=1)

HSP 1 Score: 424.5 bits (1090), Expect = 3.5e-115
Identity = 221/284 (77.82%), Postives = 247/284 (86.97%), Query Frame = 0


Query: 1   MPKLSLSHLSSLFQSSSLRHGPSFSPSRLSISPFIGSDLRSFMSSLHRSDLTGSVQLDSR 60
           MPKLSLSHLSSLF+SSSL   PSFSPSRLSISPFIGSD  S MSSLHRSDLTGS+Q  ++
Sbjct: 1   MPKLSLSHLSSLFRSSSLSPAPSFSPSRLSISPFIGSDAPSRMSSLHRSDLTGSLQPHNQ 60

Query: 61  VSGCLGISQGDSANVGREIVGRGWKALGAQGSCWGLARSNESVSVPYSISSRCYGQYNNW 120
            SGCL     DSANVGREIVGRGWK++G QG   GLAR +E VS+PYSISSRCYG+Y+N 
Sbjct: 61  FSGCL----RDSANVGREIVGRGWKSMGVQGPSSGLARPSEGVSIPYSISSRCYGEYDNR 120

Query: 121 PN-ADTGRNLKSMSFVKGILEEDGRDFTGSSRFPRPPNMEHNADIVHVKLMRNNTFITVT 180
           PN  DTGRNLK M+FV+GILEE+ R F G+ +F RP NMEHNADIVH+KLMRNN+F+TVT
Sbjct: 121 PNPPDTGRNLKPMNFVRGILEEEERGFFGTPQFLRPSNMEHNADIVHIKLMRNNSFVTVT 180

Query: 181 DYKGNTKLKASAGRLEELKGGPKLSRYAGQAIAEYVGRESRKLGLKSVVMRVKGFTFFKK 240
           D KGNTKLKASAGRLE   GG KLSRY+  +IAEYVGRESRKLGLKSVVMRVKGFTFFKK
Sbjct: 181 DNKGNTKLKASAGRLE---GGAKLSRYSADSIAEYVGRESRKLGLKSVVMRVKGFTFFKK 240

Query: 241 KRQAIMSWRDGFTDSRSDRNPIVYIEDTTRRAHNGCRLPKQRRV 284
           K+QAI+SWRDGFTDSR+D+NPIVY+EDTTRRAHNGCRLPK+RRV
Sbjct: 241 KKQAILSWRDGFTDSRTDQNPIVYVEDTTRRAHNGCRLPKKRRV 277

[Close]

BLAST of CaUC10G187280 vs. ExPASy TrEMBL
Match: A0A5A7TPI6 (Putative ribosomal protein S11 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G00350 PE=3 SV=1)

HSP 1 Score: 410.2 bits (1053), Expect = 6.9e-111
Identity = 217/285 (76.14%), Postives = 240/285 (84.21%), Query Frame = 0


Query: 1   MPKLSLSHLSSLFQSSSLRHGPSFSPSRLSISPFIGSDLRSFMSSLHRSDLTGSVQLDSR 60
           MPKLSLSHLS LF+SSSL   PSFSPSRLSISPFIGSD  S  SS   S LTGS+Q  + 
Sbjct: 1   MPKLSLSHLSPLFRSSSLSRSPSFSPSRLSISPFIGSDAPSRFSSPLPSHLTGSLQPHNH 60

Query: 61  VSGCLGISQGDSANVGREIVGRGWKALGAQGSCWGLARSNESVSVPYSISSRCYGQYNNW 120
            SG          +VGREIVGRGWKA+G QG  WGLARS ESVSVPYSISSRCYG+Y+N 
Sbjct: 61  FSG----------SVGREIVGRGWKAMGVQGPSWGLARSTESVSVPYSISSRCYGEYDNR 120

Query: 121 PN-ADTGRNLKSMSFVKGILEEDGRDFTGSSRFPRPPNMEHNADIVHVKLMRNNTFITVT 180
           PN  DTGRNLK+++FV+GILEED + F+   ++ RP NMEHNADIVH+KLMRNN F+TVT
Sbjct: 121 PNPPDTGRNLKTLNFVRGILEEDEKVFSDVPQYLRPTNMEHNADIVHIKLMRNNAFVTVT 180

Query: 181 DYKGNTKLKASAGRLEELK-GGPKLSRYAGQAIAEYVGRESRKLGLKSVVMRVKGFTFFK 240
           D KGNTKLKASAGRLEELK GG KLSRY+G +IAEYVGRESRKLGLKSVVMRVKGFTFFK
Sbjct: 181 DNKGNTKLKASAGRLEELKGGGAKLSRYSGDSIAEYVGRESRKLGLKSVVMRVKGFTFFK 240

Query: 241 KKRQAIMSWRDGFTDSRSDRNPIVYIEDTTRRAHNGCRLPKQRRV 284
           KK+QAI+SWRDGFTDSRSD+NPIVYIEDTTRRAHNGCRLPK+RRV
Sbjct: 241 KKKQAILSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKKRRV 275

[Close]

BLAST of CaUC10G187280 vs. TAIR 10
Match: AT1G31817.1 (Ribosomal L18p/L5e family protein )

HSP 1 Score: 197.2 bits (500), Expect = 1.8e-50
Identity = 91/162 (56.17%), Postives = 127/162 (78.40%), Query Frame = 0


Query: 122 NADTGRNLKSMSFVKGILEEDGRDFTGSSRFPRPPNMEHNADIVHVKLMRNNTFITVTDY 181
           N+ +G     + FV+ ++E++GR   G     + PN+E NADI+H+K++RNNTF+TVTD 
Sbjct: 153 NSRSGGKSSDLDFVREVIEDEGRRTAGIFSHFQRPNLETNADIIHIKMLRNNTFVTVTDS 212

Query: 182 KGNTKLKASAGRLEELKGGPKLSRYAGQAIAEYVGRESRKLGLKSVVMRVKGFTFFKKKR 241
           KGN K KA++G L +LKGG K++ Y   A AE +GR ++ +GLKSVV++V GFT F KK+
Sbjct: 213 KGNVKCKATSGSLPDLKGGRKMTNYTADATAENIGRRAKAMGLKSVVVKVNGFTHFGKKK 272

Query: 242 QAIMSWRDGFTDSRSDRNPIVYIEDTTRRAHNGCRLPKQRRV 284
           +AI+++RDGFT+SRSD+NPIVYIEDTTR+AHNGCRLP++RRV
Sbjct: 273 KAIIAFRDGFTNSRSDQNPIVYIEDTTRKAHNGCRLPRKRRV 314

[Close]

BLAST of CaUC10G187280 vs. TAIR 10
Match: ATCG00750.1 (ribosomal protein S11 )

HSP 1 Score: 48.5 bits (114), Expect = 1.0e-05
Identity = 36/120 (30.00%), Postives = 56/120 (46.67%), Query Frame = 0


Query: 164 IVHVKLMRNNTFITVTDYKGNTKLKASAGRLEELKGGPKLSRYAGQAIAEYVGRESRKLG 223
           ++HV+   NNT +TVTD +G     +SAG     +G  + + +A Q  A    R     G
Sbjct: 29  VIHVQASFNNTIVTVTDVRGRVISWSSAGTC-GFRGTRRGTPFAAQTAAGNAIRAVVDQG 88

Query: 224 LKSVVMRVKGFTFFKKKRQAIMSWRDGFTDSRSDRNPIVYIEDTTRRAHNGCRLPKQRRV 283
           ++   +R+KG    +      +  R G          + ++ D T   HNGCR PK+RRV
Sbjct: 89  MQRAEVRIKGPGLGRDAALRAIR-RSGIL--------LSFVRDVTPMPHNGCRPPKKRRV 138

The following BLAST results are available for this feature:

BLAST of CaUC10G187280 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903066.1	4.3e-131	85.16	probable ribosomal protein S11, mitochondrial [Benincasa hispida]	[more]
XP_022999735.1	1.3e-124	81.47	probable ribosomal protein S11, mitochondrial [Cucurbita maxima]	[more]
XP_022942058.1	6.6e-124	80.07	probable ribosomal protein S11, mitochondrial [Cucurbita moschata]	[more]
KAG7030891.1	3.3e-123	79.72	putative ribosomal protein S11, mitochondrial [Cucurbita argyrosperma subsp. arg...	[more]
XP_023526167.1	4.0e-121	79.02	probable ribosomal protein S11, mitochondrial [Cucurbita pepo subsp. pepo]	[more]

BLAST of CaUC10G187280 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VZT8	2.5e-49	56.17	Probable ribosomal protein S11, mitochondrial OS=Arabidopsis thaliana OX=3702 GN...	[more]
P26870	9.2e-12	37.01	Ribosomal protein S11, mitochondrial OS=Marchantia polymorpha OX=3197 GN=RPS11 P...	[more]
P46746	2.1e-11	34.92	Ribosomal protein S11, mitochondrial OS=Prototheca wickerhamii OX=3111 GN=RPS11 ...	[more]
Q0BYD7	1.7e-10	34.81	30S ribosomal protein S11 OS=Hyphomonas neptunium (strain ATCC 15444) OX=228405 ...	[more]
A5D5E6	1.7e-10	39.17	30S ribosomal protein S11 OS=Pelotomaculum thermopropionicum (strain DSM 13744 /...	[more]

BLAST of CaUC10G187280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KGF8	6.4e-125	81.47	probable ribosomal protein S11, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1FTT5	3.2e-124	80.07	probable ribosomal protein S11, mitochondrial OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1CJJ5	6.4e-117	79.37	probable ribosomal protein S11, mitochondrial OS=Momordica charantia OX=3673 GN=...	[more]
A0A0A0KVQ8	3.5e-115	77.82	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G107470 PE=3 SV=1	[more]
A0A5A7TPI6	6.9e-111	76.14	Putative ribosomal protein S11 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]

BLAST of CaUC10G187280 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G31817.1	1.8e-50	56.17	Ribosomal L18p/L5e family protein	[more]
ATCG00750.1	1.0e-05	30.00	ribosomal protein S11	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001971	Ribosomal protein S11	PFAM	PF00411	Ribosomal_S11	coord: 164..282 e-value: 3.6E-13 score: 49.9
IPR001971	Ribosomal protein S11	PANTHER	PTHR11759	40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11	coord: 88..283
IPR001971	Ribosomal protein S11	HAMAP	MF_01310	Ribosomal_S11	coord: 127..283 score: 15.884964
IPR036967	Ribosomal protein S11 superfamily	GENE3D	3.30.420.80	Ribosomal protein S11	coord: 154..283 e-value: 2.0E-33 score: 117.3
None	No IPR available	PANTHER	PTHR11759:SF34	RIBOSOMAL PROTEIN S11, MITOCHONDRIAL-RELATED	coord: 88..283
None	No IPR available	SUPERFAMILY	53137	Translational machinery components	coord: 162..283

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC10G187280.1	CaUC10G187280.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0000028	ribosomal small subunit assembly
biological_process	GO:0006412	translation
cellular_component	GO:0005763	mitochondrial small ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0048027	mRNA 5'-UTR binding
molecular_function	GO:0070181	small ribosomal subunit rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome