CaUC10G186850 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC10G186850
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	60S acidic ribosomal protein P1-like
Location	Ciama_Chr10: 16318784 .. 16320483 (+)
RNA-Seq Expression	CaUC10G186850
Synteny	CaUC10G186850

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAAGCGTTAAATTGGGAAGTTGGGTAAAATAAGTATACAATAATAATTAATTAAATATATGATTGGGATTACAAAATTAATATTTCGACAAAATCTTCCAAAAATGATTATTCTCTTAAGTTGCTTTTTAAGATAGTAAGATTTAACTTTTCAAGAGAGAGAGAGAGAGAGAGGGTAAGATTAAGATAAGAAGTAGGATTAGACCCTTATATTTGGGCTTGGGCTATCGAGGTAGAAAGCCCTTTTCTAAATGGTCCTGGGAAAGCTTCAACGGCCCAATAGATTTAGCCCAAGCCAAATGAAACTGGTCCAATACCGAGGGAGCATGAGAAACCCTAATCTCTCTTCACCCATTATATAGCATACTCAGAATCAAAACTATGCCGATCACCGTACGCGCATTTGCTCCGAATTGTCACCTGGTATGTTGCTCCTCCAAGATCTTCATTTATCAATTTTTCGCTACTCTCTTCCATCGTTTTCGACTGCCTTCTGGGTTCTGATTGTTTAATTCGCATTTCAGGTCCTACGCTAGCCATGTCTACCAGTGAACTCGCCTGCGCCTACGCCGCCCTGGCTCTTCACGATGACGGAATCGCAATCACTGTATGACCATTCTCTTTCTGTGTATTTATCTTTTCCTTTTCTGAATTGGTTGATGCGTGATTAATCTGCGTAATGGGTCTAGGCGGAAAAGATTGCAGCCGTAGTAGCAGCCGCGGGGCTCAGTGTGGAATCTTACTGGCCCAGCCTTTTTGCTAAATTGGCGGAGAAGAGGAATATTGGGGACCTTCTTCTGAATGTTGGCTGTGGAGGTGGCGCTGCGGCTCCCGTTTCTGTAGCTGCTCCTGCCGTTAGTGCTGCTGCCGCTCCTGCCGTCGAGGAAAAGAAGGTATGCTGATGAGTGTTTATTTGTCTTCATCATAGTTTAACTGTGGCTCTGATAGAAATGGTCATTCCAACTGTTTTTGTAGTGAAATTTTTTGTAGTTCTAACCCTTTTATTCTATATACTTCTCTGTATCTGCTAGTTCTAACTTTCCATTTACTCTCCATTTTCAGTAAGGATCTCTTTCATATATACCCATATAACCCACATTCTGTATGCTGCTAATATCCTATTACTAATACGAATACTAGTTAGTTATGACTGCTGAATCAGTTAATTATGATCAATAAAAATGAACTGTTTCACTGTTGCCGCGCATCTTCAATTTAGTATTTCGCAATTAACCCATTAGGTGGTTATGATAATATCCCTTTGAACTTGTATTAGCAACATACAAAATGTTGTATTAGCAACATCCCTTTGAACTTTTATTAGCAGCAACATACAAAATGGGGTTTATGAATATGTATCTAAGAGAATCGATAGAAAGCTTAATATCGATGAGCATAGTTTGTACTTTTGAAAATTTTAGTTTCCACCTTCATCGATTGACATGGTAGTGACTTAGAATCAATCTTATTGTTCCAATTTAGTTTTCTTCGCCTCTCTTTTCCCCATTCTGCGATTTGTTCATTCAAGCCTATTGTGCAGGAGGAGCCAAAGGAAGAGAGCGATGACGACATGGGATTCAGCTTATTCGACTAGGAGGCTCTTTAAATTTAGGGGATTGTATTAGGAAACTATTGAGTGGGTAGGCCTAATCTTGATTTTCCGCTATTCATTTGTCTCAAGATTTGTTTTTTTTTTT

mRNA sequence

ATGTCAAGCGTTAAATTGGGAAGTTGGCATACTCAGAATCAAAACTATGCCGATCACCGTACGCGCATTTGCTCCGAATTGTCACCTGGTCCTACGCTAGCCATGTCTACCAGTGAACTCGCCTGCGCCTACGCCGCCCTGGCTCTTCACGATGACGGAATCGCAATCACTGCGGAAAAGATTGCAGCCGTAGTAGCAGCCGCGGGGCTCAGTGTGGAATCTTACTGGCCCAGCCTTTTTGCTAAATTGGCGGAGAAGAGGAATATTGGGGACCTTCTTCTGAATGTTGGCTGTGGAGGTGGCGCTGCGGCTCCCGTTTCTGTAGCTGCTCCTGCCGTTAGTGCTGCTGCCGCTCCTGCCGTCGAGGAAAAGAAGTTTCCACCTTCATCGATTGACATGGTAGAGGAGCCAAAGGAAGAGAGCGATGACGACATGGGATTCAGCTTATTCGACTAGGAGGCTCTTTAAATTTAGGGGATTGTATTAGGAAACTATTGAGTGGGTAGGCCTAATCTTGATTTTCCGCTATTCATTTGTCTCAAGATTTGTTTTTTTTTTT

Coding sequence (CDS)

ATGTCAAGCGTTAAATTGGGAAGTTGGCATACTCAGAATCAAAACTATGCCGATCACCGTACGCGCATTTGCTCCGAATTGTCACCTGGTCCTACGCTAGCCATGTCTACCAGTGAACTCGCCTGCGCCTACGCCGCCCTGGCTCTTCACGATGACGGAATCGCAATCACTGCGGAAAAGATTGCAGCCGTAGTAGCAGCCGCGGGGCTCAGTGTGGAATCTTACTGGCCCAGCCTTTTTGCTAAATTGGCGGAGAAGAGGAATATTGGGGACCTTCTTCTGAATGTTGGCTGTGGAGGTGGCGCTGCGGCTCCCGTTTCTGTAGCTGCTCCTGCCGTTAGTGCTGCTGCCGCTCCTGCCGTCGAGGAAAAGAAGTTTCCACCTTCATCGATTGACATGGTAGAGGAGCCAAAGGAAGAGAGCGATGACGACATGGGATTCAGCTTATTCGACTAG

Protein sequence

MSSVKLGSWHTQNQNYADHRTRICSELSPGPTLAMSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLSVESYWPSLFAKLAEKRNIGDLLLNVGCGGGAAAPVSVAAPAVSAAAAPAVEEKKFPPSSIDMVEEPKEESDDDMGFSLFD

Homology

[Close]

BLAST of CaUC10G186850 vs. NCBI nr
Match: XP_038905286.1 (60S acidic ribosomal protein P1-like [Benincasa hispida])

HSP 1 Score: 188.7 bits (478), Expect = 3.6e-44
Identity = 106/117 (90.60%), Postives = 108/117 (92.31%), Query Frame = 0


Query: 35  MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLSVESYWPSLFAKLAEKRNIGDLLL 94
           MSTSELACAYAALALHDDGIAITAEKIAAV+AAAGLSVESYWPSLFAKLAEKRNIGDLLL
Sbjct: 1   MSTSELACAYAALALHDDGIAITAEKIAAVIAAAGLSVESYWPSLFAKLAEKRNIGDLLL 60

Query: 95  NVGCGGGAAAPVSVAAPAVSAAAAPAVEEKKFPPSSIDMVEEPKEESDDDMGFSLFD 152
           NVGCGGGAAAPV+VAAPAVSAAAAPAVEEKK         EEPKEESDDDMGFSLFD
Sbjct: 61  NVGCGGGAAAPVAVAAPAVSAAAAPAVEEKK---------EEPKEESDDDMGFSLFD 108

[Close]

BLAST of CaUC10G186850 vs. NCBI nr
Match: XP_038905168.1 (60S acidic ribosomal protein P1-like [Benincasa hispida])

HSP 1 Score: 187.2 bits (474), Expect = 1.0e-43
Identity = 106/117 (90.60%), Postives = 107/117 (91.45%), Query Frame = 0


Query: 35  MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLSVESYWPSLFAKLAEKRNIGDLLL 94
           MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGL VESYWPSLFAKLAEKRNIGDLLL
Sbjct: 1   MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLL 60

Query: 95  NVGCGGGAAAPVSVAAPAVSAAAAPAVEEKKFPPSSIDMVEEPKEESDDDMGFSLFD 152
           NVGCGGGAAAPV+VAAPAVSAAAAPAVEEKK         EEPKEESDDDMGFSLFD
Sbjct: 61  NVGCGGGAAAPVAVAAPAVSAAAAPAVEEKK---------EEPKEESDDDMGFSLFD 108

[Close]

BLAST of CaUC10G186850 vs. NCBI nr
Match: XP_008455614.1 (PREDICTED: 60S acidic ribosomal protein P1-like isoform X1 [Cucumis melo])

HSP 1 Score: 180.6 bits (457), Expect = 9.8e-42
Identity = 102/117 (87.18%), Postives = 104/117 (88.89%), Query Frame = 0


Query: 35  MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLSVESYWPSLFAKLAEKRNIGDLLL 94
           MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGL VESYWPSLFAKLAEKRNIGDLLL
Sbjct: 1   MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLL 60

Query: 95  NVGCGGGAAAPVSVAAPAVSAAAAPAVEEKKFPPSSIDMVEEPKEESDDDMGFSLFD 152
           NVGCGGGAAAPV+VAAP  SAAAA A+EEKK         EEPKEESDDDMGFSLFD
Sbjct: 61  NVGCGGGAAAPVAVAAPTASAAAASAIEEKK---------EEPKEESDDDMGFSLFD 108

[Close]

BLAST of CaUC10G186850 vs. NCBI nr
Match: XP_004138012.2 (60S acidic ribosomal protein P1 [Cucumis sativus] >KGN63426.1 hypothetical protein Csa_013711 [Cucumis sativus])

HSP 1 Score: 179.5 bits (454), Expect = 2.2e-41
Identity = 101/117 (86.32%), Postives = 104/117 (88.89%), Query Frame = 0


Query: 35  MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLSVESYWPSLFAKLAEKRNIGDLLL 94
           MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGL VESYWPSLFAKLAEKRNIGDLLL
Sbjct: 1   MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLL 60

Query: 95  NVGCGGGAAAPVSVAAPAVSAAAAPAVEEKKFPPSSIDMVEEPKEESDDDMGFSLFD 152
           NVGCGGGAAA V+VAAP  SAAAAPA+EEK+         EEPKEESDDDMGFSLFD
Sbjct: 61  NVGCGGGAAASVAVAAPTASAAAAPAIEEKR---------EEPKEESDDDMGFSLFD 108

[Close]

BLAST of CaUC10G186850 vs. NCBI nr
Match: KAA0045366.1 (60S acidic ribosomal protein P1-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 179.1 bits (453), Expect = 2.9e-41
Identity = 101/117 (86.32%), Postives = 103/117 (88.03%), Query Frame = 0


Query: 35  MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLSVESYWPSLFAKLAEKRNIGDLLL 94
           MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGL VESYWPSLFAKLAEKRNIGDLLL
Sbjct: 1   MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLL 60

Query: 95  NVGCGGGAAAPVSVAAPAVSAAAAPAVEEKKFPPSSIDMVEEPKEESDDDMGFSLFD 152
           NVGCGGGAAAPV+VAAP  SAA A A+EEKK         EEPKEESDDDMGFSLFD
Sbjct: 61  NVGCGGGAAAPVAVAAPTASAAVASAIEEKK---------EEPKEESDDDMGFSLFD 108

[Close]

BLAST of CaUC10G186850 vs. ExPASy Swiss-Prot
Match: P52855 (60S acidic ribosomal protein P1 OS=Zea mays OX=4577 GN=RPP1A PE=1 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 9.6e-32
Identity = 83/119 (69.75%), Postives = 93/119 (78.15%), Query Frame = 0


Query: 35  MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLSVESYWPSLFAKLAEKRNIGDLLL 94
           M++ ELAC YAAL L DDGIAITAEKIA +V AA + VESYWP+LFAKL EKRN+ DL+L
Sbjct: 1   MASGELACRYAALILSDDGIAITAEKIATIVKAANIKVESYWPALFAKLLEKRNVEDLIL 60

Query: 95  NVGCGGGAAAPVSVAAPA--VSAAAAPAVEEKKFPPSSIDMVEEPKEESDDDMGFSLFD 152
           +VG GGG AAPV+ AAPA   +AAAAPAVEEKK         EE KEESDDDMGFSLFD
Sbjct: 61  SVGSGGG-AAPVAAAAPAGGAAAAAAPAVEEKK---------EEAKEESDDDMGFSLFD 109

[Close]

BLAST of CaUC10G186850 vs. ExPASy Swiss-Prot
Match: Q8LCW9 (60S acidic ribosomal protein P1-1 OS=Arabidopsis thaliana OX=3702 GN=RPP1A PE=3 SV=2)

HSP 1 Score: 131.0 bits (328), Expect = 1.2e-29
Identity = 76/120 (63.33%), Postives = 90/120 (75.00%), Query Frame = 0


Query: 35  MST-SELACAYAALALHDDGIAITAEKIAAVVAAAGLSVESYWPSLFAKLAEKRNIGDLL 94
           MST  ELAC+YA + L D+GIAITA+KIA +V AAG+S+ESYWP LFAK+AEKRN+ DL+
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGVSIESYWPMLFAKMAEKRNVTDLI 60

Query: 95  LNVGCGGGAAAPVSVAAPAV--SAAAAPAVEEKKFPPSSIDMVEEPKEESDDDMGFSLFD 152
           +NVG GGG  APV+ AAPA    AAAAPA EEKK         +EP EESD D+GF LFD
Sbjct: 61  MNVGAGGGGGAPVAAAAPAAGGGAAAAPAAEEKK--------KDEPAEESDGDLGFGLFD 112

[Close]

BLAST of CaUC10G186850 vs. ExPASy Swiss-Prot
Match: Q8LEQ0 (60S acidic ribosomal protein P1-3 OS=Arabidopsis thaliana OX=3702 GN=RPP1C PE=1 SV=2)

HSP 1 Score: 129.8 bits (325), Expect = 2.6e-29
Identity = 75/121 (61.98%), Postives = 91/121 (75.21%), Query Frame = 0


Query: 35  MST-SELACAYAALALHDDGIAITAEKIAAVVAAAGLSVESYWPSLFAKLAEKRNIGDLL 94
           MST  ELAC+YA + L D+GIAITA+KIA +V AAG+++ESYWP LFAK+AEKRN+ DL+
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGVTIESYWPMLFAKMAEKRNVTDLI 60

Query: 95  LNVGCGGGAAAPVSVAAPAV---SAAAAPAVEEKKFPPSSIDMVEEPKEESDDDMGFSLF 152
           +NVG GGG  APV+ AAPA    +AAAAPA EEKK         +EP EESD D+GF LF
Sbjct: 61  MNVGAGGGGGAPVAAAAPAAGGGAAAAAPAAEEKK--------KDEPAEESDGDLGFGLF 113

[Close]

BLAST of CaUC10G186850 vs. ExPASy Swiss-Prot
Match: O23095 (60S acidic ribosomal protein P1-2 OS=Arabidopsis thaliana OX=3702 GN=RPP1B PE=1 SV=2)

HSP 1 Score: 124.4 bits (311), Expect = 1.1e-27
Identity = 75/122 (61.48%), Postives = 90/122 (73.77%), Query Frame = 0


Query: 35  MST-SELACAYAALALHDDGIAITAEKIAAVVAAAGLSVESYWPSLFAKLAEKRNIGDLL 94
           MST  ELAC+YA + L D+GIAIT++KIA +V AAG+ +ESYWP LFAK+AEKRN+ DL+
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITSDKIATLVKAAGVEIESYWPMLFAKMAEKRNVTDLI 60

Query: 95  LNVGC-GGGAAAPVSVAAPAV---SAAAAPAVEEKKFPPSSIDMVEEPKEESDDDMGFSL 152
           +NVG  GGG  APVS AAPA    +AAAAPA EEKK         +EP EESD D+GF L
Sbjct: 61  MNVGAGGGGGGAPVSAAAPAAAGGAAAAAPAKEEKK---------DEPAEESDGDLGFGL 113

[Close]

BLAST of CaUC10G186850 vs. ExPASy Swiss-Prot
Match: P29763 (60S acidic ribosomal protein P1 OS=Chlamydomonas reinhardtii OX=3055 PE=3 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 2.8e-23
Identity = 70/121 (57.85%), Postives = 81/121 (66.94%), Query Frame = 0


Query: 35  MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLSVESYWPSLFAKLAEKRNIGDLLL 94
           MSTSELAC YAAL LHDDG+ ITA+ I  +  AAG+ VE YWP+LFAKL  K+++ DL+ 
Sbjct: 1   MSTSELACTYAALILHDDGLEITADNINTICKAAGVEVEGYWPALFAKLFAKKSMDDLIT 60

Query: 95  NVGCGGG----AAAPVSVAAPAVSAAAAPAVEEKKFPPSSIDMVEEPKEESDDDMGFSLF 152
           NVG GGG    AAAP +  APA  A AAP  EEKK          EP EE  +DMGFSLF
Sbjct: 61  NVGAGGGAAPAAAAPAAGGAPA--AGAAPKKEEKK----------EPSEE--EDMGFSLF 107

[Close]

BLAST of CaUC10G186850 vs. ExPASy TrEMBL
Match: A0A1S3C0X1 (60S acidic ribosomal protein P1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495745 PE=3 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 4.7e-42
Identity = 102/117 (87.18%), Postives = 104/117 (88.89%), Query Frame = 0


Query: 35  MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLSVESYWPSLFAKLAEKRNIGDLLL 94
           MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGL VESYWPSLFAKLAEKRNIGDLLL
Sbjct: 1   MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLL 60

Query: 95  NVGCGGGAAAPVSVAAPAVSAAAAPAVEEKKFPPSSIDMVEEPKEESDDDMGFSLFD 152
           NVGCGGGAAAPV+VAAP  SAAAA A+EEKK         EEPKEESDDDMGFSLFD
Sbjct: 61  NVGCGGGAAAPVAVAAPTASAAAASAIEEKK---------EEPKEESDDDMGFSLFD 108

[Close]

BLAST of CaUC10G186850 vs. ExPASy TrEMBL
Match: A0A0A0LTV1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G000010 PE=3 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 1.1e-41
Identity = 101/117 (86.32%), Postives = 104/117 (88.89%), Query Frame = 0


Query: 35  MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLSVESYWPSLFAKLAEKRNIGDLLL 94
           MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGL VESYWPSLFAKLAEKRNIGDLLL
Sbjct: 1   MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLL 60

Query: 95  NVGCGGGAAAPVSVAAPAVSAAAAPAVEEKKFPPSSIDMVEEPKEESDDDMGFSLFD 152
           NVGCGGGAAA V+VAAP  SAAAAPA+EEK+         EEPKEESDDDMGFSLFD
Sbjct: 61  NVGCGGGAAASVAVAAPTASAAAAPAIEEKR---------EEPKEESDDDMGFSLFD 108

[Close]

BLAST of CaUC10G186850 vs. ExPASy TrEMBL
Match: A0A5A7TTB2 (60S acidic ribosomal protein P1-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G001460 PE=3 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 1.4e-41
Identity = 101/117 (86.32%), Postives = 103/117 (88.03%), Query Frame = 0


Query: 35  MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLSVESYWPSLFAKLAEKRNIGDLLL 94
           MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGL VESYWPSLFAKLAEKRNIGDLLL
Sbjct: 1   MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLL 60

Query: 95  NVGCGGGAAAPVSVAAPAVSAAAAPAVEEKKFPPSSIDMVEEPKEESDDDMGFSLFD 152
           NVGCGGGAAAPV+VAAP  SAA A A+EEKK         EEPKEESDDDMGFSLFD
Sbjct: 61  NVGCGGGAAAPVAVAAPTASAAVASAIEEKK---------EEPKEESDDDMGFSLFD 108

[Close]

BLAST of CaUC10G186850 vs. ExPASy TrEMBL
Match: A0A6J1CGB2 (60S acidic ribosomal protein P1-like OS=Momordica charantia OX=3673 GN=LOC111011416 PE=3 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 1.2e-40
Identity = 102/120 (85.00%), Postives = 106/120 (88.33%), Query Frame = 0


Query: 35  MSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLSVESYWPSLFAKLAEKRNIGDLLL 94
           MSTSELACAYAA+AL+DDGIAITAEKIAAVVAAAGL VESYWPSLFAKLAEKRNIGDLLL
Sbjct: 1   MSTSELACAYAAMALYDDGIAITAEKIAAVVAAAGLCVESYWPSLFAKLAEKRNIGDLLL 60

Query: 95  NVGCGGGAAAPVSVAAP---AVSAAAAPAVEEKKFPPSSIDMVEEPKEESDDDMGFSLFD 152
           NVGCGGGAAAPVSVAAP   A ++AAAPAVEEKK         EEPKEESDDDMGFSLFD
Sbjct: 61  NVGCGGGAAAPVSVAAPAGGAAASAAAPAVEEKK---------EEPKEESDDDMGFSLFD 111

[Close]

BLAST of CaUC10G186850 vs. ExPASy TrEMBL
Match: A0A6J1JAB2 (60S acidic ribosomal protein P1 OS=Cucurbita maxima OX=3661 GN=LOC111482693 PE=3 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 5.8e-40
Identity = 106/136 (77.94%), Postives = 110/136 (80.88%), Query Frame = 0


Query: 25  SELSPGP------TLAMSTSELACAYAALALHDDGIAITAEKIAAVVAAAGLSVESYWPS 84
           S+  PGP      TL MS SELACAYAALAL+DDGIAITA+KIAAVVAAAGL VESYWPS
Sbjct: 11  SKYCPGPHCIPDATLTMSRSELACAYAALALYDDGIAITADKIAAVVAAAGLCVESYWPS 70

Query: 85  LFAKLAEKRNIGDLLLNVGCGGGAAAPVSVAAPAVSA---AAAPAVEEKKFPPSSIDMVE 144
           LFAKLAEKR+IGDLLLNVGCGGGAAAPVSVAA A  A   AAAPAVEEKK         E
Sbjct: 71  LFAKLAEKRDIGDLLLNVGCGGGAAAPVSVAASAGGASASAAAPAVEEKK---------E 130

Query: 145 EPKEESDDDMGFSLFD 152
           EPKEESDDDMGFSLFD
Sbjct: 131 EPKEESDDDMGFSLFD 137

[Close]

BLAST of CaUC10G186850 vs. TAIR 10
Match: AT1G01100.1 (60S acidic ribosomal protein family )

HSP 1 Score: 131.0 bits (328), Expect = 8.3e-31
Identity = 76/120 (63.33%), Postives = 90/120 (75.00%), Query Frame = 0


Query: 35  MST-SELACAYAALALHDDGIAITAEKIAAVVAAAGLSVESYWPSLFAKLAEKRNIGDLL 94
           MST  ELAC+YA + L D+GIAITA+KIA +V AAG+S+ESYWP LFAK+AEKRN+ DL+
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGVSIESYWPMLFAKMAEKRNVTDLI 60

Query: 95  LNVGCGGGAAAPVSVAAPAV--SAAAAPAVEEKKFPPSSIDMVEEPKEESDDDMGFSLFD 152
           +NVG GGG  APV+ AAPA    AAAAPA EEKK         +EP EESD D+GF LFD
Sbjct: 61  MNVGAGGGGGAPVAAAAPAAGGGAAAAPAAEEKK--------KDEPAEESDGDLGFGLFD 112

[Close]

BLAST of CaUC10G186850 vs. TAIR 10
Match: AT1G01100.2 (60S acidic ribosomal protein family )

HSP 1 Score: 131.0 bits (328), Expect = 8.3e-31
Identity = 76/120 (63.33%), Postives = 90/120 (75.00%), Query Frame = 0


Query: 35  MST-SELACAYAALALHDDGIAITAEKIAAVVAAAGLSVESYWPSLFAKLAEKRNIGDLL 94
           MST  ELAC+YA + L D+GIAITA+KIA +V AAG+S+ESYWP LFAK+AEKRN+ DL+
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGVSIESYWPMLFAKMAEKRNVTDLI 60

Query: 95  LNVGCGGGAAAPVSVAAPAV--SAAAAPAVEEKKFPPSSIDMVEEPKEESDDDMGFSLFD 152
           +NVG GGG  APV+ AAPA    AAAAPA EEKK         +EP EESD D+GF LFD
Sbjct: 61  MNVGAGGGGGAPVAAAAPAAGGGAAAAPAAEEKK--------KDEPAEESDGDLGFGLFD 112

[Close]

BLAST of CaUC10G186850 vs. TAIR 10
Match: AT1G01100.4 (60S acidic ribosomal protein family )

HSP 1 Score: 131.0 bits (328), Expect = 8.3e-31
Identity = 76/120 (63.33%), Postives = 90/120 (75.00%), Query Frame = 0


Query: 35  MST-SELACAYAALALHDDGIAITAEKIAAVVAAAGLSVESYWPSLFAKLAEKRNIGDLL 94
           MST  ELAC+YA + L D+GIAITA+KIA +V AAG+S+ESYWP LFAK+AEKRN+ DL+
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGVSIESYWPMLFAKMAEKRNVTDLI 60

Query: 95  LNVGCGGGAAAPVSVAAPAV--SAAAAPAVEEKKFPPSSIDMVEEPKEESDDDMGFSLFD 152
           +NVG GGG  APV+ AAPA    AAAAPA EEKK         +EP EESD D+GF LFD
Sbjct: 61  MNVGAGGGGGAPVAAAAPAAGGGAAAAPAAEEKK--------KDEPAEESDGDLGFGLFD 112

[Close]

BLAST of CaUC10G186850 vs. TAIR 10
Match: AT5G47700.1 (60S acidic ribosomal protein family )

HSP 1 Score: 129.8 bits (325), Expect = 1.8e-30
Identity = 75/121 (61.98%), Postives = 91/121 (75.21%), Query Frame = 0


Query: 35  MST-SELACAYAALALHDDGIAITAEKIAAVVAAAGLSVESYWPSLFAKLAEKRNIGDLL 94
           MST  ELAC+YA + L D+GIAITA+KIA +V AAG+++ESYWP LFAK+AEKRN+ DL+
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGVTIESYWPMLFAKMAEKRNVTDLI 60

Query: 95  LNVGCGGGAAAPVSVAAPAV---SAAAAPAVEEKKFPPSSIDMVEEPKEESDDDMGFSLF 152
           +NVG GGG  APV+ AAPA    +AAAAPA EEKK         +EP EESD D+GF LF
Sbjct: 61  MNVGAGGGGGAPVAAAAPAAGGGAAAAAPAAEEKK--------KDEPAEESDGDLGFGLF 113

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BLAST of CaUC10G186850 vs. TAIR 10
Match: AT5G47700.2 (60S acidic ribosomal protein family )

HSP 1 Score: 129.8 bits (325), Expect = 1.8e-30
Identity = 75/121 (61.98%), Postives = 91/121 (75.21%), Query Frame = 0


Query: 35  MST-SELACAYAALALHDDGIAITAEKIAAVVAAAGLSVESYWPSLFAKLAEKRNIGDLL 94
           MST  ELAC+YA + L D+GIAITA+KIA +V AAG+++ESYWP LFAK+AEKRN+ DL+
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGVTIESYWPMLFAKMAEKRNVTDLI 60

Query: 95  LNVGCGGGAAAPVSVAAPAV---SAAAAPAVEEKKFPPSSIDMVEEPKEESDDDMGFSLF 152
           +NVG GGG  APV+ AAPA    +AAAAPA EEKK         +EP EESD D+GF LF
Sbjct: 61  MNVGAGGGGGAPVAAAAPAAGGGAAAAAPAAEEKK--------KDEPAEESDGDLGFGLF 113

The following BLAST results are available for this feature:

BLAST of CaUC10G186850 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038905286.1	3.6e-44	90.60	60S acidic ribosomal protein P1-like [Benincasa hispida]	[more]
XP_038905168.1	1.0e-43	90.60	60S acidic ribosomal protein P1-like [Benincasa hispida]	[more]
XP_008455614.1	9.8e-42	87.18	PREDICTED: 60S acidic ribosomal protein P1-like isoform X1 [Cucumis melo]	[more]
XP_004138012.2	2.2e-41	86.32	60S acidic ribosomal protein P1 [Cucumis sativus] >KGN63426.1 hypothetical prote...	[more]
KAA0045366.1	2.9e-41	86.32	60S acidic ribosomal protein P1-like isoform X1 [Cucumis melo var. makuwa]	[more]

BLAST of CaUC10G186850 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P52855	9.6e-32	69.75	60S acidic ribosomal protein P1 OS=Zea mays OX=4577 GN=RPP1A PE=1 SV=1	[more]
Q8LCW9	1.2e-29	63.33	60S acidic ribosomal protein P1-1 OS=Arabidopsis thaliana OX=3702 GN=RPP1A PE=3 ...	[more]
Q8LEQ0	2.6e-29	61.98	60S acidic ribosomal protein P1-3 OS=Arabidopsis thaliana OX=3702 GN=RPP1C PE=1 ...	[more]
O23095	1.1e-27	61.48	60S acidic ribosomal protein P1-2 OS=Arabidopsis thaliana OX=3702 GN=RPP1B PE=1 ...	[more]
P29763	2.8e-23	57.85	60S acidic ribosomal protein P1 OS=Chlamydomonas reinhardtii OX=3055 PE=3 SV=1	[more]

BLAST of CaUC10G186850 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C0X1	4.7e-42	87.18	60S acidic ribosomal protein P1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0LTV1	1.1e-41	86.32	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G000010 PE=3 SV=1	[more]
A0A5A7TTB2	1.4e-41	86.32	60S acidic ribosomal protein P1-like isoform X1 OS=Cucumis melo var. makuwa OX=1...	[more]
A0A6J1CGB2	1.2e-40	85.00	60S acidic ribosomal protein P1-like OS=Momordica charantia OX=3673 GN=LOC111011...	[more]
A0A6J1JAB2	5.8e-40	77.94	60S acidic ribosomal protein P1 OS=Cucurbita maxima OX=3661 GN=LOC111482693 PE=3...	[more]

BLAST of CaUC10G186850 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G01100.1	8.3e-31	63.33	60S acidic ribosomal protein family	[more]
AT1G01100.2	8.3e-31	63.33	60S acidic ribosomal protein family	[more]
AT1G01100.4	8.3e-31	63.33	60S acidic ribosomal protein family	[more]
AT5G47700.1	1.8e-30	61.98	60S acidic ribosomal protein family	[more]
AT5G47700.2	1.8e-30	61.98	60S acidic ribosomal protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF00428	Ribosomal_60s	coord: 56..150 e-value: 1.1E-18 score: 67.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 117..151
None	No IPR available	PANTHER	PTHR45696	60S ACIDIC RIBOSOMAL PROTEIN P1	coord: 35..151
None	No IPR available	CDD	cd05831	Ribosomal_P1	coord: 50..150 e-value: 5.62742E-32 score: 108.178
IPR038716	Ribosomal protein P1/P2, N-terminal domain	GENE3D	1.10.10.1410		coord: 35..97 e-value: 4.1E-30 score: 105.4
IPR027534	Ribosomal protein L12/P1/P2 family	HAMAP	MF_01478	Ribosomal_L12_arch	coord: 40..151 score: 13.926057

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC10G186850.1	CaUC10G186850.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032147	activation of protein kinase activity
biological_process	GO:0002181	cytoplasmic translation
biological_process	GO:0006414	translational elongation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0030295	protein kinase activator activity
molecular_function	GO:0043021	ribonucleoprotein complex binding
molecular_function	GO:0003735	structural constituent of ribosome