CaUC10G186530 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC10G186530
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	agamous-like MADS-box protein AGL14
Location	Ciama_Chr10: 13479012 .. 13479773 (-)
RNA-Seq Expression	CaUC10G186530
Synteny	CaUC10G186530

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAGAGGAAAATTGAGTCTGAATCTGATTCCAAATCGGAAATCTCGAATCTCAACCTTCAAGAAGAGGAAGAACAGTTTGATGAAGAAGGCTTACGAGCTCTCTACCCTTTGCGATGTTCGGACTTGCGTTCTCATCCATGGCCCTGCTTCTTCGTCGACTGAAGATCCTTCTACCCAATCGGAGCTGGAATTTCACTCTTGGCCTTCCAATCGCGCCGACCTCGAAGCTATGATCCGCGCCTACAGGACCACCTCCTCCTGTAATTTCCAGAACCCCAAGTGTTTCAGTATGACTGATTTTTTCTTGGACCGGAAGAGGAAAATCGAATCGGAGACGTGTAAGCTTCGTCAGAAAGTTGATGACGTTATGTGCCCTAAGTGGGACGAGCGGCTCGAGCTTATGTCGGAACACGAATTGAGAGAGTTCATGGAAGGACTGAATGTGAAAATTGAAGCTGCCAATGGAATGATCGATTTGATGGAAGCCGATTACGAAGATCTGTTTGGCCAGCTGTGTTCGGAAAATTCAGTTCAAATGGGAGGGGATTCCAATCCTACTACTCCACTGCCGAATTGGGCTAGCCCTAATGAAGAAGAAGTGGCGATGGATGAGTTCAATAATAGTAGGTATCTTCAAATGGTGTTGGAGGAAGAACAAGAAGTCAACTACATGGTTCATTATGCAAATCTGATGAACGCTGAGTTTGATTATTACAATAATATTGAGCATTTGATGATTCCCACCGGTAACCTGTAA

mRNA sequence

ATGGGAAGAGGAAAATTGAGTCTGAATCTGATTCCAAATCGGAAATCTCGAATCTCAACCTTCAAGAAGAGGAAGAACAGTTTGATGAAGAAGGCTTACGAGCTCTCTACCCTTTGCGATGTTCGGACTTGCGTTCTCATCCATGGCCCTGCTTCTTCGTCGACTGAAGATCCTTCTACCCAATCGGAGCTGGAATTTCACTCTTGGCCTTCCAATCGCGCCGACCTCGAAGCTATGATCCGCGCCTACAGGACCACCTCCTCCTGTAATTTCCAGAACCCCAAGTGTTTCAGTATGACTGATTTTTTCTTGGACCGGAAGAGGAAAATCGAATCGGAGACGTGTAAGCTTCGTCAGAAAGTTGATGACGTTATGTGCCCTAAGTGGGACGAGCGGCTCGAGCTTATGTCGGAACACGAATTGAGAGAGTTCATGGAAGGACTGAATGTGAAAATTGAAGCTGCCAATGGAATGATCGATTTGATGGAAGCCGATTACGAAGATCTGTTTGGCCAGCTGTGTTCGGAAAATTCAGTTCAAATGGGAGGGGATTCCAATCCTACTACTCCACTGCCGAATTGGGCTAGCCCTAATGAAGAAGAAGTGGCGATGGATGAGTTCAATAATAGTAGGTATCTTCAAATGGTGTTGGAGGAAGAACAAGAAGTCAACTACATGGTTCATTATGCAAATCTGATGAACGCTGAGTTTGATTATTACAATAATATTGAGCATTTGATGATTCCCACCGGTAACCTGTAA

Coding sequence (CDS)

ATGGGAAGAGGAAAATTGAGTCTGAATCTGATTCCAAATCGGAAATCTCGAATCTCAACCTTCAAGAAGAGGAAGAACAGTTTGATGAAGAAGGCTTACGAGCTCTCTACCCTTTGCGATGTTCGGACTTGCGTTCTCATCCATGGCCCTGCTTCTTCGTCGACTGAAGATCCTTCTACCCAATCGGAGCTGGAATTTCACTCTTGGCCTTCCAATCGCGCCGACCTCGAAGCTATGATCCGCGCCTACAGGACCACCTCCTCCTGTAATTTCCAGAACCCCAAGTGTTTCAGTATGACTGATTTTTTCTTGGACCGGAAGAGGAAAATCGAATCGGAGACGTGTAAGCTTCGTCAGAAAGTTGATGACGTTATGTGCCCTAAGTGGGACGAGCGGCTCGAGCTTATGTCGGAACACGAATTGAGAGAGTTCATGGAAGGACTGAATGTGAAAATTGAAGCTGCCAATGGAATGATCGATTTGATGGAAGCCGATTACGAAGATCTGTTTGGCCAGCTGTGTTCGGAAAATTCAGTTCAAATGGGAGGGGATTCCAATCCTACTACTCCACTGCCGAATTGGGCTAGCCCTAATGAAGAAGAAGTGGCGATGGATGAGTTCAATAATAGTAGGTATCTTCAAATGGTGTTGGAGGAAGAACAAGAAGTCAACTACATGGTTCATTATGCAAATCTGATGAACGCTGAGTTTGATTATTACAATAATATTGAGCATTTGATGATTCCCACCGGTAACCTGTAA

Protein sequence

MGRGKLSLNLIPNRKSRISTFKKRKNSLMKKAYELSTLCDVRTCVLIHGPASSSTEDPSTQSELEFHSWPSNRADLEAMIRAYRTTSSCNFQNPKCFSMTDFFLDRKRKIESETCKLRQKVDDVMCPKWDERLELMSEHELREFMEGLNVKIEAANGMIDLMEADYEDLFGQLCSENSVQMGGDSNPTTPLPNWASPNEEEVAMDEFNNSRYLQMVLEEEQEVNYMVHYANLMNAEFDYYNNIEHLMIPTGNL

Homology

[Close]

BLAST of CaUC10G186530 vs. NCBI nr
Match: XP_038887059.1 (agamous-like MADS-box protein AGL82, partial [Benincasa hispida])

HSP 1 Score: 334.0 bits (855), Expect = 1.2e-87
Identity = 177/240 (73.75%), Postives = 200/240 (83.33%), Query Frame = 0


Query: 1   MGRGKLSLNLIPNRKSRISTFKKRKNSLMKKAYELSTLCDVRTCVLIHGPASSSTEDPST 60
           MGRGKLSLNLIPNRKSRISTFKKRKNSLMKKAYELSTLCDV+TCVL+HGPAS  TEDPS 
Sbjct: 1   MGRGKLSLNLIPNRKSRISTFKKRKNSLMKKAYELSTLCDVQTCVLVHGPASLPTEDPS- 60

Query: 61  QSELEFHSWPSNRADLEAMIRAYRTTSSCNFQNPKCFSMTDFFLDRKRKIESETCKLRQK 120
           QS+LEFH+WPS+R  LEAMIRAY+TT SCNFQ  KCF +TD+F DRKRKIESETCKLR+K
Sbjct: 61  QSDLEFHTWPSDRTHLEAMIRAYKTTRSCNFQKCKCFGLTDYFSDRKRKIESETCKLREK 120

Query: 121 VDDVMCPKWDERLELMSEHELREFMEGLNVKIEAANGMIDLME-ADYEDLFGQLCSENSV 180
               MCPKWDE L+ +SEHELREFMEGL+ KIEAANGMID ME AD+E+LFG+LCSENSV
Sbjct: 121 ---FMCPKWDEWLDRLSEHELREFMEGLDAKIEAANGMIDFMELADHENLFGELCSENSV 180

Query: 181 QMGGDSNPTTPLPN-------WASPNEEEV-AMDEFNNSRYLQMVLEEEQEVNYMVHYAN 232
           QMG DS P   +P+        A+  EE+V A+DE +N RYLQM+L EE+E NYM HYAN
Sbjct: 181 QMGEDSIPQVLIPSVDDLFATGANHTEEDVMALDEIDNIRYLQMLLGEEEEDNYMAHYAN 236

[Close]

BLAST of CaUC10G186530 vs. NCBI nr
Match: XP_038887053.1 (agamous-like MADS-box protein AGL82, partial [Benincasa hispida])

HSP 1 Score: 297.4 bits (760), Expect = 1.2e-76
Identity = 152/194 (78.35%), Postives = 169/194 (87.11%), Query Frame = 0


Query: 1   MGRGKLSLNLIPNRKSRISTFKKRKNSLMKKAYELSTLCDVRTCVLIHGPASSSTEDPST 60
           MGRGKLSLNLIPNRKSRISTFKKRKNSLMKKAYELSTLCDV+TCVL+HGPAS  TEDPS 
Sbjct: 1   MGRGKLSLNLIPNRKSRISTFKKRKNSLMKKAYELSTLCDVQTCVLVHGPASLPTEDPS- 60

Query: 61  QSELEFHSWPSNRADLEAMIRAYRTTSSCNFQNPKCFSMTDFFLDRKRKIESETCKLRQK 120
           QS+ EFH+WPS+R  LEAMIRAY+TT SCNFQ  KCF +TD+F DRKRKIESETCKLR+K
Sbjct: 61  QSDPEFHTWPSDRTHLEAMIRAYKTTRSCNFQKCKCFGLTDYFSDRKRKIESETCKLREK 120

Query: 121 VDDVMCPKWDERLELMSEHELREFMEGLNVKIEAANGMIDLME-ADYEDLFGQLCSENSV 180
               MCPKWDE L+ +SEHELREFMEGL+ KIEAANGMID ME AD+E+LFG+LCSENSV
Sbjct: 121 ---FMCPKWDEWLDRLSEHELREFMEGLDAKIEAANGMIDFMELADHENLFGELCSENSV 180

Query: 181 QMGGDSNPTTPLPN 194
           QMG DS P   +P+
Sbjct: 181 QMGEDSIPQVLIPS 190

[Close]

BLAST of CaUC10G186530 vs. NCBI nr
Match: XP_022935361.1 (agamous-like MADS-box protein AGL14 [Cucurbita moschata])

HSP 1 Score: 264.2 bits (674), Expect = 1.1e-66
Identity = 152/266 (57.14%), Postives = 187/266 (70.30%), Query Frame = 0


Query: 1   MGRGKLSLNLIPNRKSRISTFKKRKNSLMKKAYELSTLCDVRTCVLIHGPASSSTEDPST 60
           M RGKLS NLI NRKSR STFK+RKNSLMKKAYELSTLCDVRTCVLI+GP  +  EDPS 
Sbjct: 1   MVRGKLSFNLIRNRKSRCSTFKQRKNSLMKKAYELSTLCDVRTCVLINGPGFAPDEDPSL 60

Query: 61  QSELEFHSWPSNRADLEAMIRAYRTTSSCNFQNPKCFSMTDFFLDRKRKIESETCKLRQK 120
            S +EFH+WPSNR+++E MI AY+   +CNFQ  KCF ++D+F DRKRK+ +E CK R+K
Sbjct: 61  -SSVEFHTWPSNRSEVEHMIHAYK-NGNCNFQKRKCFDLSDYFSDRKRKLVTEMCKHREK 120

Query: 121 VDDVMCPKWDERLELMSEHELREFMEGLNVKIEAANGMIDLMEADYEDLFGQL-CS--EN 180
           V  +M P WDERL+ +SE +LREFM GL+ +IEAA  M+D M+AD E+LFG   C   EN
Sbjct: 121 VGKIMWPDWDERLDCLSEQQLREFMNGLDSRIEAAGRMVDFMDADNENLFGMFSCEEYEN 180

Query: 181 SVQMGGDSNPTTPLP-----------NWASPNEEEVAMDEFNNSRYLQMVLEEEQEVNYM 240
            VQMGGDS  +TP+P           N  +PN+ E+      N   L+ +LE+E E NYM
Sbjct: 181 VVQMGGDS--STPVPPLVELESPDSLNSPNPNKHEIGC----NFENLEFLLEDEDE-NYM 240

Query: 241 VHYANLMNAEFDYYNNIEHLMIPTGN 253
             YANLMN EFD  N+IE   + TGN
Sbjct: 241 ALYANLMNDEFDECNDIEQ-WLRTGN 256

[Close]

BLAST of CaUC10G186530 vs. NCBI nr
Match: XP_023528957.1 (agamous-like MADS-box protein AGL14 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 260.4 bits (664), Expect = 1.6e-65
Identity = 153/267 (57.30%), Postives = 186/267 (69.66%), Query Frame = 0


Query: 1   MGRGKLSLNLIPNRKSRISTFKKRKNSLMKKAYELSTLCDVRTCVLIHGPASSSTEDPST 60
           M RGKLS NLI NRKSR STFK+RKNSLMKKAYELSTLCDVRTCVLI+GP  +  EDPS 
Sbjct: 1   MVRGKLSFNLIRNRKSRCSTFKQRKNSLMKKAYELSTLCDVRTCVLINGPGFAPDEDPSL 60

Query: 61  QSELEFHSWPSNRADLEAMIRAYRTTSSCNFQNPKCFSMTDFFLDRKRKIESETCKLRQK 120
            S +EFH+WPSNR+++E MI AY+   +CN Q  KCF ++D+F DRKRK+ +E CK R+K
Sbjct: 61  -SSVEFHTWPSNRSEVEHMIHAYK-NGNCNLQKRKCFDLSDYFSDRKRKLVTEMCKHREK 120

Query: 121 VDDVMCPKWDERLELMSEHELREFMEGLNVKIEAANGMIDLMEADYEDLFGQL-CS--EN 180
           V  +M P WDERL+ +SE +LREFM GL+ +IEAA  MID M+AD E+LFG   C   EN
Sbjct: 121 VGKIMWPDWDERLDCLSEQQLREFMNGLDSRIEAAGRMIDFMDADNENLFGMFSCEEYEN 180

Query: 181 SVQMGGDSN-PTTPL-----------PNWASPNEEEVAMDEFNNSRYLQMVLEEEQEVNY 240
            VQMGGDS+ P  PL           PN  +PNE+E+      N   L+ +LE+E E NY
Sbjct: 181 VVQMGGDSSTPVPPLVELESPDSLNTPN-PNPNEDEIGC----NFENLEFLLEDEDE-NY 240

Query: 241 MVHYANLMNAEFDYYNNIEHLMIPTGN 253
           M  YANLMN E D  N+IE   + TGN
Sbjct: 241 MALYANLMNDELDECNDIEQ-WLRTGN 258

[Close]

BLAST of CaUC10G186530 vs. NCBI nr
Match: XP_022983430.1 (agamous-like MADS-box protein AGL14 [Cucurbita maxima])

HSP 1 Score: 259.2 bits (661), Expect = 3.6e-65
Identity = 153/269 (56.88%), Postives = 186/269 (69.14%), Query Frame = 0


Query: 1   MGRGKLSLNLIPNRKSRISTFKKRKNSLMKKAYELSTLCDVRTCVLIHGPASSSTEDPST 60
           M RGKLS NLI NRKSR STFK+RKNSLMKKAYELSTLCDVRTCVLI+GP  +  EDPS 
Sbjct: 1   MVRGKLSFNLIRNRKSRCSTFKQRKNSLMKKAYELSTLCDVRTCVLINGPGFAPDEDPSL 60

Query: 61  QSELEFHSWPSNRADLEAMIRAYRTTSSCNFQNPKCFSMTDFFLDRKRKIESETCKLRQK 120
            S +EFH+WPSNR+++E MI AY+   +CN Q  KCF ++D+F DRKRK+ +E CK R+K
Sbjct: 61  -SSVEFHTWPSNRSEVEHMIHAYK-NGNCNLQKRKCFDLSDYFSDRKRKLVTEMCKHREK 120

Query: 121 VDDVMCPKWDERLELMSEHELREFMEGLNVKIEAANGMIDLMEADYEDLFGQL-CS--EN 180
           V  +M P WDERL+ +SE +LREFM GL+ +IEAA  MID M+AD E+LFG   C   EN
Sbjct: 121 VGKIMWPDWDERLDCLSEQQLREFMNGLDSRIEAAGRMIDFMDADNENLFGMFSCEEYEN 180

Query: 181 SVQMGGDSNP--------------TTPLPNWASPNEEEVAMDEFNNSRYLQMVLEEEQEV 240
            VQMGGDS+                +P PN   P+E+E+  + F N  YL   LE+E E 
Sbjct: 181 VVQMGGDSSTPVLSLVELESTDSLNSPNPN---PDEDEIGCN-FENLEYL---LEDEDE- 240

Query: 241 NYMVHYANLMNAEFDYYNNIEHLMIPTGN 253
           NYM  YANLMN EFD  N+IE   + TGN
Sbjct: 241 NYMALYANLMNDEFDECNDIEQ-WLRTGN 258

[Close]

BLAST of CaUC10G186530 vs. ExPASy Swiss-Prot
Match: Q9FIM0 (Agamous-like MADS-box protein AGL82 OS=Arabidopsis thaliana OX=3702 GN=AGL82 PE=1 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 2.4e-11
Identity = 48/150 (32.00%), Postives = 81/150 (54.00%), Query Frame = 0


Query: 6   LSLNLIPNRKSRISTFKKRKNSLMKKAYELSTLCDVRTCVLIHGPASSSTEDPSTQSELE 65
           + L  I N K+RI+T+KKRK SL KKA E STLC V TC++++GP + +T+   ++ E+ 
Sbjct: 6   VDLQRIANDKTRITTYKKRKASLYKKAQEFSTLCGVETCLIVYGP-TKATDVVISEPEI- 65

Query: 66  FHSWPSNRADLEAMIRAYRTTSSCNFQNPKCFSMTDFFLDRKRKIESETCKLRQKVDDVM 125
              WP +   + A+IR Y+ T S + +     +  + F++   K      K R K ++  
Sbjct: 66  ---WPKDETKVRAIIRKYKDTVSTSCRKE---TNVETFVNDVGKGNEVVTKKRVKREN-K 125

Query: 126 CPKWDERLELMSEHELREFMEGLNVKIEAA 156
              W+E+L+  S  +L      ++ K+  A
Sbjct: 126 YSSWEEKLDKCSREQLHGIFCAVDSKLNEA 146

[Close]

BLAST of CaUC10G186530 vs. ExPASy Swiss-Prot
Match: Q9FJK3 (Agamous-like MADS-box protein AGL80 OS=Arabidopsis thaliana OX=3702 GN=AGL80 PE=1 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 4.2e-08
Identity = 43/123 (34.96%), Postives = 63/123 (51.22%), Query Frame = 0


Query: 1   MGRGKLSLNLIPNRKSRISTFKKRKNSLMKKAYELSTLCDVRTCVLIHGPASSSTEDPST 60
           M R K+ L  I N  SR +TFKKRK  LMKK +ELSTLC +  C +I+ P  ++ E    
Sbjct: 1   MTRKKVKLAYISNDSSRKATFKKRKKGLMKKVHELSTLCGITACAIIYSPYDTNPE---- 60

Query: 61  QSELEFHSWPSNRADLEAMIRAYRTTSSCNFQNPKCFSMTDFFLDRKRKIESETCKLRQK 120
                   WPSN + ++ ++  +RT    + Q+ K      F    K++I   T  LR++
Sbjct: 61  -------VWPSN-SGVQRVVSEFRTLPEMD-QHKKMVDQEGFL---KQRIAKATETLRRQ 107

Query: 121 VDD 124
             D
Sbjct: 121 RKD 107

[Close]

BLAST of CaUC10G186530 vs. ExPASy Swiss-Prot
Match: P29386 (Agamous-like MADS-box protein AGL6 OS=Arabidopsis thaliana OX=3702 GN=AGL6 PE=1 SV=2)

HSP 1 Score: 55.8 bits (133), Expect = 8.0e-07
Identity = 38/114 (33.33%), Postives = 58/114 (50.88%), Query Frame = 0


Query: 1   MGRGKLSLNLIPNRKSRISTFKKRKNSLMKKAYELSTLCDVRTCVLIHGPASSSTEDPST 60
           MGRG++ +  I N+ +R  TF KR+N L+KKAYELS LCD    ++I           S+
Sbjct: 1   MGRGRVEMKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIF----------SS 60

Query: 61  QSEL-EFHSWPSNRADLEAMIRAYRTTSSCNFQNPKCFSMTDFFLDRKRKIESE 114
           + +L EF S       +E+ I  Y    +C+  N K    T  +     K++S+
Sbjct: 61  RGKLYEFGS-----VGIESTIERYNRCYNCSLSNNKPEETTQSWCQEVTKLKSK 99

[Close]

BLAST of CaUC10G186530 vs. ExPASy Swiss-Prot
Match: Q9C6V4 (Agamous-like MADS-box protein AGL92 OS=Arabidopsis thaliana OX=3702 GN=AGL92 PE=1 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.8e-06
Identity = 28/63 (44.44%), Postives = 40/63 (63.49%), Query Frame = 0


Query: 3  RGKLSLNLIPNRKSRISTFKKRKNSLMKKAYELSTLCDVRTCVLIHGPASSSTEDPSTQS 62
          R K  L LIP+R  R +TF+KR   + KK +EL+TLCD++ C +I+ P  + T  PST+ 
Sbjct: 2  RTKTKLVLIPDRHFRRATFRKRNAGIRKKLHELTTLCDIKACAVIYSPFENPTVWPSTEG 61

Query: 63 ELE 66
            E
Sbjct: 62 VQE 64

[Close]

BLAST of CaUC10G186530 vs. ExPASy Swiss-Prot
Match: Q07474 (Floral homeotic protein PMADS 2 OS=Petunia hybrida OX=4102 GN=PMADS2 PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.3e-06
Identity = 47/189 (24.87%), Postives = 87/189 (46.03%), Query Frame = 0


Query: 1   MGRGKLSLNLIPNRKSRISTFKKRKNSLMKKAYELSTLCDVRTCVLIHGPASSSTEDPST 60
           MGRGK+ +  I N  +R  T+ KR+N ++KKA E++ LCD +  ++I G +         
Sbjct: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAKVSLIIFGNSG-------- 60

Query: 61  QSELEFHSWPSNRADLEAMIRAYRTTSSCNFQNPKCFSMTDFFLDRKRKIESETCKLRQ- 120
               + H + S    L  M+  Y+ TS     + K  ++++     K++ ++   KLR  
Sbjct: 61  ----KMHEYCSPSTTLPDMLDGYQKTSGRRLWDAKHENLSNEIDRIKKENDNMQVKLRHL 120

Query: 121 KVDDVMCPKWDERLELMSEHELREFMEGLNVKIEAANGMI----DLMEADYEDLFGQLCS 180
           K +D+      E + L  E  L   +  ++ K      M+     ++E +++ L   L  
Sbjct: 121 KGEDINSLNHKELMVL--EEGLTNGLSSISAKQSEILRMVRKNDQILEEEHKQLQYALHQ 175

Query: 181 ENSVQMGGD 185
           +    MGG+
Sbjct: 181 KEMAAMGGN 175

[Close]

BLAST of CaUC10G186530 vs. ExPASy TrEMBL
Match: A0A6J1F4C8 (agamous-like MADS-box protein AGL14 OS=Cucurbita moschata OX=3662 GN=LOC111442271 PE=4 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 5.5e-67
Identity = 152/266 (57.14%), Postives = 187/266 (70.30%), Query Frame = 0


Query: 1   MGRGKLSLNLIPNRKSRISTFKKRKNSLMKKAYELSTLCDVRTCVLIHGPASSSTEDPST 60
           M RGKLS NLI NRKSR STFK+RKNSLMKKAYELSTLCDVRTCVLI+GP  +  EDPS 
Sbjct: 1   MVRGKLSFNLIRNRKSRCSTFKQRKNSLMKKAYELSTLCDVRTCVLINGPGFAPDEDPSL 60

Query: 61  QSELEFHSWPSNRADLEAMIRAYRTTSSCNFQNPKCFSMTDFFLDRKRKIESETCKLRQK 120
            S +EFH+WPSNR+++E MI AY+   +CNFQ  KCF ++D+F DRKRK+ +E CK R+K
Sbjct: 61  -SSVEFHTWPSNRSEVEHMIHAYK-NGNCNFQKRKCFDLSDYFSDRKRKLVTEMCKHREK 120

Query: 121 VDDVMCPKWDERLELMSEHELREFMEGLNVKIEAANGMIDLMEADYEDLFGQL-CS--EN 180
           V  +M P WDERL+ +SE +LREFM GL+ +IEAA  M+D M+AD E+LFG   C   EN
Sbjct: 121 VGKIMWPDWDERLDCLSEQQLREFMNGLDSRIEAAGRMVDFMDADNENLFGMFSCEEYEN 180

Query: 181 SVQMGGDSNPTTPLP-----------NWASPNEEEVAMDEFNNSRYLQMVLEEEQEVNYM 240
            VQMGGDS  +TP+P           N  +PN+ E+      N   L+ +LE+E E NYM
Sbjct: 181 VVQMGGDS--STPVPPLVELESPDSLNSPNPNKHEIGC----NFENLEFLLEDEDE-NYM 240

Query: 241 VHYANLMNAEFDYYNNIEHLMIPTGN 253
             YANLMN EFD  N+IE   + TGN
Sbjct: 241 ALYANLMNDEFDECNDIEQ-WLRTGN 256

[Close]

BLAST of CaUC10G186530 vs. ExPASy TrEMBL
Match: A0A6J1J5U6 (agamous-like MADS-box protein AGL14 OS=Cucurbita maxima OX=3661 GN=LOC111482037 PE=4 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 1.8e-65
Identity = 153/269 (56.88%), Postives = 186/269 (69.14%), Query Frame = 0


Query: 1   MGRGKLSLNLIPNRKSRISTFKKRKNSLMKKAYELSTLCDVRTCVLIHGPASSSTEDPST 60
           M RGKLS NLI NRKSR STFK+RKNSLMKKAYELSTLCDVRTCVLI+GP  +  EDPS 
Sbjct: 1   MVRGKLSFNLIRNRKSRCSTFKQRKNSLMKKAYELSTLCDVRTCVLINGPGFAPDEDPSL 60

Query: 61  QSELEFHSWPSNRADLEAMIRAYRTTSSCNFQNPKCFSMTDFFLDRKRKIESETCKLRQK 120
            S +EFH+WPSNR+++E MI AY+   +CN Q  KCF ++D+F DRKRK+ +E CK R+K
Sbjct: 61  -SSVEFHTWPSNRSEVEHMIHAYK-NGNCNLQKRKCFDLSDYFSDRKRKLVTEMCKHREK 120

Query: 121 VDDVMCPKWDERLELMSEHELREFMEGLNVKIEAANGMIDLMEADYEDLFGQL-CS--EN 180
           V  +M P WDERL+ +SE +LREFM GL+ +IEAA  MID M+AD E+LFG   C   EN
Sbjct: 121 VGKIMWPDWDERLDCLSEQQLREFMNGLDSRIEAAGRMIDFMDADNENLFGMFSCEEYEN 180

Query: 181 SVQMGGDSNP--------------TTPLPNWASPNEEEVAMDEFNNSRYLQMVLEEEQEV 240
            VQMGGDS+                +P PN   P+E+E+  + F N  YL   LE+E E 
Sbjct: 181 VVQMGGDSSTPVLSLVELESTDSLNSPNPN---PDEDEIGCN-FENLEYL---LEDEDE- 240

Query: 241 NYMVHYANLMNAEFDYYNNIEHLMIPTGN 253
           NYM  YANLMN EFD  N+IE   + TGN
Sbjct: 241 NYMALYANLMNDEFDECNDIEQ-WLRTGN 258

[Close]

BLAST of CaUC10G186530 vs. ExPASy TrEMBL
Match: A0A6J1CQM2 (uncharacterized protein LOC111013282 OS=Momordica charantia OX=3673 GN=LOC111013282 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 1.2e-34
Identity = 88/163 (53.99%), Postives = 109/163 (66.87%), Query Frame = 0


Query: 1   MGRGKLSLNLIPNRKSRISTFKKRKNSLMKKAYELSTLCDVRTCVLIHGPASSSTEDPST 60
           MGRGKLSL LI + KSR +TF+KR  SLMKKA+ELSTLCDVRTCVLIHGPA     D   
Sbjct: 1   MGRGKLSLKLISSHKSRTATFRKRTKSLMKKAFELSTLCDVRTCVLIHGPAPPQDGD--- 60

Query: 61  QSELEFHSWPSNRADLEAMIRAYRTTSSCNFQNPKCFSMTDFFLDRKRKIESETCKLRQK 120
           +S +E H+WP NR ++E +IRAY+ T+     + K F + DFF  R +KIE E  K    
Sbjct: 61  RSVVESHTWPPNREEIEGIIRAYK-TNYLRKPSMKSFGLYDFFSGRMKKIEKERAKFS-- 120

Query: 121 VDDVMCPKWDERLELMSEHELREFMEGLNVKIEAANGMIDLME 164
            +++    WDERL  +SE +LR FM+ L  KIEAA GMI  ME
Sbjct: 121 -EEIKYAGWDERLNCLSEQQLRLFMDNLGSKIEAAEGMIGFME 156

[Close]

BLAST of CaUC10G186530 vs. ExPASy TrEMBL
Match: A0A6J1F370 (agamous-like MADS-box protein AGL6 OS=Cucurbita moschata OX=3662 GN=LOC111441717 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 3.0e-33
Identity = 96/224 (42.86%), Postives = 129/224 (57.59%), Query Frame = 0


Query: 1   MGRGKLSLNLIPNRKSRISTFKKRKNSLMKKAYELSTLCDVRTCVLIHGPASSSTEDPST 60
           MGRG LSL LI N KSR +TF+KRK SLMKKAYELSTLCDV+TCV+I             
Sbjct: 1   MGRGTLSLKLISNPKSRRTTFQKRKKSLMKKAYELSTLCDVQTCVVI------------- 60

Query: 61  QSELEFHSWPSNRADLEAMIRAYRTTSSCNFQNPKCFSMTDFFLDRKRKIESETCKLRQK 120
            +  EF +WPS+R  +EAMIR+Y++ S C       + +  FF DRK KI +ET KLR+K
Sbjct: 61  -ASEEFETWPSDRTQVEAMIRSYKSQSFCKQSAKSSYDLNQFFSDRKNKIVTETSKLREK 120

Query: 121 VDDVMCPKWDERLELMSEHELREFMEGLNVKIEAANGMIDLMEADYEDLFGQLCSENSVQ 180
           V        D  L+ +SEH+L+  M  L+ KI  A+ MI+ MEADY+ L      E +V+
Sbjct: 121 VQKSKDTNSDHCLDSLSEHQLKALMATLDSKIGVADSMIEFMEADYDYLI-----EGAVE 180

Query: 181 MGG-DSNPTTPLPNWASPNEEEVAMDEFNNSRYLQMVLEEEQEV 224
           +   D    +PL   ASP   E+ + E         ++E + E+
Sbjct: 181 ISSIDKQIFSPLETEASP---ELNISELGMEANYDYLIEGDTEI 202

[Close]

BLAST of CaUC10G186530 vs. ExPASy TrEMBL
Match: A0A6J1D6T5 (floral homeotic protein DEFICIENS-like OS=Momordica charantia OX=3673 GN=LOC111017467 PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 4.4e-32
Identity = 80/168 (47.62%), Postives = 112/168 (66.67%), Query Frame = 0


Query: 1   MGRGKLSLNLIPNRKSRISTFKKRKNSLMKKAYELSTLCDVRTCVLIHGPASSSTEDPST 60
           MGRGKLS+ +IPN KSR +TF KRK SLM+KAYELSTLCDVRTCV + GP      + + 
Sbjct: 1   MGRGKLSMTMIPNEKSRKTTFFKRKKSLMRKAYELSTLCDVRTCVFVCGP------NQND 60

Query: 61  QSELEFHSWPSNRADLEAMIRAYRTTSSCNFQNPKCFSMTDFFLDRKRKIESETCKLRQK 120
           QS +E H+WP +R D++ MI +YR  +  + +  K F + DFF +RK+KIES+  KL + 
Sbjct: 61  QSSVEVHTWPPSRDDVDDMIASYR-ANCLHKRAGKPFDLLDFFSERKKKIESDISKLHKD 120

Query: 121 VDDVMCPKWDERLELMSEHELREFMEGLNVKIEAANGMIDLMEADYED 169
           +     PKWDERL+ + E +LR  ME L+ K++A    I++   + E+
Sbjct: 121 LARAKFPKWDERLDYLLEDQLRVLMEELDSKLDATKRKIEIAMENLEE 161

[Close]

BLAST of CaUC10G186530 vs. TAIR 10
Match: AT5G55690.1 (MADS-box transcription factor family protein )

HSP 1 Score: 76.3 bits (186), Expect = 4.1e-14
Identity = 49/155 (31.61%), Postives = 80/155 (51.61%), Query Frame = 0


Query: 1   MGRGKLSLNLIPNRKSRISTFKKRKNSLMKKAYELSTLCDVRTCVLIHGPASSSTEDPST 60
           MGR  + +  I N K+RI+T+KKRK  L KKA E STLC V TCV+++GP+ +  E    
Sbjct: 1   MGRKMVKMTRITNEKTRITTYKKRKACLYKKASEFSTLCGVDTCVIVYGPSRAGDE---- 60

Query: 61  QSELEFHSWPSNRADLEAMIRAYRTTSSCNFQNPKCFSMTDFFLDRKRKIESETCKLRQK 120
              +E   WP + + +  ++  YR T+S +    K +++ +       K+E  T   +  
Sbjct: 61  -MVMEPELWPKDGSKVREILTKYRDTASSSC--TKTYTVQECLEKNNTKVEKPTIATKY- 120

Query: 121 VDDVMCPKWDERLELMSEHELREFMEGLNVKIEAA 156
                 P WD++L+  S ++L      +  KI+ A
Sbjct: 121 ------PTWDKKLDQCSLNDLYAVFMAVENKIQEA 141

[Close]

BLAST of CaUC10G186530 vs. TAIR 10
Match: AT5G58890.1 (AGAMOUS-like 82 )

HSP 1 Score: 70.9 bits (172), Expect = 1.7e-12
Identity = 48/150 (32.00%), Postives = 81/150 (54.00%), Query Frame = 0


Query: 6   LSLNLIPNRKSRISTFKKRKNSLMKKAYELSTLCDVRTCVLIHGPASSSTEDPSTQSELE 65
           + L  I N K+RI+T+KKRK SL KKA E STLC V TC++++GP + +T+   ++ E+ 
Sbjct: 6   VDLQRIANDKTRITTYKKRKASLYKKAQEFSTLCGVETCLIVYGP-TKATDVVISEPEI- 65

Query: 66  FHSWPSNRADLEAMIRAYRTTSSCNFQNPKCFSMTDFFLDRKRKIESETCKLRQKVDDVM 125
              WP +   + A+IR Y+ T S + +     +  + F++   K      K R K ++  
Sbjct: 66  ---WPKDETKVRAIIRKYKDTVSTSCRKE---TNVETFVNDVGKGNEVVTKKRVKREN-K 125

Query: 126 CPKWDERLELMSEHELREFMEGLNVKIEAA 156
              W+E+L+  S  +L      ++ K+  A
Sbjct: 126 YSSWEEKLDKCSREQLHGIFCAVDSKLNEA 146

[Close]

BLAST of CaUC10G186530 vs. TAIR 10
Match: AT5G48670.1 (AGAMOUS-like 80 )

HSP 1 Score: 60.1 bits (144), Expect = 3.0e-09
Identity = 43/123 (34.96%), Postives = 63/123 (51.22%), Query Frame = 0


Query: 1   MGRGKLSLNLIPNRKSRISTFKKRKNSLMKKAYELSTLCDVRTCVLIHGPASSSTEDPST 60
           M R K+ L  I N  SR +TFKKRK  LMKK +ELSTLC +  C +I+ P  ++ E    
Sbjct: 1   MTRKKVKLAYISNDSSRKATFKKRKKGLMKKVHELSTLCGITACAIIYSPYDTNPE---- 60

Query: 61  QSELEFHSWPSNRADLEAMIRAYRTTSSCNFQNPKCFSMTDFFLDRKRKIESETCKLRQK 120
                   WPSN + ++ ++  +RT    + Q+ K      F    K++I   T  LR++
Sbjct: 61  -------VWPSN-SGVQRVVSEFRTLPEMD-QHKKMVDQEGFL---KQRIAKATETLRRQ 107

Query: 121 VDD 124
             D
Sbjct: 121 RKD 107

[Close]

BLAST of CaUC10G186530 vs. TAIR 10
Match: AT5G26580.1 (AGAMOUS-like-34 )

HSP 1 Score: 58.5 bits (140), Expect = 8.8e-09
Identity = 29/50 (58.00%), Postives = 36/50 (72.00%), Query Frame = 0


Query: 1  MGRGKLSLNLIPNRKSRISTFKKRKNSLMKKAYELSTLCDVRTCVLIHGP 51
          MG  K+ L+LI N  SR ++F KRKN +MKK YELSTLC V+ C LI+ P
Sbjct: 1  MGMKKVKLSLIANEISRETSFMKRKNGIMKKLYELSTLCGVQACTLIYSP 50

[Close]

BLAST of CaUC10G186530 vs. TAIR 10
Match: AT1G24260.2 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 53.5 bits (127), Expect = 2.8e-07
Identity = 55/211 (26.07%), Postives = 94/211 (44.55%), Query Frame = 0


Query: 1   MGRGKLSLNLIPNRKSRISTFKKRKNSLMKKAYELSTLCDVRTCVLIHGPASSSTEDPST 60
           MGRG++ L  I N+ +R  TF KR+N L+KKAYELS LCD    ++I        E  S+
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  QSELEFHSWPSNRADLEAMIRAYRTTSSCNFQNPKCFSMTDFFLDRKRKIESETCKLRQK 120
            S                M+R       CN+  P+    +   L  +   + E  KL+++
Sbjct: 61  SS----------------MLRTLERYQKCNYGAPEPNVPSREALAVELSSQQEYLKLKER 120

Query: 121 VDDVMCPKWDERLELMSEHELREFMEGLNVKIEAANGMIDLMEADYEDLFGQLCS-ENSV 180
            D +   + +   E +     +E +E L  +++++   I  +   +  +  QL   ++  
Sbjct: 121 YDALQRTQRNLLGEDLGPLSTKE-LESLERQLDSSLKQIRALRTQF--MLDQLNDLQSKE 180

Query: 181 QMGGDSNPTTPL--------PNWASPNEEEV 203
           +M  ++N T  L        P   +PN+EEV
Sbjct: 181 RMLTETNKTLRLRLADGYQMPLQLNPNQEEV 192

The following BLAST results are available for this feature:

BLAST of CaUC10G186530 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038887059.1	1.2e-87	73.75	agamous-like MADS-box protein AGL82, partial [Benincasa hispida]	[more]
XP_038887053.1	1.2e-76	78.35	agamous-like MADS-box protein AGL82, partial [Benincasa hispida]	[more]
XP_022935361.1	1.1e-66	57.14	agamous-like MADS-box protein AGL14 [Cucurbita moschata]	[more]
XP_023528957.1	1.6e-65	57.30	agamous-like MADS-box protein AGL14 [Cucurbita pepo subsp. pepo]	[more]
XP_022983430.1	3.6e-65	56.88	agamous-like MADS-box protein AGL14 [Cucurbita maxima]	[more]

BLAST of CaUC10G186530 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FIM0	2.4e-11	32.00	Agamous-like MADS-box protein AGL82 OS=Arabidopsis thaliana OX=3702 GN=AGL82 PE=...	[more]
Q9FJK3	4.2e-08	34.96	Agamous-like MADS-box protein AGL80 OS=Arabidopsis thaliana OX=3702 GN=AGL80 PE=...	[more]
P29386	8.0e-07	33.33	Agamous-like MADS-box protein AGL6 OS=Arabidopsis thaliana OX=3702 GN=AGL6 PE=1 ...	[more]
Q9C6V4	1.8e-06	44.44	Agamous-like MADS-box protein AGL92 OS=Arabidopsis thaliana OX=3702 GN=AGL92 PE=...	[more]
Q07474	2.3e-06	24.87	Floral homeotic protein PMADS 2 OS=Petunia hybrida OX=4102 GN=PMADS2 PE=2 SV=1	[more]

BLAST of CaUC10G186530 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F4C8	5.5e-67	57.14	agamous-like MADS-box protein AGL14 OS=Cucurbita moschata OX=3662 GN=LOC11144227...	[more]
A0A6J1J5U6	1.8e-65	56.88	agamous-like MADS-box protein AGL14 OS=Cucurbita maxima OX=3661 GN=LOC111482037 ...	[more]
A0A6J1CQM2	1.2e-34	53.99	uncharacterized protein LOC111013282 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A6J1F370	3.0e-33	42.86	agamous-like MADS-box protein AGL6 OS=Cucurbita moschata OX=3662 GN=LOC111441717...	[more]
A0A6J1D6T5	4.4e-32	47.62	floral homeotic protein DEFICIENS-like OS=Momordica charantia OX=3673 GN=LOC1110...	[more]

BLAST of CaUC10G186530 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G55690.1	4.1e-14	31.61	MADS-box transcription factor family protein	[more]
AT5G58890.1	1.7e-12	32.00	AGAMOUS-like 82	[more]
AT5G48670.1	3.0e-09	34.96	AGAMOUS-like 80	[more]
AT5G26580.1	8.8e-09	58.00	AGAMOUS-like-34	[more]
AT1G24260.2	2.8e-07	26.07	K-box region and MADS-box transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 23..38 score: 69.15 coord: 38..59 score: 23.3 coord: 3..23 score: 40.51
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 1..60 e-value: 4.9E-17 score: 72.6
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 11..51 e-value: 1.2E-15 score: 56.7
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 1..47 score: 18.586269
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	3.40.1810.10		coord: 13..113 e-value: 9.7E-16 score: 59.6
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	55455	SRF-like	coord: 2..92
None	No IPR available	PANTHER	PTHR11945	MADS BOX PROTEIN	coord: 3..221
None	No IPR available	PANTHER	PTHR11945:SF176	AGAMOUS-LIKE MADS-BOX PROTEIN AGL82	coord: 3..221
None	No IPR available	CDD	cd00120	MADS	coord: 2..60 e-value: 1.22138E-21 score: 83.3321

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC10G186530.1	CaUC10G186530.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
molecular_function	GO:0000987	cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0003677	DNA binding