CaUC10G185500 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC10G185500
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
LocationCiama_Chr10: 9126995 .. 9127216 (+)
RNA-Seq ExpressionCaUC10G185500
SyntenyCaUC10G185500
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAATGTCGCTGCATGGGCAAACTGCTGGTCACAAAGTTCACCAGAAGCTGCTCGTCGTGGATAGTCCGTGCGATCTAGTGTTTATCGGAGGATGTTCGTTGGAGTGCAAAAGTCGCCTCGTTGGTGCTTCGATCGTGGTCTGTGCAATCGTGGTCAATGGCTTGGGGTTTTGCAACTTTGGCGGCTGTCTGCTTCGCTACTTCCATAAAAACCATTGA

mRNA sequence

ATGTCAATGTCGCTGCATGGGCAAACTGCTGGTCACAAAGTTCACCAGAAGCTGCTCGTCGTGGATAGTCCGTGCGATCTAGTGTTTATCGGAGGATGTTCGTTGGAGTGCAAAAGTCGCCTCGTTGGTGCTTCGATCGTGGTCTGTGCAATCGTGGTCAATGGCTTGGGGTTTTGCAACTTTGGCGGCTGTCTGCTTCGCTACTTCCATAAAAACCATTGA

Coding sequence (CDS)

ATGTCAATGTCGCTGCATGGGCAAACTGCTGGTCACAAAGTTCACCAGAAGCTGCTCGTCGTGGATAGTCCGTGCGATCTAGTGTTTATCGGAGGATGTTCGTTGGAGTGCAAAAGTCGCCTCGTTGGTGCTTCGATCGTGGTCTGTGCAATCGTGGTCAATGGCTTGGGGTTTTGCAACTTTGGCGGCTGTCTGCTTCGCTACTTCCATAAAAACCATTGA

Protein sequence

MSMSLHGQTAGHKVHQKLLVVDSPCDLVFIGGCSLECKSRLVGASIVVCAIVVNGLGFCNFGGCLLRYFHKNH
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001736Phospholipase D/TransphosphatidylasePROSITEPS50035PLDcoord: 10..39
score: 10.615199

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC10G185500.1CaUC10G185500.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003824 catalytic activity