CaUC10G184280 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC10G184280
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	reactive Intermediate Deaminase A, chloroplastic-like
Location	Ciama_Chr10: 6407940 .. 6410774 (-)
RNA-Seq Expression	CaUC10G184280
Synteny	CaUC10G184280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTGGTGTGCGGCTCGGACCTTTCACATGCCGGCGTTCGACGTCACTGCACTGCGCTCCAAGACTCCCTTGGTCGTCGGCGTCGGTTGCGTTTCGGTGGCCGGAACCACCTTGTGGCGATCTTCCTCAACTTCCAAGCCCCAAATACCCTTCGCATCCCTTGGCATTTCCACCAATACTAGTACGCTCTCACTTTTCTGCCTTTTCCTTCGCTTTTTGTTTGGTCGTCGATCAATTTTTTGTTACGATTTGTTGATTACTTTTTTCTGTTGCCATTCTCTCCTTTTGCCGAAATCTCGATGGATTTTGTAGGGTTTAGTTTGTGTTTCAGCTGAGTAGTTATTAAAATTTTGAAATAGGGCCTTTCTATGCGATTAGGTTTAAGCTTGGTGAGGGAATGTCGATTGGTGTTCTTCCCCTTTCTAAGTAAGAAAATTTGCAATCATCGGAAAATTATAGTAGTTTGTTCGAAATGCAGAGATAATTTTGAGTTCTTTTCATCTTGAATTTAGAAACCTACTTATCAAGTATTGAAGATGTTGTAGAATGGTATATTTCTCATAAAAGCTCCAGGGCGTTTGATGAGCGTGAATAATTAGTGAGGAACAAACTTAAGCACTGATATTTTAAATCTACAAAAATAATTGAAATGAAGATTTTTACGCGAAATTTAAAACTTGAATTTTATTACACAGCTTAAACAACTTATGAAAAAATGGGAGAGCTTTTTTCTTCTATAGTCTAGTTGGAGCGGAGCAAATAGTTCGTCTTTGAAGGCTCTTTTTTAGATATTGTAGAAGATAACTCTTCCTTGGGGGAACAATTGAATAGTTATTCTTTCCTAATTGTTTCTGTTGAATGTTTATAACTGATGCATAACCACTCGGTCCACCCCTTAATATCAACTTCTTGTGTAGCAGGTATCAAGGAAGCTGTTCAAACTGACAAGGCTCCAGCGGCATTAGGGCCATATTCTCAGGCTATCAAAGCCAACAACCTTCTCTTTGTGTCTGGTGTCCTAGGTCTAAATCCGGAGGTAGCTTCATCACTTTGTTATTGTTACTTTTTATTTGATTGTGCTTATGAGTAGATTAAGTGGGTTTTTGGATGCTGACCTGAGTATTGCTTGAAAGTTTGAATATTTTTCAATATTTGTAATGAATATTGAAAAAAGAAACATAAGGTTGAAGTGGTTTTCTGTGTGTGCGCACTTACGCATTATTAAGCTGCCTAATGGAATGTGCATTTTCATGTTCTATAATGTAGACAGGGAAATTCGTCTCAGATGATGTTGAAGACCAAACGGAGCAGGTATGTCCATTGATTATGGTGCCTGCTCGTATCATGTCCATGCAGATTAAACGTTTGAGCTGAATATAAAAAATTCTAAGTCAATGAAATTTACAGGTCCTCAAAAATATGGGTGAAATATTGAAAGCTGGAGGTGCTAGCTATTCTTCTGTGGTTAAGACAACTATTATGTATGAAATTCTGTCCTTTTTTCTTGATGTCCATAATATCTTTGCTCTGTTAATATCTAAAGAACTAGGGAGCTGTTTAGTAGTTGTTTAAAAAAATGGTTTTATGCTTTTGTCTACCCAACCATCACTACTTAAAAGTTATTCTGATTTACAGGTATGTTTACTCTGTTTATCCAACTTTCTGTCTTACCCTTCCAACATTGTAATAAATATAATCTGTCTTTGTTATTAATTTTGTATAATTTATTCAACAGAAACTTGACAAAGTTTGTCTTTTGCCAATTTACTTGATGAGTAGATGTCCACGTGAACTACAATTTGAAGTTAAATCAAGATGTAGTAAGTCATATGTTGGTGTTCAAAATGGATGAAGACTTTCGTTAAATATAATTGAAAACTAAAGTGGGTACTAGAACATTTGAAGTTCGGATACTTAAAAAAAAAGGAGTATGGAAATTTATGGACAAAAATAGAATTTAAACCTATTGCAAGAAATTGCCGTATGTTATCGGAGGACTACTTATAGATGATGTTTTCTTGACATTGTTTTCAACAAATAATTATTCTAGAAGTATTGAAAGCGACTCTCAGAACACTCCCATGTTTTTGTTGTGATTCAGTTTTTTCTTCACAATTTGTCTTGCAGGTTGGCAGATCTGAAGGATTTCAAGAAAGTTAATGAGATATATGGTAAATGTAAGTTTCGTTAAACTGAACCTCTACTCTCTCTATTATCAAATGCCGAGCATTTAGCTTTGATATCTGTATGATCTCTCTGTCTCCGTTACAGTTCAACTTTAGTGTCTATAGTTTATTTGATTGAATTTTGAAACTTCACCGAAAAGTTGAACTTTTTGTTGTAACAATTTGTAACAATTTATATCATGTTTAGGAGTGATTTTAAAATTGTTAAAATCACTTTTGTCATTTTTAAAATCACACGAAAACACATTTTTAATCACTCAAAATTAAATTAGTTTTCAATTTTACACTTTTATACAATTTTCATATTGTCAAAATTAGTTTCGAAGGATTAAAGTGATTTTAGTCATTTTAAAATCTGTTAATAGTTTTCATTTACTGAAGGATAACTGAAGTAATGGTGAATTTATGATTCTATCTACGTTGCTTTGATATATTCTCTTGAGATGAGGATGTATTCTTCAATTAAAAAGTCTGTGATGTCCTCAGATTGACACTGGCTTCATTTTTATAGATTTCAAGCTCAAGTTCAGATGGTTTTCACTTTGTTGCAGATTTTCCGGCCCCTGCTCCAGCTCGGTCGACATATCAGGTTGCAGCATTGCCTTTGGATGCTAAAGTCGAAATCGAGTGCATCGCTACACTTTGA

mRNA sequence

ATGGCTTGGTGTGCGGCTCGGACCTTTCACATGCCGGCGTTCGACGTCACTGCACTGCGCTCCAAGACTCCCTTGGTCGTCGGCGTCGGTTGCGTTTCGGTGGCCGGAACCACCTTGTGGCGATCTTCCTCAACTTCCAAGCCCCAAATACCCTTCGCATCCCTTGGCATTTCCACCAATACTAGTATCAAGGAAGCTGTTCAAACTGACAAGGCTCCAGCGGCATTAGGGCCATATTCTCAGGCTATCAAAGCCAACAACCTTCTCTTTGTGTCTGGTGTCCTAGGTCTAAATCCGGAGACAGGGAAATTCGTCTCAGATGATGTTGAAGACCAAACGGAGCAGGTCCTCAAAAATATGGGTGAAATATTGAAAGCTGGAGGTGCTAGCTATTCTTCTGTGGTTAAGACAACTATTATGTTGGCAGATCTGAAGGATTTCAAGAAAGTTAATGAGATATATGGTAAATATTTTCCGGCCCCTGCTCCAGCTCGGTCGACATATCAGGTTGCAGCATTGCCTTTGGATGCTAAAGTCGAAATCGAGTGCATCGCTACACTTTGA

Coding sequence (CDS)

ATGGCTTGGTGTGCGGCTCGGACCTTTCACATGCCGGCGTTCGACGTCACTGCACTGCGCTCCAAGACTCCCTTGGTCGTCGGCGTCGGTTGCGTTTCGGTGGCCGGAACCACCTTGTGGCGATCTTCCTCAACTTCCAAGCCCCAAATACCCTTCGCATCCCTTGGCATTTCCACCAATACTAGTATCAAGGAAGCTGTTCAAACTGACAAGGCTCCAGCGGCATTAGGGCCATATTCTCAGGCTATCAAAGCCAACAACCTTCTCTTTGTGTCTGGTGTCCTAGGTCTAAATCCGGAGACAGGGAAATTCGTCTCAGATGATGTTGAAGACCAAACGGAGCAGGTCCTCAAAAATATGGGTGAAATATTGAAAGCTGGAGGTGCTAGCTATTCTTCTGTGGTTAAGACAACTATTATGTTGGCAGATCTGAAGGATTTCAAGAAAGTTAATGAGATATATGGTAAATATTTTCCGGCCCCTGCTCCAGCTCGGTCGACATATCAGGTTGCAGCATTGCCTTTGGATGCTAAAGTCGAAATCGAGTGCATCGCTACACTTTGA

Protein sequence

MAWCAARTFHMPAFDVTALRSKTPLVVGVGCVSVAGTTLWRSSSTSKPQIPFASLGISTNTSIKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNMGEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPAPAPARSTYQVAALPLDAKVEIECIATL

Homology

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BLAST of CaUC10G184280 vs. NCBI nr
Match: XP_038903207.1 (reactive Intermediate Deaminase A, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 353.2 bits (905), Expect = 1.4e-93
Identity = 179/187 (95.72%), Postives = 183/187 (97.86%), Query Frame = 0


Query: 1   MAWCAARTFHMPAFDVTALRSKTPLVVGVGCVSVAGTTLWRSSSTSKPQIPFASLGISTN 60
           MAWCAARTFHMPAFDVTALRSKTPL VGVGC SVAGTTLWRSSSTSK Q+PFASLGIST+
Sbjct: 1   MAWCAARTFHMPAFDVTALRSKTPLAVGVGCASVAGTTLWRSSSTSKRQMPFASLGISTD 60

Query: 61  TSIKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNM 120
           TSIKEAVQTDKAPAALGPYSQAIKANNLLFVSG LGLNPETGKFVSDDVEDQTEQVLKNM
Sbjct: 61  TSIKEAVQTDKAPAALGPYSQAIKANNLLFVSGCLGLNPETGKFVSDDVEDQTEQVLKNM 120

Query: 121 GEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPAPAPARSTYQVAALPLDAKVE 180
           GEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFP+P+PARSTYQVAALPLDAKVE
Sbjct: 121 GEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPSPARSTYQVAALPLDAKVE 180

Query: 181 IECIATL 188
           IECIATL
Sbjct: 181 IECIATL 187

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BLAST of CaUC10G184280 vs. NCBI nr
Match: XP_008463412.1 (PREDICTED: reactive Intermediate Deaminase A, chloroplastic-like [Cucumis melo])

HSP 1 Score: 352.4 bits (903), Expect = 2.3e-93
Identity = 179/187 (95.72%), Postives = 184/187 (98.40%), Query Frame = 0


Query: 1   MAWCAARTFHMPAFDVTALRSKTPLVVGVGCVSVAGTTLWRSSSTSKPQIPFASLGISTN 60
           MAWCA R+FHMPAFDVTALRSKTPL VGVGCVSVAGTTLWRSSSTSK QIPFASLGIST+
Sbjct: 1   MAWCATRSFHMPAFDVTALRSKTPLAVGVGCVSVAGTTLWRSSSTSKRQIPFASLGISTS 60

Query: 61  TSIKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNM 120
           +SIKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSD+VEDQTEQVLKNM
Sbjct: 61  SSIKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDNVEDQTEQVLKNM 120

Query: 121 GEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPAPAPARSTYQVAALPLDAKVE 180
           GEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFP+PAPARSTYQVAALPLDAKVE
Sbjct: 121 GEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPARSTYQVAALPLDAKVE 180

Query: 181 IECIATL 188
           IECIATL
Sbjct: 181 IECIATL 187

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BLAST of CaUC10G184280 vs. NCBI nr
Match: XP_004152932.1 (reactive Intermediate Deaminase A, chloroplastic [Cucumis sativus] >KGN56123.1 hypothetical protein Csa_009669 [Cucumis sativus])

HSP 1 Score: 349.4 bits (895), Expect = 2.0e-92
Identity = 177/187 (94.65%), Postives = 183/187 (97.86%), Query Frame = 0


Query: 1   MAWCAARTFHMPAFDVTALRSKTPLVVGVGCVSVAGTTLWRSSSTSKPQIPFASLGISTN 60
           MAWCAARTFHMPAFDVTALRSK+PL VGVGCVSVAGTTLWRSSSTSK QIPFASLGIST+
Sbjct: 1   MAWCAARTFHMPAFDVTALRSKSPLAVGVGCVSVAGTTLWRSSSTSKRQIPFASLGISTS 60

Query: 61  TSIKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNM 120
           +SIKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNM
Sbjct: 61  SSIKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNM 120

Query: 121 GEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPAPAPARSTYQVAALPLDAKVE 180
           GEILKAGG+SYSSVVKTTIMLADLKDFKKVNEIY KYFP+PAPARSTY+VA LPLDAKVE
Sbjct: 121 GEILKAGGSSYSSVVKTTIMLADLKDFKKVNEIYAKYFPSPAPARSTYEVARLPLDAKVE 180

Query: 181 IECIATL 188
           IECIATL
Sbjct: 181 IECIATL 187

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BLAST of CaUC10G184280 vs. NCBI nr
Match: XP_022976324.1 (reactive Intermediate Deaminase A, chloroplastic [Cucurbita maxima])

HSP 1 Score: 339.3 bits (869), Expect = 2.0e-89
Identity = 173/187 (92.51%), Postives = 178/187 (95.19%), Query Frame = 0


Query: 1   MAWCAARTFHMPAFDVTALRSKTPLVVGVGCVSVAGTTLWRSSSTSKPQIPFASLGISTN 60
           MAWCAAR  HMPA D+TALRSKTPL VGVGC SVAGTT  RSSSTSK QIPFASLGIST+
Sbjct: 1   MAWCAARALHMPALDITALRSKTPLAVGVGCASVAGTTFCRSSSTSKRQIPFASLGISTD 60

Query: 61  TSIKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNM 120
           TSIKEAV+TDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDD+E QTEQVLKNM
Sbjct: 61  TSIKEAVKTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDIEGQTEQVLKNM 120

Query: 121 GEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPAPAPARSTYQVAALPLDAKVE 180
           GEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFP+PAPARSTYQVAALPLDAKVE
Sbjct: 121 GEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPARSTYQVAALPLDAKVE 180

Query: 181 IECIATL 188
           IECIATL
Sbjct: 181 IECIATL 187

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BLAST of CaUC10G184280 vs. NCBI nr
Match: XP_022942433.1 (reactive Intermediate Deaminase A, chloroplastic [Cucurbita moschata] >XP_023545861.1 reactive Intermediate Deaminase A, chloroplastic [Cucurbita pepo subsp. pepo] >KAG6600781.1 Reactive Intermediate Deaminase A, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 335.1 bits (858), Expect = 3.9e-88
Identity = 171/187 (91.44%), Postives = 176/187 (94.12%), Query Frame = 0


Query: 1   MAWCAARTFHMPAFDVTALRSKTPLVVGVGCVSVAGTTLWRSSSTSKPQIPFASLGISTN 60
           MAWCAAR  HMPA D+TALRSKTPL VGVGC SVAGTTL RSSSTSK QIPFASL IST+
Sbjct: 1   MAWCAARALHMPALDITALRSKTPLAVGVGCASVAGTTLCRSSSTSKRQIPFASLSISTD 60

Query: 61  TSIKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNM 120
            SIKEAV+TDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDD+E QTEQVLKNM
Sbjct: 61  ASIKEAVKTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDIEGQTEQVLKNM 120

Query: 121 GEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPAPAPARSTYQVAALPLDAKVE 180
           GEILKAGGA YSSVVKTTIMLADLKDFKKVNEIYGKYFP+PAPARSTYQVAALPLDAKVE
Sbjct: 121 GEILKAGGAGYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPARSTYQVAALPLDAKVE 180

Query: 181 IECIATL 188
           IECIATL
Sbjct: 181 IECIATL 187

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BLAST of CaUC10G184280 vs. ExPASy Swiss-Prot
Match: Q94JQ4 (Reactive Intermediate Deaminase A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RIDA PE=1 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 6.6e-67
Identity = 139/190 (73.16%), Postives = 156/190 (82.11%), Query Frame = 0


Query: 1   MAWCAARTFHMPAFDV-TALRS-KTPLV-VGVGCVSVAGTTLWRSSSTSKPQIPFASLGI 60
           M W   R+ + P  D+ TALRS +TPLV  GVGC + AG +L+R SS S    PFASL +
Sbjct: 1   MTWSVFRSINTPTLDLSTALRSTRTPLVAAGVGCATFAGVSLFRMSSRSP---PFASLSV 60

Query: 61  STNTSIKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVL 120
           S ++  KE V T+KAPAALGPYSQAIKANNL+F+SGVLGL PETGKFVS+ VEDQTEQVL
Sbjct: 61  SASSVKKEVVSTEKAPAALGPYSQAIKANNLVFLSGVLGLIPETGKFVSESVEDQTEQVL 120

Query: 121 KNMGEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPAPAPARSTYQVAALPLDA 180
           KNMGEILKA GA YSSVVKTTIMLADL DFK VNEIY KYFPAP+PARSTYQVAALPL+A
Sbjct: 121 KNMGEILKASGADYSSVVKTTIMLADLADFKTVNEIYAKYFPAPSPARSTYQVAALPLNA 180

Query: 181 KVEIECIATL 188
           K+EIECIATL
Sbjct: 181 KIEIECIATL 187

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BLAST of CaUC10G184280 vs. ExPASy Swiss-Prot
Match: P52758 (2-iminobutanoate/2-iminopropanoate deaminase OS=Homo sapiens OX=9606 GN=RIDA PE=1 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 1.8e-32
Identity = 63/123 (51.22%), Postives = 92/123 (74.80%), Query Frame = 0


Query: 63  IKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNMGE 122
           I+  + T KAP A+GPYSQA+  +  +++SG +G++P +G+ VS  V ++ +Q LKNMGE
Sbjct: 5   IRRVISTAKAPGAIGPYSQAVLVDRTIYISGQIGMDPSSGQLVSGGVAEEAKQALKNMGE 64

Query: 123 ILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPAPAPARSTYQVAALPLDAKVEIE 182
           ILKA G  +++VVKTT++LAD+ DF  VNEIY +YF +  PAR+ YQVAALP  +++EIE
Sbjct: 65  ILKAAGCDFTNVVKTTVLLADINDFNTVNEIYKQYFKSNFPARAAYQVAALPKGSRIEIE 124

Query: 183 CIA 186
            +A
Sbjct: 125 AVA 127

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BLAST of CaUC10G184280 vs. ExPASy Swiss-Prot
Match: P52760 (2-iminobutanoate/2-iminopropanoate deaminase OS=Mus musculus OX=10090 GN=Rida PE=1 SV=3)

HSP 1 Score: 140.6 bits (353), Expect = 1.8e-32
Identity = 65/123 (52.85%), Postives = 92/123 (74.80%), Query Frame = 0


Query: 63  IKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNMGE 122
           I++ + T KAPAA+GPYSQA++ +  +++SG +GL+P +G+ V   V ++ +Q LKN+GE
Sbjct: 5   IRKVISTTKAPAAIGPYSQAVQVDRTIYISGQVGLDPSSGQLVPGGVVEEAKQALKNLGE 64

Query: 123 ILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPAPAPARSTYQVAALPLDAKVEIE 182
           ILKA G  +++VVKTT++LAD+ DF  VNEIY  YF    PAR+ YQVAALP  ++VEIE
Sbjct: 65  ILKAAGCDFNNVVKTTVLLADMNDFGTVNEIYKTYFQGSLPARAAYQVAALPRGSRVEIE 124

Query: 183 CIA 186
            IA
Sbjct: 125 AIA 127

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BLAST of CaUC10G184280 vs. ExPASy Swiss-Prot
Match: Q10121 (RutC family protein C23G10.2 OS=Caenorhabditis elegans OX=6239 GN=C23G10.2 PE=3 SV=3)

HSP 1 Score: 139.4 bits (350), Expect = 4.1e-32
Identity = 65/122 (53.28%), Postives = 92/122 (75.41%), Query Frame = 0


Query: 64  KEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNMGEI 123
           ++ + +  AP A+GPYSQA++A N +++SG LGL+P+TG  + + V +QT Q LKN+GE+
Sbjct: 41  RQIISSANAPGAIGPYSQAVRAGNTIYLSGSLGLDPKTGD-LKEGVVEQTHQSLKNLGEV 100

Query: 124 LKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPAPAPARSTYQVAALPLDAKVEIEC 183
           LKA GA Y +VVKTT++L ++ DF  VNE+YG+YF +P PAR+ YQVAALP    VEIE 
Sbjct: 101 LKAAGADYGNVVKTTVLLQNIADFAAVNEVYGQYFKSPYPARAAYQVAALPKGGLVEIEA 160

Query: 184 IA 186
           +A
Sbjct: 161 VA 161

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BLAST of CaUC10G184280 vs. ExPASy Swiss-Prot
Match: P52759 (2-iminobutanoate/2-iminopropanoate deaminase OS=Rattus norvegicus OX=10116 GN=Rida PE=1 SV=3)

HSP 1 Score: 136.3 bits (342), Expect = 3.4e-31
Identity = 63/123 (51.22%), Postives = 90/123 (73.17%), Query Frame = 0


Query: 63  IKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNMGE 122
           I++ + T KAPAA+G YSQA+  +  ++VSG +G++P +G+ V   V ++ +Q LKN+GE
Sbjct: 5   IRKVISTSKAPAAIGAYSQAVLVDRTIYVSGQIGMDPSSGQLVPGGVAEEAKQALKNLGE 64

Query: 123 ILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPAPAPARSTYQVAALPLDAKVEIE 182
           ILKA G  +++VVKTT++LAD+ DF  VNEIY  YF    PAR+ YQVAALP  +++EIE
Sbjct: 65  ILKAAGCDFTNVVKTTVLLADINDFGTVNEIYKTYFQGNLPARAAYQVAALPKGSRIEIE 124

Query: 183 CIA 186
            IA
Sbjct: 125 AIA 127

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BLAST of CaUC10G184280 vs. ExPASy TrEMBL
Match: A0A1S3CJ54 (reactive Intermediate Deaminase A, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103501583 PE=3 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 1.1e-93
Identity = 179/187 (95.72%), Postives = 184/187 (98.40%), Query Frame = 0


Query: 1   MAWCAARTFHMPAFDVTALRSKTPLVVGVGCVSVAGTTLWRSSSTSKPQIPFASLGISTN 60
           MAWCA R+FHMPAFDVTALRSKTPL VGVGCVSVAGTTLWRSSSTSK QIPFASLGIST+
Sbjct: 1   MAWCATRSFHMPAFDVTALRSKTPLAVGVGCVSVAGTTLWRSSSTSKRQIPFASLGISTS 60

Query: 61  TSIKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNM 120
           +SIKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSD+VEDQTEQVLKNM
Sbjct: 61  SSIKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDNVEDQTEQVLKNM 120

Query: 121 GEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPAPAPARSTYQVAALPLDAKVE 180
           GEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFP+PAPARSTYQVAALPLDAKVE
Sbjct: 121 GEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPARSTYQVAALPLDAKVE 180

Query: 181 IECIATL 188
           IECIATL
Sbjct: 181 IECIATL 187

[Close]

BLAST of CaUC10G184280 vs. ExPASy TrEMBL
Match: A0A0A0L2Z6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G077580 PE=3 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 9.6e-93
Identity = 177/187 (94.65%), Postives = 183/187 (97.86%), Query Frame = 0


Query: 1   MAWCAARTFHMPAFDVTALRSKTPLVVGVGCVSVAGTTLWRSSSTSKPQIPFASLGISTN 60
           MAWCAARTFHMPAFDVTALRSK+PL VGVGCVSVAGTTLWRSSSTSK QIPFASLGIST+
Sbjct: 1   MAWCAARTFHMPAFDVTALRSKSPLAVGVGCVSVAGTTLWRSSSTSKRQIPFASLGISTS 60

Query: 61  TSIKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNM 120
           +SIKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNM
Sbjct: 61  SSIKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNM 120

Query: 121 GEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPAPAPARSTYQVAALPLDAKVE 180
           GEILKAGG+SYSSVVKTTIMLADLKDFKKVNEIY KYFP+PAPARSTY+VA LPLDAKVE
Sbjct: 121 GEILKAGGSSYSSVVKTTIMLADLKDFKKVNEIYAKYFPSPAPARSTYEVARLPLDAKVE 180

Query: 181 IECIATL 188
           IECIATL
Sbjct: 181 IECIATL 187

[Close]

BLAST of CaUC10G184280 vs. ExPASy TrEMBL
Match: A0A6J1IN69 (reactive Intermediate Deaminase A, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111476753 PE=3 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 9.9e-90
Identity = 173/187 (92.51%), Postives = 178/187 (95.19%), Query Frame = 0


Query: 1   MAWCAARTFHMPAFDVTALRSKTPLVVGVGCVSVAGTTLWRSSSTSKPQIPFASLGISTN 60
           MAWCAAR  HMPA D+TALRSKTPL VGVGC SVAGTT  RSSSTSK QIPFASLGIST+
Sbjct: 1   MAWCAARALHMPALDITALRSKTPLAVGVGCASVAGTTFCRSSSTSKRQIPFASLGISTD 60

Query: 61  TSIKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNM 120
           TSIKEAV+TDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDD+E QTEQVLKNM
Sbjct: 61  TSIKEAVKTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDIEGQTEQVLKNM 120

Query: 121 GEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPAPAPARSTYQVAALPLDAKVE 180
           GEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFP+PAPARSTYQVAALPLDAKVE
Sbjct: 121 GEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPARSTYQVAALPLDAKVE 180

Query: 181 IECIATL 188
           IECIATL
Sbjct: 181 IECIATL 187

[Close]

BLAST of CaUC10G184280 vs. ExPASy TrEMBL
Match: A0A6J1FUT7 (reactive Intermediate Deaminase A, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111447476 PE=3 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 1.9e-88
Identity = 171/187 (91.44%), Postives = 176/187 (94.12%), Query Frame = 0


Query: 1   MAWCAARTFHMPAFDVTALRSKTPLVVGVGCVSVAGTTLWRSSSTSKPQIPFASLGISTN 60
           MAWCAAR  HMPA D+TALRSKTPL VGVGC SVAGTTL RSSSTSK QIPFASL IST+
Sbjct: 1   MAWCAARALHMPALDITALRSKTPLAVGVGCASVAGTTLCRSSSTSKRQIPFASLSISTD 60

Query: 61  TSIKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNM 120
            SIKEAV+TDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDD+E QTEQVLKNM
Sbjct: 61  ASIKEAVKTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDIEGQTEQVLKNM 120

Query: 121 GEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPAPAPARSTYQVAALPLDAKVE 180
           GEILKAGGA YSSVVKTTIMLADLKDFKKVNEIYGKYFP+PAPARSTYQVAALPLDAKVE
Sbjct: 121 GEILKAGGAGYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPARSTYQVAALPLDAKVE 180

Query: 181 IECIATL 188
           IECIATL
Sbjct: 181 IECIATL 187

[Close]

BLAST of CaUC10G184280 vs. ExPASy TrEMBL
Match: A0A6P4APP4 (reactive Intermediate Deaminase A, chloroplastic OS=Ziziphus jujuba OX=326968 GN=LOC107431842 PE=3 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 1.4e-80
Identity = 156/187 (83.42%), Postives = 170/187 (90.91%), Query Frame = 0


Query: 1   MAWCAARTFHMPAFDVTALRSKTPLVVGVGCVSVAGTTLWRSSSTSKPQIPFASLGISTN 60
           MAWCAARTF++PA DV ALR++ PL VGVG  SVAG+ +WRSSS+ K   PFA LGIST+
Sbjct: 1   MAWCAARTFNVPAIDVGALRTRAPLAVGVGFASVAGSNIWRSSSSMKRSAPFACLGISTD 60

Query: 61  TSIKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNM 120
           T IKEAV+TDKAPAALGPYSQAIKANN L+VSGVLGL PETGKFVSD+VEDQTEQVLKNM
Sbjct: 61  TRIKEAVKTDKAPAALGPYSQAIKANNFLYVSGVLGLIPETGKFVSDNVEDQTEQVLKNM 120

Query: 121 GEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPAPAPARSTYQVAALPLDAKVE 180
           GEILKAGGA YSSVVKTTIMLADLKDFKKVNEIY KYFP+PAPARSTYQVAALPLDAK+E
Sbjct: 121 GEILKAGGAGYSSVVKTTIMLADLKDFKKVNEIYAKYFPSPAPARSTYQVAALPLDAKIE 180

Query: 181 IECIATL 188
           IECIA+L
Sbjct: 181 IECIASL 187

[Close]

BLAST of CaUC10G184280 vs. TAIR 10
Match: AT3G20390.1 (endoribonuclease L-PSP family protein )

HSP 1 Score: 255.0 bits (650), Expect = 4.7e-68
Identity = 139/190 (73.16%), Postives = 156/190 (82.11%), Query Frame = 0


Query: 1   MAWCAARTFHMPAFDV-TALRS-KTPLV-VGVGCVSVAGTTLWRSSSTSKPQIPFASLGI 60
           M W   R+ + P  D+ TALRS +TPLV  GVGC + AG +L+R SS S    PFASL +
Sbjct: 1   MTWSVFRSINTPTLDLSTALRSTRTPLVAAGVGCATFAGVSLFRMSSRSP---PFASLSV 60

Query: 61  STNTSIKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVL 120
           S ++  KE V T+KAPAALGPYSQAIKANNL+F+SGVLGL PETGKFVS+ VEDQTEQVL
Sbjct: 61  SASSVKKEVVSTEKAPAALGPYSQAIKANNLVFLSGVLGLIPETGKFVSESVEDQTEQVL 120

Query: 121 KNMGEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPAPAPARSTYQVAALPLDA 180
           KNMGEILKA GA YSSVVKTTIMLADL DFK VNEIY KYFPAP+PARSTYQVAALPL+A
Sbjct: 121 KNMGEILKASGADYSSVVKTTIMLADLADFKTVNEIYAKYFPAPSPARSTYQVAALPLNA 180

Query: 181 KVEIECIATL 188
           K+EIECIATL
Sbjct: 181 KIEIECIATL 187

[Close]

BLAST of CaUC10G184280 vs. TAIR 10
Match: AT3G04480.1 (endoribonucleases )

HSP 1 Score: 42.4 bits (98), Expect = 4.8e-04
Identity = 27/100 (27.00%), Postives = 51/100 (51.00%), Query Frame = 0


Query: 72  APAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNMGEILKAGGASY 131
           AP+ +GPYSQA    ++L ++G LGL+P T    ++    +  Q L N   I ++   S 
Sbjct: 424 APSCIGPYSQATLHQSVLHMAGQLGLDPPTMNLQTEGAIAELNQALTNSEAIAESFNCSI 483

Query: 132 SSVVKTTIMLADLKDFK-KVNEIYGKYFPAPAPARSTYQV 171
           SS     ++    +  + + N+++ K+      A+S+ +V
Sbjct: 484 SSSAILFVVFCSARTKQSERNQLHEKFVTFLGLAKSSRRV 523

The following BLAST results are available for this feature:

BLAST of CaUC10G184280 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903207.1	1.4e-93	95.72	reactive Intermediate Deaminase A, chloroplastic-like [Benincasa hispida]	[more]
XP_008463412.1	2.3e-93	95.72	PREDICTED: reactive Intermediate Deaminase A, chloroplastic-like [Cucumis melo]	[more]
XP_004152932.1	2.0e-92	94.65	reactive Intermediate Deaminase A, chloroplastic [Cucumis sativus] >KGN56123.1 h...	[more]
XP_022976324.1	2.0e-89	92.51	reactive Intermediate Deaminase A, chloroplastic [Cucurbita maxima]	[more]
XP_022942433.1	3.9e-88	91.44	reactive Intermediate Deaminase A, chloroplastic [Cucurbita moschata] >XP_023545...	[more]

BLAST of CaUC10G184280 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94JQ4	6.6e-67	73.16	Reactive Intermediate Deaminase A, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]
P52758	1.8e-32	51.22	2-iminobutanoate/2-iminopropanoate deaminase OS=Homo sapiens OX=9606 GN=RIDA PE=...	[more]
P52760	1.8e-32	52.85	2-iminobutanoate/2-iminopropanoate deaminase OS=Mus musculus OX=10090 GN=Rida PE...	[more]
Q10121	4.1e-32	53.28	RutC family protein C23G10.2 OS=Caenorhabditis elegans OX=6239 GN=C23G10.2 PE=3 ...	[more]
P52759	3.4e-31	51.22	2-iminobutanoate/2-iminopropanoate deaminase OS=Rattus norvegicus OX=10116 GN=Ri...	[more]

BLAST of CaUC10G184280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CJ54	1.1e-93	95.72	reactive Intermediate Deaminase A, chloroplastic-like OS=Cucumis melo OX=3656 GN...	[more]
A0A0A0L2Z6	9.6e-93	94.65	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G077580 PE=3 SV=1	[more]
A0A6J1IN69	9.9e-90	92.51	reactive Intermediate Deaminase A, chloroplastic OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A6J1FUT7	1.9e-88	91.44	reactive Intermediate Deaminase A, chloroplastic OS=Cucurbita moschata OX=3662 G...	[more]
A0A6P4APP4	1.4e-80	83.42	reactive Intermediate Deaminase A, chloroplastic OS=Ziziphus jujuba OX=326968 GN...	[more]

BLAST of CaUC10G184280 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G20390.1	4.7e-68	73.16	endoribonuclease L-PSP family protein	[more]
AT3G04480.1	4.8e-04	27.00	endoribonucleases	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006175	YjgF/YER057c/UK114 family	PFAM	PF01042	Ribonuc_L-PSP	coord: 70..186 e-value: 4.3E-43 score: 146.2
IPR006175	YjgF/YER057c/UK114 family	PANTHER	PTHR11803	2-IMINOBUTANOATE/2-IMINOPROPANOATE DEAMINASE RIDA	coord: 1..187
IPR035959	RutC-like superfamily	GENE3D	3.30.1330.40		coord: 59..186 e-value: 5.6E-50 score: 170.7
IPR035959	RutC-like superfamily	SUPERFAMILY	55298	YjgF-like	coord: 64..187
IPR006056	RidA family	TIGRFAM	TIGR00004	TIGR00004	coord: 64..186 e-value: 1.2E-51 score: 172.1
None	No IPR available	PANTHER	PTHR11803:SF45	PERCHLORIC ACID SOLUBLE TRANSLATION INHIBITOR-LIKE PROTEIN	coord: 1..187
None	No IPR available	CDD	cd00448	YjgF_YER057c_UK114_family	coord: 79..185 e-value: 2.86887E-45 score: 143.083
IPR019897	RidA, conserved site	PROSITE	PS01094	UPF0076	coord: 163..181

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC10G184280.1	CaUC10G184280.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1901565	organonitrogen compound catabolic process
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0019239	deaminase activity