CaUC10G182950 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCATCGTGCTTCAAATAAGGGACGCTTTATTAAAATCAGGAGAAACTAGTGAAGATCCTAAAGTAAAAAATGAAGCAAATTATTTAGCTACTCATAAATTTGAAAATTTTGAATTCTTGTTAGACATGACTATATGGTATGATATCTTATTTGCTGTAAATTTTGTGAGTAAAGTATTACAACATAAAGATGTGCATATTGATGTTGCTTTAGATCACTTGAAAGATTTAGTTTCATTTTTAGAAAAATATAGAAAATGGATTCACAAATGCTATGATTTCAACTAA ATGCATCGAGAAACTAGTGAAGATCCTAAAGTAAAAAATGAAGCAAATTATTTAGCTACTCATAAATTTGAAAATTTTGAATTCTTGTTAGACATGACTATATGGTATGATATCTTATTTGCTGTAAATTTTGTGAGTAAAGTATTACAACATAAAGATGTGCATATTGATGTTGCTTTAGATCACTTGAAAGATTTAGTTTCATTTTTAGAAAAATATAGAAAATGGATTCACAAATGCTATGATTTCAACTAA ATGCATCGAGAAACTAGTGAAGATCCTAAAGTAAAAAATGAAGCAAATTATTTAGCTACTCATAAATTTGAAAATTTTGAATTCTTGTTAGACATGACTATATGGTATGATATCTTATTTGCTGTAAATTTTGTGAGTAAAGTATTACAACATAAAGATGTGCATATTGATGTTGCTTTAGATCACTTGAAAGATTTAGTTTCATTTTTAGAAAAATATAGAAAATGGATTCACAAATGCTATGATTTCAACTAA MHRETSEDPKVKNEANYLATHKFENFEFLLDMTIWYDILFAVNFVSKVLQHKDVHIDVALDHLKDLVSFLEKYRKWIHKCYDFN Homology
BLAST of CaUC10G182950 vs. NCBI nr
Match: KAG4954900.1 (hypothetical protein JHK87_040494 [Glycine soja]) HSP 1 Score: 107.1 bits (266), Expect = 7.7e-20 Identity = 48/74 (64.86%), Postives = 66/74 (89.19%), Query Frame = 0
BLAST of CaUC10G182950 vs. NCBI nr
Match: KAG4963797.1 (hypothetical protein JHK86_040665 [Glycine max] >KAG4966283.1 hypothetical protein JHK85_041258 [Glycine max] >KAG5111252.1 hypothetical protein JHK82_040475 [Glycine max] >KRH16922.1 hypothetical protein GLYMA_14G186200v4 [Glycine max]) HSP 1 Score: 105.5 bits (262), Expect = 2.2e-19 Identity = 47/74 (63.51%), Postives = 65/74 (87.84%), Query Frame = 0
BLAST of CaUC10G182950 vs. NCBI nr
Match: KAG5122538.1 (hypothetical protein JHK84_040878 [Glycine max]) HSP 1 Score: 105.5 bits (262), Expect = 2.2e-19 Identity = 47/74 (63.51%), Postives = 65/74 (87.84%), Query Frame = 0
BLAST of CaUC10G182950 vs. NCBI nr
Match: XP_020270448.1 (zinc finger MYM-type protein 1-like isoform X1 [Asparagus officinalis]) HSP 1 Score: 105.1 bits (261), Expect = 2.9e-19 Identity = 49/72 (68.06%), Postives = 60/72 (83.33%), Query Frame = 0
BLAST of CaUC10G182950 vs. NCBI nr
Match: XP_020270449.1 (zinc finger MYM-type protein 1-like isoform X2 [Asparagus officinalis]) HSP 1 Score: 105.1 bits (261), Expect = 2.9e-19 Identity = 49/72 (68.06%), Postives = 60/72 (83.33%), Query Frame = 0
BLAST of CaUC10G182950 vs. ExPASy TrEMBL
Match: K7M7W9 (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_14G186200 PE=4 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 1.1e-19 Identity = 47/74 (63.51%), Postives = 65/74 (87.84%), Query Frame = 0
BLAST of CaUC10G182950 vs. ExPASy TrEMBL
Match: A0A5B7BBE0 (Putative zinc finger MYM-type protein 1-like (Fragment) OS=Davidia involucrata OX=16924 GN=Din_034979 PE=4 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 5.4e-19 Identity = 47/72 (65.28%), Postives = 61/72 (84.72%), Query Frame = 0
BLAST of CaUC10G182950 vs. ExPASy TrEMBL
Match: A0A2G9GV96 (Dimer_Tnp_hAT domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_18255 PE=4 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 3.5e-18 Identity = 47/71 (66.20%), Postives = 59/71 (83.10%), Query Frame = 0
BLAST of CaUC10G182950 vs. ExPASy TrEMBL
Match: A0A2G2Z407 (Uncharacterized protein OS=Capsicum annuum OX=4072 GN=T459_20282 PE=4 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 5.9e-18 Identity = 48/72 (66.67%), Postives = 59/72 (81.94%), Query Frame = 0
BLAST of CaUC10G182950 vs. ExPASy TrEMBL
Match: A0A151T4M1 (Zinc finger MYM-type protein 5 OS=Cajanus cajan OX=3821 GN=KK1_016512 PE=4 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 2.5e-16 Identity = 42/66 (63.64%), Postives = 55/66 (83.33%), Query Frame = 0
BLAST of CaUC10G182950 vs. TAIR 10
Match: AT4G10200.1 (TTF-type zinc finger protein with HAT dimerisation domain ) HSP 1 Score: 73.2 bits (178), Expect = 1.1e-13 Identity = 36/75 (48.00%), Postives = 53/75 (70.67%), Query Frame = 0
BLAST of CaUC10G182950 vs. TAIR 10
Match: AT3G29638.1 (General transcription factor 2-related zinc finger protein ) HSP 1 Score: 70.1 bits (170), Expect = 9.7e-13 Identity = 36/75 (48.00%), Postives = 50/75 (66.67%), Query Frame = 0
BLAST of CaUC10G182950 vs. TAIR 10
Match: AT2G16040.1 (hAT dimerisation domain-containing protein / transposase-related ) HSP 1 Score: 62.0 bits (149), Expect = 2.6e-10 Identity = 32/76 (42.11%), Postives = 49/76 (64.47%), Query Frame = 0
BLAST of CaUC10G182950 vs. TAIR 10
Match: AT1G35150.1 (General transcription factor 2-related zinc finger protein ) HSP 1 Score: 50.1 bits (118), Expect = 1.0e-06 Identity = 30/70 (42.86%), Postives = 38/70 (54.29%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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