CaUC10G182740 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC10G182740
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	histone deacetylase complex subunit SAP18-like
Location	Ciama_Chr10: 4319688 .. 4321053 (-)
RNA-Seq Expression	CaUC10G182740
Synteny	CaUC10G182740

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTAAACCAAAAATGGAGAATCAGAAGCACTGTAACACTACGACAATGGACAAGAGAAGTAGAGACGAGAAGATGAGCGGAGCTGCAACTGCTCCGCCGCAAGGGAGACCGTCGGCACGACCACTCCCTCCGCCGTCTCAGACCAAAGCTCCCCCGCCGCCTCCTCGCCCCCGTTTCGAACCCGTCGACCGCGAAAAGGTTTCTCTTAGGGCTTCCTGCTTCCTCTCCTAGATAAGATTATGGTTTCTGGAATCTTCATTTGTTGACTCAACTGACATTTCTCTTCTTATCGTTTCTTGCAATTTTTGTTTCCCTCTGTGGCGATTTCAAGACTTGCCCTTTGTTGCTTCGCGTTTTTACCAAGGTACGTTTGAATTCATTGAAAAGCCTTCTTGTTTCTTTTGAAAATTGAGAGAATGGGTCTCCGTTTGACATTATCGACTTGCCGTTATCTTTGATGATGCTTCGTCTTTAATCACTATGGCAGTTTCTTTTGTTGTGTGAAGATTTTGTCGAAGGTTTTCTTGTTGTACACATGTTTTTCTTTTCCTGATTGGTGCAATTGGGAGAAGTGTATCGAGAAAACTTTACTTTGATATTGAAATTTGGGTAGGGTTCATCATGGATTTTCATCTTACTGCAGACATTATCTTACAAAATGTGCTTCATTTACATTTTTTTTGCAGGTTGGAGGTCATCACACTGATGAGGATTTTGCAATTAGAGGTAAGGAACCCAAAGACGAGGTTCAGATTTATACATGGAAAGATGCAACACTCCGGGAGCTGACCGATCTAGTATGTCAAAAACCTACACTTATCTGTTTCTCCCCAGTGTTTTTCCATCTATTCTTGCTGCTGCTGTTCTGTATTTGACAAATGACCATCTAATTTTAGGTTAAGGAGGTTGCTCCAGAGGCAAGAAGAAGAAATGCCAAACTTTCTTTTGCTTTTGTTTATCCCGATAAGCGCGGTCGATTTGTTTTGAAACAGGTTAGTGAATGTTAACGAAAAACATCACCTGCAACTGCAATGGAATTTAAATTATACATTTTCATTTATCTGCTAGATTTGGTCATTTACAATTGTACTAAATGTTTAGCACTTGCACTCCTTGTTTGGTTAAATTGTTGTCATTTTCTTAATGTAAAAACGATATGCTCATTCTTAAGGTGGGGATGACACATTCTTATGGAAATGGGAGAAGGTTAGATGACAGTAAGGCATTGGGTGAACTGGACTTCCAGGTAAAATTAGTTCATGAATTAAGTTATTTGAAAGTTAATGAGGAAACTGATATTTCTTCTACACGTGTTAATTTAAAAATGTAGATTGGAGACTATTTGGACGTGGCAATCCTGTAG

mRNA sequence

ATGGCTAAACCAAAAATGGAGAATCAGAAGCACTGTAACACTACGACAATGGACAAGAGAAGTAGAGACGAGAAGATGAGCGGAGCTGCAACTGCTCCGCCGCAAGGGAGACCGTCGGCACGACCACTCCCTCCGCCGTCTCAGACCAAAGCTCCCCCGCCGCCTCCTCGCCCCCGTTTCGAACCCGTCGACCGCGAAAAGACTTGCCCTTTGTTGCTTCGCGTTTTTACCAAGGTTGGAGGTCATCACACTGATGAGGATTTTGCAATTAGAGGTAAGGAACCCAAAGACGAGGTTCAGATTTATACATGGAAAGATGCAACACTCCGGGAGCTGACCGATCTAGTTAAGGAGGTTGCTCCAGAGGCAAGAAGAAGAAATGCCAAACTTTCTTTTGCTTTTGTTTATCCCGATAAGCGCGGTCGATTTGTTTTGAAACAGGTGGGGATGACACATTCTTATGGAAATGGGAGAAGGTTAGATGACAGTAAGGCATTGGGTGAACTGGACTTCCAGATTGGAGACTATTTGGACGTGGCAATCCTGTAG

Coding sequence (CDS)

ATGGCTAAACCAAAAATGGAGAATCAGAAGCACTGTAACACTACGACAATGGACAAGAGAAGTAGAGACGAGAAGATGAGCGGAGCTGCAACTGCTCCGCCGCAAGGGAGACCGTCGGCACGACCACTCCCTCCGCCGTCTCAGACCAAAGCTCCCCCGCCGCCTCCTCGCCCCCGTTTCGAACCCGTCGACCGCGAAAAGACTTGCCCTTTGTTGCTTCGCGTTTTTACCAAGGTTGGAGGTCATCACACTGATGAGGATTTTGCAATTAGAGGTAAGGAACCCAAAGACGAGGTTCAGATTTATACATGGAAAGATGCAACACTCCGGGAGCTGACCGATCTAGTTAAGGAGGTTGCTCCAGAGGCAAGAAGAAGAAATGCCAAACTTTCTTTTGCTTTTGTTTATCCCGATAAGCGCGGTCGATTTGTTTTGAAACAGGTGGGGATGACACATTCTTATGGAAATGGGAGAAGGTTAGATGACAGTAAGGCATTGGGTGAACTGGACTTCCAGATTGGAGACTATTTGGACGTGGCAATCCTGTAG

Protein sequence

MAKPKMENQKHCNTTTMDKRSRDEKMSGAATAPPQGRPSARPLPPPSQTKAPPPPPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL

Homology

[Close]

BLAST of CaUC10G182740 vs. NCBI nr
Match: XP_038905116.1 (histone deacetylase complex subunit SAP18-like [Benincasa hispida])

HSP 1 Score: 337.0 bits (863), Expect = 9.9e-89
Identity = 172/182 (94.51%), Postives = 174/182 (95.60%), Query Frame = 0


Query: 1   MAKPKMENQKHCNTTTMDKRSRDEKMSGAATAPPQGRPSARPLPPPSQTKAPPPPPRPRF 60
           MAKPKME  + CNTTTMDKRSRDEKMSGAATAP QGRPS RPLPPP   KAPPPPPRPRF
Sbjct: 1   MAKPKMEESEVCNTTTMDKRSRDEKMSGAATAPSQGRPSGRPLPPP---KAPPPPPRPRF 60

Query: 61  EPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVA 120
           EPVDREKTCPLLLRVFTKVGGHHTD+DFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVA
Sbjct: 61  EPVDREKTCPLLLRVFTKVGGHHTDDDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVA 120

Query: 121 PEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVA 180
           PEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVA
Sbjct: 121 PEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVA 179

Query: 181 IL 183
           IL
Sbjct: 181 IL 179

[Close]

BLAST of CaUC10G182740 vs. NCBI nr
Match: KAG6596815.1 (Histone deacetylase complex subunit SAP18, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 328.6 bits (841), Expect = 3.5e-86
Identity = 170/183 (92.90%), Postives = 172/183 (93.99%), Query Frame = 0


Query: 1   MAKPKM-ENQKHCNTTTMDKRSRDEKMSGAATAPPQGRPSARPLPPPSQTKAPPPPPRPR 60
           MAKPK  +NQK  NT TMDKRSRDEKMSGAATAPPQGRPSARPLPPPSQ KAPPPPPR R
Sbjct: 1   MAKPKNGKNQKLSNTPTMDKRSRDEKMSGAATAPPQGRPSARPLPPPSQAKAPPPPPRAR 60

Query: 61  FEPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEV 120
           FEPVDREKTCPLLLRVFTKVG HHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEV
Sbjct: 61  FEPVDREKTCPLLLRVFTKVGSHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEV 120

Query: 121 APEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDV 180
           APEARRRNAKLSFAFVYPDKRGRFVLK VG THSYGNGRRLD SKALGELDFQIGDYLDV
Sbjct: 121 APEARRRNAKLSFAFVYPDKRGRFVLKLVGTTHSYGNGRRLDGSKALGELDFQIGDYLDV 180

Query: 181 AIL 183
           AI+
Sbjct: 181 AIM 183

[Close]

BLAST of CaUC10G182740 vs. NCBI nr
Match: XP_022152730.1 (histone deacetylase complex subunit SAP18-like [Momordica charantia])

HSP 1 Score: 327.4 bits (838), Expect = 7.8e-86
Identity = 164/166 (98.80%), Postives = 165/166 (99.40%), Query Frame = 0


Query: 17  MDKRSRDEKMSGAATAPPQGRPSARPLPPPSQTKAPPPPPRPRFEPVDREKTCPLLLRVF 76
           MDKRSRDEKMSGAATAPPQGRPSARPLPPPSQ KAPPPPPRPRFEPVDREKTCPLLLRVF
Sbjct: 1   MDKRSRDEKMSGAATAPPQGRPSARPLPPPSQPKAPPPPPRPRFEPVDREKTCPLLLRVF 60

Query: 77  TKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVY 136
           TKVGGHH+DEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVY
Sbjct: 61  TKVGGHHSDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVY 120

Query: 137 PDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL 183
           PDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
Sbjct: 121 PDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL 166

[Close]

BLAST of CaUC10G182740 vs. NCBI nr
Match: XP_004147963.1 (histone deacetylase complex subunit SAP18 [Cucumis sativus] >KGN55941.1 hypothetical protein Csa_009634 [Cucumis sativus])

HSP 1 Score: 320.5 bits (820), Expect = 9.6e-84
Identity = 161/166 (96.99%), Postives = 162/166 (97.59%), Query Frame = 0


Query: 17  MDKRSRDEKMSGAATAPPQGRPSARPLPPPSQTKAPPPPPRPRFEPVDREKTCPLLLRVF 76
           MDKRSRDEK SGAATAP QGRPS RPLPPPSQTKAPPP PRPRFEPVDREKTCPLLLRVF
Sbjct: 1   MDKRSRDEKTSGAATAPTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVF 60

Query: 77  TKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVY 136
           TKVGGHHTDEDFA+RGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVY
Sbjct: 61  TKVGGHHTDEDFAVRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVY 120

Query: 137 PDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL 183
           PDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
Sbjct: 121 PDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL 166

[Close]

BLAST of CaUC10G182740 vs. NCBI nr
Match: XP_008448944.1 (PREDICTED: histone deacetylase complex subunit SAP18-like [Cucumis melo] >TYK19452.1 histone deacetylase complex subunit SAP18-like [Cucumis melo var. makuwa])

HSP 1 Score: 318.9 bits (816), Expect = 2.8e-83
Identity = 161/166 (96.99%), Postives = 161/166 (96.99%), Query Frame = 0


Query: 17  MDKRSRDEKMSGAATAPPQGRPSARPLPPPSQTKAPPPPPRPRFEPVDREKTCPLLLRVF 76
           MDKRSRDEK SGAA AP QGRPS RPLPPPSQTKAPPP PRPRFEPVDREKTCPLLLRVF
Sbjct: 1   MDKRSRDEKTSGAAAAPTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVF 60

Query: 77  TKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVY 136
           TKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVY
Sbjct: 61  TKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVY 120

Query: 137 PDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL 183
           PDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
Sbjct: 121 PDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL 166

[Close]

BLAST of CaUC10G182740 vs. ExPASy Swiss-Prot
Match: O64644 (Histone deacetylase complex subunit SAP18 OS=Arabidopsis thaliana OX=3702 GN=At2g45640 PE=1 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 5.5e-50
Identity = 105/153 (68.63%), Postives = 122/153 (79.74%), Query Frame = 0


Query: 29  AATAPPQGRPSARPLPPPSQTKAPPPPPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDF 88
           A  A  QG    RPLPPP +      PPRP+ EPVDREKTCPLLLRVFTK GGHHT ED+
Sbjct: 2   AEAARRQG--GGRPLPPPPR-GVNQQPPRPKPEPVDREKTCPLLLRVFTKSGGHHTSEDY 61

Query: 89  AIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVYPDKRGRFVLKQV 148
           A+RGKEPKDEVQIYTWKDA+LRELTDLVKEV+  ARRRNA+LSFAFVYP+ +G + +++V
Sbjct: 62  AVRGKEPKDEVQIYTWKDASLRELTDLVKEVSVAARRRNARLSFAFVYPNNKGGYNVREV 121

Query: 149 GMTHSYGNGRRLDDSKALGELDFQIGDYLDVAI 182
           G T +Y N ++ DDSK L EL F+IGDYLDVAI
Sbjct: 122 GETMAYPNRKQPDDSKTLSELPFEIGDYLDVAI 151

[Close]

BLAST of CaUC10G182740 vs. ExPASy Swiss-Prot
Match: Q3T022 (Histone deacetylase complex subunit SAP18 OS=Bos taurus OX=9913 GN=SAP18 PE=2 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 9.1e-29
Identity = 68/122 (55.74%), Postives = 81/122 (66.39%), Query Frame = 0


Query: 61  EPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVA 120
           +P+DREKTCPLLLRVFT   G H   D   RG  P  E+QIYTW DATL+ELT LVKEV 
Sbjct: 18  KPIDREKTCPLLLRVFTTNNGRHHRMDEFSRGNVPSSELQIYTWMDATLKELTSLVKEVY 77

Query: 121 PEARRRNAKLSFAFVYPD-KRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDV 180
           PEAR++    +FA V+ D KR  + +K++G T S   G   DDS  L    FQIGDYLD+
Sbjct: 78  PEARKKGTHFNFAIVFTDLKRPGYRVKEIGSTMSGRKG--TDDSMTLQSQKFQIGDYLDI 137

Query: 181 AI 182
           AI
Sbjct: 138 AI 137

[Close]

BLAST of CaUC10G182740 vs. ExPASy Swiss-Prot
Match: O00422 (Histone deacetylase complex subunit SAP18 OS=Homo sapiens OX=9606 GN=SAP18 PE=1 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 9.1e-29
Identity = 68/122 (55.74%), Postives = 81/122 (66.39%), Query Frame = 0


Query: 61  EPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVA 120
           +P+DREKTCPLLLRVFT   G H   D   RG  P  E+QIYTW DATL+ELT LVKEV 
Sbjct: 18  KPIDREKTCPLLLRVFTTNNGRHHRMDEFSRGNVPSSELQIYTWMDATLKELTSLVKEVY 77

Query: 121 PEARRRNAKLSFAFVYPD-KRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDV 180
           PEAR++    +FA V+ D KR  + +K++G T S   G   DDS  L    FQIGDYLD+
Sbjct: 78  PEARKKGTHFNFAIVFTDVKRPGYRVKEIGSTMSGRKG--TDDSMTLQSQKFQIGDYLDI 137

Query: 181 AI 182
           AI
Sbjct: 138 AI 137

[Close]

BLAST of CaUC10G182740 vs. ExPASy Swiss-Prot
Match: Q5RDT5 (Histone deacetylase complex subunit SAP18 OS=Pongo abelii OX=9601 GN=SAP18 PE=2 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 9.1e-29
Identity = 68/122 (55.74%), Postives = 81/122 (66.39%), Query Frame = 0


Query: 61  EPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVA 120
           +P+DREKTCPLLLRVFT   G H   D   RG  P  E+QIYTW DATL+ELT LVKEV 
Sbjct: 18  KPIDREKTCPLLLRVFTTNNGRHHRMDEFSRGNVPSSELQIYTWMDATLKELTSLVKEVY 77

Query: 121 PEARRRNAKLSFAFVYPD-KRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDV 180
           PEAR++    +FA V+ D KR  + +K++G T S   G   DDS  L    FQIGDYLD+
Sbjct: 78  PEARKKGTHFNFAIVFTDVKRPGYRVKEIGSTMSGRKG--TDDSMTLQSQKFQIGDYLDI 137

Query: 181 AI 182
           AI
Sbjct: 138 AI 137

[Close]

BLAST of CaUC10G182740 vs. ExPASy Swiss-Prot
Match: O55128 (Histone deacetylase complex subunit SAP18 OS=Mus musculus OX=10090 GN=Sap18 PE=1 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.2e-28
Identity = 68/122 (55.74%), Postives = 81/122 (66.39%), Query Frame = 0


Query: 61  EPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVA 120
           +P+DREKTCPLLLRVFT   G H   D   RG  P  E+QIYTW DATL+ELT LVKEV 
Sbjct: 18  KPIDREKTCPLLLRVFTTNNGRHHRMDEFSRGNVPSSELQIYTWMDATLKELTSLVKEVY 77

Query: 121 PEARRRNAKLSFAFVYPD-KRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDV 180
           PEAR++    +FA V+ D KR  + +K++G T S   G   DDS  L    FQIGDYLD+
Sbjct: 78  PEARKKGTHFNFAIVFMDLKRPGYRVKEIGSTMSGRKG--TDDSMTLQSQKFQIGDYLDI 137

Query: 181 AI 182
           AI
Sbjct: 138 AI 137

[Close]

BLAST of CaUC10G182740 vs. ExPASy TrEMBL
Match: A0A6J1DES5 (histone deacetylase complex subunit SAP18-like OS=Momordica charantia OX=3673 GN=LOC111020386 PE=3 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 3.8e-86
Identity = 164/166 (98.80%), Postives = 165/166 (99.40%), Query Frame = 0


Query: 17  MDKRSRDEKMSGAATAPPQGRPSARPLPPPSQTKAPPPPPRPRFEPVDREKTCPLLLRVF 76
           MDKRSRDEKMSGAATAPPQGRPSARPLPPPSQ KAPPPPPRPRFEPVDREKTCPLLLRVF
Sbjct: 1   MDKRSRDEKMSGAATAPPQGRPSARPLPPPSQPKAPPPPPRPRFEPVDREKTCPLLLRVF 60

Query: 77  TKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVY 136
           TKVGGHH+DEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVY
Sbjct: 61  TKVGGHHSDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVY 120

Query: 137 PDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL 183
           PDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
Sbjct: 121 PDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL 166

[Close]

BLAST of CaUC10G182740 vs. ExPASy TrEMBL
Match: A0A0A0L751 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G038150 PE=3 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 4.6e-84
Identity = 161/166 (96.99%), Postives = 162/166 (97.59%), Query Frame = 0


Query: 17  MDKRSRDEKMSGAATAPPQGRPSARPLPPPSQTKAPPPPPRPRFEPVDREKTCPLLLRVF 76
           MDKRSRDEK SGAATAP QGRPS RPLPPPSQTKAPPP PRPRFEPVDREKTCPLLLRVF
Sbjct: 1   MDKRSRDEKTSGAATAPTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVF 60

Query: 77  TKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVY 136
           TKVGGHHTDEDFA+RGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVY
Sbjct: 61  TKVGGHHTDEDFAVRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVY 120

Query: 137 PDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL 183
           PDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
Sbjct: 121 PDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL 166

[Close]

BLAST of CaUC10G182740 vs. ExPASy TrEMBL
Match: A0A5D3D7E1 (Histone deacetylase complex subunit SAP18-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold443G001050 PE=3 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.3e-83
Identity = 161/166 (96.99%), Postives = 161/166 (96.99%), Query Frame = 0


Query: 17  MDKRSRDEKMSGAATAPPQGRPSARPLPPPSQTKAPPPPPRPRFEPVDREKTCPLLLRVF 76
           MDKRSRDEK SGAA AP QGRPS RPLPPPSQTKAPPP PRPRFEPVDREKTCPLLLRVF
Sbjct: 1   MDKRSRDEKTSGAAAAPTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVF 60

Query: 77  TKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVY 136
           TKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVY
Sbjct: 61  TKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVY 120

Query: 137 PDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL 183
           PDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
Sbjct: 121 PDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL 166

[Close]

BLAST of CaUC10G182740 vs. ExPASy TrEMBL
Match: A0A1S3BLT9 (histone deacetylase complex subunit SAP18-like OS=Cucumis melo OX=3656 GN=LOC103490959 PE=3 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.3e-83
Identity = 161/166 (96.99%), Postives = 161/166 (96.99%), Query Frame = 0


Query: 17  MDKRSRDEKMSGAATAPPQGRPSARPLPPPSQTKAPPPPPRPRFEPVDREKTCPLLLRVF 76
           MDKRSRDEK SGAA AP QGRPS RPLPPPSQTKAPPP PRPRFEPVDREKTCPLLLRVF
Sbjct: 1   MDKRSRDEKTSGAAAAPTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVF 60

Query: 77  TKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVY 136
           TKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVY
Sbjct: 61  TKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVY 120

Query: 137 PDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL 183
           PDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
Sbjct: 121 PDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL 166

[Close]

BLAST of CaUC10G182740 vs. ExPASy TrEMBL
Match: A0A6J1KTJ0 (histone deacetylase complex subunit SAP18-like OS=Cucurbita maxima OX=3661 GN=LOC111498523 PE=3 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 1.1e-82
Identity = 159/166 (95.78%), Postives = 160/166 (96.39%), Query Frame = 0


Query: 17  MDKRSRDEKMSGAATAPPQGRPSARPLPPPSQTKAPPPPPRPRFEPVDREKTCPLLLRVF 76
           MDKRSRDEKMSGAATAPPQGRPSARPLPPPSQ KAPPPPPR RFEPVDREKTCPLLLRVF
Sbjct: 1   MDKRSRDEKMSGAATAPPQGRPSARPLPPPSQAKAPPPPPRARFEPVDREKTCPLLLRVF 60

Query: 77  TKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVY 136
           TKVG HHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVY
Sbjct: 61  TKVGSHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVY 120

Query: 137 PDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL 183
           PDKRGRFVLK VG THSYGNGRRLD SKALGELDFQIGDYLDVAI+
Sbjct: 121 PDKRGRFVLKPVGTTHSYGNGRRLDGSKALGELDFQIGDYLDVAIM 166

[Close]

BLAST of CaUC10G182740 vs. TAIR 10
Match: AT2G45640.1 (SIN3 associated polypeptide P18 )

HSP 1 Score: 198.7 bits (504), Expect = 3.9e-51
Identity = 105/153 (68.63%), Postives = 122/153 (79.74%), Query Frame = 0


Query: 29  AATAPPQGRPSARPLPPPSQTKAPPPPPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDF 88
           A  A  QG    RPLPPP +      PPRP+ EPVDREKTCPLLLRVFTK GGHHT ED+
Sbjct: 2   AEAARRQG--GGRPLPPPPR-GVNQQPPRPKPEPVDREKTCPLLLRVFTKSGGHHTSEDY 61

Query: 89  AIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVYPDKRGRFVLKQV 148
           A+RGKEPKDEVQIYTWKDA+LRELTDLVKEV+  ARRRNA+LSFAFVYP+ +G + +++V
Sbjct: 62  AVRGKEPKDEVQIYTWKDASLRELTDLVKEVSVAARRRNARLSFAFVYPNNKGGYNVREV 121

Query: 149 GMTHSYGNGRRLDDSKALGELDFQIGDYLDVAI 182
           G T +Y N ++ DDSK L EL F+IGDYLDVAI
Sbjct: 122 GETMAYPNRKQPDDSKTLSELPFEIGDYLDVAI 151

[Close]

BLAST of CaUC10G182740 vs. TAIR 10
Match: AT2G45640.2 (SIN3 associated polypeptide P18 )

HSP 1 Score: 192.2 bits (487), Expect = 3.7e-49
Identity = 105/153 (68.63%), Postives = 119/153 (77.78%), Query Frame = 0


Query: 29  AATAPPQGRPSARPLPPPSQTKAPPPPPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDF 88
           A  A  QG    RPLPPP +      PPRP+ EPVDREKTCPLLLRVFTK GGHHT ED+
Sbjct: 2   AEAARRQG--GGRPLPPPPR-GVNQQPPRPKPEPVDREKTCPLLLRVFTKSGGHHTSEDY 61

Query: 89  AIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVYPDKRGRFVLKQV 148
           A+RGKEPKDEVQIYTWKDA+LRELTDLVKEV+  ARRRNA+LSFAFVYP+ +G +    V
Sbjct: 62  AVRGKEPKDEVQIYTWKDASLRELTDLVKEVSVAARRRNARLSFAFVYPNNKGGY---NV 121

Query: 149 GMTHSYGNGRRLDDSKALGELDFQIGDYLDVAI 182
           G T +Y N ++ DDSK L EL F+IGDYLDVAI
Sbjct: 122 GETMAYPNRKQPDDSKTLSELPFEIGDYLDVAI 148

The following BLAST results are available for this feature:

BLAST of CaUC10G182740 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038905116.1	9.9e-89	94.51	histone deacetylase complex subunit SAP18-like [Benincasa hispida]	[more]
KAG6596815.1	3.5e-86	92.90	Histone deacetylase complex subunit SAP18, partial [Cucurbita argyrosperma subsp...	[more]
XP_022152730.1	7.8e-86	98.80	histone deacetylase complex subunit SAP18-like [Momordica charantia]	[more]
XP_004147963.1	9.6e-84	96.99	histone deacetylase complex subunit SAP18 [Cucumis sativus] >KGN55941.1 hypothet...	[more]
XP_008448944.1	2.8e-83	96.99	PREDICTED: histone deacetylase complex subunit SAP18-like [Cucumis melo] >TYK194...	[more]

BLAST of CaUC10G182740 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O64644	5.5e-50	68.63	Histone deacetylase complex subunit SAP18 OS=Arabidopsis thaliana OX=3702 GN=At2...	[more]
Q3T022	9.1e-29	55.74	Histone deacetylase complex subunit SAP18 OS=Bos taurus OX=9913 GN=SAP18 PE=2 SV...	[more]
O00422	9.1e-29	55.74	Histone deacetylase complex subunit SAP18 OS=Homo sapiens OX=9606 GN=SAP18 PE=1 ...	[more]
Q5RDT5	9.1e-29	55.74	Histone deacetylase complex subunit SAP18 OS=Pongo abelii OX=9601 GN=SAP18 PE=2 ...	[more]
O55128	1.2e-28	55.74	Histone deacetylase complex subunit SAP18 OS=Mus musculus OX=10090 GN=Sap18 PE=1...	[more]

BLAST of CaUC10G182740 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DES5	3.8e-86	98.80	histone deacetylase complex subunit SAP18-like OS=Momordica charantia OX=3673 GN...	[more]
A0A0A0L751	4.6e-84	96.99	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G038150 PE=3 SV=1	[more]
A0A5D3D7E1	1.3e-83	96.99	Histone deacetylase complex subunit SAP18-like OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S3BLT9	1.3e-83	96.99	histone deacetylase complex subunit SAP18-like OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A6J1KTJ0	1.1e-82	95.78	histone deacetylase complex subunit SAP18-like OS=Cucurbita maxima OX=3661 GN=LO...	[more]

BLAST of CaUC10G182740 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G45640.1	3.9e-51	68.63	SIN3 associated polypeptide P18	[more]
AT2G45640.2	3.7e-49	68.63	SIN3 associated polypeptide P18	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010516	Sin3 associated polypeptide p18	PFAM	PF06487	SAP18	coord: 62..181 e-value: 1.9E-38 score: 131.8
IPR010516	Sin3 associated polypeptide p18	PANTHER	PTHR13082	SAP18	coord: 30..182
IPR042534	Sin3 associated polypeptide p18 superfamily	GENE3D	3.10.20.550	ASAP complex, SAP18 subunit	coord: 54..182 e-value: 5.3E-46 score: 157.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..65
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..58
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	PANTHER	PTHR13082:SF4	DEACETYLASE COMPLEX SUBUNIT SAP18, PUTATIVE-RELATED	coord: 30..182

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC10G182740.1	CaUC10G182740.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045892	negative regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003714	transcription corepressor activity