CaUC10G182430 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC10G182430
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	auxin-responsive protein SAUR32
Location	Ciama_Chr10: 3931609 .. 3932064 (+)
RNA-Seq Expression	CaUC10G182430
Synteny	CaUC10G182430

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGACGAACGAGAGGCTTCAAATTGAAAATCAAGCTTCTCAAGATCTTCAAATGGAGAACCCACTTCAATCTTCCAACTCATTCCAATCCCTTCTCCAAGCTCTTTGCCCTTGCAACAGCGTCGTTTTCTCACCGGCCTGGGTATGCCCGCCTCGATCGGGTTCGGTCTAGGCCGGCAGCGGCGGCGCCCAAGGGTTATTTGGCTGTGCACGTCGGCGGACCGGAGGATGAAACGGAGAGACATCTTGTGCCCGTGATTTACTTCAACCATCCATTGTTCCGGAAATTGCTGCAGGCGGCGGAGAGGATTTATGGGTTTGATTATCCGGGTCGGATTGTCATTCCGGTTGACGTGTCGGAGTTTGAGGAGGTTAAAAATTGTATCGCCGCCGCGGAGTACGGCCGTCGCTGTTGGCATAATGGTGGCCACCGACGCCGGCGTTGCGAAAAGTAG

mRNA sequence

ATGAGACGAACGAGAGGCTTCAAATTGAAAATCAAGCTTCTCAAGATCTTCAAATGGAGAACCCACTTCAATCTTCCAACTCATTCCAATCCCTTCTCCAAGCTCTTTGCCCTTGCAACAGCGTCGTTTTCTCACCGGCCTGGGTATGCCCGCCTCGATCGGGTTCGGTCTAGGCCGGCAGCGGCGGCGCCCAAGGGTTATTTGGCTGTGCACGTCGGCGGACCGGAGGATGAAACGGAGAGACATCTTGTGCCCGTGATTTACTTCAACCATCCATTGTTCCGGAAATTGCTGCAGGCGGCGGAGAGGATTTATGGGTTTGATTATCCGGGTCGGATTGTCATTCCGGTTGACGTGTCGGAGTTTGAGGAGGTTAAAAATTGTATCGCCGCCGCGGAGTACGGCCGTCGCTGTTGGCATAATGGTGGCCACCGACGCCGGCGTTGCGAAAAGTAG

Coding sequence (CDS)

ATGAGACGAACGAGAGGCTTCAAATTGAAAATCAAGCTTCTCAAGATCTTCAAATGGAGAACCCACTTCAATCTTCCAACTCATTCCAATCCCTTCTCCAAGCTCTTTGCCCTTGCAACAGCGTCGTTTTCTCACCGGCCTGGGTATGCCCGCCTCGATCGGGTTCGGTCTAGGCCGGCAGCGGCGGCGCCCAAGGGTTATTTGGCTGTGCACGTCGGCGGACCGGAGGATGAAACGGAGAGACATCTTGTGCCCGTGATTTACTTCAACCATCCATTGTTCCGGAAATTGCTGCAGGCGGCGGAGAGGATTTATGGGTTTGATTATCCGGGTCGGATTGTCATTCCGGTTGACGTGTCGGAGTTTGAGGAGGTTAAAAATTGTATCGCCGCCGCGGAGTACGGCCGTCGCTGTTGGCATAATGGTGGCCACCGACGCCGGCGTTGCGAAAAGTAG

Protein sequence

MRRTRGFKLKIKLLKIFKWRTHFNLPTHSNPFSKLFALATASFSHRPGYARLDRVRSRPAAAAPKGYLAVHVGGPEDETERHLVPVIYFNHPLFRKLLQAAERIYGFDYPGRIVIPVDVSEFEEVKNCIAAAEYGRRCWHNGGHRRRRCEK

Homology

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BLAST of CaUC10G182430 vs. NCBI nr
Match: XP_008448892.1 (PREDICTED: auxin-responsive protein SAUR32 [Cucumis melo])

HSP 1 Score: 256.9 bits (655), Expect = 1.1e-64
Identity = 129/151 (85.43%), Postives = 136/151 (90.07%), Query Frame = 0


Query: 2   RRTRGFKLKIKLLKIFKWRTH-FNLPTHSNPFSKLFALATASFSHRPGYARLDRVRSRPA 61
           RRT+GFKLKIKLLKIFKWRTH FNL T+SNPFSKLF+LATA FS R GYARL+RVRS PA
Sbjct: 3   RRTKGFKLKIKLLKIFKWRTHFFNLHTYSNPFSKLFSLATAPFSRRVGYARLNRVRSTPA 62

Query: 62  AAAPKGYLAVHVGGPEDETERHLVPVIYFNHPLFRKLLQAAERIYGFDYPGRIVIPVDVS 121
            A PKGYLAVHVGGPEDETERHLVPVIYFNHP+FRKLLQAAE IYGFDYPGRIVIPVDVS
Sbjct: 63  VATPKGYLAVHVGGPEDETERHLVPVIYFNHPMFRKLLQAAEVIYGFDYPGRIVIPVDVS 122

Query: 122 EFEEVKNCIAAAEYGRRCWHNGGHRRRRCEK 152
           EFEEVKN IAAAE GR C  +GG+RRRRC K
Sbjct: 123 EFEEVKNGIAAAENGRYCRRSGGYRRRRCGK 153

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BLAST of CaUC10G182430 vs. NCBI nr
Match: TYK19488.1 (auxin-responsive protein SAUR32 [Cucumis melo var. makuwa])

HSP 1 Score: 255.0 bits (650), Expect = 4.1e-64
Identity = 128/151 (84.77%), Postives = 136/151 (90.07%), Query Frame = 0


Query: 2   RRTRGFKLKIKLLKIFKWRTH-FNLPTHSNPFSKLFALATASFSHRPGYARLDRVRSRPA 61
           RRT+GFKLKIKLLKIFKWRTH F+L T+SNPFSKLF+LATA FS R GYARL+RVRS PA
Sbjct: 3   RRTKGFKLKIKLLKIFKWRTHFFDLHTYSNPFSKLFSLATAPFSRRVGYARLNRVRSTPA 62

Query: 62  AAAPKGYLAVHVGGPEDETERHLVPVIYFNHPLFRKLLQAAERIYGFDYPGRIVIPVDVS 121
            A PKGYLAVHVGGPEDETERHLVPVIYFNHP+FRKLLQAAE IYGFDYPGRIVIPVDVS
Sbjct: 63  VATPKGYLAVHVGGPEDETERHLVPVIYFNHPMFRKLLQAAEVIYGFDYPGRIVIPVDVS 122

Query: 122 EFEEVKNCIAAAEYGRRCWHNGGHRRRRCEK 152
           EFEEVKN IAAAE GR C  +GG+RRRRC K
Sbjct: 123 EFEEVKNGIAAAENGRYCRRSGGYRRRRCGK 153

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BLAST of CaUC10G182430 vs. NCBI nr
Match: XP_004147976.1 (auxin-responsive protein SAUR32 [Cucumis sativus] >KGN55902.1 hypothetical protein Csa_010511 [Cucumis sativus])

HSP 1 Score: 229.9 bits (585), Expect = 1.4e-56
Identity = 117/151 (77.48%), Postives = 126/151 (83.44%), Query Frame = 0


Query: 2   RRTRGFKLKIKLLKIFKWRT-HFNLPTHSNPFSKLFALATASFSHRPGYARLDRVRSRPA 61
           R T+GFKLK+KLLK+FKWRT  FNL T+SNPFSKLF+LAT  FS    YARL+RVRS P 
Sbjct: 3   RTTKGFKLKLKLLKVFKWRTPFFNLHTYSNPFSKLFSLATDPFSRPVRYARLNRVRSTPP 62

Query: 62  AAAPKGYLAVHVGGPEDETERHLVPVIYFNHPLFRKLLQAAERIYGFDYPGRIVIPVDVS 121
            A PKGYLAVHVGGPE+E ERHLVPVIYFNHP+FRKLLQAAE IYGFDYPGRIVIPVDVS
Sbjct: 63  VATPKGYLAVHVGGPENERERHLVPVIYFNHPMFRKLLQAAEVIYGFDYPGRIVIPVDVS 122

Query: 122 EFEEVKNCIAAAEYGRRCWHNGGHRRRRCEK 152
           EFEEVKN IAA E GR C   GG+RR RC K
Sbjct: 123 EFEEVKNGIAATENGRCCPRRGGYRRWRCGK 153

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BLAST of CaUC10G182430 vs. NCBI nr
Match: KAG6596841.1 (Auxin-responsive protein SAUR36, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028368.1 Auxin-responsive protein SAUR36, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 217.2 bits (552), Expect = 9.4e-53
Identity = 114/149 (76.51%), Postives = 123/149 (82.55%), Query Frame = 0


Query: 1   MRRTRGFKLKIKLLKIFKW--RTHFNLPTHSNPFSKLFALATASFSHRPGYARLDRVRSR 60
           MRRTRGFKLKIKLLKIFK     +FNLP  SNPFS LF+LATASFS R GY RL+R RS 
Sbjct: 1   MRRTRGFKLKIKLLKIFKSTPNFNFNLPPSSNPFSNLFSLATASFSRRLGYGRLERRRS- 60

Query: 61  PAAAAPKGYLAVHVGGPEDETERHLVPVIYFNHPLFRKLLQAAERIYGFDYPGRIVIPVD 120
           P    PKGYLAVHVGGPED+TE HLVPVIYFNHP+F KLLQAAERIYGFDYPGRIVIPV 
Sbjct: 61  PPPPPPKGYLAVHVGGPEDQTETHLVPVIYFNHPMFGKLLQAAERIYGFDYPGRIVIPVG 120

Query: 121 VSEFEEVKNCIAAAEYGRRCWHNGGHRRR 148
           VSEFEEV+NCIAAA++ R    +GG RRR
Sbjct: 121 VSEFEEVRNCIAAADHSRSRRRSGGCRRR 148

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BLAST of CaUC10G182430 vs. NCBI nr
Match: XP_022923260.1 (auxin-responsive protein SAUR32-like [Cucurbita moschata])

HSP 1 Score: 216.9 bits (551), Expect = 1.2e-52
Identity = 113/151 (74.83%), Postives = 122/151 (80.79%), Query Frame = 0


Query: 1   MRRTRGFKLKIKLLKIFKWRTHFNLPTHSNPFSKLFALATASFSHRPGYARLDRVRSRPA 60
           MR T+GF+LKIKL  IFK R      T SNPFSKLFALATASFS    Y+RL+RVR+ P 
Sbjct: 1   MRTTKGFRLKIKLPNIFKRR------TTSNPFSKLFALATASFSRPDAYSRLNRVRNGPE 60

Query: 61  AAAPKGYLAVHVGGPEDETERHLVPVIYFNHPLFRKLLQAAERIYGFDYPGRIVIPVDVS 120
           AAAPKGYLAVHVGG EDE ERHLVP+IYFNHP+F KLLQAAERIYGF YPGRIVIPVDVS
Sbjct: 61  AAAPKGYLAVHVGGAEDERERHLVPLIYFNHPMFGKLLQAAERIYGFQYPGRIVIPVDVS 120

Query: 121 EFEEVKNCIAAAEYGRRCWHNGGHRRRRCEK 152
           EFEEV NCIA AEYG R  H+GG+R R C K
Sbjct: 121 EFEEVTNCIATAEYGCRNRHSGGYRWRSCGK 145

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BLAST of CaUC10G182430 vs. ExPASy Swiss-Prot
Match: O22150 (Auxin-responsive protein SAUR36 OS=Arabidopsis thaliana OX=3702 GN=SAUR36 PE=2 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 4.8e-15
Identity = 42/101 (41.58%), Postives = 61/101 (60.40%), Query Frame = 0


Query: 44  SHRPGYARLDRVRSRPAAAAPKGYLAVHVGGPEDETERHLVPVIYFNHPLFRKLLQAAER 103
           + R  Y  +D  ++ P    P+G+LA++VG  + +  R LVP++YFNHPLF +LL+ AE+
Sbjct: 63  TRRSAYIPVDHKKADP---VPRGHLAIYVGQKDGDCHRVLVPIVYFNHPLFGELLREAEK 122

Query: 104 IYGFDYPGRIVIPVDVSEFEEVKNCIAAAE------YGRRC 139
            YGF + G I IP   S+FE VK  IA+        +GR C
Sbjct: 123 EYGFCHEGGITIPCLYSDFERVKTRIASGSSSRVFPWGRHC 160

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BLAST of CaUC10G182430 vs. ExPASy Swiss-Prot
Match: Q9ZUZ3 (Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana OX=3702 GN=SAUR32 PE=2 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 3.1e-14
Identity = 44/98 (44.90%), Postives = 56/98 (57.14%), Query Frame = 0


Query: 51  RLDRVRSRPAAAAPKGYLAVHVGGPEDETERHLVPVIYFNHPLFRKLLQAAERIYGFDYP 110
           +L R +S      PKG LA+ VG   +E +R +VPV+YFNHPLF +LL+ AE  YGFD  
Sbjct: 12  QLHRKQSVKVKDVPKGCLAIKVGSQGEEQQRFIVPVLYFNHPLFMQLLKEAEDEYGFDQK 71

Query: 111 GRIVIPVDVSEFEEVKNCIAAAEYGRRCWHNGGHRRRR 149
           G I IP  V EF  V+  I     G R  +NG +   R
Sbjct: 72  GTITIPCHVEEFRYVQALID----GERSVYNGNNHHHR 105

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BLAST of CaUC10G182430 vs. ExPASy Swiss-Prot
Match: Q41220 (Auxin-responsive protein SAUR15 OS=Arabidopsis thaliana OX=3702 GN=SAUR15 PE=1 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 3.9e-09
Identity = 29/73 (39.73%), Postives = 49/73 (67.12%), Query Frame = 0


Query: 58  RPAAAAPKGYLAVHVGGPEDETERHLVPVIYFNHPLFRKLLQAAERIYGFDYP-GRIVIP 117
           R +++ P+G++AV+VG  + + +R++VPV Y N PLF++LL  +E  +G+D+P G + IP
Sbjct: 16  RESSSTPRGFMAVYVGENDQKKKRYVVPVSYLNQPLFQQLLSKSEEEFGYDHPMGGLTIP 75

Query: 118 VDVSEFEEVKNCI 130
              S F  V + I
Sbjct: 76  CHESLFFTVTSQI 88

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BLAST of CaUC10G182430 vs. ExPASy Swiss-Prot
Match: Q9SRW0 (Auxin-responsive protein SAUR28 OS=Arabidopsis thaliana OX=3702 GN=SAUR28 PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 6.2e-07
Identity = 23/48 (47.92%), Postives = 33/48 (68.75%), Query Frame = 0


Query: 63  APKGYLAVHVGGPEDETERHLVPVIYFNHPLFRKLLQAAERIYGFDYP 111
           APKG+LAV+VG  +++ +R+ VPV Y   P F+ LL   E  +GFD+P
Sbjct: 24  APKGFLAVYVGENQEKKQRYFVPVSYLKQPSFQALLSKCEEEFGFDHP 71

[Close]

BLAST of CaUC10G182430 vs. ExPASy Swiss-Prot
Match: O65695 (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 8.1e-07
Identity = 25/66 (37.88%), Postives = 39/66 (59.09%), Query Frame = 0


Query: 64  PKGYLAVHVGGPEDETERHLVPVIYFNHPLFRKLLQAAERIYGFDYPGRIVIPVDVSEFE 123
           PKG+  V+VG   +   R++VP+ +  HP F+ LLQ AE  +GFD+   + IP D   F+
Sbjct: 44  PKGHFPVYVG---ENRSRYIVPISFLTHPEFQSLLQRAEEEFGFDHDMGLTIPCDELVFQ 103

Query: 124 EVKNCI 130
            + + I
Sbjct: 104 TLTSMI 106

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BLAST of CaUC10G182430 vs. ExPASy TrEMBL
Match: A0A1S3BLN7 (auxin-responsive protein SAUR32 OS=Cucumis melo OX=3656 GN=LOC103490920 PE=3 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 5.2e-65
Identity = 129/151 (85.43%), Postives = 136/151 (90.07%), Query Frame = 0


Query: 2   RRTRGFKLKIKLLKIFKWRTH-FNLPTHSNPFSKLFALATASFSHRPGYARLDRVRSRPA 61
           RRT+GFKLKIKLLKIFKWRTH FNL T+SNPFSKLF+LATA FS R GYARL+RVRS PA
Sbjct: 3   RRTKGFKLKIKLLKIFKWRTHFFNLHTYSNPFSKLFSLATAPFSRRVGYARLNRVRSTPA 62

Query: 62  AAAPKGYLAVHVGGPEDETERHLVPVIYFNHPLFRKLLQAAERIYGFDYPGRIVIPVDVS 121
            A PKGYLAVHVGGPEDETERHLVPVIYFNHP+FRKLLQAAE IYGFDYPGRIVIPVDVS
Sbjct: 63  VATPKGYLAVHVGGPEDETERHLVPVIYFNHPMFRKLLQAAEVIYGFDYPGRIVIPVDVS 122

Query: 122 EFEEVKNCIAAAEYGRRCWHNGGHRRRRCEK 152
           EFEEVKN IAAAE GR C  +GG+RRRRC K
Sbjct: 123 EFEEVKNGIAAAENGRYCRRSGGYRRRRCGK 153

[Close]

BLAST of CaUC10G182430 vs. ExPASy TrEMBL
Match: A0A5D3D7D7 (Auxin-responsive protein SAUR32 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold443G001430 PE=3 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 2.0e-64
Identity = 128/151 (84.77%), Postives = 136/151 (90.07%), Query Frame = 0


Query: 2   RRTRGFKLKIKLLKIFKWRTH-FNLPTHSNPFSKLFALATASFSHRPGYARLDRVRSRPA 61
           RRT+GFKLKIKLLKIFKWRTH F+L T+SNPFSKLF+LATA FS R GYARL+RVRS PA
Sbjct: 3   RRTKGFKLKIKLLKIFKWRTHFFDLHTYSNPFSKLFSLATAPFSRRVGYARLNRVRSTPA 62

Query: 62  AAAPKGYLAVHVGGPEDETERHLVPVIYFNHPLFRKLLQAAERIYGFDYPGRIVIPVDVS 121
            A PKGYLAVHVGGPEDETERHLVPVIYFNHP+FRKLLQAAE IYGFDYPGRIVIPVDVS
Sbjct: 63  VATPKGYLAVHVGGPEDETERHLVPVIYFNHPMFRKLLQAAEVIYGFDYPGRIVIPVDVS 122

Query: 122 EFEEVKNCIAAAEYGRRCWHNGGHRRRRCEK 152
           EFEEVKN IAAAE GR C  +GG+RRRRC K
Sbjct: 123 EFEEVKNGIAAAENGRYCRRSGGYRRRRCGK 153

[Close]

BLAST of CaUC10G182430 vs. ExPASy TrEMBL
Match: A0A0A0L5M2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G035310 PE=3 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 6.8e-57
Identity = 117/151 (77.48%), Postives = 126/151 (83.44%), Query Frame = 0


Query: 2   RRTRGFKLKIKLLKIFKWRT-HFNLPTHSNPFSKLFALATASFSHRPGYARLDRVRSRPA 61
           R T+GFKLK+KLLK+FKWRT  FNL T+SNPFSKLF+LAT  FS    YARL+RVRS P 
Sbjct: 3   RTTKGFKLKLKLLKVFKWRTPFFNLHTYSNPFSKLFSLATDPFSRPVRYARLNRVRSTPP 62

Query: 62  AAAPKGYLAVHVGGPEDETERHLVPVIYFNHPLFRKLLQAAERIYGFDYPGRIVIPVDVS 121
            A PKGYLAVHVGGPE+E ERHLVPVIYFNHP+FRKLLQAAE IYGFDYPGRIVIPVDVS
Sbjct: 63  VATPKGYLAVHVGGPENERERHLVPVIYFNHPMFRKLLQAAEVIYGFDYPGRIVIPVDVS 122

Query: 122 EFEEVKNCIAAAEYGRRCWHNGGHRRRRCEK 152
           EFEEVKN IAA E GR C   GG+RR RC K
Sbjct: 123 EFEEVKNGIAATENGRCCPRRGGYRRWRCGK 153

[Close]

BLAST of CaUC10G182430 vs. ExPASy TrEMBL
Match: A0A6J1EBA0 (auxin-responsive protein SAUR32-like OS=Cucurbita moschata OX=3662 GN=LOC111431004 PE=3 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 6.0e-53
Identity = 113/151 (74.83%), Postives = 122/151 (80.79%), Query Frame = 0


Query: 1   MRRTRGFKLKIKLLKIFKWRTHFNLPTHSNPFSKLFALATASFSHRPGYARLDRVRSRPA 60
           MR T+GF+LKIKL  IFK R      T SNPFSKLFALATASFS    Y+RL+RVR+ P 
Sbjct: 1   MRTTKGFRLKIKLPNIFKRR------TTSNPFSKLFALATASFSRPDAYSRLNRVRNGPE 60

Query: 61  AAAPKGYLAVHVGGPEDETERHLVPVIYFNHPLFRKLLQAAERIYGFDYPGRIVIPVDVS 120
           AAAPKGYLAVHVGG EDE ERHLVP+IYFNHP+F KLLQAAERIYGF YPGRIVIPVDVS
Sbjct: 61  AAAPKGYLAVHVGGAEDERERHLVPLIYFNHPMFGKLLQAAERIYGFQYPGRIVIPVDVS 120

Query: 121 EFEEVKNCIAAAEYGRRCWHNGGHRRRRCEK 152
           EFEEV NCIA AEYG R  H+GG+R R C K
Sbjct: 121 EFEEVTNCIATAEYGCRNRHSGGYRWRSCGK 145

[Close]

BLAST of CaUC10G182430 vs. ExPASy TrEMBL
Match: A0A6J1G318 (auxin-responsive protein SAUR36-like OS=Cucurbita moschata OX=3662 GN=LOC111450339 PE=3 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 2.3e-52
Identity = 113/149 (75.84%), Postives = 121/149 (81.21%), Query Frame = 0


Query: 1   MRRTRGFKLKIKLLKIFKW--RTHFNLPTHSNPFSKLFALATASFSHRPGYARLDRVRSR 60
           MRR RGFKLKIKLLKIFK     +FNLP  SNPFS LF+LATASFS R GY RL+R RS 
Sbjct: 1   MRRVRGFKLKIKLLKIFKSTPNFNFNLPPSSNPFSNLFSLATASFSRRLGYGRLERRRS- 60

Query: 61  PAAAAPKGYLAVHVGGPEDETERHLVPVIYFNHPLFRKLLQAAERIYGFDYPGRIVIPVD 120
           P    PKGYLAVHVGGPED+TE HLVPVIYFNHP+F KLLQAAERIYGFDYPGRIVIPV 
Sbjct: 61  PPPPPPKGYLAVHVGGPEDQTETHLVPVIYFNHPMFGKLLQAAERIYGFDYPGRIVIPVG 120

Query: 121 VSEFEEVKNCIAAAEYGRRCWHNGGHRRR 148
           VSEFEEV+NCIAAA++ R     GG RRR
Sbjct: 121 VSEFEEVRNCIAAADHSRSRRRTGGCRRR 148

[Close]

BLAST of CaUC10G182430 vs. TAIR 10
Match: AT4G22620.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 115.9 bits (289), Expect = 2.8e-26
Identity = 68/155 (43.87%), Postives = 93/155 (60.00%), Query Frame = 0


Query: 1   MRRTRGFKLKIKLLKIFKW--RTHFN-------LPTHSNPFSKLFALATASFSH------ 60
           M+R RGFK+  + +KIFKW  R+  N       L    NP +K+++LA            
Sbjct: 1   MKRLRGFKIGHRFVKIFKWIIRSRRNQTGKRQCLTGILNPVTKIYSLARRCLRRGANRLC 60

Query: 61  ---RPGYARLDRVRSRPAAAAPKGYLAVHVGGPEDETERHLVPVIYFNHPLFRKLLQAAE 120
              +PG  RL      P    P+G+L VHVG   ++T R +VPVIYFNHPLF +LL+ AE
Sbjct: 61  GGMKPGQTRLGNEPKTP--TVPRGHLVVHVGESGEDTRRVVVPVIYFNHPLFGELLEQAE 120

Query: 121 RIYGFDYPGRIVIPVDVSEFEEVKNCIAAAEYGRR 138
           R+YGF+ PGRI+IP  VS+FE+V+  IAA ++ RR
Sbjct: 121 RVYGFEQPGRIMIPCRVSDFEKVQMRIAAWDHCRR 153

[Close]

BLAST of CaUC10G182430 vs. TAIR 10
Match: AT4G12410.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 115.9 bits (289), Expect = 2.8e-26
Identity = 66/150 (44.00%), Postives = 90/150 (60.00%), Query Frame = 0


Query: 1   MRRTRGFKLKIKLLKIFKWRTHFNLPTH-SNPFSKLFALA----------TASFSHRPG- 60
           M+R RGFK+  + +KIFKW      PT  +NP + + +LA                 PG 
Sbjct: 1   MKRVRGFKIGHRFVKIFKWIPRNRCPTRITNPVTGIRSLARCLSRGAKRLCGGSKKNPGQ 60

Query: 61  -YARLDRVRSRPAAAAPKGYLAVHVGGPEDETERHLVPVIYFNHPLFRKLLQAAERIYGF 120
              RL +   +     P+G+L VHVG  +D+T R +VPVIYFNHPLF +LL+ AER++GF
Sbjct: 61  NQIRLGKDPKKSNRVVPRGHLVVHVGESDDDTRRVVVPVIYFNHPLFGELLEQAERVHGF 120

Query: 121 DYPGRIVIPVDVSEFEEVKNCIAAAEYGRR 138
           D PGRI IP  VS+FE+V+  IAA ++ RR
Sbjct: 121 DQPGRITIPCRVSDFEKVQLRIAAWDHCRR 150

[Close]

BLAST of CaUC10G182430 vs. TAIR 10
Match: AT2G45210.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 82.4 bits (202), Expect = 3.4e-16
Identity = 42/101 (41.58%), Postives = 61/101 (60.40%), Query Frame = 0


Query: 44  SHRPGYARLDRVRSRPAAAAPKGYLAVHVGGPEDETERHLVPVIYFNHPLFRKLLQAAER 103
           + R  Y  +D  ++ P    P+G+LA++VG  + +  R LVP++YFNHPLF +LL+ AE+
Sbjct: 63  TRRSAYIPVDHKKADP---VPRGHLAIYVGQKDGDCHRVLVPIVYFNHPLFGELLREAEK 122

Query: 104 IYGFDYPGRIVIPVDVSEFEEVKNCIAAAE------YGRRC 139
            YGF + G I IP   S+FE VK  IA+        +GR C
Sbjct: 123 EYGFCHEGGITIPCLYSDFERVKTRIASGSSSRVFPWGRHC 160

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BLAST of CaUC10G182430 vs. TAIR 10
Match: AT2G46690.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 79.7 bits (195), Expect = 2.2e-15
Identity = 44/98 (44.90%), Postives = 56/98 (57.14%), Query Frame = 0


Query: 51  RLDRVRSRPAAAAPKGYLAVHVGGPEDETERHLVPVIYFNHPLFRKLLQAAERIYGFDYP 110
           +L R +S      PKG LA+ VG   +E +R +VPV+YFNHPLF +LL+ AE  YGFD  
Sbjct: 12  QLHRKQSVKVKDVPKGCLAIKVGSQGEEQQRFIVPVLYFNHPLFMQLLKEAEDEYGFDQK 71

Query: 111 GRIVIPVDVSEFEEVKNCIAAAEYGRRCWHNGGHRRRR 149
           G I IP  V EF  V+  I     G R  +NG +   R
Sbjct: 72  GTITIPCHVEEFRYVQALID----GERSVYNGNNHHHR 105

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BLAST of CaUC10G182430 vs. TAIR 10
Match: AT3G61900.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 75.9 bits (185), Expect = 3.2e-14
Identity = 35/66 (53.03%), Postives = 44/66 (66.67%), Query Frame = 0


Query: 64  PKGYLAVHVGGPEDETERHLVPVIYFNHPLFRKLLQAAERIYGFDYPGRIVIPVDVSEFE 123
           PKG LA+ VG  E+E +R +VPV YFNHPLF +LL+ AE  YGF+  G I IP  V  F 
Sbjct: 31  PKGCLAIKVGSKEEEKQRFVVPVFYFNHPLFMQLLREAEEEYGFEQKGTITIPCHVEVFR 90

Query: 124 EVKNCI 130
            V++ I
Sbjct: 91  YVQDMI 96

The following BLAST results are available for this feature:

BLAST of CaUC10G182430 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008448892.1	1.1e-64	85.43	PREDICTED: auxin-responsive protein SAUR32 [Cucumis melo]	[more]
TYK19488.1	4.1e-64	84.77	auxin-responsive protein SAUR32 [Cucumis melo var. makuwa]	[more]
XP_004147976.1	1.4e-56	77.48	auxin-responsive protein SAUR32 [Cucumis sativus] >KGN55902.1 hypothetical prote...	[more]
KAG6596841.1	9.4e-53	76.51	Auxin-responsive protein SAUR36, partial [Cucurbita argyrosperma subsp. sororia]...	[more]
XP_022923260.1	1.2e-52	74.83	auxin-responsive protein SAUR32-like [Cucurbita moschata]	[more]

BLAST of CaUC10G182430 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22150	4.8e-15	41.58	Auxin-responsive protein SAUR36 OS=Arabidopsis thaliana OX=3702 GN=SAUR36 PE=2 S...	[more]
Q9ZUZ3	3.1e-14	44.90	Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana OX=3702 GN=SAUR32 PE=2 S...	[more]
Q41220	3.9e-09	39.73	Auxin-responsive protein SAUR15 OS=Arabidopsis thaliana OX=3702 GN=SAUR15 PE=1 S...	[more]
Q9SRW0	6.2e-07	47.92	Auxin-responsive protein SAUR28 OS=Arabidopsis thaliana OX=3702 GN=SAUR28 PE=2 S...	[more]
O65695	8.1e-07	37.88	Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 S...	[more]

BLAST of CaUC10G182430 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BLN7	5.2e-65	85.43	auxin-responsive protein SAUR32 OS=Cucumis melo OX=3656 GN=LOC103490920 PE=3 SV=...	[more]
A0A5D3D7D7	2.0e-64	84.77	Auxin-responsive protein SAUR32 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A0A0L5M2	6.8e-57	77.48	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G035310 PE=3 SV=1	[more]
A0A6J1EBA0	6.0e-53	74.83	auxin-responsive protein SAUR32-like OS=Cucurbita moschata OX=3662 GN=LOC1114310...	[more]
A0A6J1G318	2.3e-52	75.84	auxin-responsive protein SAUR36-like OS=Cucurbita moschata OX=3662 GN=LOC1114503...	[more]

BLAST of CaUC10G182430 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G22620.1	2.8e-26	43.87	SAUR-like auxin-responsive protein family	[more]
AT4G12410.1	2.8e-26	44.00	SAUR-like auxin-responsive protein family	[more]
AT2G45210.1	3.4e-16	41.58	SAUR-like auxin-responsive protein family	[more]
AT2G46690.1	2.2e-15	44.90	SAUR-like auxin-responsive protein family	[more]
AT3G61900.1	3.2e-14	53.03	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 56..128 e-value: 4.6E-17 score: 62.0
None	No IPR available	PANTHER	PTHR31374:SF210	AUXIN-RESPONSIVE PROTEIN-LIKE	coord: 6..140
None	No IPR available	PANTHER	PTHR31374	AUXIN-INDUCED PROTEIN-LIKE-RELATED	coord: 6..140

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC10G182430.1	CaUC10G182430.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin