CaUC10G180930 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC10G180930
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Descriptionglycine-rich cell wall structural protein 1.8-like
LocationCiama_Chr10: 1774071 .. 1774706 (+)
RNA-Seq ExpressionCaUC10G180930
SyntenyCaUC10G180930
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTATCCCTAGAGTTGTGTGCTTTGGCTTTCTTTTCCTTGTAGGGTTAGGTTTAGCTTCGGCTGCCAGAACCCTTCTTGACTATGATCCTCGTACACATCACTATGATTATGATCATCCTAGTCCTAGAGTAGGTTACGATCCTGGTCATCGTGATGAACCCTATGATAATGCATATAGTGGAAGCTCTAGTAGAGGATATGGAATTGGAGACTTGTCTCTTGGAGGTTCCGGACGATATGAAGGTGGTGGAGGACGTGATTCTGGATATGGAGGTCGAAATGATGATCGTGGGGTTGGATATGGTAATAGTGGAGGATATGGAAGTGTAGGAGGACGTGGTGATGGTTATGGTAGCAATGCTGGTGGAGGCTATGGAAATCGCTATGGCCCTTCCCTTAGAGGTAGAGGAAGTGGCAATGGCTATGGAGATTCTCGTGGATATGGAGCACGTGACAATGGGTATGGGAGTGGTGGAGGAGTTGGTAGTGGCTATGGTGGTGGTAGTGGAAGTGTTGGTTATGGCAATGGTGGTGTTCATGGAGGAGAATATGATAATAGCAAAGGAAGTGGAGAAGAAGGAGGATATGATGGTGGGTATGCTGTCAAAAATTCCATCTCAAAGGAGAATTGA

mRNA sequence

ATGGCTATCCCTAGAGTTGTGTGCTTTGGCTTTCTTTTCCTTGTAGGGTTAGGTTTAGCTTCGGCTGCCAGAACCCTTCTTGACTATGATCCTCGTACACATCACTATGATTATGATCATCCTAGTCCTAGAGTAGGTTACGATCCTGGTCATCGTGATGAACCCTATGATAATGCATATAGTGGAAGCTCTAGTAGAGGATATGGAATTGGAGACTTGTCTCTTGGAGGTTCCGGACGATATGAAGGTGGTGGAGGACGTGATTCTGGATATGGAGGTCGAAATGATGATCGTGGGGTTGGATATGGTAATAGTGGAGGATATGGAAGTGTAGGAGGACGTGGTGATGGTTATGGTAGCAATGCTGGTGGAGGCTATGGAAATCGCTATGGCCCTTCCCTTAGAGGTAGAGGAAGTGGCAATGGCTATGGAGATTCTCGTGGATATGGAGCACGTGACAATGGGTATGGGAGTGGTGGAGGAGTTGGTAGTGGCTATGGTGGTGGTAGTGGAAGTGTTGGTTATGGCAATGGTGGTGTTCATGGAGGAGAATATGATAATAGCAAAGGAAGTGGAGAAGAAGGAGGATATGATGGTGGGTATGCTGTCAAAAATTCCATCTCAAAGGAGAATTGA

Coding sequence (CDS)

ATGGCTATCCCTAGAGTTGTGTGCTTTGGCTTTCTTTTCCTTGTAGGGTTAGGTTTAGCTTCGGCTGCCAGAACCCTTCTTGACTATGATCCTCGTACACATCACTATGATTATGATCATCCTAGTCCTAGAGTAGGTTACGATCCTGGTCATCGTGATGAACCCTATGATAATGCATATAGTGGAAGCTCTAGTAGAGGATATGGAATTGGAGACTTGTCTCTTGGAGGTTCCGGACGATATGAAGGTGGTGGAGGACGTGATTCTGGATATGGAGGTCGAAATGATGATCGTGGGGTTGGATATGGTAATAGTGGAGGATATGGAAGTGTAGGAGGACGTGGTGATGGTTATGGTAGCAATGCTGGTGGAGGCTATGGAAATCGCTATGGCCCTTCCCTTAGAGGTAGAGGAAGTGGCAATGGCTATGGAGATTCTCGTGGATATGGAGCACGTGACAATGGGTATGGGAGTGGTGGAGGAGTTGGTAGTGGCTATGGTGGTGGTAGTGGAAGTGTTGGTTATGGCAATGGTGGTGTTCATGGAGGAGAATATGATAATAGCAAAGGAAGTGGAGAAGAAGGAGGATATGATGGTGGGTATGCTGTCAAAAATTCCATCTCAAAGGAGAATTGA

Protein sequence

MAIPRVVCFGFLFLVGLGLASAARTLLDYDPRTHHYDYDHPSPRVGYDPGHRDEPYDNAYSGSSSRGYGIGDLSLGGSGRYEGGGGRDSGYGGRNDDRGVGYGNSGGYGSVGGRGDGYGSNAGGGYGNRYGPSLRGRGSGNGYGDSRGYGARDNGYGSGGGVGSGYGGGSGSVGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISKEN
Homology
BLAST of CaUC10G180930 vs. NCBI nr
Match: XP_038903414.1 (glycine-rich cell wall structural protein 1.8-like [Benincasa hispida])

HSP 1 Score: 291.2 bits (744), Expect = 7.2e-75
Identity = 178/259 (68.73%), Postives = 187/259 (72.20%), Query Frame = 0

Query: 1   MAIPRVVCFGFLFLVGLGLASAARTLLDYDPRTHHYDYDHPSPRVGYDPGHRDEPYDNAY 60
           MAI RVVC GFL L+G GLAS ARTLLDYDPRT  Y+YD P+PRVGYDPGHRDE YDNAY
Sbjct: 1   MAISRVVCLGFLLLIGFGLASTARTLLDYDPRTRQYNYDRPTPRVGYDPGHRDESYDNAY 60

Query: 61  SGSSSRGYGIGDLSLGG-SGRYEGGGGRDSGYGGRNDD---------------------- 120
            GSS+RG+GIGD + GG SGRYEGGGGRDSGYG RNDD                      
Sbjct: 61  GGSSNRGHGIGDSTFGGYSGRYEGGGGRDSGYGSRNDDRGTGYGNGGGYKDVVGHDDGYG 120

Query: 121 -----------------RGVGYGNSGGYGSVGGRGDGYGSNAGGGYGNRYGPSLR----- 180
                            RGVGYGN GGYGSVG  GDGYGSN GGGYGN YGPSLR     
Sbjct: 121 SNGGRGRDYGYGGQNGNRGVGYGNGGGYGSVGEHGDGYGSNGGGGYGNGYGPSLRGSTYG 180

Query: 181 ---GRGSGNGYGDSRGYGARDNGYGSGGGVGSGYGGGSGSVGYGNGGVHGGEYDNSKGSG 212
              GRGSGNGYGDS GYGARDNGYGSGGG G GYGGG+GS GYGNGGVH GEYDN+KGSG
Sbjct: 181 NGGGRGSGNGYGDSHGYGARDNGYGSGGGAGGGYGGGNGSAGYGNGGVHRGEYDNNKGSG 240

BLAST of CaUC10G180930 vs. NCBI nr
Match: XP_038903641.1 (glycine-rich cell wall structural protein 2-like [Benincasa hispida])

HSP 1 Score: 274.6 bits (701), Expect = 7.0e-70
Identity = 171/253 (67.59%), Postives = 178/253 (70.36%), Query Frame = 0

Query: 1   MAIPRVVCFGFLFLVGLGLASAARTLLDYDPRTHHYDYDHPSPRVGYDPGHRDEPYDNAY 60
           MAIPRV+CFG L  V LGLASAAR LLDYDPRT HYDYD PSPRVGYDP HRD  YDN+Y
Sbjct: 1   MAIPRVLCFGLLLFVSLGLASAARILLDYDPRTRHYDYDRPSPRVGYDPSHRDGSYDNSY 60

Query: 61  SGSSSRGYGIGDLSLGGSGRYEGGGGRDSGYGGRNDDRGVGYGNSGGYGSVGGRGDGYGS 120
            G S+RGYGIGD +LGGSGRYEGGG  +  Y   NDDRGVGYGN GGYG VGG GDGYGS
Sbjct: 61  GGGSNRGYGIGDSALGGSGRYEGGGEHNPRYRDGNDDRGVGYGNGGGYGGVGGHGDGYGS 120

Query: 121 NAGGGYGNRYGPSLRGRGSG-------------------------------------NGY 180
           N GGGY  RYGPSL G G G                                     NGY
Sbjct: 121 NGGGGY--RYGPSLGGSGYGNGNGYDQRRDHGVGYGSKGGPESSNAYGDSRGYGARDNGY 180

Query: 181 GDSRGYGARDNGYGSGGGVGSGY-----GGGSGSVGYGNGGVHGGEYDNSKGSGEEGGYD 212
           GDSRGYGARDNGYGSGGGVG GY     GG SGS GYGNGGVHGGEYDNSKGSGEEGGYD
Sbjct: 181 GDSRGYGARDNGYGSGGGVGGGYGVGGHGGSSGSGGYGNGGVHGGEYDNSKGSGEEGGYD 240

BLAST of CaUC10G180930 vs. NCBI nr
Match: XP_008449165.1 (PREDICTED: glycine-rich cell wall structural protein 1.8-like [Cucumis melo] >KAA0053039.1 glycine-rich cell wall structural protein 1.8-like [Cucumis melo var. makuwa] >TYK11494.1 glycine-rich cell wall structural protein 1.8-like [Cucumis melo var. makuwa])

HSP 1 Score: 270.0 bits (689), Expect = 1.7e-68
Identity = 169/224 (75.45%), Postives = 176/224 (78.57%), Query Frame = 0

Query: 1   MAIPRVVCFGFLFLVGLGLASAARTLLDYDPRTHHYDYDHPSPRVGYDPGHRDEPYDNAY 60
           MAI R +C  FL  VGLGLASA RTLLDYDPRT HY YD PSPRVGYDPGHRDE YDNAY
Sbjct: 1   MAILRALCLAFLLFVGLGLASATRTLLDYDPRTRHYGYDRPSPRVGYDPGHRDESYDNAY 60

Query: 61  SGSSSRGYGIGDLSLGGSGRYEGGGGRDSGYGGRNDDRGVGYGNSGGYGSVGGRGDGYGS 120
            GSSSRG+GIGD +LGGSG YEGGG RD GYG RND+RGVGYGN GGYG VGG GDGYG+
Sbjct: 61  GGSSSRGHGIGDSALGGSG-YEGGGRRDYGYGDRNDNRGVGYGNGGGYGGVGGHGDGYGN 120

Query: 121 NAGGGYGNRYGPSL-------RGRGSGNGYGD--SRGYGARDNGYGSG---GGVGSGYGG 180
           N GGGYG+RYGPSL        G+GS NGY D  S GYG RDNGYG      G  SGYG 
Sbjct: 121 NGGGGYGDRYGPSLGGSGYGSGGKGSDNGYDDRHSHGYGGRDNGYGDSHGHEGRDSGYGS 180

Query: 181 GSG-SVGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISKEN 212
           G G S GYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISK N
Sbjct: 181 GGGVSGGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISKGN 223

BLAST of CaUC10G180930 vs. NCBI nr
Match: KAE8650023.1 (hypothetical protein Csa_011563 [Cucumis sativus])

HSP 1 Score: 267.7 bits (683), Expect = 8.5e-68
Identity = 171/256 (66.80%), Postives = 184/256 (71.88%), Query Frame = 0

Query: 1   MAIPRVVCFGFLFLVGLGLASAARTLLDYDPRTHHYDYDHPSPRVGYDPGHRDEPYDNAY 60
           MAIP+V+C GFL  VGLGLASAARTLLDYDPRT  YDYDHP+PRVGYDP HRD+ YD+AY
Sbjct: 1   MAIPKVLCIGFLLFVGLGLASAARTLLDYDPRTRRYDYDHPTPRVGYDPSHRDQSYDSAY 60

Query: 61  SGSSSRGYGIGDLSLGGSGRYEGGGGRDS------------------------------- 120
           SGSSS+GYG+GD +LGGSGRYEGGGGRDS                               
Sbjct: 61  SGSSSKGYGVGDSALGGSGRYEGGGGRDSGYGGRNDDRGAGYGGRNDDHGAGYGSRNDDH 120

Query: 121 --GYGGRNDDRGVGYGNSGGYGSVGGRGDGYGSNAGGGYGNRYGPSL-------RGRGSG 180
             GYGGRNDDRGVGYGN GGYGSVGG GDGYG+N GG YG+RYGPSL        G+GSG
Sbjct: 121 GAGYGGRNDDRGVGYGNGGGYGSVGGHGDGYGNNGGGSYGDRYGPSLGGSGYGSGGKGSG 180

Query: 181 NGYGD-SRGYGARDNGYGSG---GGVGSGYGGGSG-SVGYGNGGVHGGEYDNSKGSGEEG 212
           NGY D SRG GARDN YG      G  SGYG G G S GYGNGGVHGGE+DNSKGSGEEG
Sbjct: 181 NGYDDHSRGNGARDNNYGDSHGHEGRDSGYGSGGGVSGGYGNGGVHGGEHDNSKGSGEEG 240

BLAST of CaUC10G180930 vs. NCBI nr
Match: XP_038903421.1 (glycine-rich cell wall structural protein 1.8-like [Benincasa hispida])

HSP 1 Score: 256.1 bits (653), Expect = 2.6e-64
Identity = 165/247 (66.80%), Postives = 173/247 (70.04%), Query Frame = 0

Query: 1   MAIPRVVCFGFLFLVGLGLASAARTLLDYDPRTHHYDYDHPSPRVGYDPGHRDEPYDNAY 60
           MA  RV+CFGFL  V  GLASAARTLLDYDPRT HYDYD P+PRVGYDP HRD  YDNAY
Sbjct: 12  MATTRVLCFGFLVFVCFGLASAARTLLDYDPRTRHYDYDRPTPRVGYDPSHRDGSYDNAY 71

Query: 61  SGSSSRGYGIGDLSLGGSGRYEGGGGRDSGYGGRNDDRGVGYGNSGGYGSVGGRGDGYGS 120
             SS RGYGIGD +LGGSG+YEG  G DSGYGGRNDDRGVGYGN GGYG + G G+GYG 
Sbjct: 72  GRSSGRGYGIGDSALGGSGQYEGDRGHDSGYGGRNDDRGVGYGNGGGYGGIEGHGNGYGR 131

Query: 121 NAGGGYGNRYGPSLRGRG------------------------SGNGYGDSRGYGARDNG- 180
           N GG Y NR GPSL G G                        S NGYGDSRGY ARDNG 
Sbjct: 132 NGGGSYENRDGPSLGGSGYGSGDGYDQGRDHGVGYGSRGGADSSNGYGDSRGYQARDNGY 191

Query: 181 ------YGSGGGVGSGY-----GGGSGSVGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVK 212
                 YGSGGG G GY     GGG GS GYGNGGVHGGEYDN+KGSG EGGYDGGYAVK
Sbjct: 192 GAHDNVYGSGGGAGGGYGVGGHGGGIGSGGYGNGGVHGGEYDNNKGSG-EGGYDGGYAVK 251

BLAST of CaUC10G180930 vs. ExPASy Swiss-Prot
Match: P0C5C7 (Glycine-rich cell wall structural protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=GRP0.9 PE=2 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 4.8e-05
Identity = 76/205 (37.07%), Postives = 89/205 (43.41%), Query Frame = 0

Query: 1   MAIPRVVCFGFLFLVGLGLASAARTLLDYDPRTHHYDYDHPSPRVGYDPGHRDEPYDNAY 60
           MA  + +    L L+ +G+ ++ARTLL Y P                             
Sbjct: 1   MATTKHLALAILVLLSIGMTTSARTLLGYGP----------------------------- 60

Query: 61  SGSSSRGYGIGDLSLGGSGRYEGGG-GRDSGY---GGRNDDRGVGYGNSGGYGSVGGRGD 120
            G    G G G+   GG G Y G G G  SGY   GG     G GYG  GG G  GG G 
Sbjct: 61  -GGGGGGGGGGE---GGGGGYGGSGYGSGSGYGEGGGSGGAAGGGYGRGGGGGGGGGEGG 120

Query: 121 GYGSNAGGGYGNRYGPSLRGRGS-GNGYGDSRGYGARDNGYGSGGGVGSGYGGGSGSVGY 180
           G GS  G G G+ YG  + G G  G+G G   G G    GYG G G GSGYG G+     
Sbjct: 121 GSGSGYGSGQGSGYGAGVGGAGGYGSGGGGGGGQGGGAGGYGQGSGYGSGYGSGA----- 165

Query: 181 GNGGVHGGEYDNSKGSGEEGGYDGG 201
             GG HGG Y +  G G  GG  GG
Sbjct: 181 --GGAHGGGYGSGGGGGGGGGQGGG 165

BLAST of CaUC10G180930 vs. ExPASy Swiss-Prot
Match: A3C5A7 (Glycine-rich cell wall structural protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=GRP0.9 PE=2 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 4.8e-05
Identity = 76/205 (37.07%), Postives = 89/205 (43.41%), Query Frame = 0

Query: 1   MAIPRVVCFGFLFLVGLGLASAARTLLDYDPRTHHYDYDHPSPRVGYDPGHRDEPYDNAY 60
           MA  + +    L L+ +G+ ++ARTLL Y P                             
Sbjct: 1   MATTKHLALAILVLLSIGMTTSARTLLGYGP----------------------------- 60

Query: 61  SGSSSRGYGIGDLSLGGSGRYEGGG-GRDSGY---GGRNDDRGVGYGNSGGYGSVGGRGD 120
            G    G G G+   GG G Y G G G  SGY   GG     G GYG  GG G  GG G 
Sbjct: 61  -GGGGGGGGGGE---GGGGGYGGSGYGSGSGYGEGGGSGGAAGGGYGRGGGGGGGGGEGG 120

Query: 121 GYGSNAGGGYGNRYGPSLRGRGS-GNGYGDSRGYGARDNGYGSGGGVGSGYGGGSGSVGY 180
           G GS  G G G+ YG  + G G  G+G G   G G    GYG G G GSGYG G+     
Sbjct: 121 GSGSGYGSGQGSGYGAGVGGAGGYGSGGGGGGGQGGGAGGYGQGSGYGSGYGSGA----- 165

Query: 181 GNGGVHGGEYDNSKGSGEEGGYDGG 201
             GG HGG Y +  G G  GG  GG
Sbjct: 181 --GGAHGGGYGSGGGGGGGGGQGGG 165

BLAST of CaUC10G180930 vs. ExPASy Swiss-Prot
Match: Q9SIH2 (Glycine-rich protein DOT1 OS=Arabidopsis thaliana OX=3702 GN=DOT1 PE=2 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 2.4e-04
Identity = 81/210 (38.57%), Postives = 101/210 (48.10%), Query Frame = 0

Query: 9   FGFLFLVGLGLASAARTLL---DYDPRTHHYDYDHP-----SPRVGYDPGHRDEPYDNAY 68
           F   FL+GLGL SA R LL   + +     Y  +          +G  PG        + 
Sbjct: 8   FFLCFLIGLGLCSARRALLSSSESEAEVAAYGVNSGLSAGLGVGIGGGPGGGSGYGGGSG 67

Query: 69  SGSSSRGYGIGDLSLGGSGRY------EGGGGRDSGYGGRNDD---RGVGYGNSGGYGSV 128
            G  + G+G G +  GG G +       GGGG   GYGG + +    G G G +GG+G  
Sbjct: 68  EGGGAGGHGEGHIGGGGGGGHGGGAGGGGGGGPGGGYGGGSGEGGGAGYGGGEAGGHGGG 127

Query: 129 GGRGDGYGSNAGGG-YGNRYGPSLRGRGSGNGYGDSRGYGARDNGYGSGGGVGSGYGGGS 188
           GG G G G   GGG +G  YG   +G G+G GYG     G    G+G GGG G+G GGG 
Sbjct: 128 GGGGAGGGGGGGGGAHGGGYGGG-QGAGAGGGYG-----GGGAGGHGGGGGGGNGGGGGG 187

Query: 189 GSVGYGNGGVHGGEYDNSKGSGEEGGYDGG 201
           GS   G GG HGG Y    G+GE  GY GG
Sbjct: 188 GS---GEGGAHGGGYGAGGGAGE--GYGGG 206

BLAST of CaUC10G180930 vs. ExPASy Swiss-Prot
Match: P35527 (Keratin, type I cytoskeletal 9 OS=Homo sapiens OX=9606 GN=KRT9 PE=1 SV=3)

HSP 1 Score: 47.0 bits (110), Expect = 3.1e-04
Identity = 73/151 (48.34%), Postives = 79/151 (52.32%), Query Frame = 0

Query: 62  GSSSRGYGIGDLSLGGSGRYEGGGGRDSGYGGRNDDRGVGYGN-SGGYGSVGGRGDGYGS 121
           G S   YG G  S GGSG   GGGG   GYGG +  RG   G+  GG GS GG G GYG 
Sbjct: 479 GGSGGSYGRG--SRGGSGGSYGGGGSGGGYGGGSGSRGGSGGSYGGGSGSGGGSGGGYGG 538

Query: 122 NAGGGYGNRYGPSLRGRGSGNGYGDSRGYGARDNGYGSGGGVGSGYGGGSGSVGYGNGGV 181
            +GGG+         G G G+  G    YG    G GSGGG G GYGGGSGS G G+GG 
Sbjct: 539 GSGGGHSG-------GSGGGHSGGSGGNYG---GGSGSGGGSGGGYGGGSGSRG-GSGGS 598

Query: 182 H------GGEYDNSKGSGEE-----GGYDGG 201
           H      GGE   S G GEE     GGY GG
Sbjct: 599 HGGGSGFGGESGGSYGGGEEASGSGGGYGGG 616

BLAST of CaUC10G180930 vs. ExPASy TrEMBL
Match: A0A5A7UHU2 (Glycine-rich cell wall structural protein 1.8-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G001580 PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 8.3e-69
Identity = 169/224 (75.45%), Postives = 176/224 (78.57%), Query Frame = 0

Query: 1   MAIPRVVCFGFLFLVGLGLASAARTLLDYDPRTHHYDYDHPSPRVGYDPGHRDEPYDNAY 60
           MAI R +C  FL  VGLGLASA RTLLDYDPRT HY YD PSPRVGYDPGHRDE YDNAY
Sbjct: 1   MAILRALCLAFLLFVGLGLASATRTLLDYDPRTRHYGYDRPSPRVGYDPGHRDESYDNAY 60

Query: 61  SGSSSRGYGIGDLSLGGSGRYEGGGGRDSGYGGRNDDRGVGYGNSGGYGSVGGRGDGYGS 120
            GSSSRG+GIGD +LGGSG YEGGG RD GYG RND+RGVGYGN GGYG VGG GDGYG+
Sbjct: 61  GGSSSRGHGIGDSALGGSG-YEGGGRRDYGYGDRNDNRGVGYGNGGGYGGVGGHGDGYGN 120

Query: 121 NAGGGYGNRYGPSL-------RGRGSGNGYGD--SRGYGARDNGYGSG---GGVGSGYGG 180
           N GGGYG+RYGPSL        G+GS NGY D  S GYG RDNGYG      G  SGYG 
Sbjct: 121 NGGGGYGDRYGPSLGGSGYGSGGKGSDNGYDDRHSHGYGGRDNGYGDSHGHEGRDSGYGS 180

Query: 181 GSG-SVGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISKEN 212
           G G S GYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISK N
Sbjct: 181 GGGVSGGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISKGN 223

BLAST of CaUC10G180930 vs. ExPASy TrEMBL
Match: A0A1S3BMC4 (glycine-rich cell wall structural protein 1.8-like OS=Cucumis melo OX=3656 GN=LOC103491115 PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 8.3e-69
Identity = 169/224 (75.45%), Postives = 176/224 (78.57%), Query Frame = 0

Query: 1   MAIPRVVCFGFLFLVGLGLASAARTLLDYDPRTHHYDYDHPSPRVGYDPGHRDEPYDNAY 60
           MAI R +C  FL  VGLGLASA RTLLDYDPRT HY YD PSPRVGYDPGHRDE YDNAY
Sbjct: 1   MAILRALCLAFLLFVGLGLASATRTLLDYDPRTRHYGYDRPSPRVGYDPGHRDESYDNAY 60

Query: 61  SGSSSRGYGIGDLSLGGSGRYEGGGGRDSGYGGRNDDRGVGYGNSGGYGSVGGRGDGYGS 120
            GSSSRG+GIGD +LGGSG YEGGG RD GYG RND+RGVGYGN GGYG VGG GDGYG+
Sbjct: 61  GGSSSRGHGIGDSALGGSG-YEGGGRRDYGYGDRNDNRGVGYGNGGGYGGVGGHGDGYGN 120

Query: 121 NAGGGYGNRYGPSL-------RGRGSGNGYGD--SRGYGARDNGYGSG---GGVGSGYGG 180
           N GGGYG+RYGPSL        G+GS NGY D  S GYG RDNGYG      G  SGYG 
Sbjct: 121 NGGGGYGDRYGPSLGGSGYGSGGKGSDNGYDDRHSHGYGGRDNGYGDSHGHEGRDSGYGS 180

Query: 181 GSG-SVGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISKEN 212
           G G S GYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISK N
Sbjct: 181 GGGVSGGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISKGN 223

BLAST of CaUC10G180930 vs. ExPASy TrEMBL
Match: A0A5A7UEU3 (Glycine-rich cell wall structural protein 1.0-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G001560 PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 8.9e-63
Identity = 169/293 (57.68%), Postives = 179/293 (61.09%), Query Frame = 0

Query: 1   MAIPRVVCFGFLFLVGLGLASAARTLLDYDPRTHHYDYDHPSPRVGYDPGHRDEPYDNAY 60
           MAI R +C  FL  V LGLASAARTLLDYDPRT  YDYDHP+PRVGYDP HRD+ YDNAY
Sbjct: 1   MAISRALCISFLLFVCLGLASAARTLLDYDPRTRRYDYDHPTPRVGYDPSHRDQSYDNAY 60

Query: 61  SGSSSRGYGIGDLSLGGSGRYEGGGGRD-------------------------------- 120
            GSS+RGYG+GD +LGGSGRYEGGGG D                                
Sbjct: 61  GGSSNRGYGVGDSALGGSGRYEGGGGHDYGYGGRNDDRGVGYGGRNDDHGAGYGAGYGGR 120

Query: 121 --------------------------------------SGYGGRNDDRGVGYGNSGGYGS 180
                                                 +GYGGRNDDRGVGYGN GGYG 
Sbjct: 121 NDDRGAGYGGRNDDRGAGYGRRNDDHGAGYGGRNDDRGAGYGGRNDDRGVGYGNGGGYGG 180

Query: 181 VGGRGDGYGSNAGGGYGNRYGPSL-------RGRGSGNGYGD-SRGYGARDNGYGSG--- 212
           VGG GDGYG+N GGGYG+RY PSL        G+GSGNGY D SRGYG  DNGYG     
Sbjct: 181 VGGHGDGYGNNVGGGYGDRYSPSLGGSGYGNGGKGSGNGYDDHSRGYGGHDNGYGDSHGH 240

BLAST of CaUC10G180930 vs. ExPASy TrEMBL
Match: A0A1S3BM26 (glycine-rich cell wall structural protein 1.0-like OS=Cucumis melo OX=3656 GN=LOC103491114 PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 8.9e-63
Identity = 169/293 (57.68%), Postives = 179/293 (61.09%), Query Frame = 0

Query: 1   MAIPRVVCFGFLFLVGLGLASAARTLLDYDPRTHHYDYDHPSPRVGYDPGHRDEPYDNAY 60
           MAI R +C  FL  V LGLASAARTLLDYDPRT  YDYDHP+PRVGYDP HRD+ YDNAY
Sbjct: 1   MAISRALCISFLLFVCLGLASAARTLLDYDPRTRRYDYDHPTPRVGYDPSHRDQSYDNAY 60

Query: 61  SGSSSRGYGIGDLSLGGSGRYEGGGGRD-------------------------------- 120
            GSS+RGYG+GD +LGGSGRYEGGGG D                                
Sbjct: 61  GGSSNRGYGVGDSALGGSGRYEGGGGHDYGYGGRNDDRGVGYGGRNDDHGAGYGAGYGGR 120

Query: 121 --------------------------------------SGYGGRNDDRGVGYGNSGGYGS 180
                                                 +GYGGRNDDRGVGYGN GGYG 
Sbjct: 121 NDDRGAGYGGRNDDRGAGYGRRNDDHGAGYGGRNDDRGAGYGGRNDDRGVGYGNGGGYGG 180

Query: 181 VGGRGDGYGSNAGGGYGNRYGPSL-------RGRGSGNGYGD-SRGYGARDNGYGSG--- 212
           VGG GDGYG+N GGGYG+RY PSL        G+GSGNGY D SRGYG  DNGYG     
Sbjct: 181 VGGHGDGYGNNVGGGYGDRYSPSLGGSGYGNGGKGSGNGYDDHSRGYGGHDNGYGDSHGH 240

BLAST of CaUC10G180930 vs. ExPASy TrEMBL
Match: A0A0A0L1V3 (Glycine-rich protein-1 OS=Cucumis sativus OX=3659 GN=Csa_3G011070 PE=4 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 1.2e-62
Identity = 163/224 (72.77%), Postives = 172/224 (76.79%), Query Frame = 0

Query: 1   MAIPRVVCFGFLFLVGLGLASAARTLLDYDPRTHHYDYDHPSPRVGYDPGHRDEPYDNAY 60
           MAI R +C  FL  V LGLASA RTLLDYDPRT  Y YD PSPRVGYDPGH DE YD AY
Sbjct: 1   MAILRALCLAFLLFVRLGLASATRTLLDYDPRTLQYGYDRPSPRVGYDPGHGDESYDKAY 60

Query: 61  SGSSSRGYGIGDLSLGGSGRYEGGGGRDSGYGGRNDDRGVGYGN-SGGYGSVGGRGDGYG 120
            GSSSRG+GIGD +LGGSG YEGGG  D GYG R++DRGVGYGN  GGYG VGG GDGYG
Sbjct: 61  GGSSSRGHGIGDSALGGSG-YEGGGRHDYGYGDRHNDRGVGYGNYGGGYGGVGGHGDGYG 120

Query: 121 SNAGGGYGNRYGPSL-------RGRGSGNGYGD-SRGYGARDNGYGSG---GGVGSGYGG 180
           +N GG YG+RYGPSL        G+GSGNGY D SRG GARDN YG     GG  SGYG 
Sbjct: 121 NNGGGSYGDRYGPSLGGSGYGSGGKGSGNGYDDHSRGNGARDNSYGDSHGHGGRDSGYGS 180

Query: 181 GSG-SVGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISKEN 212
           G G + GYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISK N
Sbjct: 181 GGGVTGGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISKGN 223

BLAST of CaUC10G180930 vs. TAIR 10
Match: AT2G36120.1 (Glycine-rich protein family )

HSP 1 Score: 47.4 bits (111), Expect = 1.7e-05
Identity = 81/210 (38.57%), Postives = 101/210 (48.10%), Query Frame = 0

Query: 9   FGFLFLVGLGLASAARTLL---DYDPRTHHYDYDHP-----SPRVGYDPGHRDEPYDNAY 68
           F   FL+GLGL SA R LL   + +     Y  +          +G  PG        + 
Sbjct: 8   FFLCFLIGLGLCSARRALLSSSESEAEVAAYGVNSGLSAGLGVGIGGGPGGGSGYGGGSG 67

Query: 69  SGSSSRGYGIGDLSLGGSGRY------EGGGGRDSGYGGRNDD---RGVGYGNSGGYGSV 128
            G  + G+G G +  GG G +       GGGG   GYGG + +    G G G +GG+G  
Sbjct: 68  EGGGAGGHGEGHIGGGGGGGHGGGAGGGGGGGPGGGYGGGSGEGGGAGYGGGEAGGHGGG 127

Query: 129 GGRGDGYGSNAGGG-YGNRYGPSLRGRGSGNGYGDSRGYGARDNGYGSGGGVGSGYGGGS 188
           GG G G G   GGG +G  YG   +G G+G GYG     G    G+G GGG G+G GGG 
Sbjct: 128 GGGGAGGGGGGGGGAHGGGYGGG-QGAGAGGGYG-----GGGAGGHGGGGGGGNGGGGGG 187

Query: 189 GSVGYGNGGVHGGEYDNSKGSGEEGGYDGG 201
           GS   G GG HGG Y    G+GE  GY GG
Sbjct: 188 GS---GEGGAHGGGYGAGGGAGE--GYGGG 206

BLAST of CaUC10G180930 vs. TAIR 10
Match: AT5G46730.1 (glycine-rich protein )

HSP 1 Score: 45.1 bits (105), Expect = 8.4e-05
Identity = 71/159 (44.65%), Postives = 78/159 (49.06%), Query Frame = 0

Query: 62  GSSSRGYGIGDLSLGGSGRYEGGGGRDSGYGGRNDDRGVGYGNSGGYGSVGGR--GDGYG 121
           G S+ G G    S  G+G  EGGG   SGYGG     G G+G  GG GS GG   G GYG
Sbjct: 131 GGSAYGAGGEHASGYGNGAGEGGGAGASGYGGGAYGGGGGHGGGGGGGSAGGAHGGSGYG 190

Query: 122 SNAGGGY---GNRYGPSLRGRGSGNGYGDSRGY---GARDNGYGSGGGVGSGYGGGS--- 181
              GGG    G+  G    G G G G G    Y   GA   GYGSGGG G GYGGG+   
Sbjct: 191 GGEGGGAGGGGSHGGAGGYGGGGGGGSGGGGAYGGGGAHGGGYGSGGGEGGGYGGGAAGG 250

Query: 182 ----GSVGYGNGGVHGGEYDNSKGSGEEGG---YDGGYA 203
               G  G G GG +GGE+    G G  GG     GGYA
Sbjct: 251 YGGGGGGGEGGGGSYGGEHGGGSGGGHGGGGGHGGGGYA 289

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038903414.17.2e-7568.73glycine-rich cell wall structural protein 1.8-like [Benincasa hispida][more]
XP_038903641.17.0e-7067.59glycine-rich cell wall structural protein 2-like [Benincasa hispida][more]
XP_008449165.11.7e-6875.45PREDICTED: glycine-rich cell wall structural protein 1.8-like [Cucumis melo] >KA... [more]
KAE8650023.18.5e-6866.80hypothetical protein Csa_011563 [Cucumis sativus][more]
XP_038903421.12.6e-6466.80glycine-rich cell wall structural protein 1.8-like [Benincasa hispida][more]
Match NameE-valueIdentityDescription
P0C5C74.8e-0537.07Glycine-rich cell wall structural protein 2 OS=Oryza sativa subsp. indica OX=399... [more]
A3C5A74.8e-0537.07Glycine-rich cell wall structural protein 2 OS=Oryza sativa subsp. japonica OX=3... [more]
Q9SIH22.4e-0438.57Glycine-rich protein DOT1 OS=Arabidopsis thaliana OX=3702 GN=DOT1 PE=2 SV=1[more]
P355273.1e-0448.34Keratin, type I cytoskeletal 9 OS=Homo sapiens OX=9606 GN=KRT9 PE=1 SV=3[more]
Match NameE-valueIdentityDescription
A0A5A7UHU28.3e-6975.45Glycine-rich cell wall structural protein 1.8-like OS=Cucumis melo var. makuwa O... [more]
A0A1S3BMC48.3e-6975.45glycine-rich cell wall structural protein 1.8-like OS=Cucumis melo OX=3656 GN=LO... [more]
A0A5A7UEU38.9e-6357.68Glycine-rich cell wall structural protein 1.0-like OS=Cucumis melo var. makuwa O... [more]
A0A1S3BM268.9e-6357.68glycine-rich cell wall structural protein 1.0-like OS=Cucumis melo OX=3656 GN=LO... [more]
A0A0A0L1V31.2e-6272.77Glycine-rich protein-1 OS=Cucumis sativus OX=3659 GN=Csa_3G011070 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT2G36120.11.7e-0538.57Glycine-rich protein family [more]
AT5G46730.18.4e-0544.65glycine-rich protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01228EGGSHELLcoord: 112..127
score: 41.41
coord: 167..185
score: 35.53
coord: 138..148
score: 32.95
coord: 6..22
score: 33.09
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 79..98
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 130..211
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 33..55
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 33..64

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC10G180930.1CaUC10G180930.1mRNA