Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGTCCCTACAGTTTTGTGCTTTGGCTTTCTTCTTCTTGCAGGGTTAGGTTTAGCTTCGGCTGCCAGAACCCTTCTTGATTATGATCCTCATACACGTCACTATGATTATGATCGTCCTAGTCCAAGAATAGGTTACGATCCTGGTCATCGTGATGAATCCTATGATAATGCATATGGTGGAAGCTCTAGTAGAGGACATGGAATTGGAGACTCGTCTCTTGGAGGAGGTTTCGGACGATATGAAGGTGGTGGAGGACGTGATTCTGGATATGGAGGTCGAAATGATGATCGTGGGGTTGGATATGGTAATGGTGGTGGGTATGGAGGTGTAGGAGGACATGGTGATGGTTATGGTAGCAATGGTGGTGGAGGTTATGGAAATCGCTATGGCCCTTCCCTTGGAGGTAGAGGAAGTGGCAATGGCTATGGAGATTCTCGTGGATATGGAGCACGTGACAATGGGTATGGGAGTGGTGGAGGAGTTGGTAGTGGCTATGGTGGTGGTAGTGGAAGTGTTGGTTATGGCAATGGTGGTGTTCATGGAAGAGAATATGATAATAGCAAAGGAAGTGGAGAAGGAGGATATGATGGTGGGTATACTGTCAAAAATTCCATCTCAAGGGAGAATTGA
mRNA sequence
ATGGCTGTCCCTACAGTTTTGTGCTTTGGCTTTCTTCTTCTTGCAGGGTTAGGTTTAGCTTCGGCTGCCAGAACCCTTCTTGATTATGATCCTCATACACGTCACTATGATTATGATCGTCCTAGTCCAAGAATAGGTTACGATCCTGGTCATCGTGATGAATCCTATGATAATGCATATGGTGGAAGCTCTAGTAGAGGACATGGAATTGGAGACTCGTCTCTTGGAGGAGGTTTCGGACGATATGAAGGTGGTGGAGGACGTGATTCTGGATATGGAGGTCGAAATGATGATCGTGGGGTTGGATATGGTAATGGTGGTGGGTATGGAGGTGTAGGAGGACATGGTGATGGTTATGGTAGCAATGGTGGTGGAGGTTATGGAAATCGCTATGGCCCTTCCCTTGGAGGTAGAGGAAGTGGCAATGGCTATGGAGATTCTCGTGGATATGGAGCACGTGACAATGGGTATGGGAGTGGTGGAGGAGTTGGTAGTGGCTATGGTGGTGGTAGTGGAAGTGTTGGTTATGGCAATGGTGGTGTTCATGGAAGAGAATATGATAATAGCAAAGGAAGTGGAGAAGGAGGATATGATGGTGGGTATACTGTCAAAAATTCCATCTCAAGGGAGAATTGA
Coding sequence (CDS)
ATGGCTGTCCCTACAGTTTTGTGCTTTGGCTTTCTTCTTCTTGCAGGGTTAGGTTTAGCTTCGGCTGCCAGAACCCTTCTTGATTATGATCCTCATACACGTCACTATGATTATGATCGTCCTAGTCCAAGAATAGGTTACGATCCTGGTCATCGTGATGAATCCTATGATAATGCATATGGTGGAAGCTCTAGTAGAGGACATGGAATTGGAGACTCGTCTCTTGGAGGAGGTTTCGGACGATATGAAGGTGGTGGAGGACGTGATTCTGGATATGGAGGTCGAAATGATGATCGTGGGGTTGGATATGGTAATGGTGGTGGGTATGGAGGTGTAGGAGGACATGGTGATGGTTATGGTAGCAATGGTGGTGGAGGTTATGGAAATCGCTATGGCCCTTCCCTTGGAGGTAGAGGAAGTGGCAATGGCTATGGAGATTCTCGTGGATATGGAGCACGTGACAATGGGTATGGGAGTGGTGGAGGAGTTGGTAGTGGCTATGGTGGTGGTAGTGGAAGTGTTGGTTATGGCAATGGTGGTGTTCATGGAAGAGAATATGATAATAGCAAAGGAAGTGGAGAAGGAGGATATGATGGTGGGTATACTGTCAAAAATTCCATCTCAAGGGAGAATTGA
Protein sequence
MAVPTVLCFGFLLLAGLGLASAARTLLDYDPHTRHYDYDRPSPRIGYDPGHRDESYDNAYGGSSSRGHGIGDSSLGGGFGRYEGGGGRDSGYGGRNDDRGVGYGNGGGYGGVGGHGDGYGSNGGGGYGNRYGPSLGGRGSGNGYGDSRGYGARDNGYGSGGGVGSGYGGGSGSVGYGNGGVHGREYDNSKGSGEGGYDGGYTVKNSISREN
Homology
BLAST of CaUC10G180910 vs. NCBI nr
Match:
XP_038903414.1 (glycine-rich cell wall structural protein 1.8-like [Benincasa hispida])
HSP 1 Score: 282.0 bits (720), Expect = 4.4e-72
Identity = 177/259 (68.34%), Postives = 188/259 (72.59%), Query Frame = 0
Query: 1 MAVPTVLCFGFLLLAGLGLASAARTLLDYDPHTRHYDYDRPSPRIGYDPGHRDESYDNAY 60
MA+ V+C GFLLL G GLAS ARTLLDYDP TR Y+YDRP+PR+GYDPGHRDESYDNAY
Sbjct: 1 MAISRVVCLGFLLLIGFGLASTARTLLDYDPRTRQYNYDRPTPRVGYDPGHRDESYDNAY 60
Query: 61 GGSSSRGHGIGDSSLGGGFGRYEGGGGRDSGYGGRNDD---------------------- 120
GGSS+RGHGIGDS+ GG GRYEGGGGRDSGYG RNDD
Sbjct: 61 GGSSNRGHGIGDSTFGGYSGRYEGGGGRDSGYGSRNDDRGTGYGNGGGYKDVVGHDDGYG 120
Query: 121 -----------------RGVGYGNGGGYGGVGGHGDGYGSNGGGGYGNRYGPSL------ 180
RGVGYGNGGGYG VG HGDGYGSNGGGGYGN YGPSL
Sbjct: 121 SNGGRGRDYGYGGQNGNRGVGYGNGGGYGSVGEHGDGYGSNGGGGYGNGYGPSLRGSTYG 180
Query: 181 --GGRGSGNGYGDSRGYGARDNGYGSGGGVGSGYGGGSGSVGYGNGGVHGREYDNSKGSG 212
GGRGSGNGYGDS GYGARDNGYGSGGG G GYGGG+GS GYGNGGVH EYDN+KGSG
Sbjct: 181 NGGGRGSGNGYGDSHGYGARDNGYGSGGGAGGGYGGGNGSAGYGNGGVHRGEYDNNKGSG 240
BLAST of CaUC10G180910 vs. NCBI nr
Match:
XP_008449165.1 (PREDICTED: glycine-rich cell wall structural protein 1.8-like [Cucumis melo] >KAA0053039.1 glycine-rich cell wall structural protein 1.8-like [Cucumis melo var. makuwa] >TYK11494.1 glycine-rich cell wall structural protein 1.8-like [Cucumis melo var. makuwa])
HSP 1 Score: 264.2 bits (674), Expect = 9.4e-67
Identity = 171/225 (76.00%), Postives = 179/225 (79.56%), Query Frame = 0
Query: 1 MAVPTVLCFGFLLLAGLGLASAARTLLDYDPHTRHYDYDRPSPRIGYDPGHRDESYDNAY 60
MA+ LC FLL GLGLASA RTLLDYDP TRHY YDRPSPR+GYDPGHRDESYDNAY
Sbjct: 1 MAILRALCLAFLLFVGLGLASATRTLLDYDPRTRHYGYDRPSPRVGYDPGHRDESYDNAY 60
Query: 61 GGSSSRGHGIGDSSLGGGFGRYEGGGGRDSGYGGRNDDRGVGYGNGGGYGGVGGHGDGYG 120
GGSSSRGHGIGDS+LGG YEGGG RD GYG RND+RGVGYGNGGGYGGVGGHGDGYG
Sbjct: 61 GGSSSRGHGIGDSALGG--SGYEGGGRRDYGYGDRNDNRGVGYGNGGGYGGVGGHGDGYG 120
Query: 121 SNGGGGYGNRYGPSL-------GGRGSGNGYGD--SRGYGARDNGYGSG---GGVGSGYG 180
+NGGGGYG+RYGPSL GG+GS NGY D S GYG RDNGYG G SGYG
Sbjct: 121 NNGGGGYGDRYGPSLGGSGYGSGGKGSDNGYDDRHSHGYGGRDNGYGDSHGHEGRDSGYG 180
Query: 181 GGSG-SVGYGNGGVHGREYDNSKGSG-EGGYDGGYTVKNSISREN 212
G G S GYGNGGVHG EYDNSKGSG EGGYDGGY VKNSIS+ N
Sbjct: 181 SGGGVSGGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISKGN 223
BLAST of CaUC10G180910 vs. NCBI nr
Match:
XP_038903641.1 (glycine-rich cell wall structural protein 2-like [Benincasa hispida])
HSP 1 Score: 263.8 bits (673), Expect = 1.2e-66
Identity = 173/254 (68.11%), Postives = 182/254 (71.65%), Query Frame = 0
Query: 1 MAVPTVLCFGFLLLAGLGLASAARTLLDYDPHTRHYDYDRPSPRIGYDPGHRDESYDNAY 60
MA+P VLCFG LL LGLASAAR LLDYDP TRHYDYDRPSPR+GYDP HRD SYDN+Y
Sbjct: 1 MAIPRVLCFGLLLFVSLGLASAARILLDYDPRTRHYDYDRPSPRVGYDPSHRDGSYDNSY 60
Query: 61 GGSSSRGHGIGDSSLGGGFGRYEGGGGRDSGYGGRNDDRGVGYGNGGGYGGVGGHGDGYG 120
GG S+RG+GIGDS+LGG GRYEGGG + Y NDDRGVGYGNGGGYGGVGGHGDGYG
Sbjct: 61 GGGSNRGYGIGDSALGGS-GRYEGGGEHNPRYRDGNDDRGVGYGNGGGYGGVGGHGDGYG 120
Query: 121 SNGGGGYGNRYGPSLGGRGSG-------------------------------------NG 180
SNGGGGY RYGPSLGG G G NG
Sbjct: 121 SNGGGGY--RYGPSLGGSGYGNGNGYDQRRDHGVGYGSKGGPESSNAYGDSRGYGARDNG 180
Query: 181 YGDSRGYGARDNGYGSGGGVGSGY-----GGGSGSVGYGNGGVHGREYDNSKGSG-EGGY 212
YGDSRGYGARDNGYGSGGGVG GY GG SGS GYGNGGVHG EYDNSKGSG EGGY
Sbjct: 181 YGDSRGYGARDNGYGSGGGVGGGYGVGGHGGSSGSGGYGNGGVHGGEYDNSKGSGEEGGY 240
BLAST of CaUC10G180910 vs. NCBI nr
Match:
XP_038903421.1 (glycine-rich cell wall structural protein 1.8-like [Benincasa hispida])
HSP 1 Score: 256.1 bits (653), Expect = 2.6e-64
Identity = 168/247 (68.02%), Postives = 178/247 (72.06%), Query Frame = 0
Query: 1 MAVPTVLCFGFLLLAGLGLASAARTLLDYDPHTRHYDYDRPSPRIGYDPGHRDESYDNAY 60
MA VLCFGFL+ GLASAARTLLDYDP TRHYDYDRP+PR+GYDP HRD SYDNAY
Sbjct: 12 MATTRVLCFGFLVFVCFGLASAARTLLDYDPRTRHYDYDRPTPRVGYDPSHRDGSYDNAY 71
Query: 61 GGSSSRGHGIGDSSLGGGFGRYEGGGGRDSGYGGRNDDRGVGYGNGGGYGGVGGHGDGYG 120
G SS RG+GIGDS+LGG G+YEG G DSGYGGRNDDRGVGYGNGGGYGG+ GHG+GYG
Sbjct: 72 GRSSGRGYGIGDSALGGS-GQYEGDRGHDSGYGGRNDDRGVGYGNGGGYGGIEGHGNGYG 131
Query: 121 SNGGGGYGNRYGPSLGGRG------------------------SGNGYGDSRGYGARDNG 180
NGGG Y NR GPSLGG G S NGYGDSRGY ARDNG
Sbjct: 132 RNGGGSYENRDGPSLGGSGYGSGDGYDQGRDHGVGYGSRGGADSSNGYGDSRGYQARDNG 191
Query: 181 -------YGSGGGVGSGY-----GGGSGSVGYGNGGVHGREYDNSKGSGEGGYDGGYTVK 212
YGSGGG G GY GGG GS GYGNGGVHG EYDN+KGSGEGGYDGGY VK
Sbjct: 192 YGAHDNVYGSGGGAGGGYGVGGHGGGIGSGGYGNGGVHGGEYDNNKGSGEGGYDGGYAVK 251
BLAST of CaUC10G180910 vs. NCBI nr
Match:
KAE8650023.1 (hypothetical protein Csa_011563 [Cucumis sativus])
HSP 1 Score: 245.0 bits (624), Expect = 5.9e-61
Identity = 168/257 (65.37%), Postives = 182/257 (70.82%), Query Frame = 0
Query: 1 MAVPTVLCFGFLLLAGLGLASAARTLLDYDPHTRHYDYDRPSPRIGYDPGHRDESYDNAY 60
MA+P VLC GFLL GLGLASAARTLLDYDP TR YDYD P+PR+GYDP HRD+SYD+AY
Sbjct: 1 MAIPKVLCIGFLLFVGLGLASAARTLLDYDPRTRRYDYDHPTPRVGYDPSHRDQSYDSAY 60
Query: 61 GGSSSRGHGIGDSSLGGGFGRYEGGGGRDS------------------------------ 120
GSSS+G+G+GDS+LGG GRYEGGGGRDS
Sbjct: 61 SGSSSKGYGVGDSALGGS-GRYEGGGGRDSGYGGRNDDRGAGYGGRNDDHGAGYGSRNDD 120
Query: 121 ---GYGGRNDDRGVGYGNGGGYGGVGGHGDGYGSNGGGGYGNRYGPSL-------GGRGS 180
GYGGRNDDRGVGYGNGGGYG VGGHGDGYG+NGGG YG+RYGPSL GG+GS
Sbjct: 121 HGAGYGGRNDDRGVGYGNGGGYGSVGGHGDGYGNNGGGSYGDRYGPSLGGSGYGSGGKGS 180
Query: 181 GNGYGD-SRGYGARDNGYGSG---GGVGSGYGGGSG-SVGYGNGGVHGREYDNSKGSG-E 212
GNGY D SRG GARDN YG G SGYG G G S GYGNGGVHG E+DNSKGSG E
Sbjct: 181 GNGYDDHSRGNGARDNNYGDSHGHEGRDSGYGSGGGVSGGYGNGGVHGGEHDNSKGSGEE 240
BLAST of CaUC10G180910 vs. ExPASy Swiss-Prot
Match:
O70133 (ATP-dependent RNA helicase A OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=2)
HSP 1 Score: 46.2 bits (108), Expect = 5.3e-04
Identity = 78/181 (43.09%), Postives = 88/181 (48.62%), Query Frame = 0
Query: 34 RHYDYDRPSPRIGYDPGHRDESYDNAYGGSSSRGHGIGDSSLGGGFGRYEGGGGRDSGYG 93
R+ D RP YD G Y YGG G G G GGFG GG G G+G
Sbjct: 1155 RYGDGPRPPKMARYDNG---SGYRRGYGGGGYGGGGYGGGYGSGGFG---GGFGSGGGFG 1214
Query: 94 GRNDDRGVGYGNGG-----GYGGVGGHGDGYGSNGGGGYGNRYGPSLGGRGSGNGYGD-S 153
G + G G+G+GG G GG GG G G+ GGGG+G G GG G G+G+
Sbjct: 1215 GGFNSGGGGFGSGGGGFGSGGGGFGGGGGGFSGGGGGGFGGGRGGGGGGFGGSGGFGNGG 1274
Query: 154 RGYGARDNGYGSGGGVGSGYGGGSGSVGYGNGGVHGRE--------YDNSKGSGEGGYDG 201
GYG GYG GG G GYGGGSG GYG GG G E Y + G G GGY G
Sbjct: 1275 GGYGVGGGGYGGGG--GGGYGGGSG--GYGGGGYGGGEGYSISPNSYRGNYGGGGGGYRG 1325
BLAST of CaUC10G180910 vs. ExPASy TrEMBL
Match:
A0A5A7UHU2 (Glycine-rich cell wall structural protein 1.8-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G001580 PE=4 SV=1)
HSP 1 Score: 264.2 bits (674), Expect = 4.6e-67
Identity = 171/225 (76.00%), Postives = 179/225 (79.56%), Query Frame = 0
Query: 1 MAVPTVLCFGFLLLAGLGLASAARTLLDYDPHTRHYDYDRPSPRIGYDPGHRDESYDNAY 60
MA+ LC FLL GLGLASA RTLLDYDP TRHY YDRPSPR+GYDPGHRDESYDNAY
Sbjct: 1 MAILRALCLAFLLFVGLGLASATRTLLDYDPRTRHYGYDRPSPRVGYDPGHRDESYDNAY 60
Query: 61 GGSSSRGHGIGDSSLGGGFGRYEGGGGRDSGYGGRNDDRGVGYGNGGGYGGVGGHGDGYG 120
GGSSSRGHGIGDS+LGG YEGGG RD GYG RND+RGVGYGNGGGYGGVGGHGDGYG
Sbjct: 61 GGSSSRGHGIGDSALGG--SGYEGGGRRDYGYGDRNDNRGVGYGNGGGYGGVGGHGDGYG 120
Query: 121 SNGGGGYGNRYGPSL-------GGRGSGNGYGD--SRGYGARDNGYGSG---GGVGSGYG 180
+NGGGGYG+RYGPSL GG+GS NGY D S GYG RDNGYG G SGYG
Sbjct: 121 NNGGGGYGDRYGPSLGGSGYGSGGKGSDNGYDDRHSHGYGGRDNGYGDSHGHEGRDSGYG 180
Query: 181 GGSG-SVGYGNGGVHGREYDNSKGSG-EGGYDGGYTVKNSISREN 212
G G S GYGNGGVHG EYDNSKGSG EGGYDGGY VKNSIS+ N
Sbjct: 181 SGGGVSGGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISKGN 223
BLAST of CaUC10G180910 vs. ExPASy TrEMBL
Match:
A0A1S3BMC4 (glycine-rich cell wall structural protein 1.8-like OS=Cucumis melo OX=3656 GN=LOC103491115 PE=4 SV=1)
HSP 1 Score: 264.2 bits (674), Expect = 4.6e-67
Identity = 171/225 (76.00%), Postives = 179/225 (79.56%), Query Frame = 0
Query: 1 MAVPTVLCFGFLLLAGLGLASAARTLLDYDPHTRHYDYDRPSPRIGYDPGHRDESYDNAY 60
MA+ LC FLL GLGLASA RTLLDYDP TRHY YDRPSPR+GYDPGHRDESYDNAY
Sbjct: 1 MAILRALCLAFLLFVGLGLASATRTLLDYDPRTRHYGYDRPSPRVGYDPGHRDESYDNAY 60
Query: 61 GGSSSRGHGIGDSSLGGGFGRYEGGGGRDSGYGGRNDDRGVGYGNGGGYGGVGGHGDGYG 120
GGSSSRGHGIGDS+LGG YEGGG RD GYG RND+RGVGYGNGGGYGGVGGHGDGYG
Sbjct: 61 GGSSSRGHGIGDSALGG--SGYEGGGRRDYGYGDRNDNRGVGYGNGGGYGGVGGHGDGYG 120
Query: 121 SNGGGGYGNRYGPSL-------GGRGSGNGYGD--SRGYGARDNGYGSG---GGVGSGYG 180
+NGGGGYG+RYGPSL GG+GS NGY D S GYG RDNGYG G SGYG
Sbjct: 121 NNGGGGYGDRYGPSLGGSGYGSGGKGSDNGYDDRHSHGYGGRDNGYGDSHGHEGRDSGYG 180
Query: 181 GGSG-SVGYGNGGVHGREYDNSKGSG-EGGYDGGYTVKNSISREN 212
G G S GYGNGGVHG EYDNSKGSG EGGYDGGY VKNSIS+ N
Sbjct: 181 SGGGVSGGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISKGN 223
BLAST of CaUC10G180910 vs. ExPASy TrEMBL
Match:
A0A0A0L1V3 (Glycine-rich protein-1 OS=Cucumis sativus OX=3659 GN=Csa_3G011070 PE=4 SV=1)
HSP 1 Score: 242.3 bits (617), Expect = 1.9e-60
Identity = 164/225 (72.89%), Postives = 174/225 (77.33%), Query Frame = 0
Query: 1 MAVPTVLCFGFLLLAGLGLASAARTLLDYDPHTRHYDYDRPSPRIGYDPGHRDESYDNAY 60
MA+ LC FLL LGLASA RTLLDYDP T Y YDRPSPR+GYDPGH DESYD AY
Sbjct: 1 MAILRALCLAFLLFVRLGLASATRTLLDYDPRTLQYGYDRPSPRVGYDPGHGDESYDKAY 60
Query: 61 GGSSSRGHGIGDSSLGGGFGRYEGGGGRDSGYGGRNDDRGVGYGN-GGGYGGVGGHGDGY 120
GGSSSRGHGIGDS+LGG YEGGG D GYG R++DRGVGYGN GGGYGGVGGHGDGY
Sbjct: 61 GGSSSRGHGIGDSALGG--SGYEGGGRHDYGYGDRHNDRGVGYGNYGGGYGGVGGHGDGY 120
Query: 121 GSNGGGGYGNRYGPSL-------GGRGSGNGYGD-SRGYGARDNGYGSG---GGVGSGYG 180
G+NGGG YG+RYGPSL GG+GSGNGY D SRG GARDN YG GG SGYG
Sbjct: 121 GNNGGGSYGDRYGPSLGGSGYGSGGKGSGNGYDDHSRGNGARDNSYGDSHGHGGRDSGYG 180
Query: 181 GGSG-SVGYGNGGVHGREYDNSKGSG-EGGYDGGYTVKNSISREN 212
G G + GYGNGGVHG EYDNSKGSG EGGYDGGY VKNSIS+ N
Sbjct: 181 SGGGVTGGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISKGN 223
BLAST of CaUC10G180910 vs. ExPASy TrEMBL
Match:
A0A5A7UEU3 (Glycine-rich cell wall structural protein 1.0-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G001560 PE=4 SV=1)
HSP 1 Score: 231.9 bits (590), Expect = 2.5e-57
Identity = 168/294 (57.14%), Postives = 181/294 (61.56%), Query Frame = 0
Query: 1 MAVPTVLCFGFLLLAGLGLASAARTLLDYDPHTRHYDYDRPSPRIGYDPGHRDESYDNAY 60
MA+ LC FLL LGLASAARTLLDYDP TR YDYD P+PR+GYDP HRD+SYDNAY
Sbjct: 1 MAISRALCISFLLFVCLGLASAARTLLDYDPRTRRYDYDHPTPRVGYDPSHRDQSYDNAY 60
Query: 61 GGSSSRGHGIGDSSLGGGFGRYEGGGGRD------------------------------- 120
GGSS+RG+G+GDS+LGG GRYEGGGG D
Sbjct: 61 GGSSNRGYGVGDSALGGS-GRYEGGGGHDYGYGGRNDDRGVGYGGRNDDHGAGYGAGYGG 120
Query: 121 ---------------------------------------SGYGGRNDDRGVGYGNGGGYG 180
+GYGGRNDDRGVGYGNGGGYG
Sbjct: 121 RNDDRGAGYGGRNDDRGAGYGRRNDDHGAGYGGRNDDRGAGYGGRNDDRGVGYGNGGGYG 180
Query: 181 GVGGHGDGYGSNGGGGYGNRYGPSL-------GGRGSGNGYGD-SRGYGARDNGYGSG-- 212
GVGGHGDGYG+N GGGYG+RY PSL GG+GSGNGY D SRGYG DNGYG
Sbjct: 181 GVGGHGDGYGNNVGGGYGDRYSPSLGGSGYGNGGKGSGNGYDDHSRGYGGHDNGYGDSHG 240
BLAST of CaUC10G180910 vs. ExPASy TrEMBL
Match:
A0A1S3BM26 (glycine-rich cell wall structural protein 1.0-like OS=Cucumis melo OX=3656 GN=LOC103491114 PE=4 SV=1)
HSP 1 Score: 231.9 bits (590), Expect = 2.5e-57
Identity = 168/294 (57.14%), Postives = 181/294 (61.56%), Query Frame = 0
Query: 1 MAVPTVLCFGFLLLAGLGLASAARTLLDYDPHTRHYDYDRPSPRIGYDPGHRDESYDNAY 60
MA+ LC FLL LGLASAARTLLDYDP TR YDYD P+PR+GYDP HRD+SYDNAY
Sbjct: 1 MAISRALCISFLLFVCLGLASAARTLLDYDPRTRRYDYDHPTPRVGYDPSHRDQSYDNAY 60
Query: 61 GGSSSRGHGIGDSSLGGGFGRYEGGGGRD------------------------------- 120
GGSS+RG+G+GDS+LGG GRYEGGGG D
Sbjct: 61 GGSSNRGYGVGDSALGGS-GRYEGGGGHDYGYGGRNDDRGVGYGGRNDDHGAGYGAGYGG 120
Query: 121 ---------------------------------------SGYGGRNDDRGVGYGNGGGYG 180
+GYGGRNDDRGVGYGNGGGYG
Sbjct: 121 RNDDRGAGYGGRNDDRGAGYGRRNDDHGAGYGGRNDDRGAGYGGRNDDRGVGYGNGGGYG 180
Query: 181 GVGGHGDGYGSNGGGGYGNRYGPSL-------GGRGSGNGYGD-SRGYGARDNGYGSG-- 212
GVGGHGDGYG+N GGGYG+RY PSL GG+GSGNGY D SRGYG DNGYG
Sbjct: 181 GVGGHGDGYGNNVGGGYGDRYSPSLGGSGYGNGGKGSGNGYDDHSRGYGGHDNGYGDSHG 240
BLAST of CaUC10G180910 vs. TAIR 10
Match:
AT2G36120.1 (Glycine-rich protein family )
HSP 1 Score: 43.5 bits (101), Expect = 2.4e-04
Identity = 89/210 (42.38%), Postives = 98/210 (46.67%), Query Frame = 0
Query: 7 LCFGFLLLAGLGLASAARTLL---DYDPHTRHYDYDRP-----SPRIGYDPGHRDESYDN 66
LCF L GLGL SA R LL + + Y + IG PG +
Sbjct: 10 LCF----LIGLGLCSARRALLSSSESEAEVAAYGVNSGLSAGLGVGIGGGPGG-----GS 69
Query: 67 AYGGSSSRGHGI---GDSSLGGGFGRYEGGGGRDSGYGGRNDDRGVGYGNGG--GYGG-- 126
YGG S G G G+ +GGG G GGG G GG G G G GG GYGG
Sbjct: 70 GYGGGSGEGGGAGGHGEGHIGGGGGGGHGGGAGGGGGGGPGGGYGGGSGEGGGAGYGGGE 129
Query: 127 VGGHGDGYGSNGGGGYGNRYGPSLGGRGSGNGYGDSRGYGARD-NGYGSGGGVGSGYGGG 186
GGHG G G GGG G G GG G G G G GYG G+G GGG G+G GGG
Sbjct: 130 AGGHGGGGGGGAGGGGGGGGGAHGGGYGGGQGAGAGGGYGGGGAGGHGGGGGGGNGGGGG 189
Query: 187 SGSVGYGNGGVHGREYDNSKGSGEGGYDGG 201
GS G GG HG Y G+GE GY GG
Sbjct: 190 GGS---GEGGAHGGGYGAGGGAGE-GYGGG 206
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038903414.1 | 4.4e-72 | 68.34 | glycine-rich cell wall structural protein 1.8-like [Benincasa hispida] | [more] |
XP_008449165.1 | 9.4e-67 | 76.00 | PREDICTED: glycine-rich cell wall structural protein 1.8-like [Cucumis melo] >KA... | [more] |
XP_038903641.1 | 1.2e-66 | 68.11 | glycine-rich cell wall structural protein 2-like [Benincasa hispida] | [more] |
XP_038903421.1 | 2.6e-64 | 68.02 | glycine-rich cell wall structural protein 1.8-like [Benincasa hispida] | [more] |
KAE8650023.1 | 5.9e-61 | 65.37 | hypothetical protein Csa_011563 [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
O70133 | 5.3e-04 | 43.09 | ATP-dependent RNA helicase A OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=2 | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7UHU2 | 4.6e-67 | 76.00 | Glycine-rich cell wall structural protein 1.8-like OS=Cucumis melo var. makuwa O... | [more] |
A0A1S3BMC4 | 4.6e-67 | 76.00 | glycine-rich cell wall structural protein 1.8-like OS=Cucumis melo OX=3656 GN=LO... | [more] |
A0A0A0L1V3 | 1.9e-60 | 72.89 | Glycine-rich protein-1 OS=Cucumis sativus OX=3659 GN=Csa_3G011070 PE=4 SV=1 | [more] |
A0A5A7UEU3 | 2.5e-57 | 57.14 | Glycine-rich cell wall structural protein 1.0-like OS=Cucumis melo var. makuwa O... | [more] |
A0A1S3BM26 | 2.5e-57 | 57.14 | glycine-rich cell wall structural protein 1.0-like OS=Cucumis melo OX=3656 GN=LO... | [more] |
Match Name | E-value | Identity | Description | |
AT2G36120.1 | 2.4e-04 | 42.38 | Glycine-rich protein family | [more] |