CaUC10G180560 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC10G180560
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Unknown protein
Location	Ciama_Chr10: 1254389 .. 1255133 (-)
RNA-Seq Expression	CaUC10G180560
Synteny	CaUC10G180560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGTGGATATTTGAGCTTCTAACATTTTCGTTGATTATTTATTATCTTATATATTTTGAAACCACCGACAAAGAAACTATAATAATTATTTCGTTTAAAAAAATCATCATGGGTTGGTCCAGTAATAGCATAAACACATAAAAAAAAAAGTCAATAGATCATAAGTTCAATCTATGGTGTGGCTACCCCACATTTAAGTTAAATTTTTACTGCTAGTTTGTGACAAGTTAGTATAGAAAATTTTCTCAAAATGTGTAGTTCATCCACGTGGCACGACCAACTGTCAACTGACTAAGGGAAAACAAAGGAGACTTACAGTTGCATTTCTCTAGGAGGGCAATCGAAGCCCATAAAGCTCTTAAACCATCCCTGAGGCGGCTCCGTCGGAGTTCCACTAATCTGGCTGATAATCAACGGAAAAACAACCGGAATCAACAACGTCAATACAAACAACGAGCAAAGTTCGTAGAAACACCATCCCACAATCTCCACAATCGTCGGCCTTTCTCCATGCCCTTCGTACGCTCTATACACCTCCTTCGCCCTCTCCAGCTTCGCCGCCGTGCTGTGGAAATCCGGCGTCTGCCTCCGGCTTCCGCCGCCGCCGCTCGCCGACCTCGGCGTCGACATGCTTCGGCCGCTGGCTGACTTCGGGGGCGGTAAGTTTTGGATCTCCGTTGGCTTTGGTTTAGGGCTCTGCTCTGCCATGGCGATAGAGATTTGCTGCTCGCAAGGTGTTTGA

mRNA sequence

ATGAAGAGGGCAATCGAAGCCCATAAAGCTCTTAAACCATCCCTGAGGCGGCTCCGTCGGAGTTCCACTAATCTGGCTGATAATCAACGGAAAAACAACCGGAATCAACAACGTCAATACAAACAACGAGCAAAGTTCAAACACCATCCCACAATCTCCACAATCGTCGGCCTTTCTCCATGCCCTTCGTACGCTCTATACACCTCCTTCGCCCTCTCCAGCTTCGCCGCCGTGCTGTGGAAATCCGGCGTCTGCCTCCGGCTTCCGCCGCCGCCGCTCGCCGACCTCGGCGTCGACATGCTTCGGCCGCTGGCTGACTTCGGGGGCGGTAAGTTTTGGATCTCCGTTGGCTTTGGTTTAGGGCTCTGCTCTGCCATGGCGATAGAGATTTGCTGCTCGCAAGGTGTTTGA

Coding sequence (CDS)

ATGAAGAGGGCAATCGAAGCCCATAAAGCTCTTAAACCATCCCTGAGGCGGCTCCGTCGGAGTTCCACTAATCTGGCTGATAATCAACGGAAAAACAACCGGAATCAACAACGTCAATACAAACAACGAGCAAAGTTCAAACACCATCCCACAATCTCCACAATCGTCGGCCTTTCTCCATGCCCTTCGTACGCTCTATACACCTCCTTCGCCCTCTCCAGCTTCGCCGCCGTGCTGTGGAAATCCGGCGTCTGCCTCCGGCTTCCGCCGCCGCCGCTCGCCGACCTCGGCGTCGACATGCTTCGGCCGCTGGCTGACTTCGGGGGCGGTAAGTTTTGGATCTCCGTTGGCTTTGGTTTAGGGCTCTGCTCTGCCATGGCGATAGAGATTTGCTGCTCGCAAGGTGTTTGA

Protein sequence

MKRAIEAHKALKPSLRRLRRSSTNLADNQRKNNRNQQRQYKQRAKFKHHPTISTIVGLSPCPSYALYTSFALSSFAAVLWKSGVCLRLPPPPLADLGVDMLRPLADFGGGKFWISVGFGLGLCSAMAIEICCSQGV

Homology

The following BLAST results are available for this feature:

BLAST of CaUC10G180560 vs.


Match Name	E-value	Identity	Description

BLAST of CaUC10G180560 vs.


Match Name	E-value	Identity	Description

BLAST of CaUC10G180560 vs.


Match Name	E-value	Identity	Description

BLAST of CaUC10G180560 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..35
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..45

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC10G180560.1	CaUC10G180560.1	mRNA