CaUC10G180470 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATATTATTTAATGATTAGAAGAAATAGATATTTTTTTCACAAAATTTTCATAGTGCCACACTGAAACGGCGTCGTAGGGGGACCATTACTCGAACAATTATTGGCAAATTTATTGGGGAGTGGTTAGCCGTAGGCAGCCATTCTAGAACAGAGAAAAATACGTTGAAGTTCGTGTTCGTGGCCACCACACGTCTGAACCTGCTCCTTCTCTCTTCTTGGCTGCGATTTTCCGGCTTCAATCACTCGCCGGGACTCACTTTCTACGGTATTTTCTTTCCTTTCAAACGCTTCTGATTTTTCTTTCCTTCATTTTCAATGTTTTTCGATGTCAATTTTGTAGTTTCTTCATCTTCTAGCTCAAAGAAAATTCAATTTGTAGGGTTACATGTGATCAGATACTTGTTTTCCGAATTCTCCCGATTCTGGAATTTCAGTGTGTGTGTTTTTAATGCTATTTTGTGCGAATTACTCTCTCGTTGCGGGAGCATGATGTATGATTGATTTTACTGCTGGAGAAATTCATACGGCTTTCTTTTTGTTCTTCCCGTTCGGTGTATTTCTATTGATTTTTCTAGATTTTCCTTCGTGTGGTTGGTTAGTGATTTGAAAGGTTTAATTGGAATCATCTCTCATTTGGGTGTAATGATATAGACTGTTTATTGTTCATCAGTTATCATTGTCAATTTCTCTTCGAATTTGCTCGATTATGGTTGTCGAAGATTGACGGAGAATCATCTTTATGATGTGTTTTTTTCTTGTTTTTATGAGTTTGATTTAGCTCTGGCCTCCGTGTGAGGGTGGTTATACCTTGAAATTTAAAAGTATGAATTTCTAACATCTAATATTTGAGGAAGAGCAAACTACCTTTTGTTGGCTTTTTTGGAATTGGGGAGTGTGAAGCAAGTAAAGTGACTATGGGGTAGGATCAAACTCCCTAAAAGGAAAACTCAGTCTATTAATGCGACCGTTATCGTCTGAGATTAGTTGGGGTGCATATAAGCTAGCTCGGATTACTCACAGTATAAAAAGCAAATAGAAATTGAAGAGAAACTATGATTCAAAATAAATTGATATCTTTACGGTGTTATCTTTTATAAAGTTCCTTCGTTCTTTGCTTTTGCCTTGTGTCTTAAAACATGGAAGTTGATAAATATTTGTCCTAGAGGGCATCTGACCTTTCTACTTTCTATCCCCTTTTGTTTCTTAACCCTATATTTTTGCAGGAAAAATCTTATTAAGAAGTAGTAATGGACTTTATATTAAGAGGAATGAATGATGAGGCATCTGGGTGCTACTCTAATGATATGGACATCCAGAGATGCCCGTTCCTCAGGAATATCAATAAACCAACCTGCTTTTCCTTCTCCACCTTGAATATCACCTTCCCGGTAACTTCCATATCTGGTCTACCGCTACACATTTGCAAAATTGCAATGGCCGATCACGTTTAGAGAAGTCAATATATTATTTTTGAATTTTCAGGTTCGGGGAGCGAAAGGGCCAATTTTTGAGGAGGGTCCTAATTTTGACACAGCATTTAAGCTCTTTCATGGTAAAGATGGGGTTGTCCCACTATCTGAGAGATCCGGCTTTGAGAAAATATCGTTAGAAGCGGAGATGGCTCCTCAGTTCAACCCCTTGGCTGCAAAAGCTGCAACCATCAGTCTGTCAGCTTTTGGACCAGGAGGGCCATTCAGCTTCGGTAACTTCTCTGAGAAATGGAAGAAACAAAAGTCTGAGGCATCCAACAAGAAAGATCATTTGTCACAGGTATATGTGCATTCTTCTTAACCATTAAACTTGGGACACAAAGTTAGATCATCCGTACTACTTTTTTTAAGGGATGCCTACTTCAGTGGAGACTGAATTTCAGAATTTAATATAATTTGCTCCAAAAAATGTGATTGTCGTTGGCTTCTGTTGCTAGAAAAGAGCCAGAATTTGACAGGCATAAAAATCTTGAATCTAGCATGGTCATGAAGGAAAGCTAGAAAATATGGGACTTGAACTTGGGAAAACATCACACGTGGAGTGGGGGATAGTCTGATAATATGATGTTTGGAAGACTTTTACTCTGTCTATTTTCCTTAAGATTTGAAGGGATTTAAATCCTGATGGATTACAAACGAGTATTTTCGTTTGTCATCCCTTAAAATGGTCAAAGTATACAAGATTTTAAAGAACATATCTCATTAAAACAAAAAGATTTCATAGTCAATTATTAATTTAATTTCACTAGGTTTCACTTTTCATTTACAAATTTATACAAGATTTTAAAGAAAATATCTCAATAAAACAAAAAGATTTCTTAGTCCATTATTAATTTACTTTCACTAGGTTTCACTTTTCATTCACAAATTAAGATTTTAAAGTGTTCTCTTCTTGCCTGCCCCCTTCTTTCGAAAAGACGAAAATGGTTATATTTGTAGAATCCTTATTTTCTTTTCATTTCTATCAGATAGTCCGAACAAAATTGTTTAATCAAATAAATTTCAGGTCTTTCTTTTTCCAAACAAGACAACAATTTTAAGATCGTTTCTAAATTTTCAGTTTGTATAATAGTCGTTGGTAAGCCTTTGCTCATGAACCTTCTTTCTGTGTTTATTTCATTTCTGTTTCTTGATGTTTTCCAGAAAAAAGGAAGTTCATCCAAGCACGAGGCTCTGGGAAGTGAGTGGTTGGAAACAGGAAACTGCCCAATTGCGAAGTCTTTTAGAGCTGTTAGCGGAGTCCTCCCACTTGTTGCAACAGCTTTTCAGCTACCACCTGGCATGAAGCTTAAGTGCCCGCCCGCTATAGTTGCTGCCCGTGCTGCCCTAGCTCGTACAGCATTTGTAAAAAATCTGCGTCCTCAGCCACTTCCTTCAAAAATGCTTGTCATTGCGGCCTTAGGCATGGCGGCAAACGTTCCTCTTGGTATATGGAGGGAGCACACTAAGAAATTTTCGTTTTCATGGTTTGTAGCAATTCATGCAGCTGTACCCTTTATTGCCATGCTTCGGAAATCTGTCTTGATGCCAAAGACAGCCATGGCAATGACCATTGCTGCTTCTGTACTAGGGCAGGTTATCGGCTCAAGGGCTGAACGTATGCGACTGAAAGCTATTGCTGAAAAGGGAAAGGCAACAACAATTATGCCAACACTAGAGTCTACTCCAAGCTATGAGTTAACCCAGGTCGATGCCATAGTAGGTGGTCGTTGTGGTGTAGAAAGAATGGTGTTTGATCCTCTCCAGAAGAATGGTAGGCAAACGTCTTCCCCAGCGAATGTATGCTCATAAGGCGACTTCGTATAGATACAAGCATATTATGAAATAAATGAAGTGCCATTGATATTGTTAATGGGACTCAACCTGTTATGAAATGTAGATTTAATGGATATTCAACCTCTGTCATGGTTGGCTATCATATAATGTTATGTATTATGCTTTTGAAAAGCTTCTCTTTAGCTAAATATAAATGAAAAATCCTTCTTATAGACTTGTTTAATATGAAAAAAAAGGCTTGTAATGTTATCTCAGTTCATGTTGCCTTCTGAAGTGCCCCTACAAGATGGTGATTATGGAATGGACAATAATAATTATTGTGCACTAATATATCTTTCAATCTTGATATTTCAA ATATTATTTAATGATTAGAAGAAATAGATATTTTTTTCACAAAATTTTCATAGTGCCACACTGAAACGGCGTCGTAGGGGGACCATTACTCGAACAATTATTGGCAAATTTATTGGGGAGTGGTTAGCCGTAGGCAGCCATTCTAGAACAGAGAAAAATACGTTGAAGTTCGTGTTCGTGGCCACCACACGTCTGAACCTGCTCCTTCTCTCTTCTTGGCTGCGATTTTCCGGCTTCAATCACTCGCCGGGACTCACTTTCTACGGAAAAATCTTATTAAGAAGTAGTAATGGACTTTATATTAAGAGGAATGAATGATGAGGCATCTGGGTGCTACTCTAATGATATGGACATCCAGAGATGCCCGTTCCTCAGGAATATCAATAAACCAACCTGCTTTTCCTTCTCCACCTTGAATATCACCTTCCCGGTTCGGGGAGCGAAAGGGCCAATTTTTGAGGAGGGTCCTAATTTTGACACAGCATTTAAGCTCTTTCATGGTAAAGATGGGGTTGTCCCACTATCTGAGAGATCCGGCTTTGAGAAAATATCGTTAGAAGCGGAGATGGCTCCTCAGTTCAACCCCTTGGCTGCAAAAGCTGCAACCATCAGTCTGTCAGCTTTTGGACCAGGAGGGCCATTCAGCTTCGGTAACTTCTCTGAGAAATGGAAGAAACAAAAGTCTGAGGCATCCAACAAGAAAGATCATTTGTCACAGCATGGTCATGAAGGAAAGCTAGAAAATATGGGACTTGAACTTGGGAAAACATCACACGTGGAGTGGGGGATAAAAAAAGGAAGTTCATCCAAGCACGAGGCTCTGGGAAGTGAGTGGTTGGAAACAGGAAACTGCCCAATTGCGAAGTCTTTTAGAGCTGTTAGCGGAGTCCTCCCACTTGTTGCAACAGCTTTTCAGCTACCACCTGGCATGAAGCTTAAGTGCCCGCCCGCTATAGTTGCTGCCCGTGCTGCCCTAGCTCGTACAGCATTTGTAAAAAATCTGCGTCCTCAGCCACTTCCTTCAAAAATGCTTGTCATTGCGGCCTTAGGCATGGCGGCAAACGTTCCTCTTGGTATATGGAGGGAGCACACTAAGAAATTTTCGTTTTCATGGTTTGTAGCAATTCATGCAGCTGTACCCTTTATTGCCATGCTTCGGAAATCTGTCTTGATGCCAAAGACAGCCATGGCAATGACCATTGCTGCTTCTGTACTAGGGCAGGTTATCGGCTCAAGGGCTGAACGTATGCGACTGAAAGCTATTGCTGAAAAGGGAAAGGCAACAACAATTATGCCAACACTAGAGTCTACTCCAAGCTATGAGTTAACCCAGGTCGATGCCATAGTAGGTGGTCGTTGTGGTGTAGAAAGAATGGTGTTTGATCCTCTCCAGAAGAATGGTAGGCAAACGTCTTCCCCAGCGAATGTATGCTCATAAGGCGACTTCGTATAGATACAAGCATATTATGAAATAAATGAAGTGCCATTGATATTGTTAATGGGACTCAACCTGTTATGAAATGTAGATTTAATGGATATTCAACCTCTGTCATGGTTGGCTATCATATAATGTTATGTATTATGCTTTTGAAAAGCTTCTCTTTAGCTAAATATAAATGAAAAATCCTTCTTATAGACTTGTTTAATATGAAAAAAAAGGCTTGTAATGTTATCTCAGTTCATGTTGCCTTCTGAAGTGCCCCTACAAGATGGTGATTATGGAATGGACAATAATAATTATTGTGCACTAATATATCTTTCAATCTTGATATTTCAA ATGGACTTTATATTAAGAGGAATGAATGATGAGGCATCTGGGTGCTACTCTAATGATATGGACATCCAGAGATGCCCGTTCCTCAGGAATATCAATAAACCAACCTGCTTTTCCTTCTCCACCTTGAATATCACCTTCCCGGTTCGGGGAGCGAAAGGGCCAATTTTTGAGGAGGGTCCTAATTTTGACACAGCATTTAAGCTCTTTCATGGTAAAGATGGGGTTGTCCCACTATCTGAGAGATCCGGCTTTGAGAAAATATCGTTAGAAGCGGAGATGGCTCCTCAGTTCAACCCCTTGGCTGCAAAAGCTGCAACCATCAGTCTGTCAGCTTTTGGACCAGGAGGGCCATTCAGCTTCGGTAACTTCTCTGAGAAATGGAAGAAACAAAAGTCTGAGGCATCCAACAAGAAAGATCATTTGTCACAGCATGGTCATGAAGGAAAGCTAGAAAATATGGGACTTGAACTTGGGAAAACATCACACGTGGAGTGGGGGATAAAAAAAGGAAGTTCATCCAAGCACGAGGCTCTGGGAAGTGAGTGGTTGGAAACAGGAAACTGCCCAATTGCGAAGTCTTTTAGAGCTGTTAGCGGAGTCCTCCCACTTGTTGCAACAGCTTTTCAGCTACCACCTGGCATGAAGCTTAAGTGCCCGCCCGCTATAGTTGCTGCCCGTGCTGCCCTAGCTCGTACAGCATTTGTAAAAAATCTGCGTCCTCAGCCACTTCCTTCAAAAATGCTTGTCATTGCGGCCTTAGGCATGGCGGCAAACGTTCCTCTTGGTATATGGAGGGAGCACACTAAGAAATTTTCGTTTTCATGGTTTGTAGCAATTCATGCAGCTGTACCCTTTATTGCCATGCTTCGGAAATCTGTCTTGATGCCAAAGACAGCCATGGCAATGACCATTGCTGCTTCTGTACTAGGGCAGGTTATCGGCTCAAGGGCTGAACGTATGCGACTGAAAGCTATTGCTGAAAAGGGAAAGGCAACAACAATTATGCCAACACTAGAGTCTACTCCAAGCTATGAGTTAACCCAGGTCGATGCCATAGTAGGTGGTCGTTGTGGTGTAGAAAGAATGGTGTTTGATCCTCTCCAGAAGAATGGTAGGCAAACGTCTTCCCCAGCGAATGTATGCTCATAA MDFILRGMNDEASGCYSNDMDIQRCPFLRNINKPTCFSFSTLNITFPVRGAKGPIFEEGPNFDTAFKLFHGKDGVVPLSERSGFEKISLEAEMAPQFNPLAAKAATISLSAFGPGGPFSFGNFSEKWKKQKSEASNKKDHLSQHGHEGKLENMGLELGKTSHVEWGIKKGSSSKHEALGSEWLETGNCPIAKSFRAVSGVLPLVATAFQLPPGMKLKCPPAIVAARAALARTAFVKNLRPQPLPSKMLVIAALGMAANVPLGIWREHTKKFSFSWFVAIHAAVPFIAMLRKSVLMPKTAMAMTIAASVLGQVIGSRAERMRLKAIAEKGKATTIMPTLESTPSYELTQVDAIVGGRCGVERMVFDPLQKNGRQTSSPANVCS Homology
BLAST of CaUC10G180470 vs. NCBI nr
Match: XP_038904883.1 (uncharacterized protein LOC120091115 [Benincasa hispida] >XP_038904884.1 uncharacterized protein LOC120091115 [Benincasa hispida] >XP_038905444.1 uncharacterized protein LOC120091474 [Benincasa hispida]) HSP 1 Score: 654.1 bits (1686), Expect = 7.6e-184 Identity = 334/382 (87.43%), Postives = 346/382 (90.58%), Query Frame = 0
BLAST of CaUC10G180470 vs. NCBI nr
Match: XP_008448595.1 (PREDICTED: uncharacterized protein LOC103490724 [Cucumis melo] >KAA0052993.1 putative transmembrane protein [Cucumis melo var. makuwa] >TYK11449.1 putative transmembrane protein [Cucumis melo var. makuwa]) HSP 1 Score: 654.1 bits (1686), Expect = 7.6e-184 Identity = 333/382 (87.17%), Postives = 347/382 (90.84%), Query Frame = 0
BLAST of CaUC10G180470 vs. NCBI nr
Match: XP_004146123.1 (uncharacterized protein LOC101211606 [Cucumis sativus] >KGN55693.1 hypothetical protein Csa_009838 [Cucumis sativus]) HSP 1 Score: 645.2 bits (1663), Expect = 3.6e-181 Identity = 330/382 (86.39%), Postives = 346/382 (90.58%), Query Frame = 0
BLAST of CaUC10G180470 vs. NCBI nr
Match: KAG7015791.1 (hypothetical protein SDJN02_23429 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 644.8 bits (1662), Expect = 4.6e-181 Identity = 328/382 (85.86%), Postives = 342/382 (89.53%), Query Frame = 0
BLAST of CaUC10G180470 vs. NCBI nr
Match: XP_022923335.1 (uncharacterized protein LOC111431059 [Cucurbita moschata] >XP_022923336.1 uncharacterized protein LOC111431059 [Cucurbita moschata]) HSP 1 Score: 642.9 bits (1657), Expect = 1.8e-180 Identity = 327/382 (85.60%), Postives = 341/382 (89.27%), Query Frame = 0
BLAST of CaUC10G180470 vs. ExPASy TrEMBL
Match: A0A5D3CML1 (Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G001060 PE=4 SV=1) HSP 1 Score: 654.1 bits (1686), Expect = 3.7e-184 Identity = 333/382 (87.17%), Postives = 347/382 (90.84%), Query Frame = 0
BLAST of CaUC10G180470 vs. ExPASy TrEMBL
Match: A0A1S3BK30 (uncharacterized protein LOC103490724 OS=Cucumis melo OX=3656 GN=LOC103490724 PE=4 SV=1) HSP 1 Score: 654.1 bits (1686), Expect = 3.7e-184 Identity = 333/382 (87.17%), Postives = 347/382 (90.84%), Query Frame = 0
BLAST of CaUC10G180470 vs. ExPASy TrEMBL
Match: A0A0A0L1Q1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G005570 PE=4 SV=1) HSP 1 Score: 645.2 bits (1663), Expect = 1.7e-181 Identity = 330/382 (86.39%), Postives = 346/382 (90.58%), Query Frame = 0
BLAST of CaUC10G180470 vs. ExPASy TrEMBL
Match: A0A6J1E6J0 (uncharacterized protein LOC111431059 OS=Cucurbita moschata OX=3662 GN=LOC111431059 PE=4 SV=1) HSP 1 Score: 642.9 bits (1657), Expect = 8.5e-181 Identity = 327/382 (85.60%), Postives = 341/382 (89.27%), Query Frame = 0
BLAST of CaUC10G180470 vs. ExPASy TrEMBL
Match: A0A6J1HNE2 (uncharacterized protein LOC111465188 OS=Cucurbita maxima OX=3661 GN=LOC111465188 PE=4 SV=1) HSP 1 Score: 642.5 bits (1656), Expect = 1.1e-180 Identity = 328/383 (85.64%), Postives = 342/383 (89.30%), Query Frame = 0
BLAST of CaUC10G180470 vs. TAIR 10
Match: AT5G45410.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G25030.2); Has 124 Blast hits to 124 proteins in 34 species: Archae - 2; Bacteria - 31; Metazoa - 0; Fungi - 0; Plants - 91; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 399.8 bits (1026), Expect = 2.4e-111 Identity = 214/341 (62.76%), Postives = 247/341 (72.43%), Query Frame = 0
BLAST of CaUC10G180470 vs. TAIR 10
Match: AT5G45410.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G25030.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 399.8 bits (1026), Expect = 2.4e-111 Identity = 214/341 (62.76%), Postives = 247/341 (72.43%), Query Frame = 0
BLAST of CaUC10G180470 vs. TAIR 10
Match: AT5G45410.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G25030.2); Has 124 Blast hits to 124 proteins in 34 species: Archae - 2; Bacteria - 31; Metazoa - 0; Fungi - 0; Plants - 91; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 399.8 bits (1026), Expect = 2.4e-111 Identity = 214/341 (62.76%), Postives = 247/341 (72.43%), Query Frame = 0
BLAST of CaUC10G180470 vs. TAIR 10
Match: AT4G25030.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G45410.3); Has 125 Blast hits to 125 proteins in 36 species: Archae - 2; Bacteria - 31; Metazoa - 0; Fungi - 4; Plants - 88; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 369.8 bits (948), Expect = 2.7e-102 Identity = 201/343 (58.60%), Postives = 241/343 (70.26%), Query Frame = 0
BLAST of CaUC10G180470 vs. TAIR 10
Match: AT4G25030.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G45410.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 369.8 bits (948), Expect = 2.7e-102 Identity = 201/343 (58.60%), Postives = 241/343 (70.26%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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