CaUC10G180380 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC10G180380
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
LocationCiama_Chr10: 1059736 .. 1060074 (-)
RNA-Seq ExpressionCaUC10G180380
SyntenyCaUC10G180380
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCTTGCTTGAAGAAGACGCTAACCAAACTCGCTGCATTTGTCCGCCGCTGCCTCCTTCGCCGGCGACGTTCTCGACGTCCGAGATCATTCGTTTCCGACGATCGGATGATAGAGATACGGATTGTCTTCGAAGAGCAGAGGAGAATCGCTGAGAGTGCTGCGAATTCAAGCAGCGGAAGGTGGGAGGTGGATGTCGATCAGCGAGCGGAGATTTTCATTGATGATTTCCGCCGTCAATTGAGGTTAGAGAGACAGATTTCTTTGCATTATAGAGTTGAAACAGAGTATGAAGAGAGATGGCCGCCACCGCCGCCGATTTCGCCGCCGATTTGA

mRNA sequence

ATGGCTTCTTGCTTGAAGAAGACGCTAACCAAACTCGCTGCATTTGTCCGCCGCTGCCTCCTTCGCCGGCGACGTTCTCGACGTCCGAGATCATTCGTTTCCGACGATCGGATGATAGAGATACGGATTGTCTTCGAAGAGCAGAGGAGAATCGCTGAGAGTGCTGCGAATTCAAGCAGCGGAAGGTGGGAGGTGGATGTCGATCAGCGAGCGGAGATTTTCATTGATGATTTCCGCCGTCAATTGAGGTTAGAGAGACAGATTTCTTTGCATTATAGAGTTGAAACAGAGTATGAAGAGAGATGGCCGCCACCGCCGCCGATTTCGCCGCCGATTTGA

Coding sequence (CDS)

ATGGCTTCTTGCTTGAAGAAGACGCTAACCAAACTCGCTGCATTTGTCCGCCGCTGCCTCCTTCGCCGGCGACGTTCTCGACGTCCGAGATCATTCGTTTCCGACGATCGGATGATAGAGATACGGATTGTCTTCGAAGAGCAGAGGAGAATCGCTGAGAGTGCTGCGAATTCAAGCAGCGGAAGGTGGGAGGTGGATGTCGATCAGCGAGCGGAGATTTTCATTGATGATTTCCGCCGTCAATTGAGGTTAGAGAGACAGATTTCTTTGCATTATAGAGTTGAAACAGAGTATGAAGAGAGATGGCCGCCACCGCCGCCGATTTCGCCGCCGATTTGA

Protein sequence

MASCLKKTLTKLAAFVRRCLLRRRRSRRPRSFVSDDRMIEIRIVFEEQRRIAESAANSSSGRWEVDVDQRAEIFIDDFRRQLRLERQISLHYRVETEYEERWPPPPPISPPI
Homology
BLAST of CaUC10G180380 vs. NCBI nr
Match: KAA0052985.1 (hypothetical protein E6C27_scaffold344G00960 [Cucumis melo var. makuwa] >TYK11441.1 hypothetical protein E5676_scaffold139G00970 [Cucumis melo var. makuwa])

HSP 1 Score: 109.0 bits (271), Expect = 2.7e-20
Identity = 72/118 (61.02%), Postives = 84/118 (71.19%), Query Frame = 0

Query: 1   MASCLKKTLTKLAAFVRRCLLRRRRSRRPRSFVSDDRMIEIRIVFEEQRRIAES------ 60
           MAS LKK L KL A VR CL+ RRRS+R  SF SDDR + IRIV E+Q RIAE+      
Sbjct: 8   MASRLKKALIKLTAVVRLCLVPRRRSQRLGSFDSDDRKVGIRIVLEDQSRIAENSFARKL 67

Query: 61  --AANSSSGRWEVDVDQRAEIFIDDFRRQLRLERQISL---HYRV---ETEYEERWPP 105
             A++S  G +E DVDQRAEIFI++FRRQLRLERQISL   +YRV   ETEYE+  PP
Sbjct: 68  ERASSSRYGGYEEDVDQRAEIFIENFRRQLRLERQISLQLRYYRVNSYETEYEQISPP 125

BLAST of CaUC10G180380 vs. NCBI nr
Match: XP_011652707.1 (uncharacterized protein LOC105435054 [Cucumis sativus])

HSP 1 Score: 102.8 bits (255), Expect = 1.9e-18
Identity = 71/118 (60.17%), Postives = 84/118 (71.19%), Query Frame = 0

Query: 1   MASCLKKTLTKLAAFVRRCLLRRRRSRRPRSFVS-DDRMIEIRIVFEEQRRIAES----- 60
           MAS L+K L KL A +R CLL R+RSRR  SF S DD+ + IRIV E+Q RIAES     
Sbjct: 1   MASRLQKALMKLKAVLRLCLLPRQRSRRLGSFDSDDDQKVGIRIVLEDQSRIAESSFVRK 60

Query: 61  ---AANSSSGRWEVDVDQRAEIFIDDFRRQLRLERQISL---HYRV---ETEYEERWP 104
              A++S  G +E DVDQRAEIFI++FRRQLRLERQISL   +YRV   ETEYE+R P
Sbjct: 61  LERASSSRYGGYEEDVDQRAEIFIENFRRQLRLERQISLQLRYYRVNSYETEYEQRSP 118

BLAST of CaUC10G180380 vs. NCBI nr
Match: KAE8650012.1 (hypothetical protein Csa_009473 [Cucumis sativus])

HSP 1 Score: 92.8 bits (229), Expect = 2.0e-15
Identity = 61/99 (61.62%), Postives = 72/99 (72.73%), Query Frame = 0

Query: 1   MASCLKKTLTKLAAFVRRCLLRRRRSRRPRSFVS-DDRMIEIRIVFEEQRRIAES----- 60
           MAS L+K L KL A +R CLL R+RSRR  SF S DD+ + IRIV E+Q RIAES     
Sbjct: 8   MASRLQKALMKLKAVLRLCLLPRQRSRRLGSFDSDDDQKVGIRIVLEDQSRIAESSFVRK 67

Query: 61  ---AANSSSGRWEVDVDQRAEIFIDDFRRQLRLERQISL 91
              A++S  G +E DVDQRAEIFI++FRRQLRLERQISL
Sbjct: 68  LERASSSRYGGYEEDVDQRAEIFIENFRRQLRLERQISL 106

BLAST of CaUC10G180380 vs. NCBI nr
Match: KAG6596691.1 (hypothetical protein SDJN03_09871, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028225.1 hypothetical protein SDJN02_09405, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 87.4 bits (215), Expect = 8.4e-14
Identity = 59/117 (50.43%), Postives = 74/117 (63.25%), Query Frame = 0

Query: 5   LKKTLTKLAAFVRRCLLRRRRSRRPRSFVSDDRMIEIRIVFEEQR-------RIAESAAN 64
           LKK+  KL AF+R C+ RR+ SRR RSF SDDR   +R   E++R       R  E A++
Sbjct: 12  LKKSAIKLTAFLRLCVARRQNSRRLRSFGSDDRTAGLRSFLEDERIVENRSVRKLERASS 71

Query: 65  SSSGRWEVDVDQRAEIFIDDFRRQLRLERQISLHYRV------ETEYEERWPPPPPI 109
           +S   +E DVD+R++IFID F RQLRLERQISL  R       ETE EE+ PP P I
Sbjct: 72  ASYVNFEDDVDKRSQIFIDKFLRQLRLERQISLQLRYCRVNSSETESEEKSPPYPSI 128

BLAST of CaUC10G180380 vs. NCBI nr
Match: KAG7015798.1 (hypothetical protein SDJN02_23436, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 81.3 bits (199), Expect = 6.0e-12
Identity = 56/113 (49.56%), Postives = 67/113 (59.29%), Query Frame = 0

Query: 5   LKKTLTKLAAFVRRCLLRRRRSRRPRSFVSDDRMIEIRIVFEEQR-------RIAESAAN 64
           +KK LTKL AFVR C + R  SRR RSF SD R   +R +  ++        R  E   +
Sbjct: 12  MKKALTKLTAFVRLCHVFRPPSRRMRSFDSDGRTAGLRSILGDESIVEKCSVRKLERGES 71

Query: 65  SSSGRWEVDVDQRAEIFIDDFRRQLRLERQISLHYRV------ETEYEERWPP 105
           S +G  E DVDQRA+IFID+FRRQL LERQISL  R       E +YE R PP
Sbjct: 72  SRNGSCEDDVDQRAQIFIDNFRRQLMLERQISLKLRYYGINSSEIDYEARSPP 124

BLAST of CaUC10G180380 vs. ExPASy TrEMBL
Match: A0A5D3CHZ5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00970 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.3e-20
Identity = 72/118 (61.02%), Postives = 84/118 (71.19%), Query Frame = 0

Query: 1   MASCLKKTLTKLAAFVRRCLLRRRRSRRPRSFVSDDRMIEIRIVFEEQRRIAES------ 60
           MAS LKK L KL A VR CL+ RRRS+R  SF SDDR + IRIV E+Q RIAE+      
Sbjct: 8   MASRLKKALIKLTAVVRLCLVPRRRSQRLGSFDSDDRKVGIRIVLEDQSRIAENSFARKL 67

Query: 61  --AANSSSGRWEVDVDQRAEIFIDDFRRQLRLERQISL---HYRV---ETEYEERWPP 105
             A++S  G +E DVDQRAEIFI++FRRQLRLERQISL   +YRV   ETEYE+  PP
Sbjct: 68  ERASSSRYGGYEEDVDQRAEIFIENFRRQLRLERQISLQLRYYRVNSYETEYEQISPP 125

BLAST of CaUC10G180380 vs. ExPASy TrEMBL
Match: A0A0A0L4Z8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G004530 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 9.3e-19
Identity = 71/118 (60.17%), Postives = 84/118 (71.19%), Query Frame = 0

Query: 1   MASCLKKTLTKLAAFVRRCLLRRRRSRRPRSFVS-DDRMIEIRIVFEEQRRIAES----- 60
           MAS L+K L KL A +R CLL R+RSRR  SF S DD+ + IRIV E+Q RIAES     
Sbjct: 8   MASRLQKALMKLKAVLRLCLLPRQRSRRLGSFDSDDDQKVGIRIVLEDQSRIAESSFVRK 67

Query: 61  ---AANSSSGRWEVDVDQRAEIFIDDFRRQLRLERQISL---HYRV---ETEYEERWP 104
              A++S  G +E DVDQRAEIFI++FRRQLRLERQISL   +YRV   ETEYE+R P
Sbjct: 68  LERASSSRYGGYEEDVDQRAEIFIENFRRQLRLERQISLQLRYYRVNSYETEYEQRSP 125

BLAST of CaUC10G180380 vs. ExPASy TrEMBL
Match: A0A0A0L6A3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G004520 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 8.5e-12
Identity = 60/121 (49.59%), Postives = 72/121 (59.50%), Query Frame = 0

Query: 1   MASCLKKTLTKLAAFVRRCLLRRRRS-RRPRSFVSDDRMIEIRIVFEEQRRIAESAANSS 60
           MA  L++TL KL AF+R CLL RRRS  R R+ + DD+                S+   S
Sbjct: 1   MALRLEETLNKLKAFLRLCLLLRRRSIYRTRNVLEDDQT-------ARNLERDSSSRYES 60

Query: 61  SGRWEVDVDQRAEIFIDDFRRQLRLERQISLHYRV--------ETEYEERWPPPPPISPP 113
              +E DVD RAEIFI++FRRQLRLERQISL  R+        ET+YEE  PPPPP  PP
Sbjct: 61  CEEFEDDVDHRAEIFIENFRRQLRLERQISLQLRLYGVNNNSFETDYEEILPPPPP-PPP 113

BLAST of CaUC10G180380 vs. ExPASy TrEMBL
Match: A0A6J1CW64 (uncharacterized protein LOC111014780 OS=Momordica charantia OX=3673 GN=LOC111014780 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.9e-11
Identity = 57/122 (46.72%), Postives = 73/122 (59.84%), Query Frame = 0

Query: 5   LKKTLTKLAAFVR----RCLLRRRRSRRPRSFVSDDRMIEIRIVFEEQR-------RIAE 64
           LKK + K+ A +R     CL RRR S R RSF   DR + +R   E++        R  E
Sbjct: 12  LKKAVRKITALLRLNLSLCLARRRPSGRLRSFSFSDRTVGLRSFLEDEEIGENCSMRRLE 71

Query: 65  SAANSSSGRWEVDVDQRAEIFIDDFRRQLRLERQISL---HYRVE---TEYEERWPPPPP 110
            A++   G  E DVD+R++IFID+F R+LRLERQISL   +YR+    TE EER PPPPP
Sbjct: 72  RASSLRYGNAEDDVDKRSQIFIDNFLRRLRLERQISLQLRYYRINSSGTEDEERSPPPPP 131

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0052985.12.7e-2061.02hypothetical protein E6C27_scaffold344G00960 [Cucumis melo var. makuwa] >TYK1144... [more]
XP_011652707.11.9e-1860.17uncharacterized protein LOC105435054 [Cucumis sativus][more]
KAE8650012.12.0e-1561.62hypothetical protein Csa_009473 [Cucumis sativus][more]
KAG6596691.18.4e-1450.43hypothetical protein SDJN03_09871, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7015798.16.0e-1249.56hypothetical protein SDJN02_23436, partial [Cucurbita argyrosperma subsp. argyro... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3CHZ51.3e-2061.02Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0L4Z89.3e-1960.17Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G004530 PE=4 SV=1[more]
A0A0A0L6A38.5e-1249.59Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G004520 PE=4 SV=1[more]
A0A6J1CW641.9e-1146.72uncharacterized protein LOC111014780 OS=Momordica charantia OX=3673 GN=LOC111014... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008480Protein of unknown function DUF761, plantPFAMPF05553DUF761coord: 66..90
e-value: 8.0E-8
score: 31.7

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC10G180380.1CaUC10G180380.1mRNA