CaUC10G180380 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCTTGCTTGAAGAAGACGCTAACCAAACTCGCTGCATTTGTCCGCCGCTGCCTCCTTCGCCGGCGACGTTCTCGACGTCCGAGATCATTCGTTTCCGACGATCGGATGATAGAGATACGGATTGTCTTCGAAGAGCAGAGGAGAATCGCTGAGAGTGCTGCGAATTCAAGCAGCGGAAGGTGGGAGGTGGATGTCGATCAGCGAGCGGAGATTTTCATTGATGATTTCCGCCGTCAATTGAGGTTAGAGAGACAGATTTCTTTGCATTATAGAGTTGAAACAGAGTATGAAGAGAGATGGCCGCCACCGCCGCCGATTTCGCCGCCGATTTGA ATGGCTTCTTGCTTGAAGAAGACGCTAACCAAACTCGCTGCATTTGTCCGCCGCTGCCTCCTTCGCCGGCGACGTTCTCGACGTCCGAGATCATTCGTTTCCGACGATCGGATGATAGAGATACGGATTGTCTTCGAAGAGCAGAGGAGAATCGCTGAGAGTGCTGCGAATTCAAGCAGCGGAAGGTGGGAGGTGGATGTCGATCAGCGAGCGGAGATTTTCATTGATGATTTCCGCCGTCAATTGAGGTTAGAGAGACAGATTTCTTTGCATTATAGAGTTGAAACAGAGTATGAAGAGAGATGGCCGCCACCGCCGCCGATTTCGCCGCCGATTTGA ATGGCTTCTTGCTTGAAGAAGACGCTAACCAAACTCGCTGCATTTGTCCGCCGCTGCCTCCTTCGCCGGCGACGTTCTCGACGTCCGAGATCATTCGTTTCCGACGATCGGATGATAGAGATACGGATTGTCTTCGAAGAGCAGAGGAGAATCGCTGAGAGTGCTGCGAATTCAAGCAGCGGAAGGTGGGAGGTGGATGTCGATCAGCGAGCGGAGATTTTCATTGATGATTTCCGCCGTCAATTGAGGTTAGAGAGACAGATTTCTTTGCATTATAGAGTTGAAACAGAGTATGAAGAGAGATGGCCGCCACCGCCGCCGATTTCGCCGCCGATTTGA MASCLKKTLTKLAAFVRRCLLRRRRSRRPRSFVSDDRMIEIRIVFEEQRRIAESAANSSSGRWEVDVDQRAEIFIDDFRRQLRLERQISLHYRVETEYEERWPPPPPISPPI Homology
BLAST of CaUC10G180380 vs. NCBI nr
Match: KAA0052985.1 (hypothetical protein E6C27_scaffold344G00960 [Cucumis melo var. makuwa] >TYK11441.1 hypothetical protein E5676_scaffold139G00970 [Cucumis melo var. makuwa]) HSP 1 Score: 109.0 bits (271), Expect = 2.7e-20 Identity = 72/118 (61.02%), Postives = 84/118 (71.19%), Query Frame = 0
BLAST of CaUC10G180380 vs. NCBI nr
Match: XP_011652707.1 (uncharacterized protein LOC105435054 [Cucumis sativus]) HSP 1 Score: 102.8 bits (255), Expect = 1.9e-18 Identity = 71/118 (60.17%), Postives = 84/118 (71.19%), Query Frame = 0
BLAST of CaUC10G180380 vs. NCBI nr
Match: KAE8650012.1 (hypothetical protein Csa_009473 [Cucumis sativus]) HSP 1 Score: 92.8 bits (229), Expect = 2.0e-15 Identity = 61/99 (61.62%), Postives = 72/99 (72.73%), Query Frame = 0
BLAST of CaUC10G180380 vs. NCBI nr
Match: KAG6596691.1 (hypothetical protein SDJN03_09871, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028225.1 hypothetical protein SDJN02_09405, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 87.4 bits (215), Expect = 8.4e-14 Identity = 59/117 (50.43%), Postives = 74/117 (63.25%), Query Frame = 0
BLAST of CaUC10G180380 vs. NCBI nr
Match: KAG7015798.1 (hypothetical protein SDJN02_23436, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 81.3 bits (199), Expect = 6.0e-12 Identity = 56/113 (49.56%), Postives = 67/113 (59.29%), Query Frame = 0
BLAST of CaUC10G180380 vs. ExPASy TrEMBL
Match: A0A5D3CHZ5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00970 PE=4 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 1.3e-20 Identity = 72/118 (61.02%), Postives = 84/118 (71.19%), Query Frame = 0
BLAST of CaUC10G180380 vs. ExPASy TrEMBL
Match: A0A0A0L4Z8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G004530 PE=4 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 9.3e-19 Identity = 71/118 (60.17%), Postives = 84/118 (71.19%), Query Frame = 0
BLAST of CaUC10G180380 vs. ExPASy TrEMBL
Match: A0A0A0L6A3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G004520 PE=4 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 8.5e-12 Identity = 60/121 (49.59%), Postives = 72/121 (59.50%), Query Frame = 0
BLAST of CaUC10G180380 vs. ExPASy TrEMBL
Match: A0A6J1CW64 (uncharacterized protein LOC111014780 OS=Momordica charantia OX=3673 GN=LOC111014780 PE=4 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 1.9e-11 Identity = 57/122 (46.72%), Postives = 73/122 (59.84%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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