CaUC10G179550 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATCCTCATCCTATTACGTATGAGAGGATTAGGCGGCGGCGGCGGCGGGGCTCCTGCAGAGGCTTCCGCCTGAGCTCCAGAAGACTGTCCGTGTGGAAGCTGCGGGCGAAGTTGGAGTGGGTGTTGCGGCGGATCTTAAACTCGTGGCGGCGTTCCATTGTTGAGATTAAGAAGGGCGGGAGATCAAAGGGTTGTTCTTCTTCGGCGGCGGCGCAACCGAGATGCGAGTGCAGGCTCAGCTCCTTCCGCCGCTCCAACTCCTTCTACGCCGAAGCCATTGCCGATTGCTTGGATTTCATCAAGACCTCCTCCTCCTCCTCCTCCACTTCCACTTCCACTTCCCTCTGA ATGGATCCTCATCCTATTACGTATGAGAGGATTAGGCGGCGGCGGCGGCGGGGCTCCTGCAGAGGCTTCCGCCTGAGCTCCAGAAGACTGTCCGTGTGGAAGCTGCGGGCGAAGTTGGAGTGGGTGTTGCGGCGGATCTTAAACTCGTGGCGGCGTTCCATTGTTGAGATTAAGAAGGGCGGGAGATCAAAGGGTTGTTCTTCTTCGGCGGCGGCGCAACCGAGATGCGAGTGCAGGCTCAGCTCCTTCCGCCGCTCCAACTCCTTCTACGCCGAAGCCATTGCCGATTGCTTGGATTTCATCAAGACCTCCTCCTCCTCCTCCTCCACTTCCACTTCCACTTCCCTCTGA ATGGATCCTCATCCTATTACGTATGAGAGGATTAGGCGGCGGCGGCGGCGGGGCTCCTGCAGAGGCTTCCGCCTGAGCTCCAGAAGACTGTCCGTGTGGAAGCTGCGGGCGAAGTTGGAGTGGGTGTTGCGGCGGATCTTAAACTCGTGGCGGCGTTCCATTGTTGAGATTAAGAAGGGCGGGAGATCAAAGGGTTGTTCTTCTTCGGCGGCGGCGCAACCGAGATGCGAGTGCAGGCTCAGCTCCTTCCGCCGCTCCAACTCCTTCTACGCCGAAGCCATTGCCGATTGCTTGGATTTCATCAAGACCTCCTCCTCCTCCTCCTCCACTTCCACTTCCACTTCCCTCTGA MDPHPITYERIRRRRRRGSCRGFRLSSRRLSVWKLRAKLEWVLRRILNSWRRSIVEIKKGGRSKGCSSSAAAQPRCECRLSSFRRSNSFYAEAIADCLDFIKTSSSSSSTSTSTSL Homology
BLAST of CaUC10G179550 vs. NCBI nr
Match: KAA0052904.1 (hypothetical protein E6C27_scaffold344G00100 [Cucumis melo var. makuwa] >TYK11358.1 hypothetical protein E5676_scaffold139G00100 [Cucumis melo var. makuwa]) HSP 1 Score: 129.0 bits (323), Expect = 2.6e-26 Identity = 82/110 (74.55%), Postives = 89/110 (80.91%), Query Frame = 0
BLAST of CaUC10G179550 vs. NCBI nr
Match: KAE8637405.1 (hypothetical protein CSA_023382 [Cucumis sativus] >KGN55589.1 hypothetical protein Csa_011775 [Cucumis sativus]) HSP 1 Score: 125.9 bits (315), Expect = 2.2e-25 Identity = 77/105 (73.33%), Postives = 86/105 (81.90%), Query Frame = 0
BLAST of CaUC10G179550 vs. NCBI nr
Match: KAG6596289.1 (hypothetical protein SDJN03_09469, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 117.1 bits (292), Expect = 1.0e-22 Identity = 74/120 (61.67%), Postives = 86/120 (71.67%), Query Frame = 0
BLAST of CaUC10G179550 vs. NCBI nr
Match: KAG7027838.1 (hypothetical protein SDJN02_09015, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 117.1 bits (292), Expect = 1.0e-22 Identity = 74/120 (61.67%), Postives = 86/120 (71.67%), Query Frame = 0
BLAST of CaUC10G179550 vs. NCBI nr
Match: XP_022158286.1 (uncharacterized protein LOC111024807 [Momordica charantia]) HSP 1 Score: 97.8 bits (242), Expect = 6.4e-17 Identity = 68/107 (63.55%), Postives = 76/107 (71.03%), Query Frame = 0
BLAST of CaUC10G179550 vs. ExPASy TrEMBL
Match: A0A5A7UC85 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00100 PE=4 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 1.3e-26 Identity = 82/110 (74.55%), Postives = 89/110 (80.91%), Query Frame = 0
BLAST of CaUC10G179550 vs. ExPASy TrEMBL
Match: A0A0A0L3I7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G000130 PE=4 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 1.1e-25 Identity = 77/105 (73.33%), Postives = 86/105 (81.90%), Query Frame = 0
BLAST of CaUC10G179550 vs. ExPASy TrEMBL
Match: A0A6J1E0I4 (uncharacterized protein LOC111024807 OS=Momordica charantia OX=3673 GN=LOC111024807 PE=4 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 3.1e-17 Identity = 68/107 (63.55%), Postives = 76/107 (71.03%), Query Frame = 0
BLAST of CaUC10G179550 vs. ExPASy TrEMBL
Match: A0A165XTS4 (Uncharacterized protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_014121 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 1.3e-10 Identity = 53/115 (46.09%), Postives = 70/115 (60.87%), Query Frame = 0
BLAST of CaUC10G179550 vs. ExPASy TrEMBL
Match: A0A2G3D6M2 (Uncharacterized protein OS=Capsicum chinense OX=80379 GN=BC332_04959 PE=4 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 2.0e-08 Identity = 52/123 (42.28%), Postives = 65/123 (52.85%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
|