CaUC09G178660 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC09G178660
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Pentatricopeptide repeat-containing protein
Location	Ciama_Chr09: 37979806 .. 37982778 (+)
RNA-Seq Expression	CaUC09G178660
Synteny	CaUC09G178660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACCACCTAAAGCAAGCTCATGCACAGGTTCTTACATCTGGCCTCCATAACAACAACTTCGTGTTGAGTAGACTGTTGAATTTTTGTGCGGATCCTCGCCATGGCAGTCTTTCTCATGCATTCAAGCTCTTCCAACACATTCAACACCCCACTATTTGCATCTACAATACCATGATCAAAGCCCTTCTTCTTCGAGGTGAATTTCTCCACGCCATTCTTGTATTCTCTGCGATGTTAAGAAATGGGATCCACCCTGATACTTATACTCTTCCTTACGTTCTAAAAGCTTCTGCGAGGATGAAAAATTTTCATCTCGGAGAATCCGTTCATGCTTGTGTTGTAAAATTGGGTTTTGTACTGGATGCATTTGTGGGCAATTCTTTGCTTGTTATGTACTGCGCGTTCGGTAACATGAGAGTTGCAGGACAAGTGTTCGATGAAATGCCTGAGTTGAGTACTGTGTCATGGACGGTTATGATTTATGGGTTTGCAAAAATGGGTGATGTTGACACGGCAAGAAGGTTGTTTGACATGGCTACGGTTAAAGATAGAGGAATATGGGGCGCTATGATATCTGGGTATGTGCAGAACAATTGCTTTAAGGAGGGGCTTCACATGTTTCGTTTGATGCAGCTGACTGAATTAGAGCCTGATGAAGCCATAATCGTTACAATCCTTTGTGCTTGTGCTCATATGGGAGCTCTTGATACTGGGATTTGGATTCATAGGTATTTGGGTCAGCTGGGATTGCCATTAACTCTCAGAGTGAACACTGGGCTGATAGATATGTATGCAAAATGTGGGCATTTGGATCTTGCGAAGCACCTGTTCGATGAAACGTCGCAGAGAGATAGTGTTTGTTGGAACGTAATGATTTCAGGAATGGCAATGAATGGAGATGGAGAAGGTGCACTCAAGCTCTTCATGGAGATGGAAAAAGCTAGAATGAAGCCGGATGACATTACTTTCATAGCTGTTTTGGCTGCTTGTAGCAACTCAGGTATGGTTGATGAAGGTCTAAGGATATGGAATAGTATGTCTACAATACACAAAATTGAGCCAAAGAGTGAACATTATGGGTGCGTAATCGACCTGCTGAGTCGAGTTGGGCGGTTCCAGGAAGCAGAGGGAGTGATCCAAAGGCTTCCAAAATCAGCCAGCCCTTCAGAGGAAGCAGTGGCTTGGAGGGCATTTTTAAGCGCTTGCTGCAAGCATGGGCAAATGCAGCAGGCTGAGGTTGCTGCTGAAAGGCTGTTCCAATTGGAAAGGCATAGTGGGGCTTATGTTTTGCTCTCAAATATGTATGCTTCTTTGGGGAAACATGGGGATGCTAAAAAAGTGAGGAAGATGATGAAGTTGAAAGGGGTTGAGAAGGTACCAGGTTGTAGCTCCATCAAAGTGAATGGGGTTGTCAATGAATTCATTGCAGGGGAAAAAACACACCTCCAAATTGGTAATATACATGTGGTTTTGGAAGAGTTGAATAATCAAATTGTTCAAGCTGATCTTGAAAGTATAGTATCAACAACTGACATTGGATATTGATACATGCAAGCGCACATGTCAAATTATAATACACTAAAATAGTTCGAGATTGATTATTGTCTTTTGGAGATCAAGTAATTAATTATTTTAACCATTGCAGAACTCGTTTCAATTTTTTTAGGGAACCGATTCTTCATACAAACTTAAACTAAATTAATTGCCTTAACCCTTAAATCCATTTAATGCCAACCGTAGATGAAATCTAGATAGAGACACATCCTAGGGTACTAACTGAATCTCCTATAAAGATATAATGGAGTAGTTTAAAGTCCTAACTTGGTAGTATAAATGCTCCTGAGGTTGGGGTTACGCACACCACCAAATATTTGTATCGTTGATTCTGTGAATCAATTTATTGTCAATCATAAATCTAAAAGCCTGAGACACATATATCCTCTCTTTCACTCAACATATTTTCATATATAGTTAATAAGCAATTAATTAACTACGCATGGCACTAATACTTTTCATTATGAATCTCTATGGTTCACTTATTACTCTTGTGCATATTTGAACAGCTAGCAAATTAGATCTAACTTAACATTCTTTCTCTCGGACAAGAAACTAGGCAAAAACAAATTAAATAATGGTTGAACGTTCAATCGTATTAAGGACAACCATACCATAATGAAAAATGCACAAATCAATCTAAAGAAGAATCAAAACAATTGAATATTCGTAACTACATCAAAGCCCTAGGAATACAAAATAGTTTAATCGCATAATCACTTTGCTGATAGTGGATATTAGCAAGTGAAGAAATGAATCCAGATTAATCGAGGTAAGGAAAGAGAGAACTAGTCTTATACCTACAAAAACTCTAAAATGTAATGACGAAGTGATGGTAGGCATCCTTCATCATTGGCCTGATCCAATCCTAAAAAGTGTATTCCAAGTTTGATAGACTAAAGAAACTATTTGGGTCTAGGTCGAGTCATCCCAACTGATAGCATTTGAAATGTTATTTCACTCATCTTCATTGAAGCTCATTCTTAGGTTTAATGTGTTTAATTGATGATTTTGTAGGTTTCGACCACCTAAGAGATAGAATCAAATGTTAGGATGAAAATCGAGCTATAATGGACCATTTGGAGCCCTGACAAAGTAAGCAAATCAAATAGGAGGTGACATGATGATTTTACTCCTGTGGCCTAGCGTTGCGGCGTTGTGCAACACTATGCTCAGTGCCAAATTCCAGTAGCAGTGAAATTGTATACCGTCATGATGCTACCTAGATGGAGGAACAATGTAGCGCCTCAACACTATGACACACGAGGAAAAAGGGCCTTAGTGCTGCGACGTTGTCCTATGGCATCGCGGCCCTATCGATTGGTTATAAGTGGAAATATTTTCCCTCATTTAGATTACCTAGCCACTAAGACTCTGATCCCTCTCGCTCCTCTCTTTGTTCTTTACTGTTTTTAG

mRNA sequence

ATGAACCACCTAAAGCAAGCTCATGCACAGGTTCTTACATCTGGCCTCCATAACAACAACTTCGTGTTGAGTAGACTGTTGAATTTTTGTGCGGATCCTCGCCATGGCAGTCTTTCTCATGCATTCAAGCTCTTCCAACACATTCAACACCCCACTATTTGCATCTACAATACCATGATCAAAGCCCTTCTTCTTCGAGGTGAATTTCTCCACGCCATTCTTGTATTCTCTGCGATGTTAAGAAATGGGATCCACCCTGATACTTATACTCTTCCTTACGTTCTAAAAGCTTCTGCGAGGATGAAAAATTTTCATCTCGGAGAATCCGTTCATGCTTGTGTTGTAAAATTGGGTTTTGTACTGGATGCATTTGTGGGCAATTCTTTGCTTGTTATGTACTGCGCGTTCGGTAACATGAGAGTTGCAGGACAAGTGTTCGATGAAATGCCTGAGTTGAGTACTGTGTCATGGACGGTTATGATTTATGGGTTTGCAAAAATGGGTGATGTTGACACGGCAAGAAGGTTGTTTGACATGGCTACGGTTAAAGATAGAGGAATATGGGGCGCTATGATATCTGGGTATGTGCAGAACAATTGCTTTAAGGAGGGGCTTCACATGTTTCGTTTGATGCAGCTGACTGAATTAGAGCCTGATGAAGCCATAATCGTTACAATCCTTTGTGCTTGTGCTCATATGGGAGCTCTTGATACTGGGATTTGGATTCATAGGTATTTGGGTCAGCTGGGATTGCCATTAACTCTCAGAGTGAACACTGGGCTGATAGATATGTATGCAAAATGTGGGCATTTGGATCTTGCGAAGCACCTGTTCGATGAAACGTCGCAGAGAGATAGTGTTTGTTGGAACGTAATGATTTCAGGAATGGCAATGAATGGAGATGGAGAAGGTGCACTCAAGCTCTTCATGGAGATGGAAAAAGCTAGAATGAAGCCGGATGACATTACTTTCATAGCTGTTTTGGCTGCTTGTAGCAACTCAGGTATGGTTGATGAAGGTCTAAGGATATGGAATAGTATGTCTACAATACACAAAATTGAGCCAAAGAGTGAACATTATGGGTGCGTAATCGACCTGCTGAGTCGAGTTGGGCGGTTCCAGGAAGCAGAGGGAGTGATCCAAAGGCTTCCAAAATCAGCCAGCCCTTCAGAGGAAGCAGTGGCTTGGAGGGCATTTTTAAGCGCTTGCTGCAAGCATGGGCAAATGCAGCAGGCTGAGGTTGCTGCTGAAAGGCTGTTCCAATTGGAAAGGCATAGTGGGGCTTATGTTTTGCTCTCAAATATGTATGCTTCTTTGGGGAAACATGGGGATGCTAAAAAAGTGAGGAAGATGATGAAGTTGAAAGGGGTTGAGAAGCGTTGCGGCGTTGTGCAACACTATGCTCAGTGCCAAATTCCAGTAGCAGTGAAATTGTATACCGTCATGATGCTACCTAGATGGAGGAACAATGTAGCGCCTCAACACTATGACACACGAGGAAAAAGGGCCTTAGTGCTGCGACGTTGTCCTATGGCATCGCGGCCCTATCGATTGGTTATAAGTGGAAATATTTTCCCTCATTTAGATTACCTAGCCACTAAGACTCTGATCCCTCTCGCTCCTCTCTTTGTTCTTTACTGTTTTTAG

Coding sequence (CDS)

ATGAACCACCTAAAGCAAGCTCATGCACAGGTTCTTACATCTGGCCTCCATAACAACAACTTCGTGTTGAGTAGACTGTTGAATTTTTGTGCGGATCCTCGCCATGGCAGTCTTTCTCATGCATTCAAGCTCTTCCAACACATTCAACACCCCACTATTTGCATCTACAATACCATGATCAAAGCCCTTCTTCTTCGAGGTGAATTTCTCCACGCCATTCTTGTATTCTCTGCGATGTTAAGAAATGGGATCCACCCTGATACTTATACTCTTCCTTACGTTCTAAAAGCTTCTGCGAGGATGAAAAATTTTCATCTCGGAGAATCCGTTCATGCTTGTGTTGTAAAATTGGGTTTTGTACTGGATGCATTTGTGGGCAATTCTTTGCTTGTTATGTACTGCGCGTTCGGTAACATGAGAGTTGCAGGACAAGTGTTCGATGAAATGCCTGAGTTGAGTACTGTGTCATGGACGGTTATGATTTATGGGTTTGCAAAAATGGGTGATGTTGACACGGCAAGAAGGTTGTTTGACATGGCTACGGTTAAAGATAGAGGAATATGGGGCGCTATGATATCTGGGTATGTGCAGAACAATTGCTTTAAGGAGGGGCTTCACATGTTTCGTTTGATGCAGCTGACTGAATTAGAGCCTGATGAAGCCATAATCGTTACAATCCTTTGTGCTTGTGCTCATATGGGAGCTCTTGATACTGGGATTTGGATTCATAGGTATTTGGGTCAGCTGGGATTGCCATTAACTCTCAGAGTGAACACTGGGCTGATAGATATGTATGCAAAATGTGGGCATTTGGATCTTGCGAAGCACCTGTTCGATGAAACGTCGCAGAGAGATAGTGTTTGTTGGAACGTAATGATTTCAGGAATGGCAATGAATGGAGATGGAGAAGGTGCACTCAAGCTCTTCATGGAGATGGAAAAAGCTAGAATGAAGCCGGATGACATTACTTTCATAGCTGTTTTGGCTGCTTGTAGCAACTCAGGTATGGTTGATGAAGGTCTAAGGATATGGAATAGTATGTCTACAATACACAAAATTGAGCCAAAGAGTGAACATTATGGGTGCGTAATCGACCTGCTGAGTCGAGTTGGGCGGTTCCAGGAAGCAGAGGGAGTGATCCAAAGGCTTCCAAAATCAGCCAGCCCTTCAGAGGAAGCAGTGGCTTGGAGGGCATTTTTAAGCGCTTGCTGCAAGCATGGGCAAATGCAGCAGGCTGAGGTTGCTGCTGAAAGGCTGTTCCAATTGGAAAGGCATAGTGGGGCTTATGTTTTGCTCTCAAATATGTATGCTTCTTTGGGGAAACATGGGGATGCTAAAAAAGTGAGGAAGATGATGAAGTTGAAAGGGGTTGAGAAGCGTTGCGGCGTTGTGCAACACTATGCTCAGTGCCAAATTCCAGTAGCAGTGAAATTGTATACCGTCATGATGCTACCTAGATGGAGGAACAATGTAGCGCCTCAACACTATGACACACGAGGAAAAAGGGCCTTAGTGCTGCGACGTTGTCCTATGGCATCGCGGCCCTATCGATTGGTTATAAGTGGAAATATTTTCCCTCATTTAGATTACCTAGCCACTAAGACTCTGATCCCTCTCGCTCCTCTCTTTGTTCTTTACTGTTTTTAG

Protein sequence

MNHLKQAHAQVLTSGLHNNNFVLSRLLNFCADPRHGSLSHAFKLFQHIQHPTICIYNTMIKALLLRGEFLHAILVFSAMLRNGIHPDTYTLPYVLKASARMKNFHLGESVHACVVKLGFVLDAFVGNSLLVMYCAFGNMRVAGQVFDEMPELSTVSWTVMIYGFAKMGDVDTARRLFDMATVKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTELEPDEAIIVTILCACAHMGALDTGIWIHRYLGQLGLPLTLRVNTGLIDMYAKCGHLDLAKHLFDETSQRDSVCWNVMISGMAMNGDGEGALKLFMEMEKARMKPDDITFIAVLAACSNSGMVDEGLRIWNSMSTIHKIEPKSEHYGCVIDLLSRVGRFQEAEGVIQRLPKSASPSEEAVAWRAFLSACCKHGQMQQAEVAAERLFQLERHSGAYVLLSNMYASLGKHGDAKKVRKMMKLKGVEKRCGVVQHYAQCQIPVAVKLYTVMMLPRWRNNVAPQHYDTRGKRALVLRRCPMASRPYRLVISGNIFPHLDYLATKTLIPLAPLFVLYCF

Homology

[Close]

BLAST of CaUC09G178660 vs. NCBI nr
Match: XP_038890502.1 (pentatricopeptide repeat-containing protein At2g20540-like [Benincasa hispida])

HSP 1 Score: 859.4 bits (2219), Expect = 1.7e-245
Identity = 418/459 (91.07%), Postives = 441/459 (96.08%), Query Frame = 0


Query: 1   MNHLKQAHAQVLTSGLHNNNFVLSRLLNFCADPRHGSLSHAFKLFQHIQHPTICIYNTMI 60
           M  LKQAHAQVLTSGLHN+NFVLSRLLNFCADP +GSLSHAFKLFQHIQHP+ICI N MI
Sbjct: 18  MKQLKQAHAQVLTSGLHNSNFVLSRLLNFCADPHNGSLSHAFKLFQHIQHPSICICNIMI 77

Query: 61  KALLLRGEFLHAILVFSAMLRNGIHPDTYTLPYVLKASARMKNFHLGESVHACVVKLGFV 120
           KALLLRGEFL A++VFSAMLRNGIHPD YTLPYVLKASARM NFHLGESVHAC +KLGFV
Sbjct: 78  KALLLRGEFLDAVVVFSAMLRNGIHPDAYTLPYVLKASARMTNFHLGESVHACSIKLGFV 137

Query: 121 LDAFVGNSLLVMYCAFGNMRVAGQVFDEMPELSTVSWTVMIYGFAKMGDVDTARRLFDMA 180
           LD FVGNSLLVMYCAFGNMR AGQVFDEMPE+S+VSWTVMIYG+AKMGDVDTAR LFDMA
Sbjct: 138 LDEFVGNSLLVMYCAFGNMRNAGQVFDEMPEMSSVSWTVMIYGYAKMGDVDTARGLFDMA 197

Query: 181 TVKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTELEPDEAIIVTILCACAHMGALDTGI 240
           T KDRGIWGAMISGYVQNNCFKEGLHMFRLMQ TE+EPDEAIIVTIL ACAHMGALDTGI
Sbjct: 198 TDKDRGIWGAMISGYVQNNCFKEGLHMFRLMQQTEIEPDEAIIVTILSACAHMGALDTGI 257

Query: 241 WIHRYLGQLGLPLTLRVNTGLIDMYAKCGHLDLAKHLFDETSQRDSVCWNVMISGMAMNG 300
           WIHRYLGQLGLPLTLRV+TGLIDMYAKCGHL+LAK+LFDE SQRD++CWNVMISGMAM+G
Sbjct: 258 WIHRYLGQLGLPLTLRVSTGLIDMYAKCGHLNLAKYLFDEMSQRDTICWNVMISGMAMHG 317

Query: 301 DGEGALKLFMEMEKARMKPDDITFIAVLAACSNSGMVDEGLRIWNSMSTIHKIEPKSEHY 360
           DGEGALKLFMEMEKARMKPDDITFIAVLAACSNSGM+DEGLRIWN MSTIHKIEPKSEHY
Sbjct: 318 DGEGALKLFMEMEKARMKPDDITFIAVLAACSNSGMIDEGLRIWNKMSTIHKIEPKSEHY 377

Query: 361 GCVIDLLSRVGRFQEAEGVIQRLPKSASPSEEAVAWRAFLSACCKHGQMQQAEVAAERLF 420
           GCVIDLLSRVGRFQEAEGVIQRLPK+ASPSEEAVAWRAFLSACCKHG+ QQAEVAAERLF
Sbjct: 378 GCVIDLLSRVGRFQEAEGVIQRLPKTASPSEEAVAWRAFLSACCKHGRTQQAEVAAERLF 437

Query: 421 QLERHSGAYVLLSNMYASLGKHGDAKKVRKMMKLKGVEK 460
           QLERHSGAYVLLSNMYA+LGKHG+AK+VR+MMKLKGVEK
Sbjct: 438 QLERHSGAYVLLSNMYAALGKHGEAKRVREMMKLKGVEK 476

[Close]

BLAST of CaUC09G178660 vs. NCBI nr
Match: XP_004143828.1 (pentatricopeptide repeat-containing protein At2g20540 [Cucumis sativus])

HSP 1 Score: 830.1 bits (2143), Expect = 1.1e-236
Identity = 404/459 (88.02%), Postives = 432/459 (94.12%), Query Frame = 0


Query: 1   MNHLKQAHAQVLTSGLHNNNFVLSRLLNFCADPRHGSLSHAFKLFQHIQHPTICIYNTMI 60
           MN LKQAHAQVL SGLHN+NFVLSRLLNFCA+ R+GSLSHAFKLFQHIQHPTICI+NTMI
Sbjct: 18  MNQLKQAHAQVLKSGLHNSNFVLSRLLNFCAESRNGSLSHAFKLFQHIQHPTICIFNTMI 77

Query: 61  KALLLRGEFLHAILVFSAMLRNGIHPDTYTLPYVLKASARMKNFHLGESVHACVVKLGFV 120
           KALLLRGEFL+AI VFSA+ RNGIHPDTYTLPYVLKASARM N HLGES+HAC +KLG  
Sbjct: 78  KALLLRGEFLNAIAVFSAIFRNGIHPDTYTLPYVLKASARMTNIHLGESIHACTIKLGSA 137

Query: 121 LDAFVGNSLLVMYCAFGNMRVAGQVFDEMPELSTVSWTVMIYGFAKMGDVDTARRLFDMA 180
           ++ FVGNSLLVMY +F NMR A QVFDEMPELS VSWTVMIYG+A MGDVDTAR LFDMA
Sbjct: 138 VNEFVGNSLLVMYRSFDNMRSARQVFDEMPELSAVSWTVMIYGYANMGDVDTARELFDMA 197

Query: 181 TVKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTELEPDEAIIVTILCACAHMGALDTGI 240
           TVKD GIWGAMISGYVQNNCFKEGLHMFRLMQLTE+EPDEAIIVTIL ACAHMGALDTGI
Sbjct: 198 TVKDTGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILSACAHMGALDTGI 257

Query: 241 WIHRYLGQLGLPLTLRVNTGLIDMYAKCGHLDLAKHLFDETSQRDSVCWNVMISGMAMNG 300
           WIHRYLG+LGLPLTLRV+TGLIDMYAKCGHLDLAK+LF+E SQRD+VCWN MISGMAM+G
Sbjct: 258 WIHRYLGRLGLPLTLRVSTGLIDMYAKCGHLDLAKYLFNEMSQRDNVCWNAMISGMAMDG 317

Query: 301 DGEGALKLFMEMEKARMKPDDITFIAVLAACSNSGMVDEGLRIWNSMSTIHKIEPKSEHY 360
           DGEGA+KLFMEMEKA +KPD+ITFIAVLAACSNSGMVDEG+RIWN MST+HKIEPKSEHY
Sbjct: 318 DGEGAIKLFMEMEKAGIKPDNITFIAVLAACSNSGMVDEGIRIWNRMSTVHKIEPKSEHY 377

Query: 361 GCVIDLLSRVGRFQEAEGVIQRLPKSASPSEEAVAWRAFLSACCKHGQMQQAEVAAERLF 420
           GCVIDLLSRVGRF+EAEGVIQRLPK+ASPSEEAVAWRAFLSACCKHGQ QQAEVAAERLF
Sbjct: 378 GCVIDLLSRVGRFEEAEGVIQRLPKTASPSEEAVAWRAFLSACCKHGQTQQAEVAAERLF 437

Query: 421 QLERHSGAYVLLSNMYASLGKHGDAKKVRKMMKLKGVEK 460
           QLERHSGAYVLLSNMYA+LGKH DAK+VR MMKLKGVEK
Sbjct: 438 QLERHSGAYVLLSNMYAALGKHEDAKRVRNMMKLKGVEK 476

[Close]

BLAST of CaUC09G178660 vs. NCBI nr
Match: XP_016903441.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g20540-like [Cucumis melo])

HSP 1 Score: 825.9 bits (2132), Expect = 2.1e-235
Identity = 403/459 (87.80%), Postives = 429/459 (93.46%), Query Frame = 0


Query: 1   MNHLKQAHAQVLTSGLHNNNFVLSRLLNFCADPRHGSLSHAFKLFQHIQHPTICIYNTMI 60
           MNHLKQAHAQVLTSGLHN+NFVLS+LLNFCA+ R+GSLSHAFKLFQHIQHPTICI NTMI
Sbjct: 18  MNHLKQAHAQVLTSGLHNSNFVLSKLLNFCAESRNGSLSHAFKLFQHIQHPTICICNTMI 77

Query: 61  KALLLRGEFLHAILVFSAMLRNGIHPDTYTLPYVLKASARMKNFHLGESVHACVVKLGFV 120
           KALLLRGEFL+AI+VFSAM RNGIHPDTYTLPYVLKASARM N HLGES+HAC +KLGF 
Sbjct: 78  KALLLRGEFLNAIVVFSAMFRNGIHPDTYTLPYVLKASARMTNIHLGESIHACTIKLGFA 137

Query: 121 LDAFVGNSLLVMYCAFGNMRVAGQVFDEMPELSTVSWTVMIYGFAKMGDVDTARRLFDMA 180
           +D FVGNSLLVMY +F  M  A QVFDEMPELS VSWTVMIYG+A MGDVDTAR LFDMA
Sbjct: 138 VDEFVGNSLLVMYRSFDKMTSARQVFDEMPELSAVSWTVMIYGYANMGDVDTARELFDMA 197

Query: 181 TVKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTELEPDEAIIVTILCACAHMGALDTGI 240
           TVKD GIWGAMISGYVQNNCFKEGLHMFRLMQLTE+EPDEAIIVTIL ACAHMGALDTGI
Sbjct: 198 TVKDTGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILSACAHMGALDTGI 257

Query: 241 WIHRYLGQLGLPLTLRVNTGLIDMYAKCGHLDLAKHLFDETSQRDSVCWNVMISGMAMNG 300
           WIHRYLG+LGL LTLRV TGLIDMYAKCGHLDLAK+LF+E SQRD+VCWN MISGMAM+G
Sbjct: 258 WIHRYLGRLGLSLTLRVRTGLIDMYAKCGHLDLAKYLFNEMSQRDNVCWNAMISGMAMDG 317

Query: 301 DGEGALKLFMEMEKARMKPDDITFIAVLAACSNSGMVDEGLRIWNSMSTIHKIEPKSEHY 360
           DGEGA+KLFMEMEKA +KPD+ITFIAVLAACSNSGMVDEG+RIWN MSTIHKIEPKSEHY
Sbjct: 318 DGEGAIKLFMEMEKAGIKPDNITFIAVLAACSNSGMVDEGIRIWNRMSTIHKIEPKSEHY 377

Query: 361 GCVIDLLSRVGRFQEAEGVIQRLPKSASPSEEAVAWRAFLSACCKHGQMQQAEVAAERLF 420
           GCVIDLLSRVGRF+EAE VI RLPK+A+PSEEAVAWRAFLSACCKHGQ QQAEVAAERLF
Sbjct: 378 GCVIDLLSRVGRFEEAEAVILRLPKTANPSEEAVAWRAFLSACCKHGQTQQAEVAAERLF 437

Query: 421 QLERHSGAYVLLSNMYASLGKHGDAKKVRKMMKLKGVEK 460
           QLERHSGAYVLLSNMYA+LGKH DAK+VR MMKLKGVEK
Sbjct: 438 QLERHSGAYVLLSNMYAALGKHEDAKRVRNMMKLKGVEK 476

[Close]

BLAST of CaUC09G178660 vs. NCBI nr
Match: KAA0040513.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK23450.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 824.3 bits (2128), Expect = 6.1e-235
Identity = 402/459 (87.58%), Postives = 428/459 (93.25%), Query Frame = 0


Query: 1   MNHLKQAHAQVLTSGLHNNNFVLSRLLNFCADPRHGSLSHAFKLFQHIQHPTICIYNTMI 60
           MNHLKQAHAQVLTSGLHN+NFVLS+LLNFCA+ R+GSLSHAFKLFQHIQHPTICI NTMI
Sbjct: 18  MNHLKQAHAQVLTSGLHNSNFVLSKLLNFCAESRNGSLSHAFKLFQHIQHPTICICNTMI 77

Query: 61  KALLLRGEFLHAILVFSAMLRNGIHPDTYTLPYVLKASARMKNFHLGESVHACVVKLGFV 120
           KALLLRGEFL+AI+VFSAM RNGIHPDTYTLPYVLKASARM N HLGES+HAC +KLGF 
Sbjct: 78  KALLLRGEFLNAIVVFSAMFRNGIHPDTYTLPYVLKASARMTNIHLGESIHACTIKLGFA 137

Query: 121 LDAFVGNSLLVMYCAFGNMRVAGQVFDEMPELSTVSWTVMIYGFAKMGDVDTARRLFDMA 180
           +D FVGNSLLVMY +F  M  A QVFDEMPELS VSWTVMIYG+A MGDVDTAR LFDMA
Sbjct: 138 VDEFVGNSLLVMYRSFDKMTSARQVFDEMPELSAVSWTVMIYGYANMGDVDTARELFDMA 197

Query: 181 TVKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTELEPDEAIIVTILCACAHMGALDTGI 240
           TVKD GIWGAMISGYVQNNCFKEGLHMFRLMQLTE+EPDEAIIVTIL ACAHMGA DTGI
Sbjct: 198 TVKDTGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILSACAHMGAFDTGI 257

Query: 241 WIHRYLGQLGLPLTLRVNTGLIDMYAKCGHLDLAKHLFDETSQRDSVCWNVMISGMAMNG 300
           WIHRYLG+LGL LTLRV TGLIDMYAKCGHLDLAK+LF+E SQRD+VCWN MISGMAM+G
Sbjct: 258 WIHRYLGRLGLSLTLRVRTGLIDMYAKCGHLDLAKYLFNEMSQRDNVCWNAMISGMAMDG 317

Query: 301 DGEGALKLFMEMEKARMKPDDITFIAVLAACSNSGMVDEGLRIWNSMSTIHKIEPKSEHY 360
           DGEGA+KLFMEMEKA +KPD+ITFIAVLAACSNSGMVDEG+RIWN MSTIHKIEPKSEHY
Sbjct: 318 DGEGAIKLFMEMEKAGIKPDNITFIAVLAACSNSGMVDEGIRIWNRMSTIHKIEPKSEHY 377

Query: 361 GCVIDLLSRVGRFQEAEGVIQRLPKSASPSEEAVAWRAFLSACCKHGQMQQAEVAAERLF 420
           GCVIDLLSRVGRF+EAE VI RLPK+A+PSEEAVAWRAFLSACCKHGQ QQAEVAAERLF
Sbjct: 378 GCVIDLLSRVGRFEEAEAVILRLPKTANPSEEAVAWRAFLSACCKHGQTQQAEVAAERLF 437

Query: 421 QLERHSGAYVLLSNMYASLGKHGDAKKVRKMMKLKGVEK 460
           QLERHSGAYVLLSNMYA+LGKH DAK+VR MMKLKGVEK
Sbjct: 438 QLERHSGAYVLLSNMYAALGKHEDAKRVRNMMKLKGVEK 476

[Close]

BLAST of CaUC09G178660 vs. NCBI nr
Match: XP_022973287.1 (pentatricopeptide repeat-containing protein At2g20540-like [Cucurbita maxima])

HSP 1 Score: 803.5 bits (2074), Expect = 1.1e-228
Identity = 386/459 (84.10%), Postives = 425/459 (92.59%), Query Frame = 0


Query: 1   MNHLKQAHAQVLTSGLHNNNFVLSRLLNFCADPRHGSLSHAFKLFQHIQHPTICIYNTMI 60
           M  LKQAHAQVLTSGL +N+F LSR+L+FCA+PRHGSLSHA KLFQHIQHPTICI NTMI
Sbjct: 18  MKQLKQAHAQVLTSGLGSNSFALSRVLDFCAEPRHGSLSHALKLFQHIQHPTICICNTMI 77

Query: 61  KALLLRGEFLHAILVFSAMLRNGIHPDTYTLPYVLKASARMKNFHLGESVHACVVKLGFV 120
           KA LLRGEFL+AI+++SAM RNGI PD+YT PYVLKA AR+K FHLGESVHAC VKLGFV
Sbjct: 78  KAFLLRGEFLNAIVMYSAMRRNGIAPDSYTHPYVLKACARIKKFHLGESVHACAVKLGFV 137

Query: 121 LDAFVGNSLLVMYCAFGNMRVAGQVFDEMPELSTVSWTVMIYGFAKMGDVDTARRLFDMA 180
           +D FVGNSLLVMYCAFGNM+ AGQ+FDEMPELS VSWTVMIYG+AKMGDV+TAR LFD A
Sbjct: 138 MDVFVGNSLLVMYCAFGNMKDAGQMFDEMPELSAVSWTVMIYGYAKMGDVNTARGLFDRA 197

Query: 181 TVKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTELEPDEAIIVTILCACAHMGALDTGI 240
            +KDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTE+EPDEAIIVTILCACAHMGALD GI
Sbjct: 198 PIKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILCACAHMGALDVGI 257

Query: 241 WIHRYLGQLGLPLTLRVNTGLIDMYAKCGHLDLAKHLFDETSQRDSVCWNVMISGMAMNG 300
           WIHRYL  L LPLTLRV+TGL+DMYAKCGHLD+ ++LFDE  QRD++CWNVMISGMAM+G
Sbjct: 258 WIHRYLSHLELPLTLRVSTGLMDMYAKCGHLDMTRYLFDEMPQRDTICWNVMISGMAMHG 317

Query: 301 DGEGALKLFMEMEKARMKPDDITFIAVLAACSNSGMVDEGLRIWNSMSTIHKIEPKSEHY 360
           DGEGALKLF EMEKAR+KPDDITFIA+LAACSNSGM +EGL+I N MSTIHKIEPK+EHY
Sbjct: 318 DGEGALKLFKEMEKARIKPDDITFIAILAACSNSGMANEGLKILNKMSTIHKIEPKAEHY 377

Query: 361 GCVIDLLSRVGRFQEAEGVIQRLPKSASPSEEAVAWRAFLSACCKHGQMQQAEVAAERLF 420
           GC+IDLLSR GRF+EAEGVIQRLP +A+ SEEAVAWRAFLSACCKHG+MQQAE AAERLF
Sbjct: 378 GCIIDLLSRAGRFEEAEGVIQRLPNTATASEEAVAWRAFLSACCKHGEMQQAEGAAERLF 437

Query: 421 QLERHSGAYVLLSNMYASLGKHGDAKKVRKMMKLKGVEK 460
           +LERHSGAYVLLSNMYA+LGKHGDAK+VRKMMKLKGVEK
Sbjct: 438 ELERHSGAYVLLSNMYAALGKHGDAKRVRKMMKLKGVEK 476

[Close]

BLAST of CaUC09G178660 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 3.6e-89
Identity = 192/564 (34.04%), Postives = 284/564 (50.35%), Query Frame = 0


Query: 1   MNHLKQAHAQVLTSGLHNNNFVLSRLLNFC-ADPRHGSLSHAFKLFQHIQHPTICIYNTM 60
           +  L+  HAQ++  GLHN N+ LS+L+ FC   P    L +A  +F+ IQ P + I+NTM
Sbjct: 46  LQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTM 105

Query: 61  IKALLLRGEFLHAILVFSAMLRNGIHPDTYTLPYVLKASARMKNFHLGESVHACVVKLGF 120
            +   L  + + A+ ++  M+  G+ P++YT P+VLK+ A+ K F  G+ +H  V+KLG 
Sbjct: 106 FRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGC 165

Query: 121 VLDAFVGNSLLVMYCAFGNMRVAGQVFDEMPELSTVSWTVMIYGFAKMGDVDTARRLFDM 180
            LD +V  SL+ MY   G +  A +VFD+ P    VS+T +I G+A  G ++ A++LFD 
Sbjct: 166 DLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDE 225

Query: 181 ATVKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTELEPDEAIIVT-------------- 240
             VKD   W AMISGY +   +KE L +F+ M  T + PDE+ +VT              
Sbjct: 226 IPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELG 285

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 286 RQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHM 345

Query: 301 ---------------------------ILCACAHMGALDTGIWIHRYLGQ--LGLPLTLR 360
                                      IL ACAH+GA+D G WIH Y+ +   G+     
Sbjct: 346 NLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASS 405

Query: 361 VNTGLIDMYAKCGHLDLAKHLFDETSQRDSVCWNVMISGMAMNGDGEGALKLFMEMEKAR 420
           + T LIDMYAKCG ++ A  +F+    +    WN MI G AM+G  + +  LF  M K  
Sbjct: 406 LRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIG 465

Query: 421 MKPDDITFIAVLAACSNSGMVDEGLRIWNSMSTIHKIEPKSEHYGCVIDLLSRVGRFQEA 460
           ++PDDITF+ +L+ACS+SGM+D G  I+ +M+  +K+ PK EHYGC+IDLL   G F+EA
Sbjct: 466 IQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEA 525

[Close]

BLAST of CaUC09G178660 vs. ExPASy Swiss-Prot
Match: Q9SIL5 (Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E78 PE=2 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 4.0e-88
Identity = 166/463 (35.85%), Postives = 277/463 (59.83%), Query Frame = 0


Query: 2   NHLKQAHAQVLTSGLHNNNFVLSRLLNFCADPRHGSLSHAFKLFQHIQHPTICIYNTMIK 61
           N  K+ +A ++  GL  ++F+++++++FC   +   + +A +LF  + +P + +YN++I+
Sbjct: 24  NEWKKINASIIIHGLSQSSFMVTKMVDFC--DKIEDMDYATRLFNQVSNPNVFLYNSIIR 83

Query: 62  ALLLRGEFLHAILVFSAMLRNGIH-PDTYTLPYVLKASARMKNFHLGESVHACVVKLGFV 121
           A      +   I ++  +LR     PD +T P++ K+ A + + +LG+ VH  + K G  
Sbjct: 84  AYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPR 143

Query: 122 LDAFVGNSLLVMYCAFGNMRVAGQVFDEMPELSTVSWTVMIYGFAKMGDVDTARRLFDMA 181
                 N+L+ MY  F ++  A +VFDEM E   +SW  ++ G+A++G +  A+ LF + 
Sbjct: 144 FHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLM 203

Query: 182 TVKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTELEPDEAIIVTILCACAHMGALDTGI 241
             K    W AMISGY    C+ E +  FR MQL  +EPDE  ++++L +CA +G+L+ G 
Sbjct: 204 LDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGK 263

Query: 242 WIHRYLGQLGLPLTLRVNTGLIDMYAKCGHLDLAKHLFDETSQRDSVCWNVMISGMAMNG 301
           WIH Y  + G      V   LI+MY+KCG +  A  LF +   +D + W+ MISG A +G
Sbjct: 264 WIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHG 323

Query: 302 DGEGALKLFMEMEKARMKPDDITFIAVLAACSNSGMVDEGLRIWNSMSTIHKIEPKSEHY 361
           +  GA++ F EM++A++KP+ ITF+ +L+ACS+ GM  EGLR ++ M   ++IEPK EHY
Sbjct: 324 NAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHY 383

Query: 362 GCVIDLLSRVGRFQEAEGVIQRLPKSASPSEEAVAWRAFLSACCKHGQMQQAEVAAERLF 421
           GC+ID+L+R G+ + A  + + +P       ++  W + LS+C   G +  A VA + L 
Sbjct: 384 GCLIDVLARAGKLERAVEITKTMPM----KPDSKIWGSLLSSCRTPGNLDVALVAMDHLV 443

Query: 422 QLE-RHSGAYVLLSNMYASLGKHGDAKKVRKMMKLKGVEKRCG 463
           +LE    G YVLL+N+YA LGK  D  ++RKM++ + ++K  G
Sbjct: 444 ELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPG 480

[Close]

BLAST of CaUC09G178660 vs. ExPASy Swiss-Prot
Match: Q9FG16 (Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H88 PE=3 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 1.6e-84
Identity = 168/465 (36.13%), Postives = 270/465 (58.06%), Query Frame = 0


Query: 4   LKQAHAQVLTSGLHNNNFVLSRLLNFCADPR-----HGSLSHAFKLFQHIQHPTICIYNT 63
           LK  H  +L + L ++ FV SRLL  C D          L +A+ +F  IQ+P + ++N 
Sbjct: 28  LKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQNPNLFVFNL 87

Query: 64  MIKALLLRGEFLHAILVFSAMLRNGIHPDTYTLPYVLKASARMKNFHLGESVHACVVKLG 123
           +I+      E   A   ++ ML++ I PD  T P+++KAS+ M+   +GE  H+ +V+ G
Sbjct: 88  LIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFG 147

Query: 124 FVLDAFVGNSLLVMYCAFGNMRVAGQVFDEMPELSTVSWTVMIYGFAKMGDVDTARRLFD 183
           F  D +V NSL+ MY   G +  AG++F +M     VSWT M+ G+ K G V+ AR +FD
Sbjct: 148 FQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFD 207

Query: 184 MATVKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTELEPDEAIIVTILCACAHMGALDT 243
               ++   W  MI+GY +NNCF++ + +F  M+   +  +E ++V+++ +CAH+GAL+ 
Sbjct: 208 EMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEF 267

Query: 244 GIWIHRYLGQLGLPLTLRVNTGLIDMYAKCGHLDLAKHLFDETSQRDSVCWNVMISGMAM 303
           G   + Y+ +  + + L + T L+DM+ +CG ++ A H+F+   + DS+ W+ +I G+A+
Sbjct: 268 GERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAV 327

Query: 304 NGDGEGALKLFMEMEKARMKPDDITFIAVLAACSNSGMVDEGLRIWNSMSTIHKIEPKSE 363
           +G    A+  F +M      P D+TF AVL+ACS+ G+V++GL I+ +M   H IEP+ E
Sbjct: 328 HGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLE 387

Query: 364 HYGCVIDLLSRVGRFQEAEGVIQRLPKSASPSEEAVAWRAFLSACCKHGQMQQAEVAAER 423
           HYGC++D+L R G+  EAE  I  L     P+   +   A L AC  +   + AE     
Sbjct: 388 HYGCIVDMLGRAGKLAEAENFI--LKMHVKPNAPILG--ALLGACKIYKNTEVAERVGNM 447

Query: 424 LFQLE-RHSGAYVLLSNMYASLGKHGDAKKVRKMMKLKGVEKRCG 463
           L +++  HSG YVLLSN+YA  G+    + +R MMK K V+K  G
Sbjct: 448 LIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPG 488

[Close]

BLAST of CaUC09G178660 vs. ExPASy Swiss-Prot
Match: Q9FMA1 (Pentatricopeptide repeat-containing protein At5g56310 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E13 PE=2 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 3.5e-84
Identity = 170/465 (36.56%), Postives = 276/465 (59.35%), Query Frame = 0


Query: 4   LKQAHAQVLTSGLHNNNFVLSRLLNFCADPRHGSLSHAFKLFQHIQHPTICIYNTMIKAL 63
           LKQ+H  ++ +GL+ +N  +++ +  C++  H  L +A+ +F H   P   ++NTMI+AL
Sbjct: 31  LKQSHCYMIITGLNRDNLNVAKFIEACSNAGH--LRYAYSVFTHQPCPNTYLHNTMIRAL 90

Query: 64  LLRGE---FLHAILVFSAMLRNGIHPDTYTLPYVLKASARMKNFHLGESVHACVVKLGFV 123
            L  E      AI V+  +      PDT+T P+VLK + R+ +   G  +H  VV  GF 
Sbjct: 91  SLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFD 150

Query: 124 LDAFVGNSLLVMYCAFGNMRVAGQVFDEMPELSTVSWTVMIYGFAKMGDVDTARRLFDM- 183
               V   L+ MY + G +  A ++FDEM       W  ++ G+ K+G++D AR L +M 
Sbjct: 151 SSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMM 210

Query: 184 -ATVKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTELEPDEAIIVTILCACAHMGALDT 243
              V++   W  +ISGY ++    E + +F+ M +  +EPDE  ++ +L ACA +G+L+ 
Sbjct: 211 PCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLEL 270

Query: 244 GIWIHRYLGQLGLPLTLRVNTGLIDMYAKCGHLDLAKHLFDETSQRDSVCWNVMISGMAM 303
           G  I  Y+   G+   + +N  +IDMYAK G++  A  +F+  ++R+ V W  +I+G+A 
Sbjct: 271 GERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLAT 330

Query: 304 NGDGEGALKLFMEMEKARMKPDDITFIAVLAACSNSGMVDEGLRIWNSMSTIHKIEPKSE 363
           +G G  AL +F  M KA ++P+D+TFIA+L+ACS+ G VD G R++NSM + + I P  E
Sbjct: 331 HGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIE 390

Query: 364 HYGCVIDLLSRVGRFQEAEGVIQRLPKSASPSEEAVAWRAFLSACCKHGQMQQAEVAAER 423
           HYGC+IDLL R G+ +EA+ VI+ +P  A+    A  W + L+A   H  ++  E A   
Sbjct: 391 HYGCMIDLLGRAGKLREADEVIKSMPFKAN----AAIWGSLLAASNVHHDLELGERALSE 450

Query: 424 LFQLE-RHSGAYVLLSNMYASLGKHGDAKKVRKMMKLKGVEKRCG 463
           L +LE  +SG Y+LL+N+Y++LG+  +++ +R MMK  GV+K  G
Sbjct: 451 LIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAG 489

[Close]

BLAST of CaUC09G178660 vs. ExPASy Swiss-Prot
Match: Q9FJY7 (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 7.9e-84
Identity = 171/458 (37.34%), Postives = 254/458 (55.46%), Query Frame = 0


Query: 4   LKQAHAQVLTSGLHNNNFVLSRLLNFCADPRHGS-LSHAFKLFQHIQHPTICIYNTMIKA 63
           LKQ HA++L +GL  +++ +++ L+FC        L +A  +F     P   ++N MI+ 
Sbjct: 30  LKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRG 89

Query: 64  LLLRGEFLHAILVFSAMLRNGIHPDTYTLPYVLKASARMKNFHLGESVHACVVKLGFVLD 123
                E   ++L++  ML +    + YT P +LKA + +  F     +HA + KLG+  D
Sbjct: 90  FSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYEND 149

Query: 124 AFVGNSLLVMYCAFGNMRVAGQVFDEMPELSTVSWTVMIYGFAKMGDVDTARRLFDMATV 183
            +  NSL+  Y   GN ++A  +FD +PE   VSW  +I G+ K G +D A  LF     
Sbjct: 150 VYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAE 209

Query: 184 KDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTELEPDEAIIVTILCACAHMGALDTGIWI 243
           K+   W  MISGYVQ +  KE L +F  MQ +++EPD   +   L ACA +GAL+ G WI
Sbjct: 210 KNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWI 269

Query: 244 HRYLGQLGLPLTLRVNTGLIDMYAKCGHLDLAKHLFDETSQRDSVCWNVMISGMAMNGDG 303
           H YL +  + +   +   LIDMYAKCG ++ A  +F    ++    W  +ISG A +G G
Sbjct: 270 HSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHG 329

Query: 304 EGALKLFMEMEKARMKPDDITFIAVLAACSNSGMVDEGLRIWNSMSTIHKIEPKSEHYGC 363
             A+  FMEM+K  +KP+ ITF AVL ACS +G+V+EG  I+ SM   + ++P  EHYGC
Sbjct: 330 REAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGC 389

Query: 364 VIDLLSRVGRFQEAEGVIQRLPKSASPSEEAVAWRAFLSACCKHGQMQQAEVAAERLFQL 423
           ++DLL R G   EA+  IQ +P   +    AV W A L AC  H  ++  E   E L  +
Sbjct: 390 IVDLLGRAGLLDEAKRFIQEMPLKPN----AVIWGALLKACRIHKNIELGEEIGEILIAI 449

Query: 424 E-RHSGAYVLLSNMYASLGKHGDAKKVRKMMKLKGVEK 460
           +  H G YV  +N++A   K   A + R++MK +GV K
Sbjct: 450 DPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAK 483

[Close]

BLAST of CaUC09G178660 vs. ExPASy TrEMBL
Match: A0A0A0KNK8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G485180 PE=4 SV=1)

HSP 1 Score: 830.1 bits (2143), Expect = 5.4e-237
Identity = 404/459 (88.02%), Postives = 432/459 (94.12%), Query Frame = 0


Query: 1   MNHLKQAHAQVLTSGLHNNNFVLSRLLNFCADPRHGSLSHAFKLFQHIQHPTICIYNTMI 60
           MN LKQAHAQVL SGLHN+NFVLSRLLNFCA+ R+GSLSHAFKLFQHIQHPTICI+NTMI
Sbjct: 18  MNQLKQAHAQVLKSGLHNSNFVLSRLLNFCAESRNGSLSHAFKLFQHIQHPTICIFNTMI 77

Query: 61  KALLLRGEFLHAILVFSAMLRNGIHPDTYTLPYVLKASARMKNFHLGESVHACVVKLGFV 120
           KALLLRGEFL+AI VFSA+ RNGIHPDTYTLPYVLKASARM N HLGES+HAC +KLG  
Sbjct: 78  KALLLRGEFLNAIAVFSAIFRNGIHPDTYTLPYVLKASARMTNIHLGESIHACTIKLGSA 137

Query: 121 LDAFVGNSLLVMYCAFGNMRVAGQVFDEMPELSTVSWTVMIYGFAKMGDVDTARRLFDMA 180
           ++ FVGNSLLVMY +F NMR A QVFDEMPELS VSWTVMIYG+A MGDVDTAR LFDMA
Sbjct: 138 VNEFVGNSLLVMYRSFDNMRSARQVFDEMPELSAVSWTVMIYGYANMGDVDTARELFDMA 197

Query: 181 TVKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTELEPDEAIIVTILCACAHMGALDTGI 240
           TVKD GIWGAMISGYVQNNCFKEGLHMFRLMQLTE+EPDEAIIVTIL ACAHMGALDTGI
Sbjct: 198 TVKDTGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILSACAHMGALDTGI 257

Query: 241 WIHRYLGQLGLPLTLRVNTGLIDMYAKCGHLDLAKHLFDETSQRDSVCWNVMISGMAMNG 300
           WIHRYLG+LGLPLTLRV+TGLIDMYAKCGHLDLAK+LF+E SQRD+VCWN MISGMAM+G
Sbjct: 258 WIHRYLGRLGLPLTLRVSTGLIDMYAKCGHLDLAKYLFNEMSQRDNVCWNAMISGMAMDG 317

Query: 301 DGEGALKLFMEMEKARMKPDDITFIAVLAACSNSGMVDEGLRIWNSMSTIHKIEPKSEHY 360
           DGEGA+KLFMEMEKA +KPD+ITFIAVLAACSNSGMVDEG+RIWN MST+HKIEPKSEHY
Sbjct: 318 DGEGAIKLFMEMEKAGIKPDNITFIAVLAACSNSGMVDEGIRIWNRMSTVHKIEPKSEHY 377

Query: 361 GCVIDLLSRVGRFQEAEGVIQRLPKSASPSEEAVAWRAFLSACCKHGQMQQAEVAAERLF 420
           GCVIDLLSRVGRF+EAEGVIQRLPK+ASPSEEAVAWRAFLSACCKHGQ QQAEVAAERLF
Sbjct: 378 GCVIDLLSRVGRFEEAEGVIQRLPKTASPSEEAVAWRAFLSACCKHGQTQQAEVAAERLF 437

Query: 421 QLERHSGAYVLLSNMYASLGKHGDAKKVRKMMKLKGVEK 460
           QLERHSGAYVLLSNMYA+LGKH DAK+VR MMKLKGVEK
Sbjct: 438 QLERHSGAYVLLSNMYAALGKHEDAKRVRNMMKLKGVEK 476

[Close]

BLAST of CaUC09G178660 vs. ExPASy TrEMBL
Match: A0A1S4E5C9 (pentatricopeptide repeat-containing protein At2g20540-like OS=Cucumis melo OX=3656 GN=LOC103503327 PE=4 SV=1)

HSP 1 Score: 825.9 bits (2132), Expect = 1.0e-235
Identity = 403/459 (87.80%), Postives = 429/459 (93.46%), Query Frame = 0


Query: 1   MNHLKQAHAQVLTSGLHNNNFVLSRLLNFCADPRHGSLSHAFKLFQHIQHPTICIYNTMI 60
           MNHLKQAHAQVLTSGLHN+NFVLS+LLNFCA+ R+GSLSHAFKLFQHIQHPTICI NTMI
Sbjct: 18  MNHLKQAHAQVLTSGLHNSNFVLSKLLNFCAESRNGSLSHAFKLFQHIQHPTICICNTMI 77

Query: 61  KALLLRGEFLHAILVFSAMLRNGIHPDTYTLPYVLKASARMKNFHLGESVHACVVKLGFV 120
           KALLLRGEFL+AI+VFSAM RNGIHPDTYTLPYVLKASARM N HLGES+HAC +KLGF 
Sbjct: 78  KALLLRGEFLNAIVVFSAMFRNGIHPDTYTLPYVLKASARMTNIHLGESIHACTIKLGFA 137

Query: 121 LDAFVGNSLLVMYCAFGNMRVAGQVFDEMPELSTVSWTVMIYGFAKMGDVDTARRLFDMA 180
           +D FVGNSLLVMY +F  M  A QVFDEMPELS VSWTVMIYG+A MGDVDTAR LFDMA
Sbjct: 138 VDEFVGNSLLVMYRSFDKMTSARQVFDEMPELSAVSWTVMIYGYANMGDVDTARELFDMA 197

Query: 181 TVKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTELEPDEAIIVTILCACAHMGALDTGI 240
           TVKD GIWGAMISGYVQNNCFKEGLHMFRLMQLTE+EPDEAIIVTIL ACAHMGALDTGI
Sbjct: 198 TVKDTGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILSACAHMGALDTGI 257

Query: 241 WIHRYLGQLGLPLTLRVNTGLIDMYAKCGHLDLAKHLFDETSQRDSVCWNVMISGMAMNG 300
           WIHRYLG+LGL LTLRV TGLIDMYAKCGHLDLAK+LF+E SQRD+VCWN MISGMAM+G
Sbjct: 258 WIHRYLGRLGLSLTLRVRTGLIDMYAKCGHLDLAKYLFNEMSQRDNVCWNAMISGMAMDG 317

Query: 301 DGEGALKLFMEMEKARMKPDDITFIAVLAACSNSGMVDEGLRIWNSMSTIHKIEPKSEHY 360
           DGEGA+KLFMEMEKA +KPD+ITFIAVLAACSNSGMVDEG+RIWN MSTIHKIEPKSEHY
Sbjct: 318 DGEGAIKLFMEMEKAGIKPDNITFIAVLAACSNSGMVDEGIRIWNRMSTIHKIEPKSEHY 377

Query: 361 GCVIDLLSRVGRFQEAEGVIQRLPKSASPSEEAVAWRAFLSACCKHGQMQQAEVAAERLF 420
           GCVIDLLSRVGRF+EAE VI RLPK+A+PSEEAVAWRAFLSACCKHGQ QQAEVAAERLF
Sbjct: 378 GCVIDLLSRVGRFEEAEAVILRLPKTANPSEEAVAWRAFLSACCKHGQTQQAEVAAERLF 437

Query: 421 QLERHSGAYVLLSNMYASLGKHGDAKKVRKMMKLKGVEK 460
           QLERHSGAYVLLSNMYA+LGKH DAK+VR MMKLKGVEK
Sbjct: 438 QLERHSGAYVLLSNMYAALGKHEDAKRVRNMMKLKGVEK 476

[Close]

BLAST of CaUC09G178660 vs. ExPASy TrEMBL
Match: A0A5D3DJ94 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold278G00090 PE=4 SV=1)

HSP 1 Score: 824.3 bits (2128), Expect = 3.0e-235
Identity = 402/459 (87.58%), Postives = 428/459 (93.25%), Query Frame = 0


Query: 1   MNHLKQAHAQVLTSGLHNNNFVLSRLLNFCADPRHGSLSHAFKLFQHIQHPTICIYNTMI 60
           MNHLKQAHAQVLTSGLHN+NFVLS+LLNFCA+ R+GSLSHAFKLFQHIQHPTICI NTMI
Sbjct: 18  MNHLKQAHAQVLTSGLHNSNFVLSKLLNFCAESRNGSLSHAFKLFQHIQHPTICICNTMI 77

Query: 61  KALLLRGEFLHAILVFSAMLRNGIHPDTYTLPYVLKASARMKNFHLGESVHACVVKLGFV 120
           KALLLRGEFL+AI+VFSAM RNGIHPDTYTLPYVLKASARM N HLGES+HAC +KLGF 
Sbjct: 78  KALLLRGEFLNAIVVFSAMFRNGIHPDTYTLPYVLKASARMTNIHLGESIHACTIKLGFA 137

Query: 121 LDAFVGNSLLVMYCAFGNMRVAGQVFDEMPELSTVSWTVMIYGFAKMGDVDTARRLFDMA 180
           +D FVGNSLLVMY +F  M  A QVFDEMPELS VSWTVMIYG+A MGDVDTAR LFDMA
Sbjct: 138 VDEFVGNSLLVMYRSFDKMTSARQVFDEMPELSAVSWTVMIYGYANMGDVDTARELFDMA 197

Query: 181 TVKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTELEPDEAIIVTILCACAHMGALDTGI 240
           TVKD GIWGAMISGYVQNNCFKEGLHMFRLMQLTE+EPDEAIIVTIL ACAHMGA DTGI
Sbjct: 198 TVKDTGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILSACAHMGAFDTGI 257

Query: 241 WIHRYLGQLGLPLTLRVNTGLIDMYAKCGHLDLAKHLFDETSQRDSVCWNVMISGMAMNG 300
           WIHRYLG+LGL LTLRV TGLIDMYAKCGHLDLAK+LF+E SQRD+VCWN MISGMAM+G
Sbjct: 258 WIHRYLGRLGLSLTLRVRTGLIDMYAKCGHLDLAKYLFNEMSQRDNVCWNAMISGMAMDG 317

Query: 301 DGEGALKLFMEMEKARMKPDDITFIAVLAACSNSGMVDEGLRIWNSMSTIHKIEPKSEHY 360
           DGEGA+KLFMEMEKA +KPD+ITFIAVLAACSNSGMVDEG+RIWN MSTIHKIEPKSEHY
Sbjct: 318 DGEGAIKLFMEMEKAGIKPDNITFIAVLAACSNSGMVDEGIRIWNRMSTIHKIEPKSEHY 377

Query: 361 GCVIDLLSRVGRFQEAEGVIQRLPKSASPSEEAVAWRAFLSACCKHGQMQQAEVAAERLF 420
           GCVIDLLSRVGRF+EAE VI RLPK+A+PSEEAVAWRAFLSACCKHGQ QQAEVAAERLF
Sbjct: 378 GCVIDLLSRVGRFEEAEAVILRLPKTANPSEEAVAWRAFLSACCKHGQTQQAEVAAERLF 437

Query: 421 QLERHSGAYVLLSNMYASLGKHGDAKKVRKMMKLKGVEK 460
           QLERHSGAYVLLSNMYA+LGKH DAK+VR MMKLKGVEK
Sbjct: 438 QLERHSGAYVLLSNMYAALGKHEDAKRVRNMMKLKGVEK 476

[Close]

BLAST of CaUC09G178660 vs. ExPASy TrEMBL
Match: A0A6J1I746 (pentatricopeptide repeat-containing protein At2g20540-like OS=Cucurbita maxima OX=3661 GN=LOC111471855 PE=4 SV=1)

HSP 1 Score: 803.5 bits (2074), Expect = 5.4e-229
Identity = 386/459 (84.10%), Postives = 425/459 (92.59%), Query Frame = 0


Query: 1   MNHLKQAHAQVLTSGLHNNNFVLSRLLNFCADPRHGSLSHAFKLFQHIQHPTICIYNTMI 60
           M  LKQAHAQVLTSGL +N+F LSR+L+FCA+PRHGSLSHA KLFQHIQHPTICI NTMI
Sbjct: 18  MKQLKQAHAQVLTSGLGSNSFALSRVLDFCAEPRHGSLSHALKLFQHIQHPTICICNTMI 77

Query: 61  KALLLRGEFLHAILVFSAMLRNGIHPDTYTLPYVLKASARMKNFHLGESVHACVVKLGFV 120
           KA LLRGEFL+AI+++SAM RNGI PD+YT PYVLKA AR+K FHLGESVHAC VKLGFV
Sbjct: 78  KAFLLRGEFLNAIVMYSAMRRNGIAPDSYTHPYVLKACARIKKFHLGESVHACAVKLGFV 137

Query: 121 LDAFVGNSLLVMYCAFGNMRVAGQVFDEMPELSTVSWTVMIYGFAKMGDVDTARRLFDMA 180
           +D FVGNSLLVMYCAFGNM+ AGQ+FDEMPELS VSWTVMIYG+AKMGDV+TAR LFD A
Sbjct: 138 MDVFVGNSLLVMYCAFGNMKDAGQMFDEMPELSAVSWTVMIYGYAKMGDVNTARGLFDRA 197

Query: 181 TVKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTELEPDEAIIVTILCACAHMGALDTGI 240
            +KDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTE+EPDEAIIVTILCACAHMGALD GI
Sbjct: 198 PIKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILCACAHMGALDVGI 257

Query: 241 WIHRYLGQLGLPLTLRVNTGLIDMYAKCGHLDLAKHLFDETSQRDSVCWNVMISGMAMNG 300
           WIHRYL  L LPLTLRV+TGL+DMYAKCGHLD+ ++LFDE  QRD++CWNVMISGMAM+G
Sbjct: 258 WIHRYLSHLELPLTLRVSTGLMDMYAKCGHLDMTRYLFDEMPQRDTICWNVMISGMAMHG 317

Query: 301 DGEGALKLFMEMEKARMKPDDITFIAVLAACSNSGMVDEGLRIWNSMSTIHKIEPKSEHY 360
           DGEGALKLF EMEKAR+KPDDITFIA+LAACSNSGM +EGL+I N MSTIHKIEPK+EHY
Sbjct: 318 DGEGALKLFKEMEKARIKPDDITFIAILAACSNSGMANEGLKILNKMSTIHKIEPKAEHY 377

Query: 361 GCVIDLLSRVGRFQEAEGVIQRLPKSASPSEEAVAWRAFLSACCKHGQMQQAEVAAERLF 420
           GC+IDLLSR GRF+EAEGVIQRLP +A+ SEEAVAWRAFLSACCKHG+MQQAE AAERLF
Sbjct: 378 GCIIDLLSRAGRFEEAEGVIQRLPNTATASEEAVAWRAFLSACCKHGEMQQAEGAAERLF 437

Query: 421 QLERHSGAYVLLSNMYASLGKHGDAKKVRKMMKLKGVEK 460
           +LERHSGAYVLLSNMYA+LGKHGDAK+VRKMMKLKGVEK
Sbjct: 438 ELERHSGAYVLLSNMYAALGKHGDAKRVRKMMKLKGVEK 476

[Close]

BLAST of CaUC09G178660 vs. ExPASy TrEMBL
Match: A0A6J1GK82 (pentatricopeptide repeat-containing protein At2g20540-like OS=Cucurbita moschata OX=3662 GN=LOC111454648 PE=4 SV=1)

HSP 1 Score: 802.7 bits (2072), Expect = 9.2e-229
Identity = 387/459 (84.31%), Postives = 423/459 (92.16%), Query Frame = 0


Query: 1   MNHLKQAHAQVLTSGLHNNNFVLSRLLNFCADPRHGSLSHAFKLFQHIQHPTICIYNTMI 60
           M  LKQAHAQVLTSGL +N+F LSRLL+FCA+PRHGSLSHA KL++HIQHPTICI NTMI
Sbjct: 18  MKQLKQAHAQVLTSGLGSNSFALSRLLDFCAEPRHGSLSHALKLYRHIQHPTICICNTMI 77

Query: 61  KALLLRGEFLHAILVFSAMLRNGIHPDTYTLPYVLKASARMKNFHLGESVHACVVKLGFV 120
           KA LLRGEFL+AI+++SAM RN I PD+YT PYVLKA AR+K FHLGESVHAC VKLGFV
Sbjct: 78  KAFLLRGEFLNAIVIYSAMRRNEIAPDSYTHPYVLKACARIKKFHLGESVHACAVKLGFV 137

Query: 121 LDAFVGNSLLVMYCAFGNMRVAGQVFDEMPELSTVSWTVMIYGFAKMGDVDTARRLFDMA 180
           LD FVGNSLLVMYCAFGNMR AGQVFDEMPELS VSWTVMIYG+AKMGDV+TAR LFD A
Sbjct: 138 LDVFVGNSLLVMYCAFGNMRDAGQVFDEMPELSAVSWTVMIYGYAKMGDVNTARGLFDRA 197

Query: 181 TVKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTELEPDEAIIVTILCACAHMGALDTGI 240
            +KDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTE+EPDEAIIVTILCACAHMGALD GI
Sbjct: 198 PIKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILCACAHMGALDIGI 257

Query: 241 WIHRYLGQLGLPLTLRVNTGLIDMYAKCGHLDLAKHLFDETSQRDSVCWNVMISGMAMNG 300
           WIHRYL  L LPLTLRV+TGL+DMYAKCGHLD+ +HLFDE  QRD++CWNVMISGMAM+G
Sbjct: 258 WIHRYLSHLELPLTLRVSTGLMDMYAKCGHLDMTRHLFDEMPQRDTICWNVMISGMAMHG 317

Query: 301 DGEGALKLFMEMEKARMKPDDITFIAVLAACSNSGMVDEGLRIWNSMSTIHKIEPKSEHY 360
           DGEGALKLF EMEKAR+KPDDITFIA+LAACSNSGM +EGL+I N M TIHKIEPK+EHY
Sbjct: 318 DGEGALKLFKEMEKARIKPDDITFIAILAACSNSGMANEGLKILNKMCTIHKIEPKAEHY 377

Query: 361 GCVIDLLSRVGRFQEAEGVIQRLPKSASPSEEAVAWRAFLSACCKHGQMQQAEVAAERLF 420
           GC+IDLLSR GRF+EAEGVIQRLP +A+ SEEAVAWRAFLSACCKHG+MQQAE AAERLF
Sbjct: 378 GCIIDLLSRAGRFEEAEGVIQRLPNTATASEEAVAWRAFLSACCKHGEMQQAEGAAERLF 437

Query: 421 QLERHSGAYVLLSNMYASLGKHGDAKKVRKMMKLKGVEK 460
           +LERHSGAYVLLSNMYA+LGKHGDAK+VRKMMKLKGVEK
Sbjct: 438 ELERHSGAYVLLSNMYAALGKHGDAKRVRKMMKLKGVEK 476

[Close]

BLAST of CaUC09G178660 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 330.5 bits (846), Expect = 2.6e-90
Identity = 192/564 (34.04%), Postives = 284/564 (50.35%), Query Frame = 0


Query: 1   MNHLKQAHAQVLTSGLHNNNFVLSRLLNFC-ADPRHGSLSHAFKLFQHIQHPTICIYNTM 60
           +  L+  HAQ++  GLHN N+ LS+L+ FC   P    L +A  +F+ IQ P + I+NTM
Sbjct: 46  LQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTM 105

Query: 61  IKALLLRGEFLHAILVFSAMLRNGIHPDTYTLPYVLKASARMKNFHLGESVHACVVKLGF 120
            +   L  + + A+ ++  M+  G+ P++YT P+VLK+ A+ K F  G+ +H  V+KLG 
Sbjct: 106 FRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGC 165

Query: 121 VLDAFVGNSLLVMYCAFGNMRVAGQVFDEMPELSTVSWTVMIYGFAKMGDVDTARRLFDM 180
            LD +V  SL+ MY   G +  A +VFD+ P    VS+T +I G+A  G ++ A++LFD 
Sbjct: 166 DLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDE 225

Query: 181 ATVKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTELEPDEAIIVT-------------- 240
             VKD   W AMISGY +   +KE L +F+ M  T + PDE+ +VT              
Sbjct: 226 IPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELG 285

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 286 RQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHM 345

Query: 301 ---------------------------ILCACAHMGALDTGIWIHRYLGQ--LGLPLTLR 360
                                      IL ACAH+GA+D G WIH Y+ +   G+     
Sbjct: 346 NLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASS 405

Query: 361 VNTGLIDMYAKCGHLDLAKHLFDETSQRDSVCWNVMISGMAMNGDGEGALKLFMEMEKAR 420
           + T LIDMYAKCG ++ A  +F+    +    WN MI G AM+G  + +  LF  M K  
Sbjct: 406 LRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIG 465

Query: 421 MKPDDITFIAVLAACSNSGMVDEGLRIWNSMSTIHKIEPKSEHYGCVIDLLSRVGRFQEA 460
           ++PDDITF+ +L+ACS+SGM+D G  I+ +M+  +K+ PK EHYGC+IDLL   G F+EA
Sbjct: 466 IQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEA 525

[Close]

BLAST of CaUC09G178660 vs. TAIR 10
Match: AT2G20540.1 (mitochondrial editing factor 21 )

HSP 1 Score: 327.0 bits (837), Expect = 2.9e-89
Identity = 166/463 (35.85%), Postives = 277/463 (59.83%), Query Frame = 0


Query: 2   NHLKQAHAQVLTSGLHNNNFVLSRLLNFCADPRHGSLSHAFKLFQHIQHPTICIYNTMIK 61
           N  K+ +A ++  GL  ++F+++++++FC   +   + +A +LF  + +P + +YN++I+
Sbjct: 24  NEWKKINASIIIHGLSQSSFMVTKMVDFC--DKIEDMDYATRLFNQVSNPNVFLYNSIIR 83

Query: 62  ALLLRGEFLHAILVFSAMLRNGIH-PDTYTLPYVLKASARMKNFHLGESVHACVVKLGFV 121
           A      +   I ++  +LR     PD +T P++ K+ A + + +LG+ VH  + K G  
Sbjct: 84  AYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPR 143

Query: 122 LDAFVGNSLLVMYCAFGNMRVAGQVFDEMPELSTVSWTVMIYGFAKMGDVDTARRLFDMA 181
                 N+L+ MY  F ++  A +VFDEM E   +SW  ++ G+A++G +  A+ LF + 
Sbjct: 144 FHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLM 203

Query: 182 TVKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTELEPDEAIIVTILCACAHMGALDTGI 241
             K    W AMISGY    C+ E +  FR MQL  +EPDE  ++++L +CA +G+L+ G 
Sbjct: 204 LDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGK 263

Query: 242 WIHRYLGQLGLPLTLRVNTGLIDMYAKCGHLDLAKHLFDETSQRDSVCWNVMISGMAMNG 301
           WIH Y  + G      V   LI+MY+KCG +  A  LF +   +D + W+ MISG A +G
Sbjct: 264 WIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHG 323

Query: 302 DGEGALKLFMEMEKARMKPDDITFIAVLAACSNSGMVDEGLRIWNSMSTIHKIEPKSEHY 361
           +  GA++ F EM++A++KP+ ITF+ +L+ACS+ GM  EGLR ++ M   ++IEPK EHY
Sbjct: 324 NAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHY 383

Query: 362 GCVIDLLSRVGRFQEAEGVIQRLPKSASPSEEAVAWRAFLSACCKHGQMQQAEVAAERLF 421
           GC+ID+L+R G+ + A  + + +P       ++  W + LS+C   G +  A VA + L 
Sbjct: 384 GCLIDVLARAGKLERAVEITKTMPM----KPDSKIWGSLLSSCRTPGNLDVALVAMDHLV 443

Query: 422 QLE-RHSGAYVLLSNMYASLGKHGDAKKVRKMMKLKGVEKRCG 463
           +LE    G YVLL+N+YA LGK  D  ++RKM++ + ++K  G
Sbjct: 444 ELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPG 480

[Close]

BLAST of CaUC09G178660 vs. TAIR 10
Match: AT5G06540.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 315.1 bits (806), Expect = 1.1e-85
Identity = 168/465 (36.13%), Postives = 270/465 (58.06%), Query Frame = 0


Query: 4   LKQAHAQVLTSGLHNNNFVLSRLLNFCADPR-----HGSLSHAFKLFQHIQHPTICIYNT 63
           LK  H  +L + L ++ FV SRLL  C D          L +A+ +F  IQ+P + ++N 
Sbjct: 28  LKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQNPNLFVFNL 87

Query: 64  MIKALLLRGEFLHAILVFSAMLRNGIHPDTYTLPYVLKASARMKNFHLGESVHACVVKLG 123
           +I+      E   A   ++ ML++ I PD  T P+++KAS+ M+   +GE  H+ +V+ G
Sbjct: 88  LIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFG 147

Query: 124 FVLDAFVGNSLLVMYCAFGNMRVAGQVFDEMPELSTVSWTVMIYGFAKMGDVDTARRLFD 183
           F  D +V NSL+ MY   G +  AG++F +M     VSWT M+ G+ K G V+ AR +FD
Sbjct: 148 FQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFD 207

Query: 184 MATVKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTELEPDEAIIVTILCACAHMGALDT 243
               ++   W  MI+GY +NNCF++ + +F  M+   +  +E ++V+++ +CAH+GAL+ 
Sbjct: 208 EMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEF 267

Query: 244 GIWIHRYLGQLGLPLTLRVNTGLIDMYAKCGHLDLAKHLFDETSQRDSVCWNVMISGMAM 303
           G   + Y+ +  + + L + T L+DM+ +CG ++ A H+F+   + DS+ W+ +I G+A+
Sbjct: 268 GERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAV 327

Query: 304 NGDGEGALKLFMEMEKARMKPDDITFIAVLAACSNSGMVDEGLRIWNSMSTIHKIEPKSE 363
           +G    A+  F +M      P D+TF AVL+ACS+ G+V++GL I+ +M   H IEP+ E
Sbjct: 328 HGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLE 387

Query: 364 HYGCVIDLLSRVGRFQEAEGVIQRLPKSASPSEEAVAWRAFLSACCKHGQMQQAEVAAER 423
           HYGC++D+L R G+  EAE  I  L     P+   +   A L AC  +   + AE     
Sbjct: 388 HYGCIVDMLGRAGKLAEAENFI--LKMHVKPNAPILG--ALLGACKIYKNTEVAERVGNM 447

Query: 424 LFQLE-RHSGAYVLLSNMYASLGKHGDAKKVRKMMKLKGVEKRCG 463
           L +++  HSG YVLLSN+YA  G+    + +R MMK K V+K  G
Sbjct: 448 LIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPG 488

[Close]

BLAST of CaUC09G178660 vs. TAIR 10
Match: AT5G56310.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 313.9 bits (803), Expect = 2.5e-85
Identity = 170/465 (36.56%), Postives = 276/465 (59.35%), Query Frame = 0


Query: 4   LKQAHAQVLTSGLHNNNFVLSRLLNFCADPRHGSLSHAFKLFQHIQHPTICIYNTMIKAL 63
           LKQ+H  ++ +GL+ +N  +++ +  C++  H  L +A+ +F H   P   ++NTMI+AL
Sbjct: 31  LKQSHCYMIITGLNRDNLNVAKFIEACSNAGH--LRYAYSVFTHQPCPNTYLHNTMIRAL 90

Query: 64  LLRGE---FLHAILVFSAMLRNGIHPDTYTLPYVLKASARMKNFHLGESVHACVVKLGFV 123
            L  E      AI V+  +      PDT+T P+VLK + R+ +   G  +H  VV  GF 
Sbjct: 91  SLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFD 150

Query: 124 LDAFVGNSLLVMYCAFGNMRVAGQVFDEMPELSTVSWTVMIYGFAKMGDVDTARRLFDM- 183
               V   L+ MY + G +  A ++FDEM       W  ++ G+ K+G++D AR L +M 
Sbjct: 151 SSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMM 210

Query: 184 -ATVKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTELEPDEAIIVTILCACAHMGALDT 243
              V++   W  +ISGY ++    E + +F+ M +  +EPDE  ++ +L ACA +G+L+ 
Sbjct: 211 PCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLEL 270

Query: 244 GIWIHRYLGQLGLPLTLRVNTGLIDMYAKCGHLDLAKHLFDETSQRDSVCWNVMISGMAM 303
           G  I  Y+   G+   + +N  +IDMYAK G++  A  +F+  ++R+ V W  +I+G+A 
Sbjct: 271 GERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLAT 330

Query: 304 NGDGEGALKLFMEMEKARMKPDDITFIAVLAACSNSGMVDEGLRIWNSMSTIHKIEPKSE 363
           +G G  AL +F  M KA ++P+D+TFIA+L+ACS+ G VD G R++NSM + + I P  E
Sbjct: 331 HGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIE 390

Query: 364 HYGCVIDLLSRVGRFQEAEGVIQRLPKSASPSEEAVAWRAFLSACCKHGQMQQAEVAAER 423
           HYGC+IDLL R G+ +EA+ VI+ +P  A+    A  W + L+A   H  ++  E A   
Sbjct: 391 HYGCMIDLLGRAGKLREADEVIKSMPFKAN----AAIWGSLLAASNVHHDLELGERALSE 450

Query: 424 LFQLE-RHSGAYVLLSNMYASLGKHGDAKKVRKMMKLKGVEKRCG 463
           L +LE  +SG Y+LL+N+Y++LG+  +++ +R MMK  GV+K  G
Sbjct: 451 LIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAG 489

[Close]

BLAST of CaUC09G178660 vs. TAIR 10
Match: AT5G66520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 312.8 bits (800), Expect = 5.6e-85
Identity = 171/458 (37.34%), Postives = 254/458 (55.46%), Query Frame = 0


Query: 4   LKQAHAQVLTSGLHNNNFVLSRLLNFCADPRHGS-LSHAFKLFQHIQHPTICIYNTMIKA 63
           LKQ HA++L +GL  +++ +++ L+FC        L +A  +F     P   ++N MI+ 
Sbjct: 30  LKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRG 89

Query: 64  LLLRGEFLHAILVFSAMLRNGIHPDTYTLPYVLKASARMKNFHLGESVHACVVKLGFVLD 123
                E   ++L++  ML +    + YT P +LKA + +  F     +HA + KLG+  D
Sbjct: 90  FSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYEND 149

Query: 124 AFVGNSLLVMYCAFGNMRVAGQVFDEMPELSTVSWTVMIYGFAKMGDVDTARRLFDMATV 183
            +  NSL+  Y   GN ++A  +FD +PE   VSW  +I G+ K G +D A  LF     
Sbjct: 150 VYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAE 209

Query: 184 KDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTELEPDEAIIVTILCACAHMGALDTGIWI 243
           K+   W  MISGYVQ +  KE L +F  MQ +++EPD   +   L ACA +GAL+ G WI
Sbjct: 210 KNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWI 269

Query: 244 HRYLGQLGLPLTLRVNTGLIDMYAKCGHLDLAKHLFDETSQRDSVCWNVMISGMAMNGDG 303
           H YL +  + +   +   LIDMYAKCG ++ A  +F    ++    W  +ISG A +G G
Sbjct: 270 HSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHG 329

Query: 304 EGALKLFMEMEKARMKPDDITFIAVLAACSNSGMVDEGLRIWNSMSTIHKIEPKSEHYGC 363
             A+  FMEM+K  +KP+ ITF AVL ACS +G+V+EG  I+ SM   + ++P  EHYGC
Sbjct: 330 REAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGC 389

Query: 364 VIDLLSRVGRFQEAEGVIQRLPKSASPSEEAVAWRAFLSACCKHGQMQQAEVAAERLFQL 423
           ++DLL R G   EA+  IQ +P   +    AV W A L AC  H  ++  E   E L  +
Sbjct: 390 IVDLLGRAGLLDEAKRFIQEMPLKPN----AVIWGALLKACRIHKNIELGEEIGEILIAI 449

Query: 424 E-RHSGAYVLLSNMYASLGKHGDAKKVRKMMKLKGVEK 460
           +  H G YV  +N++A   K   A + R++MK +GV K
Sbjct: 450 DPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAK 483

The following BLAST results are available for this feature:

BLAST of CaUC09G178660 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038890502.1	1.7e-245	91.07	pentatricopeptide repeat-containing protein At2g20540-like [Benincasa hispida]	[more]
XP_004143828.1	1.1e-236	88.02	pentatricopeptide repeat-containing protein At2g20540 [Cucumis sativus]	[more]
XP_016903441.1	2.1e-235	87.80	PREDICTED: pentatricopeptide repeat-containing protein At2g20540-like [Cucumis m...	[more]
KAA0040513.1	6.1e-235	87.58	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK23450...	[more]
XP_022973287.1	1.1e-228	84.10	pentatricopeptide repeat-containing protein At2g20540-like [Cucurbita maxima]	[more]

BLAST of CaUC09G178660 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LN01	3.6e-89	34.04	Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop...	[more]
Q9SIL5	4.0e-88	35.85	Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX...	[more]
Q9FG16	1.6e-84	36.13	Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana OX...	[more]
Q9FMA1	3.5e-84	36.56	Pentatricopeptide repeat-containing protein At5g56310 OS=Arabidopsis thaliana OX...	[more]
Q9FJY7	7.9e-84	37.34	Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX...	[more]

BLAST of CaUC09G178660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KNK8	5.4e-237	88.02	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G485180 PE=4 SV=1	[more]
A0A1S4E5C9	1.0e-235	87.80	pentatricopeptide repeat-containing protein At2g20540-like OS=Cucumis melo OX=36...	[more]
A0A5D3DJ94	3.0e-235	87.58	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A6J1I746	5.4e-229	84.10	pentatricopeptide repeat-containing protein At2g20540-like OS=Cucurbita maxima O...	[more]
A0A6J1GK82	9.2e-229	84.31	pentatricopeptide repeat-containing protein At2g20540-like OS=Cucurbita moschata...	[more]

BLAST of CaUC09G178660 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G08070.1	2.6e-90	34.04	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G20540.1	2.9e-89	35.85	mitochondrial editing factor 21	[more]
AT5G06540.1	1.1e-85	36.13	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G56310.1	2.5e-85	36.56	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G66520.1	5.6e-85	37.34	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 51..98 e-value: 1.3E-8 score: 34.9 coord: 285..332 e-value: 2.8E-12 score: 46.6
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 188..220 e-value: 3.6E-6 score: 24.8 coord: 287..320 e-value: 9.8E-8 score: 29.7 coord: 155..179 e-value: 1.2E-4 score: 20.0 coord: 55..88 e-value: 5.9E-7 score: 27.3
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 394..413 e-value: 0.32 score: 11.3 coord: 429..457 e-value: 0.52 score: 10.7 coord: 187..212 e-value: 4.4E-4 score: 20.3 coord: 260..280 e-value: 0.11 score: 12.8 coord: 359..384 e-value: 0.27 score: 11.6 coord: 155..179 e-value: 1.7E-4 score: 21.6 coord: 127..151 e-value: 0.11 score: 12.8
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 52..86 score: 9.832344
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 285..319 score: 11.597113
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 184..218 score: 9.45966
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 3..139 e-value: 7.3E-17 score: 63.3
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 140..256 e-value: 8.0E-20 score: 73.5
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 259..483 e-value: 1.3E-39 score: 138.4
None	No IPR available	PANTHER	PTHR47928	REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED	coord: 1..476
None	No IPR available	PANTHER	PTHR47928:SF89	PPR CONTAINING PLANT-LIKE PROTEIN	coord: 1..476

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC09G178660.1	CaUC09G178660.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1900865	chloroplast RNA modification
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0005515	protein binding