CaUC09G178390 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC09G178390
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Peptidyl-prolyl cis-trans isomerase
Location	Ciama_Chr09: 37625214 .. 37629680 (+)
RNA-Seq Expression	CaUC09G178390
Synteny	CaUC09G178390

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAAAACCGGGGAGTTTTAGGGTATAAATTCTCTTAGCTAAGAATCCTTCTCTTTTTATTAGAGACTAACAATCGATGATATCAGTTGGAATCTCTGTGCAATTGAGAATCTAAAGCTTGTAGATGGGGAAAGACTCAAAGGCAAAGGAGGCGGGTGGTAAAGGCAAGGGGAAGGCAAAGCAAGCAGGTTCTGGAGCCGATGAAAGTGCTTCCAAAGGAAAGGGAAAATCCGGAAAAGCTGCTTCCGATGGCCTCGGAACTTGCACTTATGTCAAAGGTTTTCCCTCTTTCTGTCTCTCTTTTCTATTTCATTAACTTCAATCCTATTTACAGGGTTAGAAATTACTGTAGGTTTAGGGATTTGGCTCCATCATTCTTATTTTTTTTCCCTTCAATTTGTTGTTTAGCGAGGCATATACTGTCCGAGAAGCAGGGTAAAATCAATGAAGCCTACAAGAAGTTGCAGGACGGTTGGCTTAGCAATGGAGACAAGGTTCCTCCCGCAGAGTTTGCTAAGGTTGGATTTTTTTTTTTTTTTTTTTTGTTCTTCTTCTTCTTATTATTTTTTGTTTTGTTTATTATGTGACCATTTGCAATTCTGTATAAGAAAAGCGGAATTAAATCTTTAGTTACAGATCTTGATATTCTAGCTTAGCTTAACTCACTGATGGGCAACATTGAGATGCTGTTGAGTGTGGTTGTTTGATACAATCGTAAGTGGAAAGAGATGAGTTTTCTAATATACACGTCACTTACCATGTGATTTTTTGTGGGTATTCTATGTTAAATGTGGCGAATTGGTACTTCAGAGGAAGGATTTTTACATTCATTTCCTCTTTTTCTCAAAAATCTTGAATTTTCTTAACACCTAAATGTTAAATGTTGTAGGGTTAGTCAGGTTGTCTCGTGAGATTAGTCTAGATTTGCATAAGTTGTCTGGACACTCACATATATATAAAAAAAATTGTTTCCATTTTTTAAATGTGATGAATAGGTAAATTCGGGAGATAACCACTATGAATTTACTAATGATCTAAATGATATTTTGTAACCCAATTGCATATTAGCTCTCAAAGTTACTGATGCTGATGGTTACTTAGAATACTCATATCTTAAAATTGTTTTCTAAACTTACAAAGGTTCTTAATTTAGCCTACAGAACTAAGTAATTATTAAAATCTTGTACTTTGTAAGCTAGTTTAGATGCTCATGAACAGGGGACAAAGTAACAATCAAAGAAATCCTTTCCATGAATTCTATGTTCTAGGTAACTGAATATCATTCCAAGGGCTGAGTGTTTTACCCCTCTCTAGTAAATTGGCTACCCAAGATAGATTTTGTTTCTTAAAATTTGACGTTCAGAGTGTGCATTGCTCGTACATGTAAGATTATCAATACATTTATGGGATACATTCGAAGACTTTGATTGAGAGATAGAGAATATGTATATCCCTTTTATTTTCTTGTGTTTAGGTGTATGAACAATATCAGGTGGTTGAGGTCCGTTTGTGTTTAAGCAAAGTCTTTTGTGGGTTTCAATGAGAAGGTATATAAGAATAGGGTTGTCACCATTGAGAAATGTTGTTATTGTTCCATATTAACCTATCTGTAGCTGACTCAATTATAGCTGTAATTGAAAGCAGTTGACAAACCAAGGAACTAACTTAGTATTCAAATGGTTTAACGAAGTCCTTACCTTATATGGTTAAGGTTCAATAAGCTTAATCTCTTGTAGCCATTTACTGTCTTTCAATTATTGATCAACTTCTACTACTTGAGCAGTCTTTGTTGTTTAAGGAAACTGCCCGTTCATTTAATTTATATATTTTTTGAGTTCAACAATTGAGGGGTGGAGGATAAACCATCATTCTTTGGCAACTGTCTGCACCTATATATAAGTGAGTAAATACATTGGTTTTTTTGTTTGTTTTTGTTGAAAAAAATGTTGATTTGTTTTAAATATAACATAGAAAAAGAAGAAATAAAGAAAAATGACGAAAGAAAATACATAGAAATGAAAGACAAACAAGTTCCTTCGGGGACATACGATAGAAATGAAAGACAAACAAAATGGTCATGAGGAGATTCCCTAGACATTGGAATCTTTGAAAATCATGAATTCAGGAGAATGTCAAAACATGCCTATCGTTTGGTCATCCTAAGTTGTTTAGGTATACTATGTTCATGTCAAACAAATGCAGGAATCTAGATACTTATCCCTGAGAGTTTGAGGCAAGGTGATGTGTTTTCTTTATTTTAGTTAATATCCACAATAGAGATGAATGTGGAGGTTTGATTGAGTTAAGTTTGTTTTGTTTTGTTTTTCTTCTTTCCTGGGTTTTAATTATTGATAAACCCAAAGGTTTGAATGGATAGATTTGAGTTAGTTAAACACTCCCTTTCATGTGTGAATGCAGTTCTCATTTTACTTGATTGGAGCTCCTTCTTGTAGCTAGCTTCCTTTTTGTGGGCTTGTCTATGTGTATGCCTGTGTGTTCTTTCATTTTTTCTCATTGAAAGTTAGTTTTCTCATTAAAAAAAAGATCCAATACTTAAAGAAGAAAAAACATACGATCCAATACACACCTAGTGAGAAACAAGAGAGATAGTTGGAGGAACTAAGCCTATAAGAGTTTGAACATATAACCTCCTCCCTTGATACAAACTTCGTTTGTGAATATTATATACCTTTTTCTAAAATTAGAATGTTGTATAAGGTTTTCTTATATTGAAAGACATGTCAAACAATGTATATAAAATAATCGGAATAATAATGGAAACGCAGTTATTGACTTATTGTCATGAATCCGTACAACTAATACACTAGTATTTATTAAAGGGAAATCCTTCAGTTCGAATATTGAGAAGGGTGTGTTCATTTTGTCATTTGAAATTTGCAAATCACACTGTCTTCTTACTGGGATAGAAAGAACTTTGTTTGTACCCTTACATTGTGTCGGAAAAGATCTCAGTTTTATTATCAACAAGGAGAAGTGTACAGTCTTAGGGATTAATTTCAATGCTCGGAAGTGGAGGGCTGGGCTCATCTGGTTGGTTCTGAAGTCTTCCATTCTCTTAGATCACCACGGTCTTCCATTTGGTCATAACTCAAGATTCTTTGACTATTTTTTAAACTTGTATGAGGGTTAGTGAAAGAAACTAGTGGAAAGAAATTTCTAACGAGCTTCCTTCTTTCTCTGATCTGATCCCCTTTGTGGTGGGTGATGGGAAGGGAAAACATGGAAGACTCGCTTTGGATAGGCTGACAAGGAAGTTGCCGTGTTTGGTGGGGCTTTTTCATTGTAACTTGTGTTGGAGGGCGGAAGAAGATTTGGAATTCATTTTGGAGTTGTGGCTATGCTTGTTTGGTTTAGGACCACTTCTTCGATGTGTTTGACCTTCAAATAGCTTGCCATAGATCTTTTAGTGTATGATCGAGGAGTTTCTAATCCATATGCTCTTTCAAGGGAAAGGGAGTTTTATTTTTTATTTATTGTATGGAAAGTAGAGGTGTGTGCTTTGTTGTGTGATATTTGAAGGGAAAGAAATAGTAGAGTTTGTAGATGGATTGAGAGGGTGCCTTTTGATGTTGGTCCCTTGTTGAGATTTAATGTCCCCTTTGGGTCTCAGTGACGAGTTTATGTTGTAATTATTTGATGGGTCTTATTTTGCTTAATTAAAGTCACATTCTTTAGGCAGAGTGCTTCTTTTTGTGGGCATTTTTTCGTATGCTCTTGTATTCTGTCATTTTAAACAATGAAAGTTGGTCTTTTATTAAAAGTAAGAAAAATATTAATATTTTCACATTATCCGAACAAAGGCACCTTACTTTCTGACCAACCCTAAGCATTCTCATTGATGAATGGAAATTAGGGGTTTCTTTAGTTATGTTTCCAACTGATCTCAACACATTATAGCAATCTGAGATATGTTTCCAACTGATAACAATGTGGTTGGTGTCTCAGTTAGCAGCTGAATACTCCGAGTGCCCTTCAGGGAAGAAAGGTGGTGACTTAGGATGGTTTCCTCGTGGAAAGATGGCTGGCCCATTTCAAGACGTTGCATTCGCCACTCAAGTTGGAGCGACCAGTGCACCATTCAAGTCAACGTATGTCCTTAATTCTTCAATTTCTTTTATTGTAATCCATTGTTGCCATTGGGTTTACTATTCTGAATTTTCCTTTATGACCATCTACTCTTACTTTTGCTCAATACTGAAAAGCTAAGTAGCACAACCACGGGACACACAAACACCACACGGACATGGCAACATGTCAGTTGGATTATTTTTGCAACACAGTCGAAATTGTGCTGATGTTGTGGATGAGGTATGAATACATCACATAACTCACATATTTCATTTTTGGTTTGGTGAAATGCAGGCATGGGTACCATATTATCTTGTGTGAAGGAAGGAAGAATTAGGAAATCTGACTACATTCGAACAAATCCTAAAATTTGGG

mRNA sequence

AAAAAAAAAACCGGGGAGTTTTAGGGTATAAATTCTCTTAGCTAAGAATCCTTCTCTTTTTATTAGAGACTAACAATCGATGATATCAGTTGGAATCTCTGTGCAATTGAGAATCTAAAGCTTGTAGATGGGGAAAGACTCAAAGGCAAAGGAGGCGGGTGGTAAAGGCAAGGGGAAGGCAAAGCAAGCAGGTTCTGGAGCCGATGAAAGTGCTTCCAAAGGAAAGGGAAAATCCGGAAAAGCTGCTTCCGATGGCCTCGGAACTTGCACTTATGTCAAAGCGAGGCATATACTGTCCGAGAAGCAGGGTAAAATCAATGAAGCCTACAAGAAGTTGCAGGACGGTTGGCTTAGCAATGGAGACAAGGTTCCTCCCGCAGAGTTTGCTAAGTTAGCAGCTGAATACTCCGAGTGCCCTTCAGGGAAGAAAGGTGGTGACTTAGGATGGTTTCCTCGTGGAAAGATGGCTGGCCCATTTCAAGACGTTGCATTCGCCACTCAAGTTGGAGCGACCAGTGCACCATTCAAGTCAACGCATGGGTACCATATTATCTTGTGTGAAGGAAGGAAGAATTAGGAAATCTCAAATCCTAAAATTTGGG

Coding sequence (CDS)

ATGGGGAAAGACTCAAAGGCAAAGGAGGCGGGTGGTAAAGGCAAGGGGAAGGCAAAGCAAGCAGGTTCTGGAGCCGATGAAAGTGCTTCCAAAGGAAAGGGAAAATCCGGAAAAGCTGCTTCCGATGGCCTCGGAACTTGCACTTATGTCAAAGCGAGGCATATACTGTCCGAGAAGCAGGGTAAAATCAATGAAGCCTACAAGAAGTTGCAGGACGGTTGGCTTAGCAATGGAGACAAGGTTCCTCCCGCAGAGTTTGCTAAGTTAGCAGCTGAATACTCCGAGTGCCCTTCAGGGAAGAAAGGTGGTGACTTAGGATGGTTTCCTCGTGGAAAGATGGCTGGCCCATTTCAAGACGTTGCATTCGCCACTCAAGTTGGAGCGACCAGTGCACCATTCAAGTCAACGCATGGGTACCATATTATCTTGTGTGAAGGAAGGAAGAATTAG

Protein sequence

MGKDSKAKEAGGKGKGKAKQAGSGADESASKGKGKSGKAASDGLGTCTYVKARHILSEKQGKINEAYKKLQDGWLSNGDKVPPAEFAKLAAEYSECPSGKKGGDLGWFPRGKMAGPFQDVAFATQVGATSAPFKSTHGYHIILCEGRKN

Homology

[Close]

BLAST of CaUC09G178390 vs. NCBI nr
Match: XP_008465730.1 (PREDICTED: peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 [Cucumis melo] >XP_008465731.1 PREDICTED: peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 [Cucumis melo])

HSP 1 Score: 288.5 bits (737), Expect = 3.3e-74
Identity = 144/149 (96.64%), Postives = 147/149 (98.66%), Query Frame = 0


Query: 1   MGKDSKAKEAGGKGKGKAKQAGSGADESASKGKGKSGKAASDGLGTCTYVKARHILSEKQ 60
           MGKDSK K+AGGKGKGKAKQ GSGADESASKGKGKSGKAA+DGLGTCTYVKARHILSEKQ
Sbjct: 1   MGKDSKPKDAGGKGKGKAKQGGSGADESASKGKGKSGKAAADGLGTCTYVKARHILSEKQ 60

Query: 61  GKINEAYKKLQDGWLSNGDKVPPAEFAKLAAEYSECPSGKKGGDLGWFPRGKMAGPFQDV 120
           GKINEAYKKLQDGWLSNGDKVPPAEFAKLAAEYSECPSGKKGGDLGWFPRGKMAGPFQ+V
Sbjct: 61  GKINEAYKKLQDGWLSNGDKVPPAEFAKLAAEYSECPSGKKGGDLGWFPRGKMAGPFQEV 120

Query: 121 AFATQVGATSAPFKSTHGYHIILCEGRKN 150
           AFATQVGATSAPFKSTHGYHIILCEGRKN
Sbjct: 121 AFATQVGATSAPFKSTHGYHIILCEGRKN 149

[Close]

BLAST of CaUC09G178390 vs. NCBI nr
Match: XP_038890931.1 (peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 [Benincasa hispida])

HSP 1 Score: 287.3 bits (734), Expect = 7.3e-74
Identity = 144/149 (96.64%), Postives = 145/149 (97.32%), Query Frame = 0


Query: 1   MGKDSKAKEAGGKGKGKAKQAGSGADESASKGKGKSGKAASDGLGTCTYVKARHILSEKQ 60
           MGKDSK K+AGGKGKGK KQA SGADESASKGKGKSGKAASDGLGTCTYVKARHILSEKQ
Sbjct: 1   MGKDSKPKDAGGKGKGKGKQASSGADESASKGKGKSGKAASDGLGTCTYVKARHILSEKQ 60

Query: 61  GKINEAYKKLQDGWLSNGDKVPPAEFAKLAAEYSECPSGKKGGDLGWFPRGKMAGPFQDV 120
           GKINE YKKLQDGWLSNGDKVPPAEFAKLAAEYSECPSGKKGGDLGWFPRGKMAGPFQDV
Sbjct: 61  GKINEVYKKLQDGWLSNGDKVPPAEFAKLAAEYSECPSGKKGGDLGWFPRGKMAGPFQDV 120

Query: 121 AFATQVGATSAPFKSTHGYHIILCEGRKN 150
           AFATQVGATSAPFKSTHGYHIILCEGRKN
Sbjct: 121 AFATQVGATSAPFKSTHGYHIILCEGRKN 149

[Close]

BLAST of CaUC09G178390 vs. NCBI nr
Match: XP_022999389.1 (peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 [Cucurbita maxima])

HSP 1 Score: 286.2 bits (731), Expect = 1.6e-73
Identity = 143/149 (95.97%), Postives = 146/149 (97.99%), Query Frame = 0


Query: 1   MGKDSKAKEAGGKGKGKAKQAGSGADESASKGKGKSGKAASDGLGTCTYVKARHILSEKQ 60
           MGKDSKAK+AGGKGKGKAKQA SGADESASKGKGKSGKAASDGLGTCTYVKARHIL EKQ
Sbjct: 1   MGKDSKAKDAGGKGKGKAKQAASGADESASKGKGKSGKAASDGLGTCTYVKARHILCEKQ 60

Query: 61  GKINEAYKKLQDGWLSNGDKVPPAEFAKLAAEYSECPSGKKGGDLGWFPRGKMAGPFQDV 120
           GKINEAYKKLQDGWLSNGDKVPPAEFAKLAAEYSECPSGKKGGDLGWFPRGKMAGPFQDV
Sbjct: 61  GKINEAYKKLQDGWLSNGDKVPPAEFAKLAAEYSECPSGKKGGDLGWFPRGKMAGPFQDV 120

Query: 121 AFATQVGATSAPFKSTHGYHIILCEGRKN 150
           AF+T +GATSAPFKSTHGYHIILCEGRKN
Sbjct: 121 AFSTLIGATSAPFKSTHGYHIILCEGRKN 149

[Close]

BLAST of CaUC09G178390 vs. NCBI nr
Match: XP_011655289.1 (peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 [Cucumis sativus] >KAE8648486.1 hypothetical protein Csa_008057 [Cucumis sativus])

HSP 1 Score: 285.8 bits (730), Expect = 2.1e-73
Identity = 143/149 (95.97%), Postives = 145/149 (97.32%), Query Frame = 0


Query: 1   MGKDSKAKEAGGKGKGKAKQAGSGADESASKGKGKSGKAASDGLGTCTYVKARHILSEKQ 60
           MGKDSK K+AGGKGKGKAKQ  SGADESASKGKGKSGKAASDGLGTCTYVKARHILSEKQ
Sbjct: 1   MGKDSKPKDAGGKGKGKAKQGASGADESASKGKGKSGKAASDGLGTCTYVKARHILSEKQ 60

Query: 61  GKINEAYKKLQDGWLSNGDKVPPAEFAKLAAEYSECPSGKKGGDLGWFPRGKMAGPFQDV 120
           GKINEAYKKLQDGWLSNGDKVPPAEFAKLAAEYSECPSGKKGGDLGWFPRGKMAGPFQ+V
Sbjct: 61  GKINEAYKKLQDGWLSNGDKVPPAEFAKLAAEYSECPSGKKGGDLGWFPRGKMAGPFQEV 120

Query: 121 AFATQVGATSAPFKSTHGYHIILCEGRKN 150
           AFATQVG TSAPFKSTHGYHIILCEGRKN
Sbjct: 121 AFATQVGVTSAPFKSTHGYHIILCEGRKN 149

[Close]

BLAST of CaUC09G178390 vs. NCBI nr
Match: XP_022946573.1 (peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 [Cucurbita moschata] >KAG6599002.1 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 284.6 bits (727), Expect = 4.8e-73
Identity = 142/149 (95.30%), Postives = 145/149 (97.32%), Query Frame = 0


Query: 1   MGKDSKAKEAGGKGKGKAKQAGSGADESASKGKGKSGKAASDGLGTCTYVKARHILSEKQ 60
           MGKDSKAK+AGGKGKGK KQA SGADESASKGKGKSGKAASDGLGTCTYVKARHIL EKQ
Sbjct: 1   MGKDSKAKDAGGKGKGKGKQAASGADESASKGKGKSGKAASDGLGTCTYVKARHILCEKQ 60

Query: 61  GKINEAYKKLQDGWLSNGDKVPPAEFAKLAAEYSECPSGKKGGDLGWFPRGKMAGPFQDV 120
           GKINEAYKKLQDGWLSNGDKVPPAEFAKLAAEYSECPSGKKGGDLGWFPRGKMAGPFQDV
Sbjct: 61  GKINEAYKKLQDGWLSNGDKVPPAEFAKLAAEYSECPSGKKGGDLGWFPRGKMAGPFQDV 120

Query: 121 AFATQVGATSAPFKSTHGYHIILCEGRKN 150
           AF+T +GATSAPFKSTHGYHIILCEGRKN
Sbjct: 121 AFSTLIGATSAPFKSTHGYHIILCEGRKN 149

[Close]

BLAST of CaUC09G178390 vs. ExPASy Swiss-Prot
Match: B5KFL3 (Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 OS=Taeniopygia guttata OX=59729 GN=PIN4 PE=2 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.6e-18
Identity = 61/143 (42.66%), Postives = 78/143 (54.55%), Query Frame = 0


Query: 12  GKGKGKAKQAGSGADESASKGKGKSGKAASDGLGTCTYVKARHILSEKQGKINEAYKKLQ 71
           GKG GKA + G G   S  K +G  G  ++        VK RHIL EK G+  EA +KL+
Sbjct: 5   GKGGGKAGKGGDGGSSSEGKAQGPKGGGSA--------VKVRHILCEKHGRAMEAMEKLK 64

Query: 72  DGWLSNGDKVPPAEFAKLAAEYSECPSGKKGGDLGWFPRGKMAGPFQDVAFATQVGA--- 131
            G            F+++AA+YSE    ++GGDLGW  RG M GPFQ+ AFA  V +   
Sbjct: 65  SG----------QRFSEVAAQYSE-DKARQGGDLGWMTRGSMVGPFQEAAFALPVSSMDK 124

Query: 132 ---TSAPFKSTHGYHIILCEGRK 149
              T  P K+  GYHII+ EGRK
Sbjct: 125 PVYTDPPVKTKFGYHIIMVEGRK 128

[Close]

BLAST of CaUC09G178390 vs. ExPASy Swiss-Prot
Match: Q503Y7 (Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 OS=Danio rerio OX=7955 GN=pin4 PE=2 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 5.9e-18
Identity = 62/142 (43.66%), Postives = 77/142 (54.23%), Query Frame = 0


Query: 13  KGKGKAKQAGSGADESASKGKGKSGKAASDGLGTCTYVKARHILSEKQGKINEAYKKLQD 72
           KGKG     G GA  +A+ G G S K      G  T VK RHIL EK GK  EA +K++ 
Sbjct: 4   KGKG-----GKGAKGAAASGSGDSDKKEKAQKGG-TAVKVRHILCEKHGKCMEAMEKIKS 63

Query: 73  GWLSNGDKVPPAEFAKLAAEYSECPSGKKGGDLGWFPRGKMAGPFQDVAFATQVGA---- 132
           G            F+++AA+YSE    ++GGDLGW  RG M GPFQD AFA  +      
Sbjct: 64  G----------MRFSEVAAQYSE-DKARQGGDLGWMTRGSMVGPFQDAAFALPISTMDKP 123

Query: 133 --TSAPFKSTHGYHIILCEGRK 149
             T  P K+  GYHII+ EG+K
Sbjct: 124 VYTDPPVKTKFGYHIIMVEGKK 128

[Close]

BLAST of CaUC09G178390 vs. ExPASy Swiss-Prot
Match: A6QPY8 (Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 OS=Bos taurus OX=9913 GN=PIN4 PE=2 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.0e-17
Identity = 62/147 (42.18%), Postives = 79/147 (53.74%), Query Frame = 0


Query: 8   KEAGGKGKGKAKQAGSGADESASKGKGKSGKAASDGLGTCTYVKARHILSEKQGKINEAY 67
           K   G GKG   +A SG++ S  K +G  G   +        VK RHIL EK GKI EA 
Sbjct: 4   KGKSGSGKGGKGKAASGSESSEKKAQGPKGGGNA--------VKVRHILCEKHGKILEAM 63

Query: 68  KKLQDGWLSNGDKVPPAEFAKLAAEYSECPSGKKGGDLGWFPRGKMAGPFQDVAFATQVG 127
           +KL+ G           +F ++AA+YSE    ++GGDLGW  RG M GPFQ+ AFA  + 
Sbjct: 64  EKLKSG----------MKFNEVAAQYSE-DKARQGGDLGWMTRGSMVGPFQEAAFALPIS 123

Query: 128 A------TSAPFKSTHGYHIILCEGRK 149
                  T  P K+  GYHII+ EGRK
Sbjct: 124 VLDKPVFTDPPVKTKFGYHIIMVEGRK 131

[Close]

BLAST of CaUC09G178390 vs. ExPASy Swiss-Prot
Match: Q9Y237 (Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 OS=Homo sapiens OX=9606 GN=PIN4 PE=1 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.0e-17
Identity = 62/142 (43.66%), Postives = 76/142 (53.52%), Query Frame = 0


Query: 13  KGKGKAKQAGSGADESASKGKGKSGKAASDGLGTCTYVKARHILSEKQGKINEAYKKLQD 72
           KGK  + +AG G    A+ G   + K A    G    VK RHIL EK GKI EA +KL+ 
Sbjct: 4   KGKSGSGKAGKG---GAASGSDSADKKAQGPKGGGNAVKVRHILCEKHGKIMEAMEKLKS 63

Query: 73  GWLSNGDKVPPAEFAKLAAEYSECPSGKKGGDLGWFPRGKMAGPFQDVAFATQVGA---- 132
           G            F ++AA+YSE    ++GGDLGW  RG M GPFQ+ AFA  V      
Sbjct: 64  G----------MRFNEVAAQYSE-DKARQGGDLGWMTRGSMVGPFQEAAFALPVSGMDKP 123

Query: 133 --TSAPFKSTHGYHIILCEGRK 149
             T  P K+  GYHII+ EGRK
Sbjct: 124 VFTDPPVKTKFGYHIIMVEGRK 131

[Close]

BLAST of CaUC09G178390 vs. ExPASy Swiss-Prot
Match: Q9CWW6 (Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 OS=Mus musculus OX=10090 GN=Pin4 PE=1 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 2.3e-17
Identity = 62/147 (42.18%), Postives = 77/147 (52.38%), Query Frame = 0


Query: 8   KEAGGKGKGKAKQAGSGADESASKGKGKSGKAASDGLGTCTYVKARHILSEKQGKINEAY 67
           K   G GKG    A SG+D +  K +G  G   +        VK RHIL EK GKI EA 
Sbjct: 4   KGKSGSGKGGKGGAASGSDSADKKSQGPKGGGNA--------VKVRHILCEKHGKIMEAM 63

Query: 68  KKLQDGWLSNGDKVPPAEFAKLAAEYSECPSGKKGGDLGWFPRGKMAGPFQDVAFATQVG 127
           +KL+ G            F+++A +YSE    ++GGDLGW  RG M GPFQ+ AFA  V 
Sbjct: 64  EKLKSG----------MRFSEVATQYSE-DKARQGGDLGWMTRGSMVGPFQEAAFALPVS 123

Query: 128 A------TSAPFKSTHGYHIILCEGRK 149
                  T  P K+  GYHII+ EGRK
Sbjct: 124 GMDKPVFTDPPVKTKFGYHIIMVEGRK 131

[Close]

BLAST of CaUC09G178390 vs. ExPASy TrEMBL
Match: A0A1S3CPJ7 (Peptidyl-prolyl cis-trans isomerase OS=Cucumis melo OX=3656 GN=LOC103503344 PE=3 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 1.6e-74
Identity = 144/149 (96.64%), Postives = 147/149 (98.66%), Query Frame = 0


Query: 1   MGKDSKAKEAGGKGKGKAKQAGSGADESASKGKGKSGKAASDGLGTCTYVKARHILSEKQ 60
           MGKDSK K+AGGKGKGKAKQ GSGADESASKGKGKSGKAA+DGLGTCTYVKARHILSEKQ
Sbjct: 1   MGKDSKPKDAGGKGKGKAKQGGSGADESASKGKGKSGKAAADGLGTCTYVKARHILSEKQ 60

Query: 61  GKINEAYKKLQDGWLSNGDKVPPAEFAKLAAEYSECPSGKKGGDLGWFPRGKMAGPFQDV 120
           GKINEAYKKLQDGWLSNGDKVPPAEFAKLAAEYSECPSGKKGGDLGWFPRGKMAGPFQ+V
Sbjct: 61  GKINEAYKKLQDGWLSNGDKVPPAEFAKLAAEYSECPSGKKGGDLGWFPRGKMAGPFQEV 120

Query: 121 AFATQVGATSAPFKSTHGYHIILCEGRKN 150
           AFATQVGATSAPFKSTHGYHIILCEGRKN
Sbjct: 121 AFATQVGATSAPFKSTHGYHIILCEGRKN 149

[Close]

BLAST of CaUC09G178390 vs. ExPASy TrEMBL
Match: A0A6J1KGY7 (Peptidyl-prolyl cis-trans isomerase OS=Cucurbita maxima OX=3661 GN=LOC111493775 PE=3 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 7.9e-74
Identity = 143/149 (95.97%), Postives = 146/149 (97.99%), Query Frame = 0


Query: 1   MGKDSKAKEAGGKGKGKAKQAGSGADESASKGKGKSGKAASDGLGTCTYVKARHILSEKQ 60
           MGKDSKAK+AGGKGKGKAKQA SGADESASKGKGKSGKAASDGLGTCTYVKARHIL EKQ
Sbjct: 1   MGKDSKAKDAGGKGKGKAKQAASGADESASKGKGKSGKAASDGLGTCTYVKARHILCEKQ 60

Query: 61  GKINEAYKKLQDGWLSNGDKVPPAEFAKLAAEYSECPSGKKGGDLGWFPRGKMAGPFQDV 120
           GKINEAYKKLQDGWLSNGDKVPPAEFAKLAAEYSECPSGKKGGDLGWFPRGKMAGPFQDV
Sbjct: 61  GKINEAYKKLQDGWLSNGDKVPPAEFAKLAAEYSECPSGKKGGDLGWFPRGKMAGPFQDV 120

Query: 121 AFATQVGATSAPFKSTHGYHIILCEGRKN 150
           AF+T +GATSAPFKSTHGYHIILCEGRKN
Sbjct: 121 AFSTLIGATSAPFKSTHGYHIILCEGRKN 149

[Close]

BLAST of CaUC09G178390 vs. ExPASy TrEMBL
Match: A0A6J1G492 (Peptidyl-prolyl cis-trans isomerase OS=Cucurbita moschata OX=3662 GN=LOC111450594 PE=3 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 2.3e-73
Identity = 142/149 (95.30%), Postives = 145/149 (97.32%), Query Frame = 0


Query: 1   MGKDSKAKEAGGKGKGKAKQAGSGADESASKGKGKSGKAASDGLGTCTYVKARHILSEKQ 60
           MGKDSKAK+AGGKGKGK KQA SGADESASKGKGKSGKAASDGLGTCTYVKARHIL EKQ
Sbjct: 1   MGKDSKAKDAGGKGKGKGKQAASGADESASKGKGKSGKAASDGLGTCTYVKARHILCEKQ 60

Query: 61  GKINEAYKKLQDGWLSNGDKVPPAEFAKLAAEYSECPSGKKGGDLGWFPRGKMAGPFQDV 120
           GKINEAYKKLQDGWLSNGDKVPPAEFAKLAAEYSECPSGKKGGDLGWFPRGKMAGPFQDV
Sbjct: 61  GKINEAYKKLQDGWLSNGDKVPPAEFAKLAAEYSECPSGKKGGDLGWFPRGKMAGPFQDV 120

Query: 121 AFATQVGATSAPFKSTHGYHIILCEGRKN 150
           AF+T +GATSAPFKSTHGYHIILCEGRKN
Sbjct: 121 AFSTLIGATSAPFKSTHGYHIILCEGRKN 149

[Close]

BLAST of CaUC09G178390 vs. ExPASy TrEMBL
Match: A0A6J1DRP8 (Peptidyl-prolyl cis-trans isomerase OS=Momordica charantia OX=3673 GN=LOC111023231 PE=3 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 2.2e-71
Identity = 138/149 (92.62%), Postives = 143/149 (95.97%), Query Frame = 0


Query: 1   MGKDSKAKEAGGKGKGKAKQAGSGADESASKGKGKSGKAASDGLGTCTYVKARHILSEKQ 60
           MGKDSK K+AGGKGKGKAKQA +GADESASKGKGKSGKAA+DGLGTCTYVKARHIL EKQ
Sbjct: 1   MGKDSKQKDAGGKGKGKAKQAAAGADESASKGKGKSGKAAADGLGTCTYVKARHILCEKQ 60

Query: 61  GKINEAYKKLQDGWLSNGDKVPPAEFAKLAAEYSECPSGKKGGDLGWFPRGKMAGPFQDV 120
           GKI EAYKKLQDGWLSNGDKVPP EFAKLAAEYSECPSGKKGGDLGWFPRGKMAGPFQDV
Sbjct: 61  GKITEAYKKLQDGWLSNGDKVPPPEFAKLAAEYSECPSGKKGGDLGWFPRGKMAGPFQDV 120

Query: 121 AFATQVGATSAPFKSTHGYHIILCEGRKN 150
           AF+T +GATSAPFKSTHGYHIILCEGRKN
Sbjct: 121 AFSTTIGATSAPFKSTHGYHIILCEGRKN 149

[Close]

BLAST of CaUC09G178390 vs. ExPASy TrEMBL
Match: A0A6M2EAG0 (Peptidyl-prolyl cis-trans isomerase OS=Populus davidiana OX=266767 PE=3 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 5.3e-70
Identity = 136/149 (91.28%), Postives = 143/149 (95.97%), Query Frame = 0


Query: 1   MGKDSKAKEAGGKGKGKAKQAGSGADESASKGKGKSGKAASDGLGTCTYVKARHILSEKQ 60
           MGKDSK K+AG KGKGK KQAG G+DE+ASKGKGKSGK ASDGLGTCTYVKARHIL EKQ
Sbjct: 1   MGKDSKQKDAGAKGKGKGKQAGGGSDENASKGKGKSGK-ASDGLGTCTYVKARHILCEKQ 60

Query: 61  GKINEAYKKLQDGWLSNGDKVPPAEFAKLAAEYSECPSGKKGGDLGWFPRGKMAGPFQDV 120
           GKINEAY+KLQDGWLSNGDKVPPAEFAKLA+EYSECPSGKKGGDLGWFPRGKMAGPFQDV
Sbjct: 61  GKINEAYQKLQDGWLSNGDKVPPAEFAKLASEYSECPSGKKGGDLGWFPRGKMAGPFQDV 120

Query: 121 AFATQVGATSAPFKSTHGYHIILCEGRKN 150
           AFATQ+GATSAPFKSTHGYH+ILCEGRKN
Sbjct: 121 AFATQIGATSAPFKSTHGYHVILCEGRKN 148

[Close]

BLAST of CaUC09G178390 vs. TAIR 10
Match: AT1G26550.1 (FKBP-like peptidyl-prolyl cis-trans isomerase family protein )

HSP 1 Score: 244.6 bits (623), Expect = 5.1e-65
Identity = 127/149 (85.23%), Postives = 134/149 (89.93%), Query Frame = 0


Query: 1   MGKDSKAKEAGGKGKGKAKQAGSGADESASKGKGKSGKAASDGLGTCTYVKARHILSEKQ 60
           MGKD+K   AGGKGKGK     SG++E+ SKGKGK+GKAA DGLGTCTYVKARH+L EKQ
Sbjct: 1   MGKDAK---AGGKGKGK---QASGSEEAPSKGKGKAGKAA-DGLGTCTYVKARHVLCEKQ 60

Query: 61  GKINEAYKKLQDGWLSNGDKVPPAEFAKLAAEYSECPSGKKGGDLGWFPRGKMAGPFQDV 120
           GKINEAYKKLQDGWLSNGDKVPPAEFAK+AAEYSECPSGKKGGDLGWFPRGKMAGPFQDV
Sbjct: 61  GKINEAYKKLQDGWLSNGDKVPPAEFAKIAAEYSECPSGKKGGDLGWFPRGKMAGPFQDV 120

Query: 121 AFATQVGATSAPFKSTHGYHIILCEGRKN 150
           AF T VG TSAPFKSTHGYHIIL EGRKN
Sbjct: 121 AFNTPVGVTSAPFKSTHGYHIILSEGRKN 142

[Close]

BLAST of CaUC09G178390 vs. TAIR 10
Match: AT2G18040.1 (peptidylprolyl cis/trans isomerase, NIMA-interacting 1 )

HSP 1 Score: 57.0 bits (136), Expect = 1.5e-08
Identity = 39/109 (35.78%), Postives = 53/109 (48.62%), Query Frame = 0


Query: 50  VKARHILSEKQGKINEAYKKLQDGWL---------------SNGDKVP-PAEFAKLAAEY 109
           VKA HIL + QG   +A  K  +G +                  D V   A F ++A   
Sbjct: 7   VKASHILIKHQGSRRKASWKDPEGKIILTTTREAAVEQLKSIREDIVSGKANFEEVATRV 66

Query: 110 SECPSGKKGGDLGWFPRGKMAGPFQDVAFATQVGATSAPFKSTHGYHII 143
           S+C S K+GGDLG F RG+M  PF++  +A +VG  S    +  G HII
Sbjct: 67  SDCSSAKRGGDLGSFGRGQMQKPFEEATYALKVGDISDIVDTDSGVHII 115

[Close]

BLAST of CaUC09G178390 vs. TAIR 10
Match: AT5G19370.1 (rhodanese-like domain-containing protein / PPIC-type PPIASE domain-containing protein )

HSP 1 Score: 47.8 bits (112), Expect = 9.1e-06
Identity = 36/114 (31.58%), Postives = 54/114 (47.37%), Query Frame = 0


Query: 29  ASKGKGKSGKAASDGLGTCTYVKARHILSEKQGKINEAYKKLQDGWLSNGDKVPPAEFAK 88
           AS   G SG +AS        +  +H+L +      E + +LQ  +L         E + 
Sbjct: 81  ASFSSGSSGSSAS------REILVQHLLVKNNDV--ELFAELQKKFLDG------EEMSD 140

Query: 89  LAAEYSECPSGKKGGDLGWFPRGKMAGPFQDVAFATQVGATSAPFKSTHGYHII 143
           LAAEYS CPS K GG LGW   G+M   F++ AF  ++       ++  G H++
Sbjct: 141 LAAEYSICPSKKDGGILGWVKLGQMVPEFEEAAFKAELNQV-VRCRTQFGLHLL 179

The following BLAST results are available for this feature:

BLAST of CaUC09G178390 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008465730.1	3.3e-74	96.64	PREDICTED: peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 [Cucumis melo]...	[more]
XP_038890931.1	7.3e-74	96.64	peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 [Benincasa hispida]	[more]
XP_022999389.1	1.6e-73	95.97	peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 [Cucurbita maxima]	[more]
XP_011655289.1	2.1e-73	95.97	peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 [Cucumis sativus] >KAE864...	[more]
XP_022946573.1	4.8e-73	95.30	peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 [Cucurbita moschata] >KAG...	[more]

BLAST of CaUC09G178390 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B5KFL3	1.6e-18	42.66	Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 OS=Taeniopygia guttata OX...	[more]
Q503Y7	5.9e-18	43.66	Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 OS=Danio rerio OX=7955 GN...	[more]
A6QPY8	1.0e-17	42.18	Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 OS=Bos taurus OX=9913 GN=...	[more]
Q9Y237	1.0e-17	43.66	Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 OS=Homo sapiens OX=9606 G...	[more]
Q9CWW6	2.3e-17	42.18	Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 OS=Mus musculus OX=10090 ...	[more]

BLAST of CaUC09G178390 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CPJ7	1.6e-74	96.64	Peptidyl-prolyl cis-trans isomerase OS=Cucumis melo OX=3656 GN=LOC103503344 PE=3...	[more]
A0A6J1KGY7	7.9e-74	95.97	Peptidyl-prolyl cis-trans isomerase OS=Cucurbita maxima OX=3661 GN=LOC111493775 ...	[more]
A0A6J1G492	2.3e-73	95.30	Peptidyl-prolyl cis-trans isomerase OS=Cucurbita moschata OX=3662 GN=LOC11145059...	[more]
A0A6J1DRP8	2.2e-71	92.62	Peptidyl-prolyl cis-trans isomerase OS=Momordica charantia OX=3673 GN=LOC1110232...	[more]
A0A6M2EAG0	5.3e-70	91.28	Peptidyl-prolyl cis-trans isomerase OS=Populus davidiana OX=266767 PE=3 SV=1	[more]

BLAST of CaUC09G178390 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G26550.1	5.1e-65	85.23	FKBP-like peptidyl-prolyl cis-trans isomerase family protein	[more]
AT2G18040.1	1.5e-08	35.78	peptidylprolyl cis/trans isomerase, NIMA-interacting 1	[more]
AT5G19370.1	9.1e-06	31.58	rhodanese-like domain-containing protein / PPIC-type PPIASE domain-containing pr...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF13616	Rotamase_3	coord: 50..143 e-value: 4.7E-19 score: 69.1
None	No IPR available	GENE3D	3.10.50.40		coord: 48..147 e-value: 4.7E-32 score: 112.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..43
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15
None	No IPR available	PANTHER	PTHR45995:SF5	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE	coord: 8..149
None	No IPR available	SUPERFAMILY	54534	FKBP-like	coord: 46..145
IPR043323	Peptidyl-prolyl cis-trans isomerase PIN4	PANTHER	PTHR45995	FAMILY NOT NAMED	coord: 8..149
IPR023058	Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site	PROSITE	PS01096	PPIC_PPIASE_1	coord: 86..106
IPR000297	Peptidyl-prolyl cis-trans isomerase, PpiC-type	PROSITE	PS50198	PPIC_PPIASE_2	coord: 47..146 score: 25.049952

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC09G178390.1	CaUC09G178390.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000413	protein peptidyl-prolyl isomerization
biological_process	GO:0006364	rRNA processing
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003755	peptidyl-prolyl cis-trans isomerase activity