CaUC09G177320 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC09G177320
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
LocationCiama_Chr09: 36604090 .. 36604600 (-)
RNA-Seq ExpressionCaUC09G177320
SyntenyCaUC09G177320
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATAAGTAATTTGAAAGTATAGGAATTATGAAATGGGCAATTTTAGAGATTCTAAAGTTATGTTATTTACCATTTATTTGCATAATATAATATTTATTTAACATCAATCTCTATTATTTATATAAAAGTGCGCATTGAAGTTGGAGACCTATGATCGGATAAGAGGGTAAAAAAGGAAAGATGGAGGGCATTCTGGTACTTTCCGGAATTACTTCCGTGTAGCTCTTATCCAAAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAAACCAAAGCAAGAAAACGCGAATCTGGCAGAGCAGAGAGGAGGAAGAAGAAAGAGGAATCGGAAGGCCGTTAGAGCAAAGAAGAAATGGAGCTCCGGCACCGGCGCTAACAATTCTTCCATAGGAGGTGGTAGCTTAAACAATCAAGAACCTGCAAATACTCCCTTGCATTTTCTCTACCATCTCCGGAAACCTCTAAAATCCTTTTTATTTCCTTTCCTTTTTACCTAA

mRNA sequence

ATGATAAATGGAGGGCATTCTGGTACTTTCCGGAATTACTTCCGTGTAGCTCTTATCCAAAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAAACCAAAGCAAGAAAACGCGAATCTGGCAGAGCAGAGAGGAGGAAGAAGAAAGAGGAATCGGAAGGCCGTTAGAGCAAAGAAGAAATGGAGCTCCGGCACCGGCGCTAACAATTCTTCCATAGGAGGTGGTAGCTTAAACAATCAAGAACCTGCAAATACTCCCTTGCATTTTCTCTACCATCTCCGGAAACCTCTAAAATCCTTTTTATTTCCTTTCCTTTTTACCTAA

Coding sequence (CDS)

ATGATAAATGGAGGGCATTCTGGTACTTTCCGGAATTACTTCCGTGTAGCTCTTATCCAAAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAAACCAAAGCAAGAAAACGCGAATCTGGCAGAGCAGAGAGGAGGAAGAAGAAAGAGGAATCGGAAGGCCGTTAGAGCAAAGAAGAAATGGAGCTCCGGCACCGGCGCTAACAATTCTTCCATAGGAGGTGGTAGCTTAAACAATCAAGAACCTGCAAATACTCCCTTGCATTTTCTCTACCATCTCCGGAAACCTCTAAAATCCTTTTTATTTCCTTTCCTTTTTACCTAA

Protein sequence

MINGGHSGTFRNYFRVALIQNNNNNNNNNNNNNNNKPKQENANLAEQRGGRRKRNRKAVRAKKKWSSGTGANNSSIGGGSLNNQEPANTPLHFLYHLRKPLKSFLFPFLFT
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 20..42
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 66..87
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 20..87

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC09G177320.1CaUC09G177320.1mRNA