CaUC09G176550 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC09G176550
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Location	Ciama_Chr09: 35787361 .. 35790603 (-)
RNA-Seq Expression	CaUC09G176550
Synteny	CaUC09G176550

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGTTCCATCGCAGATGGTTAATAATTAGTATGTATCAGTTCTCTCTCTCTCTCTCTCTCTTCATTTTTTTTTCCTTGAATGGCCATAGTTTGATGAGGAAACCAGCATGTGGACTTGTGGAAGGAGAATTACTGTATCAAAACATTGACTTTTCTTGAACTTGATAGAAATGGAGAGCGAAATGAATGCCAAGAAGTAGGGGCTTGGTTTATAGAGAGAACATTCAAAGGTCCAGGTTTAAGCCTAAGTTGATAAACTTAATAATGAAAAAAGAGAGTGAGAAAATTATATATCTATACATATACACATACATACGTCTGGATTCTCATAGACTACTTGAGGTAAGGAGTGGAGTTGTGAAGTCGTAGAGTCCATAGTATAAGGAGTTAATAAAGCATAAAATTAATATTTTTTAGTCGTGGACTCCGTGGGGCTCACGAACTTCTTGGACCAAACAAGGAGTAGAGTTCACAATTCAACTCTCCCAACATACAACTCCTAGGCCAAACACTCCTTGTAATCTTCCTCAAAAAGTTTGTTGATTTAACTACAGTAGCTTCTGTCTGGAGTCCAAGTTATTCAACATTGATGGGCAACTAAAAGGTGGAGGCTTCACTATTCCTTGTCAGCACCCTACTACCTATCAGCCAGGTAATCGCTTTCTTCTTTATTTTCTTATAATAATTTTGGGGAAATGTTCTTCCTGATTCTTCCAAATTTCATGTTTTCTTTCCCTCATATCTCTACCGACTACTTGAAAAATGATTGCACTAAATGACATAACAAAATATCATTTGAAAATTTAAAGTATTGTTTTTATTATTAAAAAAAAAAAAAAAAGGAAGGTACTAGTTTTCATTTTGAGGTGCATAAAACTGAACTTTCAATGATTTGGACAACTTATTATTTGTAACTAAGAATGATATAAATAGACTGTGAGGGTATGTATGGCTCAAAGAGTTCGTGGCCCACAACTAAAAGATATCAAATTTATGACTTATTAACTCCCAATATTGTGGGCTCCAATAATTCACATCTTTCTAGACTTCACAATTTCACTTCTTGCTACAAATGTCCCCTAAACCATTTAAGCACACAATTATTTACCATTAAAAGAAGGCCTTTTGAAGTATTCAATATTGTTTTTTAACTCACTAAAATTACTGAGTTACATAGAGCAAAGTAATGACTTAAAAGCATCTTAAGTCTAACTTACACAATCATTTAAGTTTTTTTTTTCCCTGACAATTCTGTTTGTGAAAGGTTGCAATGCAAGTATATCCATGACTGATAATGTTTCACCAAAGTCAATATTATTTCCCAAGAAGGTTTCTTTTTTGGAGAGTGAATTGGTAACACTTCATTCCTTCTAATGTTTACCTGCTTGTGTTTAAAACTTCAACTTTCCATGGATTTTCTACTTGTACTGAAATTTTGTGTACTCCTTTGATTTTTCTGGCCTAATATAGAATGCAAAGAAACGTGAGTTCTTTGCCCAAAAAGGCCTACAAACAACAACTCCATATGATCTGGCAGGGGATTACAAGAGAATGAAGGTCAGTGCCCAACTTAGCAGACTACTTAAACCTCCATTTGGTAACCATTTCGTTTTTTTTTTTTTTTGCAGGTTTTTGAAAATTATGCTCATTTACTCTCATGTTCATACAACATGGTTTGCATCTTTCTTATGTACAAGAGTTGAATTCAAAGACAAAACTATTTTTTTTAGTTTTCAAAACTTAACTTGATTTTTGAAACATTGGTAAAAAGTAGATAACAAATCAAGAAATCTAGAGTTGTAAGAGGGTGTCCATTGGCTTAATTTTCAAAAAACGAAAAAAAAAAAAAAAAAAAAACGAAATGGTTACCAAACGGGACTTTAGTTTTCAAATTTTGGTTTAGCTTTTGGAAATATAAGTAGAAAGCAGACAACAAACAAAAAATTTAGAGATGAAGTGGATGTTTGTAGGTTTAATTTTCAAAAACTCAAAATCTAAAACAAAATGGTTATCAAACGAAACCTAAATTACTCAAACTAATTTGAAAGATTCAAAAATCAAATACACTTCCTTTTTTACCATTTATGCACTTTCATTTCTCTTGTATTGGAAGTAGTTGCAGGTACCAGTAAGGAGAAGCCAAAGGCTTAGCGATAAAATTACTATCCTTCAAAAGCTGGTTTCCCCTTACGGCAAGGTTCGGTAATTTTTCTTTTATTTGAAAAATTGCGGTTGTGTCCCTAAATTTTGGGTTTAATTTATATTTAGTCCAAAGGTTCAAGTTTTACACTTTTAACTCTAATTTTCACTAAATACTCACTTTAAGCTTTTGGTGTTAATATCTACTTATTAATTTTTTTAAAAATGAAATTAATTATAATTAAATTAGTTTTCACTAATTTCCCACCACTATTAAAGTTACTTAAAACTTTTCACATCATAATTATTTTAAATTAATTAACAGAAAGCTAATGCCAAAAACCAAAGTGAGCATTTATTGAAAACTCGAGGGTAAAAATATAAGATATTAAAAACTAAAGACCAAATGCAAACTAAACTTAAAACTTAGCGTAAATATGTAACATTCTAAGACGAAATTAAACTCAAAACTCAAAGTAAAAGTGTAACATTTTGAAGCATAAGGTTAAAATAAAAACTAGACTCAAAACATAGAGACCATAAAATGAAATATGGAATAGTTCCATTTCTTAAACATTATTATATTTTTGTTAACTTATTGTAGACTGATACTGCATCTGTTCTCCAAGAAGCCTGTCTTTACATCAAATTTGTTCAAGAGCACATTCAGGTACAATTGTTCAAAAGTCTCATTCTTTGACATAATATTTCCTAAAACTGTCAAACTTTATTGCTTAAATATTATTGTTTGTTAAAAGAAAGTGGTTTGAAGCTTGAAATACATACTTTTTTTGTTTCCTGGGTTTGGAGCAGAATCTACTTCAAATGCAGAGTAACTCATATAAAAACCAAAATCCTCAGGTAAAAAACTATAAAAGATCCTCTTTCTTATGGTGAAGTTTCAAGAGGAAGAGAAATTTGTAAAAATTACTCCTCAATTTAAGATGGGTCTGTATGAAACTTCAATTTTTCTACAGGGAATTCAACAGAAGCAAGGAAATCTAAGGAGTGAAGGATTATGTTTGGTTCCTGTGACTTTTACTCAGAAAATAGCCATTAATAATGACATAAATAGGATCCAACCCCATAATTTTAATTGA

mRNA sequence

ATGGATGTTCCATCGCAGATGGTTAATAATTATAGCTTCTGTCTGGAGTCCAAGTTATTCAACATTGATGGGCAACTAAAAGGTGGAGGCTTCACTATTCCTTGTCAGCACCCTACTACCTATCAGCCAGGTTGCAATGCAAGTATATCCATGACTGATAATGTTTCACCAAAGTCAATATTATTTCCCAAGAAGGTTTCTTTTTTGGAGAGTGAATTGAATGCAAAGAAACGTGAGTTCTTTGCCCAAAAAGGCCTACAAACAACAACTCCATATGATCTGGCAGGGGATTACAAGAGAATGAAGTTGCAGGTACCAGTAAGGAGAAGCCAAAGGCTTAGCGATAAAATTACTATCCTTCAAAAGCTGGTTTCCCCTTACGGCAAGACTGATACTGCATCTGTTCTCCAAGAAGCCTGTCTTTACATCAAATTTGTTCAAGAGCACATTCAGAATCTACTTCAAATGCAGAGTAACTCATATAAAAACCAAAATCCTCAGGGAATTCAACAGAAGCAAGGAAATCTAAGGAGTGAAGGATTATGTTTGGTTCCTGTGACTTTTACTCAGAAAATAGCCATTAATAATGACATAAATAGGATCCAACCCCATAATTTTAATTGA

Coding sequence (CDS)

ATGGATGTTCCATCGCAGATGGTTAATAATTATAGCTTCTGTCTGGAGTCCAAGTTATTCAACATTGATGGGCAACTAAAAGGTGGAGGCTTCACTATTCCTTGTCAGCACCCTACTACCTATCAGCCAGGTTGCAATGCAAGTATATCCATGACTGATAATGTTTCACCAAAGTCAATATTATTTCCCAAGAAGGTTTCTTTTTTGGAGAGTGAATTGAATGCAAAGAAACGTGAGTTCTTTGCCCAAAAAGGCCTACAAACAACAACTCCATATGATCTGGCAGGGGATTACAAGAGAATGAAGTTGCAGGTACCAGTAAGGAGAAGCCAAAGGCTTAGCGATAAAATTACTATCCTTCAAAAGCTGGTTTCCCCTTACGGCAAGACTGATACTGCATCTGTTCTCCAAGAAGCCTGTCTTTACATCAAATTTGTTCAAGAGCACATTCAGAATCTACTTCAAATGCAGAGTAACTCATATAAAAACCAAAATCCTCAGGGAATTCAACAGAAGCAAGGAAATCTAAGGAGTGAAGGATTATGTTTGGTTCCTGTGACTTTTACTCAGAAAATAGCCATTAATAATGACATAAATAGGATCCAACCCCATAATTTTAATTGA

Protein sequence

MDVPSQMVNNYSFCLESKLFNIDGQLKGGGFTIPCQHPTTYQPGCNASISMTDNVSPKSILFPKKVSFLESELNAKKREFFAQKGLQTTTPYDLAGDYKRMKLQVPVRRSQRLSDKITILQKLVSPYGKTDTASVLQEACLYIKFVQEHIQNLLQMQSNSYKNQNPQGIQQKQGNLRSEGLCLVPVTFTQKIAINNDINRIQPHNFN

Homology

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BLAST of CaUC09G176550 vs. NCBI nr
Match: XP_022993169.1 (transcription factor bHLH112-like isoform X1 [Cucurbita maxima] >XP_022993170.1 transcription factor bHLH112-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 344.4 bits (882), Expect = 7.0e-91
Identity = 171/201 (85.07%), Postives = 185/201 (92.04%), Query Frame = 0


Query: 1   MDVPSQMVNNYSFCLESKLFNIDGQLKGGGFTIPCQHPTTYQPGCNASISMTDNVSPKSI 60
           MDVPSQ+VNNY FCLESKLFN DGQLKG GFTIPCQHP TYQPGCNAS S ++NVSP+S+
Sbjct: 1   MDVPSQVVNNYGFCLESKLFNNDGQLKGEGFTIPCQHPITYQPGCNASKSRSENVSPQSV 60

Query: 61  LFPKKVSFLESELNAKKREFFAQKGLQTTTPYDLAGDYKRMKLQVPVRRSQRLSDKITIL 120
           LFPKK+SFL++E +AKKREFFAQKG+Q   PYDLAGD KRMKLQ PVRRSQRLSDKIT L
Sbjct: 61  LFPKKISFLQNESHAKKREFFAQKGVQ-AAPYDLAGDNKRMKLQEPVRRSQRLSDKITAL 120

Query: 121 QKLVSPYGKTDTASVLQEACLYIKFVQEHIQNLLQMQSNSYKNQNPQGIQQKQGNLRSEG 180
           QKLVSPYGKTDTASVLQEACLYIKFVQEHIQNLLQMQS+SYKN NPQGIQQKQGNLRSEG
Sbjct: 121 QKLVSPYGKTDTASVLQEACLYIKFVQEHIQNLLQMQSSSYKNLNPQGIQQKQGNLRSEG 180

Query: 181 LCLVPVTFTQKIAINNDINRI 202
           LC+VPVTFTQKIA+N DIN +
Sbjct: 181 LCVVPVTFTQKIALNKDINLV 200

[Close]

BLAST of CaUC09G176550 vs. NCBI nr
Match: XP_023550777.1 (transcription factor bHLH112-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023550778.1 transcription factor bHLH112-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 341.7 bits (875), Expect = 4.6e-90
Identity = 170/201 (84.58%), Postives = 183/201 (91.04%), Query Frame = 0


Query: 1   MDVPSQMVNNYSFCLESKLFNIDGQLKGGGFTIPCQHPTTYQPGCNASISMTDNVSPKSI 60
           MDVPSQ+VNNY FCLESKLFN DGQLKG GFTIPCQHP TYQPGCNAS SMT+NVSP+S+
Sbjct: 1   MDVPSQVVNNYGFCLESKLFNNDGQLKGEGFTIPCQHPLTYQPGCNASKSMTENVSPQSV 60

Query: 61  LFPKKVSFLESELNAKKREFFAQKGLQTTTPYDLAGDYKRMKLQVPVRRSQRLSDKITIL 120
           LF KK+SFL++E +AKKREFFAQKG+Q   PYDLAGD KRMKLQ P RRSQRLSDKIT L
Sbjct: 61  LFTKKISFLQNESHAKKREFFAQKGVQ-AAPYDLAGDNKRMKLQEPARRSQRLSDKITAL 120

Query: 121 QKLVSPYGKTDTASVLQEACLYIKFVQEHIQNLLQMQSNSYKNQNPQGIQQKQGNLRSEG 180
           QKLVSPYGKTDTASVLQEACLYIKFVQEHIQNLLQMQS+SYKN NPQG QQKQGNLRSEG
Sbjct: 121 QKLVSPYGKTDTASVLQEACLYIKFVQEHIQNLLQMQSSSYKNLNPQGTQQKQGNLRSEG 180

Query: 181 LCLVPVTFTQKIAINNDINRI 202
           LC+VPVTFTQKIA+N DIN +
Sbjct: 181 LCVVPVTFTQKIALNKDINLV 200

[Close]

BLAST of CaUC09G176550 vs. NCBI nr
Match: XP_022938584.1 (transcription factor bHLH112-like isoform X1 [Cucurbita moschata] >XP_022938585.1 transcription factor bHLH112-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 336.3 bits (861), Expect = 1.9e-88
Identity = 167/201 (83.08%), Postives = 183/201 (91.04%), Query Frame = 0


Query: 1   MDVPSQMVNNYSFCLESKLFNIDGQLKGGGFTIPCQHPTTYQPGCNASISMTDNVSPKSI 60
           MDVPSQ+VN Y FCLESKLFN DGQLKG GFTIPCQHP TYQPGCNAS SMT+NVSP+S+
Sbjct: 1   MDVPSQVVNYYGFCLESKLFNNDGQLKGEGFTIPCQHPITYQPGCNASNSMTENVSPQSV 60

Query: 61  LFPKKVSFLESELNAKKREFFAQKGLQTTTPYDLAGDYKRMKLQVPVRRSQRLSDKITIL 120
           LFPKK+SF ++E +AKKREFFAQKG+Q   PYDLAGD KRMKLQ PVRRSQRLSDKIT L
Sbjct: 61  LFPKKISFPQNESHAKKREFFAQKGVQ-AAPYDLAGDNKRMKLQEPVRRSQRLSDKITAL 120

Query: 121 QKLVSPYGKTDTASVLQEACLYIKFVQEHIQNLLQMQSNSYKNQNPQGIQQKQGNLRSEG 180
           QKLVSPYGKTDTASVLQEACLYIKFVQEHIQNLLQMQS++YKN NPQG QQ+QGNLRSEG
Sbjct: 121 QKLVSPYGKTDTASVLQEACLYIKFVQEHIQNLLQMQSSAYKNLNPQGTQQRQGNLRSEG 180

Query: 181 LCLVPVTFTQKIAINNDINRI 202
           LC+VPVTFTQKIA++ DIN +
Sbjct: 181 LCVVPVTFTQKIALDKDINLV 200

[Close]

BLAST of CaUC09G176550 vs. NCBI nr
Match: XP_022993172.1 (transcription factor bHLH112-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 335.9 bits (860), Expect = 2.5e-88
Identity = 169/201 (84.08%), Postives = 183/201 (91.04%), Query Frame = 0


Query: 1   MDVPSQMVNNYSFCLESKLFNIDGQLKGGGFTIPCQHPTTYQPGCNASISMTDNVSPKSI 60
           MDVPSQ+VNNY FCLESKLFN DGQLKG GFTIPCQHP TYQPGCNAS S ++NVSP+S+
Sbjct: 1   MDVPSQVVNNYGFCLESKLFNNDGQLKGEGFTIPCQHPITYQPGCNASKSRSENVSPQSV 60

Query: 61  LFPKKVSFLESELNAKKREFFAQKGLQTTTPYDLAGDYKRMKLQVPVRRSQRLSDKITIL 120
           LFPKK+SFL++E +AKKREFFAQKG+Q   PYDLAGD KRMK   PVRRSQRLSDKIT L
Sbjct: 61  LFPKKISFLQNESHAKKREFFAQKGVQ-AAPYDLAGDNKRMK--EPVRRSQRLSDKITAL 120

Query: 121 QKLVSPYGKTDTASVLQEACLYIKFVQEHIQNLLQMQSNSYKNQNPQGIQQKQGNLRSEG 180
           QKLVSPYGKTDTASVLQEACLYIKFVQEHIQNLLQMQS+SYKN NPQGIQQKQGNLRSEG
Sbjct: 121 QKLVSPYGKTDTASVLQEACLYIKFVQEHIQNLLQMQSSSYKNLNPQGIQQKQGNLRSEG 180

Query: 181 LCLVPVTFTQKIAINNDINRI 202
           LC+VPVTFTQKIA+N DIN +
Sbjct: 181 LCVVPVTFTQKIALNKDINLV 198

[Close]

BLAST of CaUC09G176550 vs. NCBI nr
Match: XP_038890859.1 (transcription factor bHLH112-like isoform X2 [Benincasa hispida])

HSP 1 Score: 334.0 bits (855), Expect = 9.5e-88
Identity = 170/199 (85.43%), Postives = 180/199 (90.45%), Query Frame = 0


Query: 1   MDVPSQMVNNYSFCLESKLFNIDGQ--LKGGGFTIPCQHPTTYQPGCNASISMTDNVSPK 60
           MDVPSQMVNNY  CLESKLFN DGQ  LKGGGFTIPCQHP TYQPGCNASIS +DN+SP+
Sbjct: 1   MDVPSQMVNNYGLCLESKLFNNDGQLKLKGGGFTIPCQHPFTYQPGCNASISTSDNISPQ 60

Query: 61  SILFPKKVSFLESELNAKKREFFAQKGLQTTTPYDLAGDYKRMKLQVPVRRSQRLSDKIT 120
           SILFPKKVS +ES+LNAKK E F QKGLQ T PYDLAGDYKRMKLQVPVRRSQRLSDK+T
Sbjct: 61  SILFPKKVSSMESDLNAKKHELFTQKGLQ-TAPYDLAGDYKRMKLQVPVRRSQRLSDKVT 120

Query: 121 ILQKLVSPYGKTDTASVLQEACLYIKFVQEHIQNLLQMQSNSYKNQNPQGIQQKQGNLRS 180
            LQKLVSP+GKTDTASVLQEACLYIKFVQEHIQNLLQMQS+SYK+Q P+ IQQKQ NLRS
Sbjct: 121 ALQKLVSPFGKTDTASVLQEACLYIKFVQEHIQNLLQMQSSSYKSQIPEEIQQKQRNLRS 180

Query: 181 EGLCLVPVTFTQKIAINND 198
           EGLCLVPVT TQKIAIN D
Sbjct: 181 EGLCLVPVTLTQKIAINKD 198

[Close]

BLAST of CaUC09G176550 vs. ExPASy Swiss-Prot
Match: Q7XJU1 (Transcription factor bHLH154 OS=Arabidopsis thaliana OX=3702 GN=BHLH154 PE=1 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.3e-12
Identity = 41/90 (45.56%), Postives = 61/90 (67.78%), Query Frame = 0


Query: 109 RSQRLSDKITILQKLVSPYGKTDTASVLQEACLYIKFVQEHIQNLLQMQSNSYKNQNPQG 168
           R  +L+++I+ LQ+LVSPYGKTDTASVL E   YI+F+QE ++ L    S  Y    P  
Sbjct: 41  RKDKLAERISALQQLVSPYGKTDTASVLLEGMQYIQFLQEQVKVL----SAPYLQATPST 100

Query: 169 IQQ--KQGNLRSEGLCLVPVTFTQKIAINN 197
            ++  ++ +LRS+GLCLVP+ +T ++A  N
Sbjct: 101 TEEEVEEYSLRSKGLCLVPLEYTSEVAQTN 126

[Close]

BLAST of CaUC09G176550 vs. ExPASy Swiss-Prot
Match: Q9FYJ6 (Transcription factor bHLH111 OS=Arabidopsis thaliana OX=3702 GN=BHLH111 PE=2 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.5e-11
Identity = 42/87 (48.28%), Postives = 56/87 (64.37%), Query Frame = 0


Query: 112 RLSDKITILQKLVSPYGKTDTASVLQEACLYIKFVQEHIQNLLQMQSNSYKNQNPQG--- 171
           +L DKIT LQ++VSP+GKTDTASVLQEA  YI F QE ++ L      +   ++P G   
Sbjct: 210 KLRDKITTLQQIVSPFGKTDTASVLQEAITYINFYQEQVKLLSTPYMKNSSMKDPWGGWD 269

Query: 172 --IQQKQG----NLRSEGLCLVPVTFT 190
                K+G    +LRS GLCLVP+++T
Sbjct: 270 REDHNKRGPKHLDLRSRGLCLVPISYT 296

[Close]

BLAST of CaUC09G176550 vs. ExPASy Swiss-Prot
Match: Q9SFZ3 (Transcription factor bHLH110 OS=Arabidopsis thaliana OX=3702 GN=BHLH110 PE=2 SV=2)

HSP 1 Score: 70.9 bits (172), Expect = 2.0e-11
Identity = 40/89 (44.94%), Postives = 57/89 (64.04%), Query Frame = 0


Query: 109 RSQRLSDKITILQKLVSPYGKTDTASVLQEACLYIKFVQEHIQNLLQMQSNSYKN----- 168
           R ++L D+I  LQ+LVSP+GKTDTASVL EA  YIKF+Q  I+ L      + +N     
Sbjct: 334 RKEKLGDRIAALQQLVSPFGKTDTASVLMEAIGYIKFLQSQIETLSVPYMRASRNRPGKA 393

Query: 169 -----QNPQGIQQKQGNLRSEGLCLVPVT 188
                Q+ +G +++  +LRS GLCLVP++
Sbjct: 394 SQLVSQSQEGDEEETRDLRSRGLCLVPLS 422

[Close]

BLAST of CaUC09G176550 vs. ExPASy Swiss-Prot
Match: Q94JL3 (Transcription factor bHLH112 OS=Arabidopsis thaliana OX=3702 GN=BHLH112 PE=1 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 3.4e-11
Identity = 55/166 (33.13%), Postives = 81/166 (48.80%), Query Frame = 0


Query: 46  NASISMTDNVSPKSILFPKKVSFLESELNAKKREFFAQ-KGLQTTTPYDLAGDYKRMKLQ 105
           ++S +  +N +P + +   ++     E   K  +  AQ + L+     + A    R+   
Sbjct: 214 SSSTTNLNNTTPSNFVTTPQIISTRLEDKTKNLKTRAQSESLKRAKDNESAAKKPRVTTP 273

Query: 106 VPVR----RSQRLSDKITILQKLVSPYGKTDTASVLQEACLYIKFVQEHIQNLLQMQSNS 165
            P+     R + L D+IT LQ+LVSP+GKTDTASVLQEA  YIKF+ + +  L    S  
Sbjct: 274 SPLPTFKVRKENLRDQITSLQQLVSPFGKTDTASVLQEAIEYIKFLHDQVTVL----STP 333

Query: 166 YKNQNPQGIQQKQ-------------GNLRSEGLCLVPVTFTQKIA 194
           Y  Q     QQ+Q               LR  GLCLVP++ T  +A
Sbjct: 334 YMKQGASNQQQQQISGKSKSQDENENHELRGHGLCLVPISSTFPVA 375

[Close]

BLAST of CaUC09G176550 vs. ExPASy Swiss-Prot
Match: Q9M0X8 (Transcription factor bHLH114 OS=Arabidopsis thaliana OX=3702 GN=BHLH114 PE=2 SV=2)

HSP 1 Score: 69.7 bits (169), Expect = 4.4e-11
Identity = 44/103 (42.72%), Postives = 63/103 (61.17%), Query Frame = 0


Query: 109 RSQRLSDKITILQKLVSPYGKTDTASVLQEACLYIKFVQEHI-------QNLL----QMQ 168
           R ++L D+IT LQ+LVSP+GKTDTASVL EA  YIKF+QE +       QN +    Q Q
Sbjct: 175 RKEKLGDRITALQQLVSPFGKTDTASVLNEAVEYIKFLQEQVTVLSNPEQNTIGSVQQQQ 234

Query: 169 SNSYKNQNPQG-------IQQKQGNLRSEGLCLVPVTFTQKIA 194
            ++ K+ N QG         ++  +L S GLCL+P++ +  +A
Sbjct: 235 CSNKKSINTQGEVEEDECSPRRYVDLSSRGLCLMPISASYPVA 277

[Close]

BLAST of CaUC09G176550 vs. ExPASy TrEMBL
Match: A0A6J1JZG5 (transcription factor bHLH112-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489269 PE=4 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 3.4e-91
Identity = 171/201 (85.07%), Postives = 185/201 (92.04%), Query Frame = 0


Query: 1   MDVPSQMVNNYSFCLESKLFNIDGQLKGGGFTIPCQHPTTYQPGCNASISMTDNVSPKSI 60
           MDVPSQ+VNNY FCLESKLFN DGQLKG GFTIPCQHP TYQPGCNAS S ++NVSP+S+
Sbjct: 1   MDVPSQVVNNYGFCLESKLFNNDGQLKGEGFTIPCQHPITYQPGCNASKSRSENVSPQSV 60

Query: 61  LFPKKVSFLESELNAKKREFFAQKGLQTTTPYDLAGDYKRMKLQVPVRRSQRLSDKITIL 120
           LFPKK+SFL++E +AKKREFFAQKG+Q   PYDLAGD KRMKLQ PVRRSQRLSDKIT L
Sbjct: 61  LFPKKISFLQNESHAKKREFFAQKGVQ-AAPYDLAGDNKRMKLQEPVRRSQRLSDKITAL 120

Query: 121 QKLVSPYGKTDTASVLQEACLYIKFVQEHIQNLLQMQSNSYKNQNPQGIQQKQGNLRSEG 180
           QKLVSPYGKTDTASVLQEACLYIKFVQEHIQNLLQMQS+SYKN NPQGIQQKQGNLRSEG
Sbjct: 121 QKLVSPYGKTDTASVLQEACLYIKFVQEHIQNLLQMQSSSYKNLNPQGIQQKQGNLRSEG 180

Query: 181 LCLVPVTFTQKIAINNDINRI 202
           LC+VPVTFTQKIA+N DIN +
Sbjct: 181 LCVVPVTFTQKIALNKDINLV 200

[Close]

BLAST of CaUC09G176550 vs. ExPASy TrEMBL
Match: A0A6J1FEH8 (transcription factor bHLH112-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111444774 PE=4 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 9.3e-89
Identity = 167/201 (83.08%), Postives = 183/201 (91.04%), Query Frame = 0


Query: 1   MDVPSQMVNNYSFCLESKLFNIDGQLKGGGFTIPCQHPTTYQPGCNASISMTDNVSPKSI 60
           MDVPSQ+VN Y FCLESKLFN DGQLKG GFTIPCQHP TYQPGCNAS SMT+NVSP+S+
Sbjct: 1   MDVPSQVVNYYGFCLESKLFNNDGQLKGEGFTIPCQHPITYQPGCNASNSMTENVSPQSV 60

Query: 61  LFPKKVSFLESELNAKKREFFAQKGLQTTTPYDLAGDYKRMKLQVPVRRSQRLSDKITIL 120
           LFPKK+SF ++E +AKKREFFAQKG+Q   PYDLAGD KRMKLQ PVRRSQRLSDKIT L
Sbjct: 61  LFPKKISFPQNESHAKKREFFAQKGVQ-AAPYDLAGDNKRMKLQEPVRRSQRLSDKITAL 120

Query: 121 QKLVSPYGKTDTASVLQEACLYIKFVQEHIQNLLQMQSNSYKNQNPQGIQQKQGNLRSEG 180
           QKLVSPYGKTDTASVLQEACLYIKFVQEHIQNLLQMQS++YKN NPQG QQ+QGNLRSEG
Sbjct: 121 QKLVSPYGKTDTASVLQEACLYIKFVQEHIQNLLQMQSSAYKNLNPQGTQQRQGNLRSEG 180

Query: 181 LCLVPVTFTQKIAINNDINRI 202
           LC+VPVTFTQKIA++ DIN +
Sbjct: 181 LCVVPVTFTQKIALDKDINLV 200

[Close]

BLAST of CaUC09G176550 vs. ExPASy TrEMBL
Match: A0A6J1JS15 (transcription factor bHLH112-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111489269 PE=4 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 1.2e-88
Identity = 169/201 (84.08%), Postives = 183/201 (91.04%), Query Frame = 0


Query: 1   MDVPSQMVNNYSFCLESKLFNIDGQLKGGGFTIPCQHPTTYQPGCNASISMTDNVSPKSI 60
           MDVPSQ+VNNY FCLESKLFN DGQLKG GFTIPCQHP TYQPGCNAS S ++NVSP+S+
Sbjct: 1   MDVPSQVVNNYGFCLESKLFNNDGQLKGEGFTIPCQHPITYQPGCNASKSRSENVSPQSV 60

Query: 61  LFPKKVSFLESELNAKKREFFAQKGLQTTTPYDLAGDYKRMKLQVPVRRSQRLSDKITIL 120
           LFPKK+SFL++E +AKKREFFAQKG+Q   PYDLAGD KRMK   PVRRSQRLSDKIT L
Sbjct: 61  LFPKKISFLQNESHAKKREFFAQKGVQ-AAPYDLAGDNKRMK--EPVRRSQRLSDKITAL 120

Query: 121 QKLVSPYGKTDTASVLQEACLYIKFVQEHIQNLLQMQSNSYKNQNPQGIQQKQGNLRSEG 180
           QKLVSPYGKTDTASVLQEACLYIKFVQEHIQNLLQMQS+SYKN NPQGIQQKQGNLRSEG
Sbjct: 121 QKLVSPYGKTDTASVLQEACLYIKFVQEHIQNLLQMQSSSYKNLNPQGIQQKQGNLRSEG 180

Query: 181 LCLVPVTFTQKIAINNDINRI 202
           LC+VPVTFTQKIA+N DIN +
Sbjct: 181 LCVVPVTFTQKIALNKDINLV 198

[Close]

BLAST of CaUC09G176550 vs. ExPASy TrEMBL
Match: A0A6J1FDK1 (transcription factor bHLH112-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111444774 PE=4 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 3.3e-86
Identity = 165/201 (82.09%), Postives = 181/201 (90.05%), Query Frame = 0


Query: 1   MDVPSQMVNNYSFCLESKLFNIDGQLKGGGFTIPCQHPTTYQPGCNASISMTDNVSPKSI 60
           MDVPSQ+VN Y FCLESKLFN DGQLKG GFTIPCQHP TYQPGCNAS SMT+NVSP+S+
Sbjct: 1   MDVPSQVVNYYGFCLESKLFNNDGQLKGEGFTIPCQHPITYQPGCNASNSMTENVSPQSV 60

Query: 61  LFPKKVSFLESELNAKKREFFAQKGLQTTTPYDLAGDYKRMKLQVPVRRSQRLSDKITIL 120
           LFPKK+SF ++E +AKKREFFAQKG+Q   PYDLAGD KRMK   PVRRSQRLSDKIT L
Sbjct: 61  LFPKKISFPQNESHAKKREFFAQKGVQ-AAPYDLAGDNKRMK--EPVRRSQRLSDKITAL 120

Query: 121 QKLVSPYGKTDTASVLQEACLYIKFVQEHIQNLLQMQSNSYKNQNPQGIQQKQGNLRSEG 180
           QKLVSPYGKTDTASVLQEACLYIKFVQEHIQNLLQMQS++YKN NPQG QQ+QGNLRSEG
Sbjct: 121 QKLVSPYGKTDTASVLQEACLYIKFVQEHIQNLLQMQSSAYKNLNPQGTQQRQGNLRSEG 180

Query: 181 LCLVPVTFTQKIAINNDINRI 202
           LC+VPVTFTQKIA++ DIN +
Sbjct: 181 LCVVPVTFTQKIALDKDINLV 198

[Close]

BLAST of CaUC09G176550 vs. ExPASy TrEMBL
Match: A0A6J1C1Y0 (transcription factor bHLH112-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111006672 PE=4 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 2.4e-73
Identity = 155/217 (71.43%), Postives = 171/217 (78.80%), Query Frame = 0


Query: 1   MDVPSQMVNNYSFCLESKLFNIDGQLKGGGFTIPCQHPTTYQPGCNASISMTDNVSPKSI 60
           MDVPSQ  NNY+FCLESKLFN DGQLK GGFTIPCQ P +YQPGC+ASISM D+VS +SI
Sbjct: 1   MDVPSQKANNYAFCLESKLFNNDGQLKDGGFTIPCQRPISYQPGCSASISMADSVSFQSI 60

Query: 61  LFPKKVSFLESELNAKKREFFAQKGLQTTTPYDLAGDYKRMK------------------ 120
           LFPKKVSFL++E NAKKREFFAQKGL+ T+P D+AGD KRMK                  
Sbjct: 61  LFPKKVSFLQNESNAKKREFFAQKGLR-TSPGDVAGDNKRMKVNALEQGLRYLNQQEPSG 120

Query: 121 -----LQVPVRRSQRLSDKITILQKLVSPYGKTDTASVLQEACLYIKFVQEHIQNLLQMQ 180
                LQ P R+SQRLSDKIT LQKLVSPYGKTDTASVLQEACLYIK VQEHIQNLLQ+Q
Sbjct: 121 IHDSRLQEPARKSQRLSDKITALQKLVSPYGKTDTASVLQEACLYIKLVQEHIQNLLQLQ 180

Query: 181 SNSYKNQNPQGIQQKQGNLRSEGLCLVPVTFTQKIAI 195
           S SYK+   +GI+QK+  LRSEGLCLVPVTFTQKI I
Sbjct: 181 SCSYKSL--KGIRQKEEGLRSEGLCLVPVTFTQKIPI 214

[Close]

BLAST of CaUC09G176550 vs. TAIR 10
Match: AT2G31730.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 73.9 bits (180), Expect = 1.6e-13
Identity = 41/90 (45.56%), Postives = 61/90 (67.78%), Query Frame = 0


Query: 109 RSQRLSDKITILQKLVSPYGKTDTASVLQEACLYIKFVQEHIQNLLQMQSNSYKNQNPQG 168
           R  +L+++I+ LQ+LVSPYGKTDTASVL E   YI+F+QE ++ L    S  Y    P  
Sbjct: 41  RKDKLAERISALQQLVSPYGKTDTASVLLEGMQYIQFLQEQVKVL----SAPYLQATPST 100

Query: 169 IQQ--KQGNLRSEGLCLVPVTFTQKIAINN 197
            ++  ++ +LRS+GLCLVP+ +T ++A  N
Sbjct: 101 TEEEVEEYSLRSKGLCLVPLEYTSEVAQTN 126

[Close]

BLAST of CaUC09G176550 vs. TAIR 10
Match: AT1G31050.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 71.2 bits (173), Expect = 1.1e-12
Identity = 42/87 (48.28%), Postives = 56/87 (64.37%), Query Frame = 0


Query: 112 RLSDKITILQKLVSPYGKTDTASVLQEACLYIKFVQEHIQNLLQMQSNSYKNQNPQG--- 171
           +L DKIT LQ++VSP+GKTDTASVLQEA  YI F QE ++ L      +   ++P G   
Sbjct: 325 KLRDKITTLQQIVSPFGKTDTASVLQEAITYINFYQEQVKLLSTPYMKNSSMKDPWGGWD 384

Query: 172 --IQQKQG----NLRSEGLCLVPVTFT 190
                K+G    +LRS GLCLVP+++T
Sbjct: 385 REDHNKRGPKHLDLRSRGLCLVPISYT 411

[Close]

BLAST of CaUC09G176550 vs. TAIR 10
Match: AT1G49830.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 71.2 bits (173), Expect = 1.1e-12
Identity = 46/108 (42.59%), Postives = 59/108 (54.63%), Query Frame = 0


Query: 97  DYKRMKLQVPVRRSQRLSDKITILQKLVSPYGKTDTASVLQEACLYIKFVQEHIQNLLQM 156
           D K+  L     + +++ +KIT LQ LVSPYGKTD ASVL E   YIKF+Q+ +Q L   
Sbjct: 114 DQKKSSLGNAKVKKEKVGEKITTLQHLVSPYGKTDAASVLHETMGYIKFLQDQVQVL--- 173

Query: 157 QSNSYKNQNPQGIQ--------QKQGNLRSEGLCLVPVTFTQKIAINN 197
            S  Y   NP   +         K   LRS GLCLVP+ +T  +A  N
Sbjct: 174 -STPYFKHNPLDDEDTGEVNPTMKVKELRSNGLCLVPLAWTVHVANTN 217

[Close]

BLAST of CaUC09G176550 vs. TAIR 10
Match: AT1G27660.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 70.9 bits (172), Expect = 1.4e-12
Identity = 40/89 (44.94%), Postives = 57/89 (64.04%), Query Frame = 0


Query: 109 RSQRLSDKITILQKLVSPYGKTDTASVLQEACLYIKFVQEHIQNLLQMQSNSYKN----- 168
           R ++L D+I  LQ+LVSP+GKTDTASVL EA  YIKF+Q  I+ L      + +N     
Sbjct: 334 RKEKLGDRIAALQQLVSPFGKTDTASVLMEAIGYIKFLQSQIETLSVPYMRASRNRPGKA 393

Query: 169 -----QNPQGIQQKQGNLRSEGLCLVPVT 188
                Q+ +G +++  +LRS GLCLVP++
Sbjct: 394 SQLVSQSQEGDEEETRDLRSRGLCLVPLS 422

[Close]

BLAST of CaUC09G176550 vs. TAIR 10
Match: AT1G61660.3 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 70.5 bits (171), Expect = 1.8e-12
Identity = 53/165 (32.12%), Postives = 81/165 (49.09%), Query Frame = 0


Query: 46  NASISMTDNVSPKSILFPKKVSFLESELNAKKREFFAQKGLQTTTPYDLAGDYKRMKLQV 105
           ++S +  +N +P + +   ++  + + L  K +     + L+     + A    R+    
Sbjct: 214 SSSTTNLNNTTPSNFVTTPQI--ISTRLEDKTKTRAQSESLKRAKDNESAAKKPRVTTPS 273

Query: 106 PVR----RSQRLSDKITILQKLVSPYGKTDTASVLQEACLYIKFVQEHIQNLLQMQSNSY 165
           P+     R + L D+IT LQ+LVSP+GKTDTASVLQEA  YIKF+ + +  L    S  Y
Sbjct: 274 PLPTFKVRKENLRDQITSLQQLVSPFGKTDTASVLQEAIEYIKFLHDQVTVL----STPY 333

Query: 166 KNQNPQGIQQKQ-------------GNLRSEGLCLVPVTFTQKIA 194
             Q     QQ+Q               LR  GLCLVP++ T  +A
Sbjct: 334 MKQGASNQQQQQISGKSKSQDENENHELRGHGLCLVPISSTFPVA 372

The following BLAST results are available for this feature:

BLAST of CaUC09G176550 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022993169.1	7.0e-91	85.07	transcription factor bHLH112-like isoform X1 [Cucurbita maxima] >XP_022993170.1 ...	[more]
XP_023550777.1	4.6e-90	84.58	transcription factor bHLH112-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_02...	[more]
XP_022938584.1	1.9e-88	83.08	transcription factor bHLH112-like isoform X1 [Cucurbita moschata] >XP_022938585....	[more]
XP_022993172.1	2.5e-88	84.08	transcription factor bHLH112-like isoform X2 [Cucurbita maxima]	[more]
XP_038890859.1	9.5e-88	85.43	transcription factor bHLH112-like isoform X2 [Benincasa hispida]	[more]

BLAST of CaUC09G176550 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7XJU1	2.3e-12	45.56	Transcription factor bHLH154 OS=Arabidopsis thaliana OX=3702 GN=BHLH154 PE=1 SV=...	[more]
Q9FYJ6	1.5e-11	48.28	Transcription factor bHLH111 OS=Arabidopsis thaliana OX=3702 GN=BHLH111 PE=2 SV=...	[more]
Q9SFZ3	2.0e-11	44.94	Transcription factor bHLH110 OS=Arabidopsis thaliana OX=3702 GN=BHLH110 PE=2 SV=...	[more]
Q94JL3	3.4e-11	33.13	Transcription factor bHLH112 OS=Arabidopsis thaliana OX=3702 GN=BHLH112 PE=1 SV=...	[more]
Q9M0X8	4.4e-11	42.72	Transcription factor bHLH114 OS=Arabidopsis thaliana OX=3702 GN=BHLH114 PE=2 SV=...	[more]

BLAST of CaUC09G176550 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JZG5	3.4e-91	85.07	transcription factor bHLH112-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1FEH8	9.3e-89	83.08	transcription factor bHLH112-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1JS15	1.2e-88	84.08	transcription factor bHLH112-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1FDK1	3.3e-86	82.09	transcription factor bHLH112-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1C1Y0	2.4e-73	71.43	transcription factor bHLH112-like isoform X2 OS=Momordica charantia OX=3673 GN=L...	[more]

BLAST of CaUC09G176550 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G31730.1	1.6e-13	45.56	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G31050.1	1.1e-12	48.28	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G49830.1	1.1e-12	42.59	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G27660.1	1.4e-12	44.94	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G61660.3	1.8e-12	32.12	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 102..172 e-value: 4.0E-7 score: 32.1
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 108..156
None	No IPR available	PANTHER	PTHR16223:SF138	TRANSCRIPTION FACTOR BHLH112	coord: 69..195
None	No IPR available	PANTHER	PTHR16223	TRANSCRIPTION FACTOR BHLH83-RELATED	coord: 69..195
None	No IPR available	CDD	cd11393	bHLH_AtbHLH_like	coord: 108..153 e-value: 3.28735E-16 score: 67.5915
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 97..146 score: 10.854883

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC09G176550.1	CaUC09G176550.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity