CaUC09G176330 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC09G176330
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionPhorbol-ester/DAG-type domain-containing protein
LocationCiama_Chr09: 35578763 .. 35579279 (+)
RNA-Seq ExpressionCaUC09G176330
SyntenyCaUC09G176330
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCAAGTGTTGAGAAATTTCATCCGAATTCATACGCATTTGAATGGAAAAAGATGGAGGAAAAAAAATACTTTATAAACCAAACTACTAATTCTGAAATATATATGAGCTTCTTGTTTTGATTTCCCCCACAACCACCCAAAATCAAACTAATTTGTATTAGTTTAGAGAGAGAGAGAGATCAATGTCGATAGGGCCCACGAAGAATAATATTCTTAGTAATCATCCAAGTCATCCATGGCATGTACTAGAGCTCAAAAACTACATGGAACCATACACTTGCGATGGGTGCAAGGAAAAAGGGTTCGGGCCACGGTACCGATGTGACCTCCACGAAGCCGTTTCACATGACTACTTCCCGGGTTCCAAGTTGAGTTTGCTTAGAAAACCACCAAAACCGTGGCTTGGTTAGGAAGATGACTTGGATGGAAGACGTGAAGTTCAATCTTCAGAGGAAGGTGAGTGGGACATGCATGTGGTGCAATAGGAAGAGCCTTAAAGATCGATGGAGGTAA

mRNA sequence

ATGGCCAAAGAGAGAGAGAGATCAATGTCGATAGGGCCCACGAAGAATAATATTCTTAGTAATCATCCAAGTCATCCATGGCATGTACTAGAGCTCAAAAACTACATGGAACCATACACTTGCGATGGGTGCAAGGAAAAAGGGTTCGGGCCACGGTACCGATGTGACCTCCACGAAGCCGTTTCACATGACTACTTCCCGGAAAACCACCAAAACCGTGGCTTGGTTAGGAAGATGACTTGGATGGAAGACGTGAAGTTCAATCTTCAGAGGAAGGTGAGTGGGACATGCATGTGGTGCAATAGGAAGAGCCTTAAAGATCGATGGAGGTAA

Coding sequence (CDS)

ATGGCCAAAGAGAGAGAGAGATCAATGTCGATAGGGCCCACGAAGAATAATATTCTTAGTAATCATCCAAGTCATCCATGGCATGTACTAGAGCTCAAAAACTACATGGAACCATACACTTGCGATGGGTGCAAGGAAAAAGGGTTCGGGCCACGGTACCGATGTGACCTCCACGAAGCCGTTTCACATGACTACTTCCCGGAAAACCACCAAAACCGTGGCTTGGTTAGGAAGATGACTTGGATGGAAGACGTGAAGTTCAATCTTCAGAGGAAGGTGAGTGGGACATGCATGTGGTGCAATAGGAAGAGCCTTAAAGATCGATGGAGGTAA

Protein sequence

MAKERERSMSIGPTKNNILSNHPSHPWHVLELKNYMEPYTCDGCKEKGFGPRYRCDLHEAVSHDYFPENHQNRGLVRKMTWMEDVKFNLQRKVSGTCMWCNRKSLKDRWR
Homology
BLAST of CaUC09G176330 vs. NCBI nr
Match: XP_038889227.1 (uncharacterized protein LOC120079117 [Benincasa hispida])

HSP 1 Score: 130.6 bits (327), Expect = 8.5e-27
Identity = 74/153 (48.37%), Postives = 81/153 (52.94%), Query Frame = 0

Query: 9   MSIGPTKNNILSNHPSHPWHVLELKNYMEPYTCDGCKEKGFGPRYRC-----DLHEA--- 68
           MSI P    IL NHPSHPWHVLELKNYMEPYTCDGCKEKGFGPRYRC     DLH+A   
Sbjct: 1   MSIRP--EIILRNHPSHPWHVLELKNYMEPYTCDGCKEKGFGPRYRCEKCDFDLHQACTY 60

Query: 69  -----VSHDYFP-----------------------------------------ENHQNRG 108
                VSHDYFP                                         + H    
Sbjct: 61  NRIASVSHDYFPGSKFRFLRNPPKPCHPECIIRCDACRKTIKGFVFHCEEDNLDLHPCCR 120

BLAST of CaUC09G176330 vs. NCBI nr
Match: XP_004142836.1 (uncharacterized protein LOC101213594 [Cucumis sativus] >KAE8648542.1 hypothetical protein Csa_009095 [Cucumis sativus])

HSP 1 Score: 117.1 bits (292), Expect = 9.7e-23
Identity = 66/153 (43.14%), Postives = 78/153 (50.98%), Query Frame = 0

Query: 9   MSIGPTKNNILSNHPSHPWHVLELKNYMEPYTCDGCKEKGFGPRYRCD-----LHEAV-- 68
           MSI P    +L NHPSHPWH LELKNYM+PYTC+GCKEKGFGPRYRC+     LH+A   
Sbjct: 1   MSIRP--EIVLRNHPSHPWHGLELKNYMKPYTCNGCKEKGFGPRYRCERCDFNLHQACSY 60

Query: 69  ------SHDYFP-----------------------------------------ENHQNRG 108
                 SHDYFP                                         + H    
Sbjct: 61  TSLRLSSHDYFPGSKFKFLRNPPKPCHPECIIRCDACRKTIKGYVFHCEEDDIDLHPCCR 120

BLAST of CaUC09G176330 vs. NCBI nr
Match: XP_008458931.1 (PREDICTED: uncharacterized protein LOC103498191 [Cucumis melo])

HSP 1 Score: 117.1 bits (292), Expect = 9.7e-23
Identity = 66/153 (43.14%), Postives = 77/153 (50.33%), Query Frame = 0

Query: 9   MSIGPTKNNILSNHPSHPWHVLELKNYMEPYTCDGCKEKGFGPRYRC-----DLHEAV-- 68
           MS+ P    +L NHPSHPWH LELKNY+EPYTCDGCKEKGFGPRYRC     DLH+A   
Sbjct: 1   MSVRP--EIVLRNHPSHPWHRLELKNYVEPYTCDGCKEKGFGPRYRCGRCDFDLHQACTY 60

Query: 69  ------SHDYFP-----------------------------------------ENHQNRG 108
                 SHDYFP                                         + H    
Sbjct: 61  TSLRLSSHDYFPGSKFKFLRNPPKPCHPECIIRCDACRKTIKGYVFHCKEDDIDLHPCCR 120

BLAST of CaUC09G176330 vs. NCBI nr
Match: KAA0037673.1 (uncharacterized protein E6C27_scaffold277G003430 [Cucumis melo var. makuwa] >TYK22816.1 uncharacterized protein E5676_scaffold311G00610 [Cucumis melo var. makuwa])

HSP 1 Score: 113.2 bits (282), Expect = 1.4e-21
Identity = 64/153 (41.83%), Postives = 76/153 (49.67%), Query Frame = 0

Query: 9   MSIGPTKNNILSNHPSHPWHVLELKNYMEPYTCDGCKEKGFGPRYRC-----DLHEAV-- 68
           MS+ P    +L NHPSHPWH LELKNY++PYTCDGC EKGFGPRYRC     DLH+A   
Sbjct: 1   MSVRP--EIVLRNHPSHPWHRLELKNYVKPYTCDGCMEKGFGPRYRCGRCGFDLHQACTY 60

Query: 69  ------SHDYFP-----------------------------------------ENHQNRG 108
                 SHDYFP                                         + H    
Sbjct: 61  TSLRLSSHDYFPGSKFKFLRNPPKPCHPECIIRCDACRKTIKGYVFHCKEDDIDLHPCCR 120

BLAST of CaUC09G176330 vs. NCBI nr
Match: KAG7016237.1 (hypothetical protein SDJN02_21343, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 108.2 bits (269), Expect = 4.5e-20
Identity = 64/157 (40.76%), Postives = 78/157 (49.68%), Query Frame = 0

Query: 5   RERSMSIGPTKNNILSNHPSHPWHVLELKNYMEPYTCDGCKEKGFGPRYRC-----DLH- 64
           +ER M+    +  +L NHPSHP HVLELKNYMEPYTC+GCKEKGFGPRYRC     DLH 
Sbjct: 247 KEREMA----REEMLRNHPSHPRHVLELKNYMEPYTCNGCKEKGFGPRYRCEKCDFDLHK 306

Query: 65  -------EAVSHDYFPENH------------------------QNRGLV----------- 108
                  E+VSH++FP +                            G V           
Sbjct: 307 PCTYDRVESVSHEFFPGSRFKFMRNPPEPCHPECRVRCDACRKSIEGFVFHCEEDDLDIH 366

BLAST of CaUC09G176330 vs. ExPASy TrEMBL
Match: A0A0A0KQX2 (Phorbol-ester/DAG-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G516560 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 4.7e-23
Identity = 66/153 (43.14%), Postives = 78/153 (50.98%), Query Frame = 0

Query: 9   MSIGPTKNNILSNHPSHPWHVLELKNYMEPYTCDGCKEKGFGPRYRCD-----LHEAV-- 68
           MSI P    +L NHPSHPWH LELKNYM+PYTC+GCKEKGFGPRYRC+     LH+A   
Sbjct: 1   MSIRP--EIVLRNHPSHPWHGLELKNYMKPYTCNGCKEKGFGPRYRCERCDFNLHQACSY 60

Query: 69  ------SHDYFP-----------------------------------------ENHQNRG 108
                 SHDYFP                                         + H    
Sbjct: 61  TSLRLSSHDYFPGSKFKFLRNPPKPCHPECIIRCDACRKTIKGYVFHCEEDDIDLHPCCR 120

BLAST of CaUC09G176330 vs. ExPASy TrEMBL
Match: A0A1S3C952 (uncharacterized protein LOC103498191 OS=Cucumis melo OX=3656 GN=LOC103498191 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 4.7e-23
Identity = 66/153 (43.14%), Postives = 77/153 (50.33%), Query Frame = 0

Query: 9   MSIGPTKNNILSNHPSHPWHVLELKNYMEPYTCDGCKEKGFGPRYRC-----DLHEAV-- 68
           MS+ P    +L NHPSHPWH LELKNY+EPYTCDGCKEKGFGPRYRC     DLH+A   
Sbjct: 1   MSVRP--EIVLRNHPSHPWHRLELKNYVEPYTCDGCKEKGFGPRYRCGRCDFDLHQACTY 60

Query: 69  ------SHDYFP-----------------------------------------ENHQNRG 108
                 SHDYFP                                         + H    
Sbjct: 61  TSLRLSSHDYFPGSKFKFLRNPPKPCHPECIIRCDACRKTIKGYVFHCKEDDIDLHPCCR 120

BLAST of CaUC09G176330 vs. ExPASy TrEMBL
Match: A0A5A7T3X1 (Phorbol-ester/DAG-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold311G00610 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 6.8e-22
Identity = 64/153 (41.83%), Postives = 76/153 (49.67%), Query Frame = 0

Query: 9   MSIGPTKNNILSNHPSHPWHVLELKNYMEPYTCDGCKEKGFGPRYRC-----DLHEAV-- 68
           MS+ P    +L NHPSHPWH LELKNY++PYTCDGC EKGFGPRYRC     DLH+A   
Sbjct: 1   MSVRP--EIVLRNHPSHPWHRLELKNYVKPYTCDGCMEKGFGPRYRCGRCGFDLHQACTY 60

Query: 69  ------SHDYFP-----------------------------------------ENHQNRG 108
                 SHDYFP                                         + H    
Sbjct: 61  TSLRLSSHDYFPGSKFKFLRNPPKPCHPECIIRCDACRKTIKGYVFHCKEDDIDLHPCCR 120

BLAST of CaUC09G176330 vs. ExPASy TrEMBL
Match: A0A6J1FN98 (uncharacterized protein LOC111445466 OS=Cucurbita moschata OX=3662 GN=LOC111445466 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 3.1e-19
Identity = 59/144 (40.97%), Postives = 73/144 (50.69%), Query Frame = 0

Query: 18  ILSNHPSHPWHVLELKNYMEPYTCDGCKEKGFGPRYRC-----DLHE--------AVSHD 77
           IL NHP+H  HVLELKNYMEPYTC+GCKEKGFGPRYRC     DLH+        +VSH+
Sbjct: 6   ILRNHPTHRRHVLELKNYMEPYTCNGCKEKGFGPRYRCEKCDFDLHKPCTYDRVASVSHE 65

Query: 78  YFPENHQN------------------------RGLV-----------------RKMTWME 108
           +FP +                           +G V                 +K   +E
Sbjct: 66  FFPGSRFRFMRNPPKPCHPECIIRCDACRKTIKGFVFHCEEDDLDIHPCCRELKKSYRIE 125

BLAST of CaUC09G176330 vs. ExPASy TrEMBL
Match: A0A5A7T4F3 (Phorbol-ester/DAG-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold311G00660 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 9.2e-19
Identity = 59/146 (40.41%), Postives = 70/146 (47.95%), Query Frame = 0

Query: 16  NNILSNHPSHPWHVLELKNYMEPYTCDGCKEKGFGPRYRC-----DLHEA--------VS 75
           N+IL NHPSHP H L+ +NY  PYTC GCK+KGFGPRYRC     D H+A        V 
Sbjct: 4   NDILRNHPSHPNHELDPQNYARPYTCHGCKQKGFGPRYRCQTCDFDFHQACTYTGTHPVY 63

Query: 76  HDYFPEN------------------------HQNRGLV-----------------RKMTW 108
           HDYFP +                        +  +G V                  +   
Sbjct: 64  HDYFPGSKFMFLRNPPEPCHPECKIRCDACRNTIKGFVFHCEEDDLDVHPCCWNLERSYQ 123

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038889227.18.5e-2748.37uncharacterized protein LOC120079117 [Benincasa hispida][more]
XP_004142836.19.7e-2343.14uncharacterized protein LOC101213594 [Cucumis sativus] >KAE8648542.1 hypothetica... [more]
XP_008458931.19.7e-2343.14PREDICTED: uncharacterized protein LOC103498191 [Cucumis melo][more]
KAA0037673.11.4e-2141.83uncharacterized protein E6C27_scaffold277G003430 [Cucumis melo var. makuwa] >TYK... [more]
KAG7016237.14.5e-2040.76hypothetical protein SDJN02_21343, partial [Cucurbita argyrosperma subsp. argyro... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KQX24.7e-2343.14Phorbol-ester/DAG-type domain-containing protein OS=Cucumis sativus OX=3659 GN=C... [more]
A0A1S3C9524.7e-2343.14uncharacterized protein LOC103498191 OS=Cucumis melo OX=3656 GN=LOC103498191 PE=... [more]
A0A5A7T3X16.8e-2241.83Phorbol-ester/DAG-type domain-containing protein OS=Cucumis melo var. makuwa OX=... [more]
A0A6J1FN983.1e-1940.97uncharacterized protein LOC111445466 OS=Cucurbita moschata OX=3662 GN=LOC1114454... [more]
A0A5A7T4F39.2e-1940.41Phorbol-ester/DAG-type domain-containing protein OS=Cucumis melo var. makuwa OX=... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004146DC1PFAMPF03107C1_2coord: 23..56
e-value: 1.8E-6
score: 28.1
NoneNo IPR availablePANTHERPTHR46477:SF5SUBFAMILY NOT NAMEDcoord: 78..107
NoneNo IPR availablePANTHERPTHR46477CYSTEINE/HISTIDINE-RICH C1 DOMAIN FAMILY PROTEINcoord: 19..58
NoneNo IPR availablePANTHERPTHR46477:SF5SUBFAMILY NOT NAMEDcoord: 19..58
NoneNo IPR availablePANTHERPTHR46477CYSTEINE/HISTIDINE-RICH C1 DOMAIN FAMILY PROTEINcoord: 78..107
NoneNo IPR availableSUPERFAMILY57889Cysteine-rich domaincoord: 20..63

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC09G176330.1CaUC09G176330.1mRNA