CaUC09G174730 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTAACCCAAAACATATCGTCATGGCAATGAGAGATGAATTTCACTCTGAACCTTTTTAAACTTTGAAGCTAATTGTAACCTTAATATTAGTTGTCCTTAAAGTTCAACCAGCTGGCCATTAAATTGAACCTACAAAGCATTAGGTCTGATTTTAAGAGGTTGGTTTTCCCACATAATCAGAGGTTTTGGCTATAAATTTCAGTCCCCCAAACTAAACTTAATTATCTCATTTCTTTTGCCTTTAAAAATTTGAGTATCCAAATGAAGTTTCATCAGCAAACTGTCAAGAAAATCCATCCCAATTCTCCAACTCCAATGCTCATTCTCTTTCTCCTTTTCGAGCTTCTTTATATAACCATTTCATGTCAAGACATTGCATCACATAACTCTTCTCAGGTAATTAATCATACAAGTTTGTTTATTTTCCATATAAAGTAGATCAAATTGACCCCTCCCCTTTTGTTTACTTCTTCAGCTGCTTTCAGAAGGCAGTGGAGACTATGACTTCTTTTACCTTGTTCAACAGGTAATTAAATTTTTGTCTATTCCCATTTGGGTTATATTATCATCTCTCTGCTTATTTCTATTTGGTAAGCATTAGTGGCAGATTTCTTTGTGCAATTTGAGGCCTTGTCAAAAACCAGCAAGACCCACATTCAGTATTTATGGCTTCTGGCCTTCTTCTTCTGGGGTTCCCAATTGCAAAAATGGAACCATTTTTTATCCTTCAAAGGTATTTTTGCTGGACAGAGAGATAGATAGGGAGGGTTTGATGATTCAAATTCATTATGATGTTTTGTTTGTAAATGGCTTTTAATAGATTTTGGACCTGAAAAATGAGTTAGATAGAGAATGGCCATCTCTTGAGGTGGAGGAGAATGAGCAAATGTGGAAGAAAGAGTGGGAAAGGCATGGAATTTGTTCTGAGCCACTGCTTACTCAACATGCATTCTTTGAAACTGCACTCGAGCTTAAGCAAACTTTTGATCTCTTCGCTATCCTAGCAAACAGAGGTTTGTTTTTCAAGCTTTAAACAAAACTTTGATCTTCATTGAAAAATATTGCACTAGTCCTAAGGGAAATCAGAAATGGCTTTTAGCCGTAATACTTCTTTGTTCTTCAAGTTTTGAAAATTGTTTTAAGTAGTCCTTGTACTAGTTTATTGTTAATATTTTGGACAAAAAATTTGGTAAGTTAAGAGATAGAATTGCTAAACTATTCAGAGATAATGGGAGGAGATAGGAAGGAAAAGAAAATGAAGGATTCACTAAACTTTGGAAAGAATACAAGCACGTCGTCATGATGTGATAACAAATAGTAGGGCTAATAACTTTTCAAACATGTGTTCAATTAGATGACAAAGACAGGCGCAAAATAACAATAAAGAAAGTATATCATCTATTATTCTAACACTAGAGCTAATTGATGTGTTGATTCTAAAATCTAGAGAAAAAAAAAAGTAACTTTCACGTCACAACAATGATAAATTTGTGTGGAGGTAAAAGAACATGACTTGCAAAAGAAAAAGGAACATGCACACTGGTGTGGTGCTACACACATTCCGATGCTTAACTCAAAGAGTAAAATATAGTGCGGAAGCTTTAGGATTTGAGAGACAAAATAGACTTACCCCTCCTTGAAGTTATAATGATGTATTTGTAGAAGTAGTCGACCTAAGTTATCCTCCATAAGGTTTCAAAGTCACATTAAGATCAACCTTAGGATCCTTAGGTACAGGCCCGCGAAGGGCATTGCCCTGTTTGACATTTTGCAAGGGTCGGCTTAGGTCGAGGCCGAGCATCTCCTCTAGGCCCAGTCATGCTTTGGGTTGGGGCATGCCTCACTAAATACTTTGTTAGGTCAAGGCTGAACATGTTGGCTTGGGCCAAGGCTCAAGCCAACCCACTCTCCTAGGCCTATTTTAGCCCTAGGATACTATTTTCGGTCCAAATTTTATTACTTTCTTAACTTCGTCGCTTCCTTTCTTATTTTGGTATCAATTATATCTTTTGGTCTAAAATCACCCCATAACATTATGTATGAGCAATTATATCATCCTTTAGTTTATCATGTCATATCTACGTCGGATCACTAATGATAAACATACTCAAAACACCACTAAAAATCATATTCAAAAGTTGAAAAAAAAAAATTATCTACATAGACAAGACAGTACATTTCAAGACATAACTCAAACGAAGGTAACACAACAGTAGATTAAATGCTAAGAATCTCACTTTAACATACAGCATCCAATGTCATTAGGTGAATTAATAATTTCCTTTCAACTACTTGACTTCACTTTCTAGAAGCCATTACAATACTTGGCACTATGTTATCAGTTTTCTTAGGTTAATAATGTGGAGAAAGAAAAGTTTATGAAATAGTTGGAATGCAGGAATCTTTCCATTTGGAGAGGTGTATGGCTTAGATAACATAAGTGATGCTATTAGAGCTGCGACAGGACATACCCCACAAGTGGAATGCAAGTCATACAAACACATTCCTCTGCTCTCCAACATCTTCCTTTGCTTCCAATACACTGCAACTTCCATTCGTATTGTGGACTGCCCCATTATAAGAAGATGCAATTTCCAAGCAATCCTTTTCCCTTATGATCTATTTGGTCCATCTTAGAAACTGAAAATCCACTCTGTAATGGCTCCAGAAACAATCCCCATCTATTTAAGTTTCTCATATCAACTTTCTGGTGTTTTGTTAATGGCTATACAAGGAATTTGCACTATTCTAATTTTAGACCTCTGTTTTGATGTTTGTGTTAAATGATAAGTTGTTTGTTACTTATCAAAGATATTGACGACAATATTTTTTTACGGTTATGTAGTGTTGAAATTACAAACTCGTTTTTTTCTTTTTAA CTAACCCAAAACATATCGTCATGGCAATGAGAGATGAATTTCACTCTGAACCTTTTTAAACTTTGAAGCTAATTGTAACCTTAATATTAGTTGTCCTTAAAGTTCAACCAGCTGGCCATTAAATTGAACCTACAAAGCATTAGGTCTGATTTTAAGAGGTTGGTTTTCCCACATAATCAGAGGTTTTGGCTATAAATTTCAGTCCCCCAAACTAAACTTAATTATCTCATTTCTTTTGCCTTTAAAAATTTGAGTATCCAAATGAAGTTTCATCAGCAAACTGTCAAGAAAATCCATCCCAATTCTCCAACTCCAATGCTCATTCTCTTTCTCCTTTTCGAGCTTCTTTATATAACCATTTCATGTCAAGACATTGCATCACATAACTCTTCTCAGCTGCTTTCAGAAGGCAGTGGAGACTATGACTTCTTTTACCTTGTTCAACAGTGGCAGATTTCTTTGTGCAATTTGAGGCCTTGTCAAAAACCAGCAAGACCCACATTCAGTATTTATGGCTTCTGGCCTTCTTCTTCTGGGGTTCCCAATTGCAAAAATGGAACCATTTTTTATCCTTCAAAGATTTTGGACCTGAAAAATGAGTTAGATAGAGAATGGCCATCTCTTGAGGTGGAGGAGAATGAGCAAATGTGGAAGAAAGAGTGGGAAAGGCATGGAATTTGTTCTGAGCCACTGCTTACTCAACATGCATTCTTTGAAACTGCACTCGAGCTTAAGCAAACTTTTGATCTCTTCGCTATCCTAGCAAACAGAGGAATCTTTCCATTTGGAGAGGTGTATGGCTTAGATAACATAAGTGATGCTATTAGAGCTGCGACAGGACATACCCCACAAGTGGAATGCAAGTCATACAAACACATTCCTCTGCTCTCCAACATCTTCCTTTGCTTCCAATACACTGCAACTTCCATTCGTATTGTGGACTGCCCCATTATAAGAAGATGCAATTTCCAAGCAATCCTTTTCCCTTATGATCTATTTGGTCCATCTTAGAAACTGAAAATCCACTCTGTAATGGCTCCAGAAACAATCCCCATCTATTTAAGTTTCTCATATCAACTTTCTGGTGTTTTGTTAATGGCTATACAAGGAATTTGCACTATTCTAATTTTAGACCTCTGTTTTGATGTTTGTGTTAAATGATAAGTTGTTTGTTACTTATCAAAGATATTGACGACAATATTTTTTTACGGTTATGTAGTGTTGAAATTACAAACTCGTTTTTTTCTTTTTAA ATGAAGTTTCATCAGCAAACTGTCAAGAAAATCCATCCCAATTCTCCAACTCCAATGCTCATTCTCTTTCTCCTTTTCGAGCTTCTTTATATAACCATTTCATGTCAAGACATTGCATCACATAACTCTTCTCAGCTGCTTTCAGAAGGCAGTGGAGACTATGACTTCTTTTACCTTGTTCAACAGTGGCAGATTTCTTTGTGCAATTTGAGGCCTTGTCAAAAACCAGCAAGACCCACATTCAGTATTTATGGCTTCTGGCCTTCTTCTTCTGGGGTTCCCAATTGCAAAAATGGAACCATTTTTTATCCTTCAAAGATTTTGGACCTGAAAAATGAGTTAGATAGAGAATGGCCATCTCTTGAGGTGGAGGAGAATGAGCAAATGTGGAAGAAAGAGTGGGAAAGGCATGGAATTTGTTCTGAGCCACTGCTTACTCAACATGCATTCTTTGAAACTGCACTCGAGCTTAAGCAAACTTTTGATCTCTTCGCTATCCTAGCAAACAGAGGAATCTTTCCATTTGGAGAGGTGTATGGCTTAGATAACATAAGTGATGCTATTAGAGCTGCGACAGGACATACCCCACAAGTGGAATGCAAGTCATACAAACACATTCCTCTGCTCTCCAACATCTTCCTTTGCTTCCAATACACTGCAACTTCCATTCGTATTGTGGACTGCCCCATTATAAGAAGATGCAATTTCCAAGCAATCCTTTTCCCTTATGATCTATTTGGTCCATCTTAG MKFHQQTVKKIHPNSPTPMLILFLLFELLYITISCQDIASHNSSQLLSEGSGDYDFFYLVQQWQISLCNLRPCQKPARPTFSIYGFWPSSSGVPNCKNGTIFYPSKILDLKNELDREWPSLEVEENEQMWKKEWERHGICSEPLLTQHAFFETALELKQTFDLFAILANRGIFPFGEVYGLDNISDAIRAATGHTPQVECKSYKHIPLLSNIFLCFQYTATSIRIVDCPIIRRCNFQAILFPYDLFGPS Homology
BLAST of CaUC09G174730 vs. NCBI nr
Match: XP_038890875.1 (ribonuclease 3-like isoform X1 [Benincasa hispida]) HSP 1 Score: 484.2 bits (1245), Expect = 6.8e-133 Identity = 224/249 (89.96%), Postives = 239/249 (95.98%), Query Frame = 0
BLAST of CaUC09G174730 vs. NCBI nr
Match: XP_038890876.1 (ribonuclease 3-like isoform X2 [Benincasa hispida]) HSP 1 Score: 473.0 bits (1216), Expect = 1.6e-129 Identity = 222/249 (89.16%), Postives = 237/249 (95.18%), Query Frame = 0
BLAST of CaUC09G174730 vs. NCBI nr
Match: XP_004148699.1 (ribonuclease 1 isoform X1 [Cucumis sativus]) HSP 1 Score: 434.1 bits (1115), Expect = 8.1e-118 Identity = 203/249 (81.53%), Postives = 222/249 (89.16%), Query Frame = 0
BLAST of CaUC09G174730 vs. NCBI nr
Match: XP_011655995.1 (ribonuclease 1 isoform X2 [Cucumis sativus] >KAE8648923.1 hypothetical protein Csa_007813 [Cucumis sativus]) HSP 1 Score: 422.9 bits (1086), Expect = 1.9e-114 Identity = 201/249 (80.72%), Postives = 220/249 (88.35%), Query Frame = 0
BLAST of CaUC09G174730 vs. NCBI nr
Match: XP_008459317.1 (PREDICTED: ribonuclease 1-like isoform X1 [Cucumis melo]) HSP 1 Score: 422.9 bits (1086), Expect = 1.9e-114 Identity = 197/240 (82.08%), Postives = 217/240 (90.42%), Query Frame = 0
BLAST of CaUC09G174730 vs. ExPASy Swiss-Prot
Match: P42813 (Ribonuclease 1 OS=Arabidopsis thaliana OX=3702 GN=RNS1 PE=1 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 1.1e-29 Identity = 72/194 (37.11%), Postives = 104/194 (53.61%), Query Frame = 0
BLAST of CaUC09G174730 vs. ExPASy Swiss-Prot
Match: P80022 (Extracellular ribonuclease LE OS=Solanum lycopersicum OX=4081 PE=1 SV=2) HSP 1 Score: 131.3 bits (329), Expect = 1.5e-29 Identity = 75/220 (34.09%), Postives = 114/220 (51.82%), Query Frame = 0
BLAST of CaUC09G174730 vs. ExPASy Swiss-Prot
Match: P80196 (Intracellular ribonuclease LX OS=Solanum lycopersicum OX=4081 GN=RNALX PE=1 SV=2) HSP 1 Score: 124.8 bits (312), Expect = 1.4e-27 Identity = 71/192 (36.98%), Postives = 101/192 (52.60%), Query Frame = 0
BLAST of CaUC09G174730 vs. ExPASy Swiss-Prot
Match: Q7M438 (Ribonuclease DdI OS=Dictyostelium discoideum OX=44689 GN=ddiA PE=1 SV=3) HSP 1 Score: 110.5 bits (275), Expect = 2.7e-23 Identity = 71/216 (32.87%), Postives = 111/216 (51.39%), Query Frame = 0
BLAST of CaUC09G174730 vs. ExPASy Swiss-Prot
Match: P23540 (Ribonuclease MC OS=Momordica charantia OX=3673 PE=1 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 4.6e-23 Identity = 54/182 (29.67%), Postives = 92/182 (50.55%), Query Frame = 0
BLAST of CaUC09G174730 vs. ExPASy TrEMBL
Match: A0A0A0KSB0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G636550 PE=3 SV=1) HSP 1 Score: 434.1 bits (1115), Expect = 3.9e-118 Identity = 203/249 (81.53%), Postives = 222/249 (89.16%), Query Frame = 0
BLAST of CaUC09G174730 vs. ExPASy TrEMBL
Match: A0A1S3C9D7 (ribonuclease 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498487 PE=3 SV=1) HSP 1 Score: 422.9 bits (1086), Expect = 9.1e-115 Identity = 197/240 (82.08%), Postives = 217/240 (90.42%), Query Frame = 0
BLAST of CaUC09G174730 vs. ExPASy TrEMBL
Match: A0A6J1K331 (ribonuclease 1-like OS=Cucurbita maxima OX=3661 GN=LOC111489614 PE=3 SV=1) HSP 1 Score: 415.6 bits (1067), Expect = 1.4e-112 Identity = 198/243 (81.48%), Postives = 219/243 (90.12%), Query Frame = 0
BLAST of CaUC09G174730 vs. ExPASy TrEMBL
Match: A0A1S3C9W2 (ribonuclease 1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498487 PE=3 SV=1) HSP 1 Score: 411.8 bits (1057), Expect = 2.1e-111 Identity = 195/240 (81.25%), Postives = 215/240 (89.58%), Query Frame = 0
BLAST of CaUC09G174730 vs. ExPASy TrEMBL
Match: A0A6J1C1D3 (ribonuclease 1-like OS=Momordica charantia OX=3673 GN=LOC111006533 PE=3 SV=1) HSP 1 Score: 405.6 bits (1041), Expect = 1.5e-109 Identity = 197/257 (76.65%), Postives = 217/257 (84.44%), Query Frame = 0
BLAST of CaUC09G174730 vs. TAIR 10
Match: AT1G14220.1 (Ribonuclease T2 family protein ) HSP 1 Score: 139.8 bits (351), Expect = 2.9e-33 Identity = 77/198 (38.89%), Postives = 109/198 (55.05%), Query Frame = 0
BLAST of CaUC09G174730 vs. TAIR 10
Match: AT2G02990.1 (ribonuclease 1 ) HSP 1 Score: 131.7 bits (330), Expect = 8.0e-31 Identity = 72/194 (37.11%), Postives = 104/194 (53.61%), Query Frame = 0
BLAST of CaUC09G174730 vs. TAIR 10
Match: AT1G26820.1 (ribonuclease 3 ) HSP 1 Score: 131.3 bits (329), Expect = 1.0e-30 Identity = 76/204 (37.25%), Postives = 110/204 (53.92%), Query Frame = 0
BLAST of CaUC09G174730 vs. TAIR 10
Match: AT1G14210.1 (Ribonuclease T2 family protein ) HSP 1 Score: 106.7 bits (265), Expect = 2.8e-23 Identity = 60/197 (30.46%), Postives = 94/197 (47.72%), Query Frame = 0
BLAST of CaUC09G174730 vs. TAIR 10
Match: AT2G39780.1 (ribonuclease 2 ) HSP 1 Score: 75.5 bits (184), Expect = 6.8e-14 Identity = 57/190 (30.00%), Postives = 84/190 (44.21%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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