CaUC09G174480 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC09G174480
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Transmembrane protein 230
Location	Ciama_Chr09: 33569776 .. 33571734 (+)
RNA-Seq Expression	CaUC09G174480
Synteny	CaUC09G174480

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCATCTAGACGGAATGTTCGTTACAGCTCCCTTGCCACTGATGATAACGATCTTGATTCAGAGGGAAGTCAATATGACCCTCGCTTTTACTATACACCAAAAGCTTTTGACAAGATCCCGTGGAAATCTATCGCTCTTGCTGTCTTCCTCTTACTTCTTGGATCATTGCTTCTCTTTCTTTCGTACTTCGTATTAACTGGTCACATGGCGGGAGAGAAATCACAAGCTTATGGTCTTTTAGCATTGGGGTTTCTTACCTTCCTCCCAGGTACTGATGAAATTTTCTGTTTCATAATTTCTTTAATGCATTTCTTTGTCATTTATTTTCACTGTAGGCAAAGTGTGTTCATTTGGCTTTTGTTTGTTTCTGAAATTATTACATACAATATGGCCTTGGTGTGCCATAGCTTAGTAGGAAGCTTGAATGTTGAAAGTATATTAAACTCCACCAAGAAAGTTTGTATAAAAAAATTTCTTGCATATGGACCACTTTTCATGTGAAGAGTATTCGCTGATAGTTTTGTGCTCTACCGAATTTAAGTCACTGTTAATTTAATTTTGGTTCATAGATCTCATGCAACTGTGGTACTTGCTTGCTTCTCTGCCATCCTGTCTTGGTCTGGGACATTCTAGTTCCTAGAATTATGATTCTTATTTGTTTTCTTCTTTTTCTTTACGTAATGCGAAATGTATCCAGAAATCTAAAATGGAGTGTAAATCAAAGTTTTGTTATTGTTGAATATGACATCAGTAGAAGTTCCGTTGACTCACCTGTCCAAGAAGTTTGATAATCTGAGCAACTTTTGCTTTGTTGATGCAGGCTTTTATGAGACTAGGATTGCATATTATGCATGGAGAGGGGCCAATGGATATCGCTTTGCATCCATTCCCGATTACTAAGGTGTTCCTATCTTGATGGTGTATGCTTGTCCCATCTTTCTCTCAATGTAAAACTATCATATAAAGTCAGAAAAAATGGTTTGTACAGAATCAGGTCTCTTGAGTTTGTAACGTATTCTTCCTTTTTTCTTCATTCTCATAGGTTGTTTAGGGTTAGGAAAATGATAAATGATGTAGCTTTAATTCATTAACTTGACAAGTCTTGTATTTAAACTCAAAACCTTTATGCCGATGCAAATACTTCGAGTGAGATTACTGCGTGGAGCAAGGTTTGTGTAGAATTTGAAGTTTGTCTGGATTACATTATGTAGAAAAATAACACTTGTGTCGTAATTTATAATATGTAGACTCTGATTACAGGCCAACTCACTAGTTGGATGCTCAAAACTTGACTGACAATGTGAAAGGAAAGCTTTAACCTGAGTGAGAGAATTTTTTTGGTGGTCAAAAATACATTTTTAGTCCTTGATGGTTGAATTTAGTAGCATCTTAGTCCTTGAGTTTTCAAATTTCAACTTTAACTTTTGGGTTTGAGTTTTGTAGCATTTATGTCTCTACCATCAATTTTCCAATTGTGGTAAACTCATACTGTTTTGTTCATAATCTGAGCGCTAGTTATAGATTGATTGAAGAATTGTTGAAGCATATCCTTGGTTTAGCAATGGACAAATTAAAAGATTTGTTCACCTTGTCTTCAAATGGCTACAATCCCGCATGCTTGTGTTAATGCTGGACGGCAAGGCAAACAAAGAACAATAATTCTTTGATAACACAAGAAGGGGCCAAACCTAAGGATTTATTTTATGGTTTAAGATCCTTATCTGTGAATTAACATATTTTTGCACCAATTTGATTTGGTAATAAACTTCTTTATGTAAGGAGATTATAGACTATGTTTTTGTTACAACATGTAAGGTGGGAGAATTGAACGTATAATTTCGTTGATAGTTTGAGCACTATGTTCATTTTGTCATTTTGGCTATAGGATATCATTGGTATGTGAACATTCTTTGCTTGCACAACTTCTTTATGTATGTTTTTCAAGTTTTGAGATGA

mRNA sequence

ATGGCATCTAGACGGAATGTTCGTTACAGCTCCCTTGCCACTGATGATAACGATCTTGATTCAGAGGGAAGTCAATATGACCCTCGCTTTTACTATACACCAAAAGCTTTTGACAAGATCCCGTGGAAATCTATCGCTCTTGCTGTCTTCCTCTTACTTCTTGGATCATTGCTTCTCTTTCTTTCGTACTTCGTATTAACTGGTCACATGGCGGGAGAGAAATCACAAGCTTATGGTCTTTTAGCATTGGGGTTTCTTACCTTCCTCCCAGGTACTGATGAAATTTTCTGTTTCATAATTTCTTTAATGCATTTCTTTGTCATTTATTTTCACTGTAGGCAAAGTGTGTTCATTTGGCTTTTGTTTGTTTCTGAAATTATTACATACAATATGGCCTTGGTGTGCCATAGCTTAGTAGGAAGCTTGAATGTTGAAAGTATATTAAACTCCACCAAGAAAGCTTTTATGAGACTAGGATTGCATATTATGCATGGAGAGGGGCCAATGGATATCGCTTTGCATCCATTCCCGATTACTAAGTTTGAGCACTATGTTCATTTTGTCATTTTGGCTATAGGATATCATTGGTATGTGAACATTCTTTGCTTGCACAACTTCTTTATGTATGTTTTTCAAGTTTTGAGATGA

Coding sequence (CDS)

ATGGCATCTAGACGGAATGTTCGTTACAGCTCCCTTGCCACTGATGATAACGATCTTGATTCAGAGGGAAGTCAATATGACCCTCGCTTTTACTATACACCAAAAGCTTTTGACAAGATCCCGTGGAAATCTATCGCTCTTGCTGTCTTCCTCTTACTTCTTGGATCATTGCTTCTCTTTCTTTCGTACTTCGTATTAACTGGTCACATGGCGGGAGAGAAATCACAAGCTTATGGTCTTTTAGCATTGGGGTTTCTTACCTTCCTCCCAGGTACTGATGAAATTTTCTGTTTCATAATTTCTTTAATGCATTTCTTTGTCATTTATTTTCACTGTAGGCAAAGTGTGTTCATTTGGCTTTTGTTTGTTTCTGAAATTATTACATACAATATGGCCTTGGTGTGCCATAGCTTAGTAGGAAGCTTGAATGTTGAAAGTATATTAAACTCCACCAAGAAAGCTTTTATGAGACTAGGATTGCATATTATGCATGGAGAGGGGCCAATGGATATCGCTTTGCATCCATTCCCGATTACTAAGTTTGAGCACTATGTTCATTTTGTCATTTTGGCTATAGGATATCATTGGTATGTGAACATTCTTTGCTTGCACAACTTCTTTATGTATGTTTTTCAAGTTTTGAGATGA

Protein sequence

MASRRNVRYSSLATDDNDLDSEGSQYDPRFYYTPKAFDKIPWKSIALAVFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGTDEIFCFIISLMHFFVIYFHCRQSVFIWLLFVSEIITYNMALVCHSLVGSLNVESILNSTKKAFMRLGLHIMHGEGPMDIALHPFPITKFEHYVHFVILAIGYHWYVNILCLHNFFMYVFQVLR

Homology

[Close]

BLAST of CaUC09G174480 vs. NCBI nr
Match: KAA0039453.1 (transmembrane protein 230 [Cucumis melo var. makuwa] >TYK00643.1 transmembrane protein 230 [Cucumis melo var. makuwa])

HSP 1 Score: 211.8 bits (538), Expect = 5.7e-51
Identity = 120/182 (65.93%), Postives = 137/182 (75.27%), Query Frame = 0


Query: 1   MASRRNVRYSSLATDDNDLDSEGSQYDPRFYYTPKAFDKIPWKSIALAVFLLLLGSLLLF 60
           MASRRN+RYSSLA+DDND+DSEGS++DPRFYYTPKAFDKIPWKSIALA+FLLLLGSLLLF
Sbjct: 1   MASRRNIRYSSLASDDNDVDSEGSRFDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLF 60

Query: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGTDEIFCFIISLMHFFVIYFH--CRQSVFI 120
           LSYFVLTGHMAGEKSQAYGLLALGFLTFLP    +F   + L   F   +   C Q+   
Sbjct: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPVVWHLF---VELNSAFKNSYKTWCEQN--- 120

Query: 121 WLLFVSEIITYNMALVCHSLVGSLNVESILNSTKKAFMRLGLHIMHGEGPMDIALHPFPI 180
            LL    +++  ++L    L      E++      AFMRL LHIMHGEGPMDIALHPFPI
Sbjct: 121 -LLSFGRMVSLYLSLFGEEL-KQYQEENVEECFGLAFMRLELHIMHGEGPMDIALHPFPI 174

[Close]

BLAST of CaUC09G174480 vs. NCBI nr
Match: XP_023521905.1 (transmembrane protein 230-like [Cucurbita pepo subsp. pepo] >XP_023521962.1 transmembrane protein 230-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 174.9 bits (442), Expect = 7.7e-40
Identity = 88/91 (96.70%), Postives = 89/91 (97.80%), Query Frame = 0


Query: 1  MASRRNVRYSSLATDDNDLDSEGSQYDPRFYYTPKAFDKIPWKSIALAVFLLLLGSLLLF 60
          MASRRNVRYSSLA DDNDLD EGSQYDPRFYYTPKAFDKIPWKSIALA+FLLLLGSLLLF
Sbjct: 1  MASRRNVRYSSLAADDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSLLLF 60

Query: 61 LSYFVLTGHMAGEKSQAYGLLALGFLTFLPG 92
          LSYFVLTGHMAGEKSQAYGLLALGFLTFLPG
Sbjct: 61 LSYFVLTGHMAGEKSQAYGLLALGFLTFLPG 91

[Close]

BLAST of CaUC09G174480 vs. NCBI nr
Match: XP_008459349.1 (PREDICTED: transmembrane protein 230 [Cucumis melo])

HSP 1 Score: 173.7 bits (439), Expect = 1.7e-39
Identity = 85/91 (93.41%), Postives = 91/91 (100.00%), Query Frame = 0


Query: 1  MASRRNVRYSSLATDDNDLDSEGSQYDPRFYYTPKAFDKIPWKSIALAVFLLLLGSLLLF 60
          MASRRN+RYSSLA+DDND+DSEGS++DPRFYYTPKAFDKIPWKSIALA+FLLLLGSLLLF
Sbjct: 1  MASRRNIRYSSLASDDNDVDSEGSRFDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLF 60

Query: 61 LSYFVLTGHMAGEKSQAYGLLALGFLTFLPG 92
          LSYFVLTGHMAGEKSQAYGLLALGFLTFLPG
Sbjct: 61 LSYFVLTGHMAGEKSQAYGLLALGFLTFLPG 91

[Close]

BLAST of CaUC09G174480 vs. NCBI nr
Match: XP_022961740.1 (transmembrane protein 230-like [Cucurbita moschata] >XP_022961747.1 transmembrane protein 230-like [Cucurbita moschata] >KAG6602515.1 Transmembrane protein 230, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033189.1 Transmembrane protein-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 173.3 bits (438), Expect = 2.2e-39
Identity = 87/91 (95.60%), Postives = 88/91 (96.70%), Query Frame = 0


Query: 1  MASRRNVRYSSLATDDNDLDSEGSQYDPRFYYTPKAFDKIPWKSIALAVFLLLLGSLLLF 60
          MASRRNVRYSSLA DDNDLD EGSQYDPRFYYTPKAFDKIPWKSIALA+FLLLLGS LLF
Sbjct: 1  MASRRNVRYSSLAADDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSFLLF 60

Query: 61 LSYFVLTGHMAGEKSQAYGLLALGFLTFLPG 92
          LSYFVLTGHMAGEKSQAYGLLALGFLTFLPG
Sbjct: 61 LSYFVLTGHMAGEKSQAYGLLALGFLTFLPG 91

[Close]

BLAST of CaUC09G174480 vs. NCBI nr
Match: XP_022990725.1 (transmembrane protein 230-like [Cucurbita maxima] >XP_022990726.1 transmembrane protein 230-like [Cucurbita maxima] >XP_022990727.1 transmembrane protein 230-like [Cucurbita maxima])

HSP 1 Score: 172.9 bits (437), Expect = 2.9e-39
Identity = 87/91 (95.60%), Postives = 89/91 (97.80%), Query Frame = 0


Query: 1  MASRRNVRYSSLATDDNDLDSEGSQYDPRFYYTPKAFDKIPWKSIALAVFLLLLGSLLLF 60
          MASRR+VRYSSLA DDNDLD EGSQYDPRFYYTPKAFDKIPWKSIALA+FLLLLGSLLLF
Sbjct: 1  MASRRSVRYSSLAADDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSLLLF 60

Query: 61 LSYFVLTGHMAGEKSQAYGLLALGFLTFLPG 92
          LSYFVLTGHMAGEKSQAYGLLALGFLTFLPG
Sbjct: 61 LSYFVLTGHMAGEKSQAYGLLALGFLTFLPG 91

[Close]

BLAST of CaUC09G174480 vs. ExPASy Swiss-Prot
Match: Q5ZLH4 (Transmembrane protein 230 OS=Gallus gallus OX=9031 GN=TMEM230 PE=2 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 6.4e-05
Identity = 33/87 (37.93%), Postives = 51/87 (58.62%), Query Frame = 0


Query: 7  VRYSSLA-TDDNDLDSEGSQYDPRFYYTPKAFDKIPWKSIALAVFLLLLGSLLLFLSYFV 66
          V+YS LA TDD  +D +  +  P          KIP+K+IALAV L ++G+ L+ +   +
Sbjct: 17 VKYSKLASTDDGYIDLQFKKSPP----------KIPYKAIALAVVLFMIGTFLIIIGALL 76

Query: 67 LTGHMA-GEKSQAYGLLALGFLTFLPG 92
          L G+++ G   +A  +L +G L FLPG
Sbjct: 77 LAGYISKGGTDRAIPVLIIGILVFLPG 93

[Close]

BLAST of CaUC09G174480 vs. ExPASy Swiss-Prot
Match: Q8CIB6 (Transmembrane protein 230 OS=Mus musculus OX=10090 GN=Tmem230 PE=1 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 1.1e-04
Identity = 33/87 (37.93%), Postives = 51/87 (58.62%), Query Frame = 0


Query: 7  VRYSSLA-TDDNDLDSEGSQYDPRFYYTPKAFDKIPWKSIALAVFLLLLGSLLLFLSYFV 66
          V+YS LA TDD  +D +  +  P          KIP+K+IALA  L L+G+ L+ +   +
Sbjct: 17 VKYSRLASTDDGYIDLQFKKSPP----------KIPYKAIALATVLFLIGTFLIIIGSLL 76

Query: 67 LTGHMA-GEKSQAYGLLALGFLTFLPG 92
          L+G+++ G   +A  +L +G L FLPG
Sbjct: 77 LSGYISKGGADRAVPVLIIGILVFLPG 93

[Close]

BLAST of CaUC09G174480 vs. ExPASy Swiss-Prot
Match: Q96A57 (Transmembrane protein 230 OS=Homo sapiens OX=9606 GN=TMEM230 PE=1 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 1.9e-04
Identity = 32/86 (37.21%), Postives = 51/86 (59.30%), Query Frame = 0


Query: 7  VRYSSLATDDNDLDSEGSQYDPRFYYTPKAFDKIPWKSIALAVFLLLLGSLLLFLSYFVL 66
          V+YS L++ D+         D +F  TP    KIP+K+IALA  L L+G+ L+ +   +L
Sbjct: 17 VKYSRLSSTDD------GYIDLQFKKTP---PKIPYKAIALATVLFLIGAFLIIIGSLLL 76

Query: 67 TGHMA-GEKSQAYGLLALGFLTFLPG 92
          +G+++ G   +A  +L +G L FLPG
Sbjct: 77 SGYISKGGADRAVPVLIIGILVFLPG 93

[Close]

BLAST of CaUC09G174480 vs. ExPASy Swiss-Prot
Match: Q5BJP5 (Transmembrane protein 230 OS=Rattus norvegicus OX=10116 GN=Tmem230 PE=1 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 2.4e-04
Identity = 32/87 (36.78%), Postives = 51/87 (58.62%), Query Frame = 0


Query: 7  VRYSSL-ATDDNDLDSEGSQYDPRFYYTPKAFDKIPWKSIALAVFLLLLGSLLLFLSYFV 66
          V+YS L +TDD  +D +  +  P          KIP+K+IALA  L L+G+ L+ +   +
Sbjct: 17 VKYSRLSSTDDGYIDLQFKKSPP----------KIPYKAIALATVLFLIGTFLIIIGSLL 76

Query: 67 LTGHMA-GEKSQAYGLLALGFLTFLPG 92
          L+G+++ G   +A  +L +G L FLPG
Sbjct: 77 LSGYISKGGADRAVPVLIIGILVFLPG 93

[Close]

BLAST of CaUC09G174480 vs. ExPASy Swiss-Prot
Match: Q5E975 (Transmembrane protein 230 OS=Bos taurus OX=9913 GN=TMEM230 PE=2 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 3.2e-04
Identity = 32/87 (36.78%), Postives = 50/87 (57.47%), Query Frame = 0


Query: 7  VRYSSL-ATDDNDLDSEGSQYDPRFYYTPKAFDKIPWKSIALAVFLLLLGSLLLFLSYFV 66
          V+YS L +TDD  +D +  +  P          KIP+K+IALA  L L+G+ L+ +   +
Sbjct: 17 VKYSRLSSTDDGYIDLQFKKSPP----------KIPYKAIALATVLFLIGAFLIIIGSLL 76

Query: 67 LTGHMA-GEKSQAYGLLALGFLTFLPG 92
          L G+++ G   +A  +L +G L FLPG
Sbjct: 77 LAGYISKGGADRAVPVLIIGILVFLPG 93

[Close]

BLAST of CaUC09G174480 vs. ExPASy TrEMBL
Match: A0A5A7T915 (Transmembrane protein 230 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G002650 PE=3 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 2.7e-51
Identity = 120/182 (65.93%), Postives = 137/182 (75.27%), Query Frame = 0


Query: 1   MASRRNVRYSSLATDDNDLDSEGSQYDPRFYYTPKAFDKIPWKSIALAVFLLLLGSLLLF 60
           MASRRN+RYSSLA+DDND+DSEGS++DPRFYYTPKAFDKIPWKSIALA+FLLLLGSLLLF
Sbjct: 1   MASRRNIRYSSLASDDNDVDSEGSRFDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLF 60

Query: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGTDEIFCFIISLMHFFVIYFH--CRQSVFI 120
           LSYFVLTGHMAGEKSQAYGLLALGFLTFLP    +F   + L   F   +   C Q+   
Sbjct: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPVVWHLF---VELNSAFKNSYKTWCEQN--- 120

Query: 121 WLLFVSEIITYNMALVCHSLVGSLNVESILNSTKKAFMRLGLHIMHGEGPMDIALHPFPI 180
            LL    +++  ++L    L      E++      AFMRL LHIMHGEGPMDIALHPFPI
Sbjct: 121 -LLSFGRMVSLYLSLFGEEL-KQYQEENVEECFGLAFMRLELHIMHGEGPMDIALHPFPI 174

[Close]

BLAST of CaUC09G174480 vs. ExPASy TrEMBL
Match: A0A1S3C9X7 (Transmembrane protein 230 OS=Cucumis melo OX=3656 GN=LOC103498508 PE=3 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 8.3e-40
Identity = 85/91 (93.41%), Postives = 91/91 (100.00%), Query Frame = 0


Query: 1  MASRRNVRYSSLATDDNDLDSEGSQYDPRFYYTPKAFDKIPWKSIALAVFLLLLGSLLLF 60
          MASRRN+RYSSLA+DDND+DSEGS++DPRFYYTPKAFDKIPWKSIALA+FLLLLGSLLLF
Sbjct: 1  MASRRNIRYSSLASDDNDVDSEGSRFDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLF 60

Query: 61 LSYFVLTGHMAGEKSQAYGLLALGFLTFLPG 92
          LSYFVLTGHMAGEKSQAYGLLALGFLTFLPG
Sbjct: 61 LSYFVLTGHMAGEKSQAYGLLALGFLTFLPG 91

[Close]

BLAST of CaUC09G174480 vs. ExPASy TrEMBL
Match: A0A6J1HAY7 (Transmembrane protein 230 OS=Cucurbita moschata OX=3662 GN=LOC111462418 PE=3 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 1.1e-39
Identity = 87/91 (95.60%), Postives = 88/91 (96.70%), Query Frame = 0


Query: 1  MASRRNVRYSSLATDDNDLDSEGSQYDPRFYYTPKAFDKIPWKSIALAVFLLLLGSLLLF 60
          MASRRNVRYSSLA DDNDLD EGSQYDPRFYYTPKAFDKIPWKSIALA+FLLLLGS LLF
Sbjct: 1  MASRRNVRYSSLAADDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSFLLF 60

Query: 61 LSYFVLTGHMAGEKSQAYGLLALGFLTFLPG 92
          LSYFVLTGHMAGEKSQAYGLLALGFLTFLPG
Sbjct: 61 LSYFVLTGHMAGEKSQAYGLLALGFLTFLPG 91

[Close]

BLAST of CaUC09G174480 vs. ExPASy TrEMBL
Match: A0A6J1JQW3 (Transmembrane protein 230 OS=Cucurbita maxima OX=3661 GN=LOC111487526 PE=3 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 1.4e-39
Identity = 87/91 (95.60%), Postives = 89/91 (97.80%), Query Frame = 0


Query: 1  MASRRNVRYSSLATDDNDLDSEGSQYDPRFYYTPKAFDKIPWKSIALAVFLLLLGSLLLF 60
          MASRR+VRYSSLA DDNDLD EGSQYDPRFYYTPKAFDKIPWKSIALA+FLLLLGSLLLF
Sbjct: 1  MASRRSVRYSSLAADDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSLLLF 60

Query: 61 LSYFVLTGHMAGEKSQAYGLLALGFLTFLPG 92
          LSYFVLTGHMAGEKSQAYGLLALGFLTFLPG
Sbjct: 61 LSYFVLTGHMAGEKSQAYGLLALGFLTFLPG 91

[Close]

BLAST of CaUC09G174480 vs. ExPASy TrEMBL
Match: A0A6J1K312 (Transmembrane protein 230 OS=Cucurbita maxima OX=3661 GN=LOC111489607 PE=3 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 1.6e-38
Identity = 83/91 (91.21%), Postives = 88/91 (96.70%), Query Frame = 0


Query: 1  MASRRNVRYSSLATDDNDLDSEGSQYDPRFYYTPKAFDKIPWKSIALAVFLLLLGSLLLF 60
          MASRRNVRYSSL+TDDNDLD +G+Q+DPRFYYTPKAFDKIPWKSIALA+FLL LGS LLF
Sbjct: 1  MASRRNVRYSSLSTDDNDLDLDGNQFDPRFYYTPKAFDKIPWKSIALAIFLLFLGSFLLF 60

Query: 61 LSYFVLTGHMAGEKSQAYGLLALGFLTFLPG 92
          LSYFVLTGHMAGEKSQAYGLLALGFLTFLPG
Sbjct: 61 LSYFVLTGHMAGEKSQAYGLLALGFLTFLPG 91

[Close]

BLAST of CaUC09G174480 vs. TAIR 10
Match: AT3G29170.1 (Eukaryotic protein of unknown function (DUF872) )

HSP 1 Score: 114.8 bits (286), Expect = 8.8e-26
Identity = 59/96 (61.46%), Postives = 70/96 (72.92%), Query Frame = 0


Query: 1  MASRRNVRYSSLATDDNDLD-----SEGSQYDPRFYYTPKAFDKIPWKSIALAVFLLLLG 60
          MASRR+VRY+ L  D++D        E   +DPRF Y+PKAFD++PWKSIALAVFLL LG
Sbjct: 1  MASRRSVRYAQLPGDEDDEGYGNGVGERRDFDPRFDYSPKAFDRVPWKSIALAVFLLFLG 60

Query: 61 SLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPG 92
           LLL LS+F+  GHM G+ SQ Y LL LG LTFLPG
Sbjct: 61 CLLLLLSFFIFIGHMEGDSSQGYALLVLGILTFLPG 96

The following BLAST results are available for this feature:

BLAST of CaUC09G174480 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0039453.1	5.7e-51	65.93	transmembrane protein 230 [Cucumis melo var. makuwa] >TYK00643.1 transmembrane p...	[more]
XP_023521905.1	7.7e-40	96.70	transmembrane protein 230-like [Cucurbita pepo subsp. pepo] >XP_023521962.1 tran...	[more]
XP_008459349.1	1.7e-39	93.41	PREDICTED: transmembrane protein 230 [Cucumis melo]	[more]
XP_022961740.1	2.2e-39	95.60	transmembrane protein 230-like [Cucurbita moschata] >XP_022961747.1 transmembran...	[more]
XP_022990725.1	2.9e-39	95.60	transmembrane protein 230-like [Cucurbita maxima] >XP_022990726.1 transmembrane ...	[more]

BLAST of CaUC09G174480 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5ZLH4	6.4e-05	37.93	Transmembrane protein 230 OS=Gallus gallus OX=9031 GN=TMEM230 PE=2 SV=1	[more]
Q8CIB6	1.1e-04	37.93	Transmembrane protein 230 OS=Mus musculus OX=10090 GN=Tmem230 PE=1 SV=1	[more]
Q96A57	1.9e-04	37.21	Transmembrane protein 230 OS=Homo sapiens OX=9606 GN=TMEM230 PE=1 SV=1	[more]
Q5BJP5	2.4e-04	36.78	Transmembrane protein 230 OS=Rattus norvegicus OX=10116 GN=Tmem230 PE=1 SV=1	[more]
Q5E975	3.2e-04	36.78	Transmembrane protein 230 OS=Bos taurus OX=9913 GN=TMEM230 PE=2 SV=1	[more]

BLAST of CaUC09G174480 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T915	2.7e-51	65.93	Transmembrane protein 230 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3C9X7	8.3e-40	93.41	Transmembrane protein 230 OS=Cucumis melo OX=3656 GN=LOC103498508 PE=3 SV=1	[more]
A0A6J1HAY7	1.1e-39	95.60	Transmembrane protein 230 OS=Cucurbita moschata OX=3662 GN=LOC111462418 PE=3 SV=...	[more]
A0A6J1JQW3	1.4e-39	95.60	Transmembrane protein 230 OS=Cucurbita maxima OX=3661 GN=LOC111487526 PE=3 SV=1	[more]
A0A6J1K312	1.6e-38	91.21	Transmembrane protein 230 OS=Cucurbita maxima OX=3661 GN=LOC111489607 PE=3 SV=1	[more]

BLAST of CaUC09G174480 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G29170.1	8.8e-26	61.46	Eukaryotic protein of unknown function (DUF872)	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008590	Transmembrane protein 230/134	PFAM	PF05915	DUF872	coord: 40..100 e-value: 1.3E-12 score: 47.9
IPR044234	Transmembrane protein 230	PANTHER	PTHR15664	C20ORF30 PROTEIN	coord: 1..100
None	No IPR available	PANTHER	PTHR15664:SF0	TRANSMEMBRANE PROTEIN 230	coord: 1..100

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC09G174480.1	CaUC09G174480.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005776	autophagosome
cellular_component	GO:0005768	endosome
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane