CaUC09G173410 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC09G173410
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Location	Ciama_Chr09: 31347776 .. 31350830 (-)
RNA-Seq Expression	CaUC09G173410
Synteny	CaUC09G173410

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGAGTGGGAGATTGTAGCGGAGGCAGTGAGAGGAAAGGAAGGCGTTGTTGTTGGTAGGCTACACAATCAAAAACCAATGTCTTCCTCAAGAGCTCCCCCCAACGGCCTCCACCCTCGCTACAACCCCAGATCCTCCTCCTCCGCCTCCTTCAAAGGCTGCTGCTGCTGCCTCTTCCTCCTCTTCTCCTTTCTCGCCCTCTTAATCCTCGCTGTCGTCCTCGTCGTCGTACTCGCTCTCAAACCCAAAAAACCCCAGTTCGATCTCCAGCAGGTCGGCGTCCAGTACATGGGCATAACCAATCCCAATCCCACCACTGCCTCTCTTTCCCTCAACATTCGGATGATTTTCACCGCCGTTAACCCTAACAAAGTCGGAATCAAGTACGGCGAGTCCCGGTTCACGGTTATGTACCGAGGAATTCCGCTTGGGAGAGCCTCCGTTCCCGGATTCTTTCAAGACCCTCACAGCCAGCGCCAGGTCGATGCTACCATCGCCGTCGATCGCGTTAATCTCCTTCAGGCTGACGCTGCCGATTTGATCCGTGATGCCTCGTTGAACGACCGCGTCGAGCTTAGAATACTCGGCGATGTTGCTGCTAAGATCCGCCTCTTGTCCTTCAATTCCCCCGGCGTTCAGGTACTACTACTCTCTCTACTTCGCCTCTCTGCTTTAGGGACATCCTTGTAATTTCCCCATTTTTCTCCTTTTTTTTTCTTTTTAAAATTAATTTTAATTCCCAACATTTCTTAATTCTGAATGCACAATTAAAAGTAGATAACACTTGGGTTGAATTTTAGGATATTGCTTTGAATTTTATGGTTGCGTTGTTGATAATTGTAATTGAAATTGGTTTTTTTTTGTTTCCCTTAGGAAGTCAAACAATATGAAAGTGGAAGAAAAGGGGAAAATTTTGAAAAAACTAGCAATGAAAAGGGTTTCTTTTGGCAAAAACTCTTTTCTATTTTGTCCTTCTTGTTTAAGTGGGTGGCATACTTGTGAGTTAAGGATTTGGATGGAAGTGATCTGGACTGTCTGTCTTTCATTGTTTTTGTTCTTTTAAAATTTTGAGAGCATTTTTTCTGTTAATTATATATATATATATATATATATATATTGGATGAATATAGAGTTGTAAAGAAGTTTATGATTGGATGAATATAGAGTGGTGACAAATTGAAGAAAGTCGAAAATAGAGGGAAAGCGACAACAGAAACTAGCATCCTTTTCTTTCGTATTTGCTTTACTTTCACGCCCATTTTTTTCTGAACGCACTATAACACATTTCTTTTTTAAAAAAAACAAAAAAAAGGACTAAATAGCTTTTGCTTTGAACTGTTTCCAGTTATTTTATAACGAATTAGCTTCTTCTGAATCTTTGATTCTATTGATCAAGACATTAGGTTCAAATTGTATTGCAAACAAAATAGAACAAAAGAGAGATATATGTTATTATTTTTTTCTCTTTTGAAAAAAAAAAAAAATCTTTATTTAGTTTTCATTTGGCCCTTAGGTTTTCACTTAGTCCCTTGGTTTTAGGGTATTACAATTTTAGCTTTGAGATTTGAGTTTTCTTTAAATTTTAGTTGAATGGTTTCAAGATTTATACCTTAACCTTGATTTTTTTTTACTAAATACTCACTTTTTGTCTTCGGTGTTAATGTCTATTAATTGATTTAAAATAATTATGAAGTTAAATTTTAATTTGATTTTAATAGTGGTGAAAATTAATTATAAGTTTTAAAATTATTTCATAGACATTAACATTAATGGCGAAAAGTGAGTATTTAGTGAAAAATTAAGGTTAAAAGTGTAAATTTTAAAATCTCTAGACCAAACTGAAATAAAACTCAATTCTCAAAGGTAAAATTGTAATATTTTGAAACCTTTCCTAAATTGCATCCAAACTCAAGAACTAAAAGTGAGATATTTTGAGACGGGGCCAAATGAAAATTAAACCCAAAACATAGGGAAAAAAAAGTTATTGTTTTTTTGGTTTTTTTTTCTTTTTCTATGACATGAAGCCTAATTTTTACCTTGTAATTAGATGAAATGCTTGGGCTCGTATTTATTATTATTTTTTTATTTCTAGTTTTTGAAAATTAAGTCTATTTTCTCTCATTTCTATAACATAGTTTTCATCTTTCTTAAATAAAAGAGTATAATTCTTAGCCAAATTTCAAAAACAAGTTTTTTAAAAACTACTTATAGTGTTTGAAAGATTAATTGCATTAGGTAGCACTTTTAGGGCTAATAATTAAGTGTTTAGCAATATTTTTAAATAATCGCAAATATAGAAAAAACTATCTGTGATAGTATTGATAGACTCCTTTCACAATATAGTCTATCTTTGTTAGACTCCAAAAGCTATACCTAAATTTTGTTATATCTATACATTTTTTTTTACATCGTGTGATATATTTTGGGTATGATTGTTATATATTATATGTATGTTGATTGTGAATCTAATTTAGAGAGACAAAAGAGACGGAGAGAGAGAGAGGAATGGTGACAGCTAATTTTGAAAGCCCTAAAGTTGCATTATTTAGGATGAAAGCAACTTCTGGATCATTCCACCCCCCATGTGACTTTTGGATGAATCTCTCTTCCCATTTCATTTCCATTTCTTTGAACTATAATATTATGTTATACTATTTACAATATCACATTCAATTATTTACATTGCCCTTTTTCTTTTTGGGAAAATGTATAGGTTTCAGTAGATTGTGCAATTGTGATTAGTCCAAGAAAGCAGTCTCTCACATACAAGCAATGTGGTTTTGATGGCTTAAATGTATGACTCTCATCCCTTCATTCAGCTTCTATCTCTCTCCCCTTTTAGATTCAAAATCATTATTCATTCATTAGTTTCGTCTTTCGATTATTTCATTTTGGTCCCTACCTAATTAATCAATCTAGTCCTTAAGATGAGGATTGAAATGGTTGTGGAATTGGGGATTAAATTGAATTCATCAAAATTTTTTGGAAAGACGAAATTAATAAATGGATAACAATTTGTAGAGAGTGTAATTTCTTGAGAGAGATTAGAAGAAA

mRNA sequence

ATGCGAATTGTAGCGGAGGCAGTGAGAGGAAAGGAAGGCGTTGTTGTTGGTAGGCTACACAATCAAAAACCAATGTCTTCCTCAAGAGCTCCCCCCAACGGCCTCCACCCTCGCTACAACCCCAGATCCTCCTCCTCCGCCTCCTTCAAAGGCTGCTGCTGCTGCCTCTTCCTCCTCTTCTCCTTTCTCGCCCTCTTAATCCTCGCTGTCGTCCTCGTCGTCGTACTCGCTCTCAAACCCAAAAAACCCCAGTTCGATCTCCAGCAGGTCGGCGTCCAGTACATGGGCATAACCAATCCCAATCCCACCACTGCCTCTCTTTCCCTCAACATTCGGATGATTTTCACCGCCGTTAACCCTAACAAAGTCGGAATCAAGTACGGCGAGTCCCGGTTCACGGTTATGTACCGAGGAATTCCGCTTGGGAGAGCCTCCGTTCCCGGATTCTTTCAAGACCCTCACAGCCAGCGCCAGGTCGATGCTACCATCGCCGTCGATCGCGTTAATCTCCTTCAGGCTGACGCTGCCGATTTGATCCGTGATGCCTCGTTGAACGACCGCGTCGAGCTTAGAATACTCGGCGATGTTGCTGCTAAGATCCGCCTCTTGTCCTTCAATTCCCCCGGCGTTCAGGTTTCAGTAGATTGTGCAATTGTGATTAGTCCAAGAAAGCAGTCTCTCACATACAAGCAATGTGGTTTTGATGGCTTAAATGTATGACTCTCATCCCTTCATTCAGCTTCTATCTCTCTCCCCTTTTAGATTCAAAATCATTATTCATTCATTAGTTTCGTCTTTCGATTATTTCATTTTGGTCCCTACCTAATTAATCAATCTAGTCCTTAAGATGAGGATTGAAATGGTTGTGGAATTGGGGATTAAATTGAATTCATCAAAATTTTTTGGAAAGACGAAATTAATAAATGGATAACAATTTGTAGAGAGTGTAATTTCTTGAGAGAGATTAGAAGAAA

Coding sequence (CDS)

ATGCGAATTGTAGCGGAGGCAGTGAGAGGAAAGGAAGGCGTTGTTGTTGGTAGGCTACACAATCAAAAACCAATGTCTTCCTCAAGAGCTCCCCCCAACGGCCTCCACCCTCGCTACAACCCCAGATCCTCCTCCTCCGCCTCCTTCAAAGGCTGCTGCTGCTGCCTCTTCCTCCTCTTCTCCTTTCTCGCCCTCTTAATCCTCGCTGTCGTCCTCGTCGTCGTACTCGCTCTCAAACCCAAAAAACCCCAGTTCGATCTCCAGCAGGTCGGCGTCCAGTACATGGGCATAACCAATCCCAATCCCACCACTGCCTCTCTTTCCCTCAACATTCGGATGATTTTCACCGCCGTTAACCCTAACAAAGTCGGAATCAAGTACGGCGAGTCCCGGTTCACGGTTATGTACCGAGGAATTCCGCTTGGGAGAGCCTCCGTTCCCGGATTCTTTCAAGACCCTCACAGCCAGCGCCAGGTCGATGCTACCATCGCCGTCGATCGCGTTAATCTCCTTCAGGCTGACGCTGCCGATTTGATCCGTGATGCCTCGTTGAACGACCGCGTCGAGCTTAGAATACTCGGCGATGTTGCTGCTAAGATCCGCCTCTTGTCCTTCAATTCCCCCGGCGTTCAGGTTTCAGTAGATTGTGCAATTGTGATTAGTCCAAGAAAGCAGTCTCTCACATACAAGCAATGTGGTTTTGATGGCTTAAATGTATGA

Protein sequence

MRIVAEAVRGKEGVVVGRLHNQKPMSSSRAPPNGLHPRYNPRSSSSASFKGCCCCLFLLFSFLALLILAVVLVVVLALKPKKPQFDLQQVGVQYMGITNPNPTTASLSLNIRMIFTAVNPNKVGIKYGESRFTVMYRGIPLGRASVPGFFQDPHSQRQVDATIAVDRVNLLQADAADLIRDASLNDRVELRILGDVAAKIRLLSFNSPGVQVSVDCAIVISPRKQSLTYKQCGFDGLNV

Homology

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BLAST of CaUC09G173410 vs. NCBI nr
Match: XP_038887420.1 (uncharacterized protein LOC120077562 [Benincasa hispida])

HSP 1 Score: 412.9 bits (1060), Expect = 1.9e-111
Identity = 211/215 (98.14%), Postives = 213/215 (99.07%), Query Frame = 0


Query: 25  MSSSRAPPNGLHPRYNPRSSSSASFKGCCCCLFLLFSFLALLILAVVLVVVLALKPKKPQ 84
           MSSSR  PNG+HPRYNPRSSSSASFKGCCCCLFLLFSFLALLILA+VLVVVLALKPKKPQ
Sbjct: 1   MSSSRTAPNGMHPRYNPRSSSSASFKGCCCCLFLLFSFLALLILAIVLVVVLALKPKKPQ 60

Query: 85  FDLQQVGVQYMGITNPNPTTASLSLNIRMIFTAVNPNKVGIKYGESRFTVMYRGIPLGRA 144
           FDLQQVGVQYMGITNPNPTTASLSLNIRMIFTAVNPNKVGIKYGESRFTVMYRGIPLGRA
Sbjct: 61  FDLQQVGVQYMGITNPNPTTASLSLNIRMIFTAVNPNKVGIKYGESRFTVMYRGIPLGRA 120

Query: 145 SVPGFFQDPHSQRQVDATIAVDRVNLLQADAADLIRDASLNDRVELRILGDVAAKIRLLS 204
           SVPGFFQDPHSQRQVDATIAVDRVNLLQADAADLIRDASLNDRVELRILGDVAAKIRLLS
Sbjct: 121 SVPGFFQDPHSQRQVDATIAVDRVNLLQADAADLIRDASLNDRVELRILGDVAAKIRLLS 180

Query: 205 FNSPGVQVSVDCAIVISPRKQSLTYKQCGFDGLNV 240
           FNSPGVQVSVDCAIVISPRKQSLTYKQCGFDGLNV
Sbjct: 181 FNSPGVQVSVDCAIVISPRKQSLTYKQCGFDGLNV 215

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BLAST of CaUC09G173410 vs. NCBI nr
Match: XP_008447191.1 (PREDICTED: uncharacterized protein LOC103489700 [Cucumis melo])

HSP 1 Score: 402.5 bits (1033), Expect = 2.5e-108
Identity = 210/224 (93.75%), Postives = 215/224 (95.98%), Query Frame = 0


Query: 18  RLHNQKPM-SSSRAPPNGLHPRYNPR-SSSSASFKGCCCCLFLLFSFLALLILAVVLVVV 77
           +  NQ  M SSSR  PNG+HPRYNPR SSSSA+FKGCCCCLFLLFSFLALL+LA+VLVVV
Sbjct: 47  KFQNQSAMSSSSRTVPNGVHPRYNPRSSSSSATFKGCCCCLFLLFSFLALLVLAIVLVVV 106

Query: 78  LALKPKKPQFDLQQVGVQYMGITNPNPTTASLSLNIRMIFTAVNPNKVGIKYGESRFTVM 137
           LALKPKKPQFDLQQVGVQYMGITNPNPTTASLSLNIRMIFTAVNPNKVGIKY ESRFTVM
Sbjct: 107 LALKPKKPQFDLQQVGVQYMGITNPNPTTASLSLNIRMIFTAVNPNKVGIKYEESRFTVM 166

Query: 138 YRGIPLGRASVPGFFQDPHSQRQVDATIAVDRVNLLQADAADLIRDASLNDRVELRILGD 197
           YRGIPLGRASVPGFFQDPHSQRQVDATIAVDRVNLLQADAADLIRDASLNDRVELRILGD
Sbjct: 167 YRGIPLGRASVPGFFQDPHSQRQVDATIAVDRVNLLQADAADLIRDASLNDRVELRILGD 226

Query: 198 VAAKIRLLSFNSPGVQVSVDCAIVISPRKQSLTYKQCGFDGLNV 240
           VAAKIRLLSFNSPGVQVSVDCAIVISPRKQSLTYKQCGFDGLNV
Sbjct: 227 VAAKIRLLSFNSPGVQVSVDCAIVISPRKQSLTYKQCGFDGLNV 270

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BLAST of CaUC09G173410 vs. NCBI nr
Match: XP_004139805.1 (uncharacterized protein LOC101207234 [Cucumis sativus] >KGN44209.1 hypothetical protein Csa_016262 [Cucumis sativus])

HSP 1 Score: 396.4 bits (1017), Expect = 1.8e-106
Identity = 205/215 (95.35%), Postives = 210/215 (97.67%), Query Frame = 0


Query: 26  SSSRAPPNGLHPRYNPR-SSSSASFKGCCCCLFLLFSFLALLILAVVLVVVLALKPKKPQ 85
           SSSR  PNG+HPRYNPR SSSSA+FKGCCCCLFLLFSFLALL+LA+VLVVVLALKPKKPQ
Sbjct: 3   SSSRTVPNGVHPRYNPRSSSSSATFKGCCCCLFLLFSFLALLVLAIVLVVVLALKPKKPQ 62

Query: 86  FDLQQVGVQYMGITNPNPTTASLSLNIRMIFTAVNPNKVGIKYGESRFTVMYRGIPLGRA 145
           FDLQQV VQY+GITNPNPTTASLSLNIRMIFTAVNPNKVGIKY ESRFTVMYRGIPLGRA
Sbjct: 63  FDLQQVKVQYVGITNPNPTTASLSLNIRMIFTAVNPNKVGIKYEESRFTVMYRGIPLGRA 122

Query: 146 SVPGFFQDPHSQRQVDATIAVDRVNLLQADAADLIRDASLNDRVELRILGDVAAKIRLLS 205
           SVPGFFQDPHSQRQVDATIAVDRVNLLQADAADLIRDASLNDRVELRILGDVAAKIRLLS
Sbjct: 123 SVPGFFQDPHSQRQVDATIAVDRVNLLQADAADLIRDASLNDRVELRILGDVAAKIRLLS 182

Query: 206 FNSPGVQVSVDCAIVISPRKQSLTYKQCGFDGLNV 240
           FNSPGVQVSVDCAIVISPRKQSLTYKQCGFDGLNV
Sbjct: 183 FNSPGVQVSVDCAIVISPRKQSLTYKQCGFDGLNV 217

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BLAST of CaUC09G173410 vs. NCBI nr
Match: XP_022971998.1 (uncharacterized protein LOC111470648 [Cucurbita maxima])

HSP 1 Score: 378.3 bits (970), Expect = 5.1e-101
Identity = 198/215 (92.09%), Postives = 203/215 (94.42%), Query Frame = 0


Query: 25  MSSSRAPPNGLHPRYNPRSSSSASFKGCCCCLFLLFSFLALLILAVVLVVVLALKPKKPQ 84
           M SSR   +   P Y PRSSSSASFKGCCCCLFLLFSFLALLILAVVLVVVLALKPKKPQ
Sbjct: 1   MPSSRGATHS-RPPYIPRSSSSASFKGCCCCLFLLFSFLALLILAVVLVVVLALKPKKPQ 60

Query: 85  FDLQQVGVQYMGITNPNPTTASLSLNIRMIFTAVNPNKVGIKYGESRFTVMYRGIPLGRA 144
           FDLQQVG+QYM IT PNPT ASLSLNIRMIFTAVNPNKVGIKYGESRFTVMYRGIPLGRA
Sbjct: 61  FDLQQVGIQYMNITTPNPTAASLSLNIRMIFTAVNPNKVGIKYGESRFTVMYRGIPLGRA 120

Query: 145 SVPGFFQDPHSQRQVDATIAVDRVNLLQADAADLIRDASLNDRVELRILGDVAAKIRLLS 204
           S+PGFFQDPHSQRQVDATIAVDRV+LLQADAADLIRDASLNDRVELRILGDVAAKIRLLS
Sbjct: 121 SIPGFFQDPHSQRQVDATIAVDRVSLLQADAADLIRDASLNDRVELRILGDVAAKIRLLS 180

Query: 205 FNSPGVQVSVDCAIVISPRKQSLTYKQCGFDGLNV 240
           F+SPGVQVSVDCAIVISPRKQSLTYKQCGFDGLNV
Sbjct: 181 FDSPGVQVSVDCAIVISPRKQSLTYKQCGFDGLNV 214

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BLAST of CaUC09G173410 vs. NCBI nr
Match: KAG6571818.1 (NDR1/HIN1-like protein 13, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 373.2 bits (957), Expect = 1.6e-99
Identity = 198/216 (91.67%), Postives = 202/216 (93.52%), Query Frame = 0


Query: 25  MSSSRAPPNGLHPRYNPR-SSSSASFKGCCCCLFLLFSFLALLILAVVLVVVLALKPKKP 84
           M SSR       P Y PR SSSSASFKGCCCCLFLLFSFLALLILAVVLVVVLALKPKKP
Sbjct: 1   MPSSRGAAQS-RPPYIPRSSSSSASFKGCCCCLFLLFSFLALLILAVVLVVVLALKPKKP 60

Query: 85  QFDLQQVGVQYMGITNPNPTTASLSLNIRMIFTAVNPNKVGIKYGESRFTVMYRGIPLGR 144
           QFDLQQVG+QYM IT PNPT ASLSLNIRMIFTAVNPNKVGIKYGESRFTVMYRGIPLGR
Sbjct: 61  QFDLQQVGIQYMNITTPNPTAASLSLNIRMIFTAVNPNKVGIKYGESRFTVMYRGIPLGR 120

Query: 145 ASVPGFFQDPHSQRQVDATIAVDRVNLLQADAADLIRDASLNDRVELRILGDVAAKIRLL 204
           AS+PGFFQDPHSQRQVDATIAVDRV+LLQADAADLIRDASLNDRVELRILGDVAAKIRLL
Sbjct: 121 ASIPGFFQDPHSQRQVDATIAVDRVSLLQADAADLIRDASLNDRVELRILGDVAAKIRLL 180

Query: 205 SFNSPGVQVSVDCAIVISPRKQSLTYKQCGFDGLNV 240
           SF+SPGVQVSVDCAIVISPRKQSLTYKQCGFDGLNV
Sbjct: 181 SFDSPGVQVSVDCAIVISPRKQSLTYKQCGFDGLNV 215

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BLAST of CaUC09G173410 vs. ExPASy Swiss-Prot
Match: Q9FI03 (NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 7.8e-04
Identity = 39/168 (23.21%), Postives = 83/168 (49.40%), Query Frame = 0


Query: 56  LFLLFSFLALLILAVVLVVVLALKPKKPQFDLQQVGVQYMGITNPNPTTASLSLNIRMIF 115
           LF  FS     +L ++ +V L L P++P+F L +  +  + +T    +T  L+ ++++  
Sbjct: 27  LFFTFSTFFSGLLLIIFLVWLILHPERPEFSLTEADIYSLNLT--TSSTHLLNSSVQLTL 86

Query: 116 TAVNPN-KVGIKYGESRFTVMYRGIPL-GRASVPGFFQDPHSQRQVDATIAVDRVNLLQA 175
            + NPN KVGI Y +      YRG  +   AS+P F+Q       + A +    + + Q+
Sbjct: 87  FSKNPNKKVGIYYDKLLVYAAYRGQQITSEASLPPFYQSHEEINLLTAFLQGTELPVAQS 146

Query: 176 DAADLIRDASLNDRVELRILGDVAAKIRLLSFNSPGVQVSVDCAIVIS 222
               + R+ S   ++ + +  D   + ++ ++ S   + +V+C  +++
Sbjct: 147 FGYQISRERS-TGKIIIGMKMDGKLRWKIGTWVSGAYRFNVNCLAIVA 191

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BLAST of CaUC09G173410 vs. ExPASy TrEMBL
Match: A0A1S3BGU8 (uncharacterized protein LOC103489700 OS=Cucumis melo OX=3656 GN=LOC103489700 PE=4 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 1.2e-108
Identity = 210/224 (93.75%), Postives = 215/224 (95.98%), Query Frame = 0


Query: 18  RLHNQKPM-SSSRAPPNGLHPRYNPR-SSSSASFKGCCCCLFLLFSFLALLILAVVLVVV 77
           +  NQ  M SSSR  PNG+HPRYNPR SSSSA+FKGCCCCLFLLFSFLALL+LA+VLVVV
Sbjct: 47  KFQNQSAMSSSSRTVPNGVHPRYNPRSSSSSATFKGCCCCLFLLFSFLALLVLAIVLVVV 106

Query: 78  LALKPKKPQFDLQQVGVQYMGITNPNPTTASLSLNIRMIFTAVNPNKVGIKYGESRFTVM 137
           LALKPKKPQFDLQQVGVQYMGITNPNPTTASLSLNIRMIFTAVNPNKVGIKY ESRFTVM
Sbjct: 107 LALKPKKPQFDLQQVGVQYMGITNPNPTTASLSLNIRMIFTAVNPNKVGIKYEESRFTVM 166

Query: 138 YRGIPLGRASVPGFFQDPHSQRQVDATIAVDRVNLLQADAADLIRDASLNDRVELRILGD 197
           YRGIPLGRASVPGFFQDPHSQRQVDATIAVDRVNLLQADAADLIRDASLNDRVELRILGD
Sbjct: 167 YRGIPLGRASVPGFFQDPHSQRQVDATIAVDRVNLLQADAADLIRDASLNDRVELRILGD 226

Query: 198 VAAKIRLLSFNSPGVQVSVDCAIVISPRKQSLTYKQCGFDGLNV 240
           VAAKIRLLSFNSPGVQVSVDCAIVISPRKQSLTYKQCGFDGLNV
Sbjct: 227 VAAKIRLLSFNSPGVQVSVDCAIVISPRKQSLTYKQCGFDGLNV 270

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BLAST of CaUC09G173410 vs. ExPASy TrEMBL
Match: A0A0A0K5H7 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G223380 PE=4 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 8.7e-107
Identity = 205/215 (95.35%), Postives = 210/215 (97.67%), Query Frame = 0


Query: 26  SSSRAPPNGLHPRYNPR-SSSSASFKGCCCCLFLLFSFLALLILAVVLVVVLALKPKKPQ 85
           SSSR  PNG+HPRYNPR SSSSA+FKGCCCCLFLLFSFLALL+LA+VLVVVLALKPKKPQ
Sbjct: 3   SSSRTVPNGVHPRYNPRSSSSSATFKGCCCCLFLLFSFLALLVLAIVLVVVLALKPKKPQ 62

Query: 86  FDLQQVGVQYMGITNPNPTTASLSLNIRMIFTAVNPNKVGIKYGESRFTVMYRGIPLGRA 145
           FDLQQV VQY+GITNPNPTTASLSLNIRMIFTAVNPNKVGIKY ESRFTVMYRGIPLGRA
Sbjct: 63  FDLQQVKVQYVGITNPNPTTASLSLNIRMIFTAVNPNKVGIKYEESRFTVMYRGIPLGRA 122

Query: 146 SVPGFFQDPHSQRQVDATIAVDRVNLLQADAADLIRDASLNDRVELRILGDVAAKIRLLS 205
           SVPGFFQDPHSQRQVDATIAVDRVNLLQADAADLIRDASLNDRVELRILGDVAAKIRLLS
Sbjct: 123 SVPGFFQDPHSQRQVDATIAVDRVNLLQADAADLIRDASLNDRVELRILGDVAAKIRLLS 182

Query: 206 FNSPGVQVSVDCAIVISPRKQSLTYKQCGFDGLNV 240
           FNSPGVQVSVDCAIVISPRKQSLTYKQCGFDGLNV
Sbjct: 183 FNSPGVQVSVDCAIVISPRKQSLTYKQCGFDGLNV 217

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BLAST of CaUC09G173410 vs. ExPASy TrEMBL
Match: A0A6J1I8L5 (uncharacterized protein LOC111470648 OS=Cucurbita maxima OX=3661 GN=LOC111470648 PE=4 SV=1)

HSP 1 Score: 378.3 bits (970), Expect = 2.5e-101
Identity = 198/215 (92.09%), Postives = 203/215 (94.42%), Query Frame = 0


Query: 25  MSSSRAPPNGLHPRYNPRSSSSASFKGCCCCLFLLFSFLALLILAVVLVVVLALKPKKPQ 84
           M SSR   +   P Y PRSSSSASFKGCCCCLFLLFSFLALLILAVVLVVVLALKPKKPQ
Sbjct: 1   MPSSRGATHS-RPPYIPRSSSSASFKGCCCCLFLLFSFLALLILAVVLVVVLALKPKKPQ 60

Query: 85  FDLQQVGVQYMGITNPNPTTASLSLNIRMIFTAVNPNKVGIKYGESRFTVMYRGIPLGRA 144
           FDLQQVG+QYM IT PNPT ASLSLNIRMIFTAVNPNKVGIKYGESRFTVMYRGIPLGRA
Sbjct: 61  FDLQQVGIQYMNITTPNPTAASLSLNIRMIFTAVNPNKVGIKYGESRFTVMYRGIPLGRA 120

Query: 145 SVPGFFQDPHSQRQVDATIAVDRVNLLQADAADLIRDASLNDRVELRILGDVAAKIRLLS 204
           S+PGFFQDPHSQRQVDATIAVDRV+LLQADAADLIRDASLNDRVELRILGDVAAKIRLLS
Sbjct: 121 SIPGFFQDPHSQRQVDATIAVDRVSLLQADAADLIRDASLNDRVELRILGDVAAKIRLLS 180

Query: 205 FNSPGVQVSVDCAIVISPRKQSLTYKQCGFDGLNV 240
           F+SPGVQVSVDCAIVISPRKQSLTYKQCGFDGLNV
Sbjct: 181 FDSPGVQVSVDCAIVISPRKQSLTYKQCGFDGLNV 214

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BLAST of CaUC09G173410 vs. ExPASy TrEMBL
Match: A0A6J1GKY5 (uncharacterized protein LOC111455278 OS=Cucurbita moschata OX=3662 GN=LOC111455278 PE=4 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 3.3e-98
Identity = 196/219 (89.50%), Postives = 202/219 (92.24%), Query Frame = 0


Query: 22  QKPMSSSRAPPNGLHPRYNPR-SSSSASFKGCCCCLFLLFSFLALLILAVVLVVVLALKP 81
           +K M  SR       P Y PR SSSSASFKGCCCCLFLLFSFLALLILAVVLVVVLALKP
Sbjct: 19  RKDMPLSRGAAQS-RPPYIPRSSSSSASFKGCCCCLFLLFSFLALLILAVVLVVVLALKP 78

Query: 82  KKPQFDLQQVGVQYMGITNPNPTTASLSLNIRMIFTAVNPNKVGIKYGESRFTVMYRGIP 141
           KKPQFDLQQVG+QYM IT PNPT ASLSL+IRMIFTAVNPNKVGIKYGESRFTVMYRGIP
Sbjct: 79  KKPQFDLQQVGIQYMNITTPNPTAASLSLDIRMIFTAVNPNKVGIKYGESRFTVMYRGIP 138

Query: 142 LGRASVPGFFQDPHSQRQVDATIAVDRVNLLQADAADLIRDASLNDRVELRILGDVAAKI 201
           LGRAS+PGFFQDPHSQRQVDATIAVDRV+LLQADAADLIRDASLNDRVELRILGDVAAKI
Sbjct: 139 LGRASIPGFFQDPHSQRQVDATIAVDRVSLLQADAADLIRDASLNDRVELRILGDVAAKI 198

Query: 202 RLLSFNSPGVQVSVDCAIVISPRKQSLTYKQCGFDGLNV 240
           RLLSF+SPGVQV VDCAIVISPRKQSLTYKQCGFDGLNV
Sbjct: 199 RLLSFDSPGVQVWVDCAIVISPRKQSLTYKQCGFDGLNV 236

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BLAST of CaUC09G173410 vs. ExPASy TrEMBL
Match: A0A6J1EUX4 (uncharacterized protein LOC111437836 OS=Cucurbita moschata OX=3662 GN=LOC111437836 PE=4 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 1.6e-97
Identity = 198/227 (87.22%), Postives = 205/227 (90.31%), Query Frame = 0


Query: 26  SSSRAPPNGL--------HPRYNPRSS--SSASFKGCCCCLFLLFSFLALLILAVVLVVV 85
           S+SR  PNG         HP Y+PRSS  SSASFKGCCCCLFLL SFLALL+LAVVLVVV
Sbjct: 6   STSRPLPNGTLSTSTHRHHPPYSPRSSSFSSASFKGCCCCLFLLLSFLALLVLAVVLVVV 65

Query: 86  LALKPKKPQFDLQQVGVQYMGITNPN-PTT--ASLSLNIRMIFTAVNPNKVGIKYGESRF 145
           LALKPKKPQFDLQQVGVQYMGIT PN PTT  ASLSLNIRM+FTAVNPNKVGIKY ESRF
Sbjct: 66  LALKPKKPQFDLQQVGVQYMGITTPNTPTTPMASLSLNIRMVFTAVNPNKVGIKYSESRF 125

Query: 146 TVMYRGIPLGRASVPGFFQDPHSQRQVDATIAVDRVNLLQADAADLIRDASLNDRVELRI 205
           TVMYRGIPLGRASVPGF Q+PHSQRQVD T+AVDRVNLLQADAADLIRDASLNDRVELRI
Sbjct: 126 TVMYRGIPLGRASVPGFVQEPHSQRQVDTTVAVDRVNLLQADAADLIRDASLNDRVELRI 185

Query: 206 LGDVAAKIRLLSFNSPGVQVSVDCAIVISPRKQSLTYKQCGFDGLNV 240
           LGDVAAKIRLLSFNSPGVQVSVDCAIVISPRKQSLTYKQCGFDGL+V
Sbjct: 186 LGDVAAKIRLLSFNSPGVQVSVDCAIVISPRKQSLTYKQCGFDGLSV 232

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BLAST of CaUC09G173410 vs. TAIR 10
Match: AT2G01080.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 314.7 bits (805), Expect = 6.4e-86
Identity = 166/228 (72.81%), Postives = 192/228 (84.21%), Query Frame = 0


Query: 24  PMSSSRAPPNG-------LHPRYNP-RSSSSASFKGCCCCLFLLFSFLALLILAVVLVVV 83
           P SSSRA  NG         P Y    SSSSAS KGCCCCLFLLF+FLALL+LAVVL+V+
Sbjct: 4   PPSSSRAGLNGDPIAAQNQQPYYRSYSSSSSASLKGCCCCLFLLFAFLALLVLAVVLIVI 63

Query: 84  LALKPKKPQFDLQQVGVQYMGITNP----NPTTASLSLNIRMIFTAVNPNKVGIKYGESR 143
           LA+KPKKPQFDLQQV V YMGI+NP    +PTTASLSL IRM+FTAVNPNKVGI+YGES 
Sbjct: 64  LAVKPKKPQFDLQQVAVVYMGISNPSAVLDPTTASLSLTIRMLFTAVNPNKVGIRYGESS 123

Query: 144 FTVMYRGIPLGRASVPGFFQDPHSQRQVDATIAVDRVNLLQADAADLIRDASLNDRVELR 203
           FTVMY+G+PLGRA+VPGF+QD HS + V+ATI+VDRVNL+QA AADL+RDASLNDRVEL 
Sbjct: 124 FTVMYKGMPLGRATVPGFYQDAHSTKNVEATISVDRVNLMQAHAADLVRDASLNDRVELT 183

Query: 204 ILGDVAAKIRLLSFNSPGVQVSVDCAIVISPRKQSLTYKQCGFDGLNV 240
           + GDV AKIR+++F+SPGVQVSV+C I ISPRKQ+L YKQCGFDGL+V
Sbjct: 184 VRGDVGAKIRVMNFDSPGVQVSVNCGIGISPRKQALIYKQCGFDGLSV 231

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BLAST of CaUC09G173410 vs. TAIR 10
Match: AT3G54200.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 54.7 bits (130), Expect = 1.2e-07
Identity = 52/220 (23.64%), Postives = 97/220 (44.09%), Query Frame = 0


Query: 22  QKPMSSSRAPPNGLHPRYNPRSSSSASFKGC----CCCLFLLFSFLALLILAVVLVVV-- 81
           +KP ++   PP         +S+++ + K       C + + F+ L +L++A+V+V++  
Sbjct: 15  EKPATAMLPPPKPNASSMETQSANTGTAKKLRRKRNCKICICFTILLILLIAIVIVILAF 74

Query: 82  LALKPKKPQFDLQQVGV-QYMGITNPNPTTASLSLNIRMIFTAVNPNKVGIKYGESRFTV 141
              KPK+P   +  V V +     NP      L+L + +  +  NPN++G  Y  S   +
Sbjct: 75  TLFKPKRPTTTIDSVTVDRLQASVNPLLLKVLLNLTLNVDLSLKNPNRIGFSYDSSSALL 134

Query: 142 MYRGIPLGRASVPGFFQDPHSQRQVDATIAVDRVNLLQADAADLIRDASLNDRVELRILG 201
            YRG  +G A +P           ++ T+ +    LL      L+ D  +   + L    
Sbjct: 135 NYRGQVIGEAPLPANRIAARKTVPLNITLTLMADRLL--SETQLLSDV-MAGVIPLNTFV 194

Query: 202 DVAAKIRLLSFNSPGVQVSVDCAIVISPRKQSLTYKQCGF 235
            V  K+ +L      VQ S  C + IS   +++T + C +
Sbjct: 195 KVTGKVTVLKIFKIKVQSSSSCDLSISVSDRNVTSQHCKY 231

[Close]

BLAST of CaUC09G173410 vs. TAIR 10
Match: AT1G17620.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 54.3 bits (129), Expect = 1.6e-07
Identity = 50/212 (23.58%), Postives = 100/212 (47.17%), Query Frame = 0


Query: 33  NGLHPRYNPRSS--SSASFKGCC--CCLFLLFSFLALLIL--AVVLVVVLALKPKKPQFD 92
           N   P Y P +    ++  +GCC  CC + +F  + LL++  A   VV L  +P++P F 
Sbjct: 36  NANRPAYRPPAGRRRTSHTRGCCCRCCCWTIFVIILLLLIVAAASAVVYLIYRPQRPSFT 95

Query: 93  LQQVGVQYMGITNPNPTTASLSLNIRMIFTAVNPNK-VGIKYGESRFTVMYRG------- 152
           + ++ +  +  T+    T ++SL++     A NPNK VG  Y  +  T +Y+        
Sbjct: 96  VSELKISTLNFTSAVRLTTAISLSV----IARNPNKNVGFIYDVTDIT-LYKASTGGDDD 155

Query: 153 IPLGRASVPGFFQDPHSQRQVDATIAVDRVNLLQADAADLIRDASLNDRVELRILGDVAA 212
           + +G+ ++  F     +   + +TI      L +  A  L  D      V ++I+ +   
Sbjct: 156 VVIGKGTIAAFSHGKKNTTTLRSTIGSPPDELDEISAGKLKGDLKAKKAVAIKIVLNSKV 215

Query: 213 KIRLLSFNSP--GVQVSVDCAIVISPRKQSLT 229
           K+++ +  +P  G++V+ +   V++P  +  T
Sbjct: 216 KVKMGALKTPKSGIRVTCEGIKVVAPTGKKAT 242

[Close]

BLAST of CaUC09G173410 vs. TAIR 10
Match: AT5G53730.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 45.8 bits (107), Expect = 5.6e-05
Identity = 39/168 (23.21%), Postives = 83/168 (49.40%), Query Frame = 0


Query: 56  LFLLFSFLALLILAVVLVVVLALKPKKPQFDLQQVGVQYMGITNPNPTTASLSLNIRMIF 115
           LF  FS     +L ++ +V L L P++P+F L +  +  + +T    +T  L+ ++++  
Sbjct: 27  LFFTFSTFFSGLLLIIFLVWLILHPERPEFSLTEADIYSLNLT--TSSTHLLNSSVQLTL 86

Query: 116 TAVNPN-KVGIKYGESRFTVMYRGIPL-GRASVPGFFQDPHSQRQVDATIAVDRVNLLQA 175
            + NPN KVGI Y +      YRG  +   AS+P F+Q       + A +    + + Q+
Sbjct: 87  FSKNPNKKVGIYYDKLLVYAAYRGQQITSEASLPPFYQSHEEINLLTAFLQGTELPVAQS 146

Query: 176 DAADLIRDASLNDRVELRILGDVAAKIRLLSFNSPGVQVSVDCAIVIS 222
               + R+ S   ++ + +  D   + ++ ++ S   + +V+C  +++
Sbjct: 147 FGYQISRERS-TGKIIIGMKMDGKLRWKIGTWVSGAYRFNVNCLAIVA 191

[Close]

BLAST of CaUC09G173410 vs. TAIR 10
Match: AT4G26490.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 45.4 bits (106), Expect = 7.3e-05
Identity = 41/160 (25.62%), Postives = 66/160 (41.25%), Query Frame = 0


Query: 41  PRSSSSASFKGCCCCLFLLFSFLALLILAVVLVVVLALKPKKPQFDLQQVGVQYMGITNP 100
           PRSS ++ +  C      +FS L +      L+V LA++P+ P FD+    +  +    P
Sbjct: 77  PRSSRTSLWIWCVAGFCFVFSLLLIFFAIATLIVFLAIRPRIPVFDIPNANLHTIYFDTP 136

Query: 101 NPTTASLSLNIRMIFTAVNPN-KVGIKYGESRFTVMYRGIPLGRASVPGFFQDPHSQRQV 160
                 LS    M+    NPN K+ +K+ + R  + +    +    V  F Q  H  R  
Sbjct: 137 EFFNGDLS----MLVNFTNPNKKIEVKFEKLRIELFFFNRLIAAQVVQPFLQKKHETRLE 196

Query: 161 DATIAVDRVNLLQADAADLIRDASLNDRVELRILGDVAAK 200
              +    V L    A +L R    N+++E  I G    K
Sbjct: 197 PIRLISSLVGLPVNHAVELRRQLE-NNKIEYEIRGTFKVK 231

The following BLAST results are available for this feature:

BLAST of CaUC09G173410 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038887420.1	1.9e-111	98.14	uncharacterized protein LOC120077562 [Benincasa hispida]	[more]
XP_008447191.1	2.5e-108	93.75	PREDICTED: uncharacterized protein LOC103489700 [Cucumis melo]	[more]
XP_004139805.1	1.8e-106	95.35	uncharacterized protein LOC101207234 [Cucumis sativus] >KGN44209.1 hypothetical ...	[more]
XP_022971998.1	5.1e-101	92.09	uncharacterized protein LOC111470648 [Cucurbita maxima]	[more]
KAG6571818.1	1.6e-99	91.67	NDR1/HIN1-like protein 13, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of CaUC09G173410 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FI03	7.8e-04	23.21	NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1	[more]

BLAST of CaUC09G173410 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BGU8	1.2e-108	93.75	uncharacterized protein LOC103489700 OS=Cucumis melo OX=3656 GN=LOC103489700 PE=...	[more]
A0A0A0K5H7	8.7e-107	95.35	LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G223380 PE=4 ...	[more]
A0A6J1I8L5	2.5e-101	92.09	uncharacterized protein LOC111470648 OS=Cucurbita maxima OX=3661 GN=LOC111470648...	[more]
A0A6J1GKY5	3.3e-98	89.50	uncharacterized protein LOC111455278 OS=Cucurbita moschata OX=3662 GN=LOC1114552...	[more]
A0A6J1EUX4	1.6e-97	87.22	uncharacterized protein LOC111437836 OS=Cucurbita moschata OX=3662 GN=LOC1114378...	[more]

BLAST of CaUC09G173410 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G01080.1	6.4e-86	72.81	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT3G54200.1	1.2e-07	23.64	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT1G17620.1	1.6e-07	23.58	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT5G53730.1	5.6e-05	23.21	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT4G26490.1	7.3e-05	25.63	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA_2 subgroup	PFAM	PF03168	LEA_2	coord: 117..216 e-value: 2.2E-11 score: 44.2
None	No IPR available	GENE3D	2.60.40.1820		coord: 77..214 e-value: 7.2E-6 score: 27.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..40
None	No IPR available	PANTHER	PTHR31234	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY	coord: 27..238
None	No IPR available	PANTHER	PTHR31234:SF8	EXPRESSED PROTEIN	coord: 27..238
None	No IPR available	SUPERFAMILY	117070	LEA14-like	coord: 64..196

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC09G173410.1	CaUC09G173410.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane